Clone Information

BLAST Search Result

Clone Name	bags19a24
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	TPM_PERAM (Q9UB83) Tropomyosin (Major allergen Per a 7)	33	0.33
2	TPM_PERFU (Q8T6L5) Tropomyosin	33	0.56
3	RBM28_HUMAN (Q9NW13) RNA-binding protein 28 (RNA-binding motif p...	33	0.56
4	GARP_PLAFF (P13816) Glutamic acid-rich protein precursor	32	0.73
5	CBF1_KLULA (P49379) Centromere-binding protein 1 (CBP-1) (Centro...	32	0.95
6	YNO4_YEAST (P53907) Hypothetical 84.2 kDa protein in MFA2-MEP2 i...	32	1.2
7	DCR1B_HUMAN (Q9H816) DNA cross-link repair 1B protein (hSNM1B)	32	1.2
8	HS32_DICDI (P54658) 32 kDa heat shock protein (4-1 protein)	32	1.2
9	PP4R2_KLULA (Q6CPD5) Serine/threonine-protein phosphatase 4 regu...	31	1.6
10	ARGD_BUCAP (P59086) Acetylornithine/succinyldiaminopimelate amin...	31	1.6
11	ANR12_HUMAN (Q6UB98) Ankyrin repeat domain-containing protein 12...	31	2.1
12	TPM1_CAEEL (Q22866) Tropomyosin isoforms 1/2	30	2.8
13	ARGD_BUCAI (P57600) Acetylornithine/succinyldiaminopimelate amin...	30	2.8
14	RAB21_GEOCY (Q8WQ53) Ras-related protein Rab-21	30	2.8
15	A4_TETFL (O73683) Amyloid beta A4 protein precursor (APP) (ABPP)...	30	2.8
16	CRTC2_BOVIN (P42918) Calreticulin, brain isoform 2 precursor (CR...	30	2.8
17	GYP7_DEBHA (Q6BU76) GTPase-activating protein GYP7 (GAP for YPT7)	30	3.6
18	YDWA_SCHPO (O13915) Hypothetical protein C23C11.10 in chromosome I	30	3.6
19	ECEL1_HUMAN (O95672) Endothelin-converting enzyme-like 1 (EC 3.4...	30	3.6
20	CBP_HUMAN (Q92793) CREB-binding protein (EC 2.3.1.48)	30	3.6
21	NUCL_MOUSE (P09405) Nucleolin (Protein C23)	30	3.6
22	CP306_DROME (Q9VWR5) Cytochrome P450 306a1 (EC 1.14.-.-) (CYPCCC...	30	4.7
23	ENPL_CHICK (P08110) Endoplasmin precursor (Heat shock protein 90...	30	4.7
24	CLS2_BACCR (Q81GK4) Cardiolipin synthetase 2 (EC 2.7.8.-) (Cardi...	30	4.7
25	CLS2_BACAN (Q81TR2) Cardiolipin synthetase 2 (EC 2.7.8.-) (Cardi...	30	4.7
26	ARI3A_HUMAN (Q99856) AT-rich interactive domain-containing prote...	30	4.7
27	CRTC1_BOVIN (P52193) Calreticulin, brain isoform 1 precursor (CR...	30	4.7
28	RSE1_ASPFU (Q4WLI5) Pre-mRNA-splicing factor rse1	30	4.7
29	PESC_MOUSE (Q9EQ61) Pescadillo homolog 1	30	4.7
30	MYST4_MACFA (Q8WML3) Histone acetyltransferase MYST4 (EC 2.3.1.4...	30	4.7
31	CYK3_YEAST (Q07533) Cytokinesis protein 3	30	4.7
32	CENPB_CRIGR (P48988) Major centromere autoantigen B (Centromere ...	30	4.7
33	SPT5H_DROME (Q9V460) Transcription elongation factor SPT5 (dSpt5...	29	6.2
34	BFR2_NEUCR (Q7S6P8) Protein bfr-2	29	6.2
35	MYST4_HUMAN (Q8WYB5) Histone acetyltransferase MYST4 (EC 2.3.1.4...	29	6.2
36	IPO7_MOUSE (Q9EPL8) Importin-7 (Imp7) (Ran-binding protein 7) (R...	29	6.2
37	CAC1F_HUMAN (O60840) Voltage-dependent L-type calcium channel al...	29	6.2
38	SKPL_CHLPN (Q9Z8N7) Skp-like protein precursor	29	6.2
39	RSE1_EMENI (Q5B1X8) Pre-mRNA-splicing factor rse1	29	6.2
40	CCD50_CHICK (Q5ZM86) Coiled-coil domain-containing protein 50	29	6.2
41	SPS_ORYSA (Q43802) Sucrose-phosphate synthase (EC 2.4.1.14) (UDP...	29	6.2
42	SA155_YEAST (P43612) SIT4-associating protein SAP155	29	6.2
43	RPOD_HAEIN (P43766) RNA polymerase sigma factor rpoD (Sigma-70)	29	6.2
44	YBY1_YEAST (P38273) Protein YBR131W	29	8.1
45	RAB21_MOUSE (P35282) Ras-related protein Rab-21 (Rab-12)	29	8.1
46	TOPRS_DROME (Q9V8P9) Ubiquitin-protein E3 ligase Topors (EC 6.3....	29	8.1
47	MSL1_DROME (P50535) Protein male-specific lethal-1	29	8.1
48	TOM22_YEAST (P49334) Mitochondrial import receptor subunit TOM22...	29	8.1
49	RAB21_HUMAN (Q9UL25) Ras-related protein Rab-21	29	8.1
50	ARI1B_HUMAN (Q8NFD5) AT-rich interactive domain-containing prote...	29	8.1
51	RAB21_CANFA (P55745) Ras-related protein Rab-21	29	8.1
52	LEU11_ARCFU (O29305) 2-isopropylmalate synthase 1 (EC 2.3.3.13) ...	29	8.1
53	DSPP_MOUSE (P97399) Dentin sialophosphoprotein precursor (Dentin...	29	8.1
54	CF060_HUMAN (Q8NB25) Protein C6orf60	29	8.1
55	PCNT_HUMAN (O95613) Pericentrin (Pericentrin B) (Kendrin)	29	8.1
56	HSP3_MOUSE (Q62100) Sperm protamine P3	29	8.1

>TPM_PERAM (Q9UB83) Tropomyosin (Major allergen Per a 7)|
          Length = 284

 Score = 33.5 bits (75), Expect = 0.33
 Identities = 39/142 (27%), Positives = 57/142 (40%), Gaps = 11/142 (7%)
 Frame = +3

Query: 99  QQCEDKFNDLNKRYKRLTDILGRGTACCVVENPXLLDSMHNLSDKMKEDARKILNSKHLF 278
           Q  E +   LN+R + L + L R           L ++   + +   E ARKIL SK L 
Sbjct: 79  QNAESEVAALNRRIQLLEEDLERSEERLATATAKLAEASQAVDES--ERARKILESKGLA 136

Query: 279 YEQMCSYHNNNRVNLPEDPALQHSLQVALRCKEEHDLRRD--------TSGDLEEDEQSA 434
            E+                AL++ L+ A    EE D + D           DLE  E+ A
Sbjct: 137 DEERMD-------------ALENQLKEARFMAEEADKKYDEVARKLAMVEADLERAEERA 183

Query: 435 DSDYE---EHDEERQTVHTNLR 491
           +S      E +EE + V  NL+
Sbjct: 184 ESGESKIVELEEELRVVGNNLK 205

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>TPM_PERFU (Q8T6L5) Tropomyosin|
          Length = 284

 Score = 32.7 bits (73), Expect = 0.56
 Identities = 39/142 (27%), Positives = 56/142 (39%), Gaps = 11/142 (7%)
 Frame = +3

Query: 99  QQCEDKFNDLNKRYKRLTDILGRGTACCVVENPXLLDSMHNLSDKMKEDARKILNSKHLF 278
           Q  E +   LN+R + L + L R           L ++     +   E ARKIL SK L 
Sbjct: 79  QNAESEVAALNRRIQLLEEDLERSEERLATATAKLAEASQAADES--ERARKILESKGLA 136

Query: 279 YEQMCSYHNNNRVNLPEDPALQHSLQVALRCKEEHDLRRD--------TSGDLEEDEQSA 434
            E+                AL++ L+ A    EE D + D           DLE  E+ A
Sbjct: 137 DEERMD-------------ALENQLKEARFMAEEADKKYDEVARKLAMVEADLERAEERA 183

Query: 435 DSDYE---EHDEERQTVHTNLR 491
           +S      E +EE + V  NL+
Sbjct: 184 ESGESKIVELEEELRVVGNNLK 205

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>RBM28_HUMAN (Q9NW13) RNA-binding protein 28 (RNA-binding motif protein 28)|
          Length = 758

 Score = 32.7 bits (73), Expect = 0.56
 Identities = 11/49 (22%), Positives = 27/49 (55%)
 Frame = +3

Query: 342 QHSLQVALRCKEEHDLRRDTSGDLEEDEQSADSDYEEHDEERQTVHTNL 488
           +H   V  + +EE D+  + + D ++D+   D  +++ DEE + + + +
Sbjct: 212 KHQESVKKKGREEEDMEEEENDDDDDDDDEEDGVFDDEDEEEENIESKV 260

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>GARP_PLAFF (P13816) Glutamic acid-rich protein precursor|
          Length = 678

 Score = 32.3 bits (72), Expect = 0.73
 Identities = 14/42 (33%), Positives = 23/42 (54%)
 Frame = +3

Query: 375 EEHDLRRDTSGDLEEDEQSADSDYEEHDEERQTVHTNLRDSS 500
           EE D   D   D +EDE+  + + EE +E  + +  NLR ++
Sbjct: 635 EEDDDEEDDDEDEDEDEEDEEEEEEEEEESEKKIKRNLRKNA 676



 Score = 29.3 bits (64), Expect = 6.2
 Identities = 12/33 (36%), Positives = 21/33 (63%)
 Frame = +3

Query: 372 KEEHDLRRDTSGDLEEDEQSADSDYEEHDEERQ 470
           KEE    ++ S +++EDE+  + D EE +EE +
Sbjct: 552 KEESKEVQEESKEVQEDEEEVEEDEEEEEEEEE 584

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>CBF1_KLULA (P49379) Centromere-binding protein 1 (CBP-1) (Centromere-binding|
           factor 1) (Centromere promoter factor 1)
          Length = 359

 Score = 32.0 bits (71), Expect = 0.95
 Identities = 23/91 (25%), Positives = 44/91 (48%), Gaps = 2/91 (2%)
 Frame = +3

Query: 228 DKMKEDARKILN--SKHLFYEQMCSYHNNNRVNLPEDPALQHSLQVALRCKEEHDLRRDT 401
           DK+ +D   ++   S+    EQ  +  N+  +N+  DP++      A+    +H  +R  
Sbjct: 64  DKVGDDEHDVVKGESEGQAAEQSSADQNDENINVDVDPSV-----TAVARAAQHASQRRE 118

Query: 402 SGDLEEDEQSADSDYEEHDEERQTVHTNLRD 494
           +GD +EDE       +E +EE +  H ++ D
Sbjct: 119 AGDEDEDE-------DEEEEEDEDDHVDIDD 142

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>YNO4_YEAST (P53907) Hypothetical 84.2 kDa protein in MFA2-MEP2 intergenic|
           region
          Length = 740

 Score = 31.6 bits (70), Expect = 1.2
 Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 3/38 (7%)
 Frame = +3

Query: 360 ALRCKEEHDLRR---DTSGDLEEDEQSADSDYEEHDEE 464
           A R   E  L R   D +GD ++DE   D++YEE DE+
Sbjct: 537 AERTNREEKLNRGNEDVNGDEDDDEDEDDANYEEDDED 574

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>DCR1B_HUMAN (Q9H816) DNA cross-link repair 1B protein (hSNM1B)|
          Length = 532

 Score = 31.6 bits (70), Expect = 1.2
 Identities = 13/39 (33%), Positives = 22/39 (56%)
 Frame = -2

Query: 495 NPSSWYELFDALHHAPRNQNLHSAHPLQDLHLYPSSDHA 379
           N   W +    +   P ++ +HS+HP  D+H+ P SDH+
Sbjct: 241 NMLRWNQTHPTIAILPTSRKIHSSHP--DIHVIPYSDHS 277

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>HS32_DICDI (P54658) 32 kDa heat shock protein (4-1 protein)|
          Length = 281

 Score = 31.6 bits (70), Expect = 1.2
 Identities = 10/36 (27%), Positives = 21/36 (58%)
 Frame = +3

Query: 369 CKEEHDLRRDTSGDLEEDEQSADSDYEEHDEERQTV 476
           C +EH +  +   +++ DE+  DSD +E D + + +
Sbjct: 133 CDDEHCINHEDDEEIDSDEEFGDSDQDEEDSDDEEI 168

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>PP4R2_KLULA (Q6CPD5) Serine/threonine-protein phosphatase 4 regulatory subunit|
           2 (PP4R2)
          Length = 402

 Score = 31.2 bits (69), Expect = 1.6
 Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 8/48 (16%)
 Frame = +3

Query: 378 EHDLRR--DTSGDL------EEDEQSADSDYEEHDEERQTVHTNLRDS 497
           +HD+ R  D  GD+      E DE+  D DYE+H++E +       DS
Sbjct: 185 DHDIGRGYDNHGDVLIEEYEEMDEEFEDEDYEDHEDEEEDEEDEDNDS 232

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>ARGD_BUCAP (P59086) Acetylornithine/succinyldiaminopimelate aminotransferase|
           (EC 2.6.1.11) (EC 2.6.1.17) (ACOAT)
           (Succinyldiaminopimelate transferase) (DapATase)
          Length = 404

 Score = 31.2 bits (69), Expect = 1.6
 Identities = 13/37 (35%), Positives = 22/37 (59%)
 Frame = +3

Query: 114 KFNDLNKRYKRLTDILGRGTACCVVENPXLLDSMHNL 224
           + N +NKR+   T+I G+G    +V  P L + +HN+
Sbjct: 321 ELNIINKRFGLFTEIRGKGLLIGIVLRPELSEEIHNI 357

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>ANR12_HUMAN (Q6UB98) Ankyrin repeat domain-containing protein 12 (Ankyrin|
            repeat-containing cofactor 2) (GAC-1 protein)
          Length = 2062

 Score = 30.8 bits (68), Expect = 2.1
 Identities = 25/95 (26%), Positives = 44/95 (46%), Gaps = 1/95 (1%)
 Frame = +3

Query: 204  LDSMHNLSDKMKEDARKILNSKHLFYEQMCSYHNNNRVNLPEDPALQHSLQVALRCKEEH 383
            LD      DK   ++  I NSKH+  E+  S  + N+         QH   ++L+ K + 
Sbjct: 958  LDKKEKSRDK---ESINITNSKHIQEEKKSSIVDGNKA--------QHEKPLSLKEKTKD 1006

Query: 384  DLRRDTSGDLEEDEQSADSD-YEEHDEERQTVHTN 485
            +  +   G  E+D++  D D Y+E D+ +  +  N
Sbjct: 1007 EPLKTPDGK-EKDKKDKDIDRYKERDKHKDKIQIN 1040

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>TPM1_CAEEL (Q22866) Tropomyosin isoforms 1/2|
          Length = 284

 Score = 30.4 bits (67), Expect = 2.8
 Identities = 33/142 (23%), Positives = 58/142 (40%), Gaps = 11/142 (7%)
 Frame = +3

Query: 99  QQCEDKFNDLNKRYKRLTDILGRGTACCVVENPXLLDSMHNLSDKMKEDARKILNSKHLF 278
           Q+ E +   LN+R   L + L R      +    L ++ HN+ +   E  RK++ ++ L 
Sbjct: 79  QEAEAEVASLNRRMTLLEEELERAEERLKIATEKLEEATHNVDE--SERVRKVMENRSLQ 136

Query: 279 YEQMCSYHNNNRVNLPEDPALQHSLQVALRCKEEHDLRRD--------TSGDLEEDEQSA 434
            E+  +              ++  L+ A    EE D + D           DLE  E+ A
Sbjct: 137 DEERAN-------------TVEAQLKEAQLLAEEADRKYDEVARKLAMVEADLERAEERA 183

Query: 435 DSDYE---EHDEERQTVHTNLR 491
           ++      E +EE + V  NL+
Sbjct: 184 EAGENKIVELEEELRVVGNNLK 205

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>ARGD_BUCAI (P57600) Acetylornithine/succinyldiaminopimelate aminotransferase|
           (EC 2.6.1.11) (EC 2.6.1.17) (ACOAT)
           (Succinyldiaminopimelate transferase) (DapATase)
          Length = 408

 Score = 30.4 bits (67), Expect = 2.8
 Identities = 13/37 (35%), Positives = 22/37 (59%)
 Frame = +3

Query: 114 KFNDLNKRYKRLTDILGRGTACCVVENPXLLDSMHNL 224
           + N +NKR+K  T+I GRG    +V  P +  ++H +
Sbjct: 321 ELNIINKRFKLFTEIRGRGLLIGIVLKPNVSRNIHKI 357

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>RAB21_GEOCY (Q8WQ53) Ras-related protein Rab-21|
          Length = 229

 Score = 30.4 bits (67), Expect = 2.8
 Identities = 16/57 (28%), Positives = 26/57 (45%)
 Frame = +3

Query: 108 EDKFNDLNKRYKRLTDILGRGTACCVVENPXLLDSMHNLSDKMKEDARKILNSKHLF 278
           ED F+      K L  +LG     C+V N   LD    +S+K   +  + + +KH +
Sbjct: 101 EDSFHKARNWIKELKRMLGDKVTLCIVGNKIDLDRQRTVSEKDALEYAESVGAKHYY 157

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>A4_TETFL (O73683) Amyloid beta A4 protein precursor (APP) (ABPP) (Alzheimer|
           disease amyloid A4 A4 protein homolog) [Contains:
           Beta-amyloid protein (Beta-APP) (A-beta)]
          Length = 780

 Score = 30.4 bits (67), Expect = 2.8
 Identities = 14/29 (48%), Positives = 18/29 (62%)
 Frame = +3

Query: 372 KEEHDLRRDTSGDLEEDEQSADSDYEEHD 458
           +EE  L  D  GD EED ++AD + EE D
Sbjct: 255 EEEEVLDTDQDGDGEEDHEAADDEEEEED 283

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>CRTC2_BOVIN (P42918) Calreticulin, brain isoform 2 precursor (CRP55)|
           (Calregulin) (HACBP)
          Length = 421

 Score = 30.4 bits (67), Expect = 2.8
 Identities = 13/40 (32%), Positives = 21/40 (52%)
 Frame = +3

Query: 345 HSLQVALRCKEEHDLRRDTSGDLEEDEQSADSDYEEHDEE 464
           H  +   + KEE +  +D   D +EDE+  D   EE +E+
Sbjct: 372 HEEEEEKKGKEEEEAEKDDDEDKDEDEEDEDEKEEEEEED 411

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>GYP7_DEBHA (Q6BU76) GTPase-activating protein GYP7 (GAP for YPT7)|
          Length = 757

 Score = 30.0 bits (66), Expect = 3.6
 Identities = 18/87 (20%), Positives = 41/87 (47%)
 Frame = +3

Query: 27  IVQKKGKWKAISKVMGERGCSVSPQQCEDKFNDLNKRYKRLTDILGRGTACCVVENPXLL 206
           I Q   ++  + K M +   +++      +   L  R++R+ DI+ R  +   + NP + 
Sbjct: 661 IRQNLSRFDEVLKYMNDLSMNMNLNHLLIRAELLFLRFRRMIDIIDRENSLKKLNNPGVY 720

Query: 207 DSMHNLSDKMKEDARKILNSKHLFYEQ 287
           D  +N   K+    R++L+ K +  ++
Sbjct: 721 DDANNSLIKISPALRELLSKKPVIQKE 747

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>YDWA_SCHPO (O13915) Hypothetical protein C23C11.10 in chromosome I|
          Length = 265

 Score = 30.0 bits (66), Expect = 3.6
 Identities = 13/29 (44%), Positives = 19/29 (65%)
 Frame = +3

Query: 219 NLSDKMKEDARKILNSKHLFYEQMCSYHN 305
           +LS K+K+  R+ LNS+  F   +CS HN
Sbjct: 75  DLSKKVKKGIREFLNSQSRFQSLLCSEHN 103

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>ECEL1_HUMAN (O95672) Endothelin-converting enzyme-like 1 (EC 3.4.24.-) (Xce|
           protein)
          Length = 775

 Score = 30.0 bits (66), Expect = 3.6
 Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
 Frame = +3

Query: 240 EDARKILNSKHLFYEQMCSYHNNNRVNLPEDPALQHSLQVA-LRCKEEHDLRRDTS 404
           ED+ KIL +  +F E++ S    + V       LQ   Q+A +   E  DLRRD S
Sbjct: 281 EDSEKILAAYRVFMERVLSLLGADAVEQKAQEILQVEQQLANITVSEHDDLRRDVS 336

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>CBP_HUMAN (Q92793) CREB-binding protein (EC 2.3.1.48)|
          Length = 2442

 Score = 30.0 bits (66), Expect = 3.6
 Identities = 15/50 (30%), Positives = 24/50 (48%)
 Frame = +3

Query: 324  PEDPALQHSLQVALRCKEEHDLRRDTSGDLEEDEQSADSDYEEHDEERQT 473
            P    ++  LQ A + KEE D+    S  +E DE+  +   E  +EE  +
Sbjct: 1017 PRSEMMEEDLQGASQVKEETDIAEQKSEPMEVDEKKPEVKVEVKEEEESS 1066

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>NUCL_MOUSE (P09405) Nucleolin (Protein C23)|
          Length = 706

 Score = 30.0 bits (66), Expect = 3.6
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = +3

Query: 372 KEEHDLRRDTSGDLEEDEQSADSDYEEHDEERQTV 476
           +EE D   D   + E+DE+  D D +E +EE + V
Sbjct: 240 EEEDDEEEDEDDEDEDDEEEDDEDDDEEEEEEEPV 274

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>CP306_DROME (Q9VWR5) Cytochrome P450 306a1 (EC 1.14.-.-) (CYPCCCVIA1) (Phantom|
           protein) (Dmphm)
          Length = 574

 Score = 29.6 bits (65), Expect = 4.7
 Identities = 22/83 (26%), Positives = 34/83 (40%)
 Frame = +3

Query: 216 HNLSDKMKEDARKILNSKHLFYEQMCSYHNNNRVNLPEDPALQHSLQVALRCKEEHDLRR 395
           H + D++ E   + L  K   +++           L E   LQ  L       E+  LR+
Sbjct: 268 HAIYDRIVEACGQRLKEKQKVFKE-----------LQEQKRLQRQL-------EKEQLRQ 309

Query: 396 DTSGDLEEDEQSADSDYEEHDEE 464
               D  +++  AD D EE DEE
Sbjct: 310 SKEADPSQEQSEADEDDEESDEE 332

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>ENPL_CHICK (P08110) Endoplasmin precursor (Heat shock protein 90 kDa beta|
           member 1) (Heat shock 108 kDa protein) (HSP108) (HSP
           108) (Transferrin-binding protein)
          Length = 795

 Score = 29.6 bits (65), Expect = 4.7
 Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
 Frame = +3

Query: 339 LQHSLQVALRCK--EEHDLRRDTSGDLEEDEQSADSDYEEHDEERQTVHTNLRD 494
           L+ SL + L  K  EE +   D + + E+DE+  D+D E  D E Q   T+++D
Sbjct: 742 LRLSLNIDLDAKVEEEPEEPEDAAEEAEQDEEEVDADAE--DSETQKESTDVKD 793

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>CLS2_BACCR (Q81GK4) Cardiolipin synthetase 2 (EC 2.7.8.-) (Cardiolipin|
           synthase 2) (CL synthase 2)
          Length = 514

 Score = 29.6 bits (65), Expect = 4.7
 Identities = 10/31 (32%), Positives = 22/31 (70%)
 Frame = +1

Query: 136 DIKGLQISLVVALLAVLWKIXHFLIACIIFL 228
           D+ G++   ++ ++++L+ +  FLI C+IFL
Sbjct: 32  DVIGIKDVSILGIISILFTVSAFLIGCVIFL 62

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>CLS2_BACAN (Q81TR2) Cardiolipin synthetase 2 (EC 2.7.8.-) (Cardiolipin|
           synthase 2) (CL synthase 2)
          Length = 514

 Score = 29.6 bits (65), Expect = 4.7
 Identities = 10/31 (32%), Positives = 22/31 (70%)
 Frame = +1

Query: 136 DIKGLQISLVVALLAVLWKIXHFLIACIIFL 228
           D+ G++   ++ ++++L+ +  FLI C+IFL
Sbjct: 32  DVIGIKDVSILGIISILFTVSAFLIGCVIFL 62

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>ARI3A_HUMAN (Q99856) AT-rich interactive domain-containing protein 3A (ARID|
           domain-containing protein 3A) (B-cell regulator of IgH
           transcription) (Bright) (E2F-binding protein 1)
          Length = 593

 Score = 29.6 bits (65), Expect = 4.7
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = +3

Query: 375 EEHDLRRDTSGDLEEDEQSADSDYEEHDEE 464
           EE ++  D   D EE+E+  + + EE DEE
Sbjct: 128 EEEEMEEDLGEDEEEEEEDYEDEEEEEDEE 157

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>CRTC1_BOVIN (P52193) Calreticulin, brain isoform 1 precursor (CRP55)|
           (Calregulin) (HACBP)
          Length = 417

 Score = 29.6 bits (65), Expect = 4.7
 Identities = 13/40 (32%), Positives = 21/40 (52%)
 Frame = +3

Query: 345 HSLQVALRCKEEHDLRRDTSGDLEEDEQSADSDYEEHDEE 464
           H  +   + KEE +  +D   D +EDE+  D   EE +E+
Sbjct: 368 HEEEEEKKGKEEEEADKDDDEDKDEDEEDEDEKEEEEEED 407

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>RSE1_ASPFU (Q4WLI5) Pre-mRNA-splicing factor rse1|
          Length = 1225

 Score = 29.6 bits (65), Expect = 4.7
 Identities = 21/55 (38%), Positives = 26/55 (47%)
 Frame = +3

Query: 306 NNRVNLPEDPALQHSLQVALRCKEEHDLRRDTSGDLEEDEQSADSDYEEHDEERQ 470
           + RVN  E PA QH   VA    E       +SG++   E  AD    E+DE RQ
Sbjct: 546 DRRVN--EWPAPQHRSIVAAATNERQVAVALSSGEIVYFEMDADGTLAEYDERRQ 598

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>PESC_MOUSE (Q9EQ61) Pescadillo homolog 1|
          Length = 584

 Score = 29.6 bits (65), Expect = 4.7
 Identities = 12/36 (33%), Positives = 19/36 (52%)
 Frame = +3

Query: 372 KEEHDLRRDTSGDLEEDEQSADSDYEEHDEERQTVH 479
           +EE D   D  GD+  + +  D + E  +EE + VH
Sbjct: 456 EEEEDEDDDNEGDVAAENEEEDVEVESEEEEEEEVH 491

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>MYST4_MACFA (Q8WML3) Histone acetyltransferase MYST4 (EC 2.3.1.48) (EC 2.3.1.-)|
           (MYST protein 4) (MOZ, YBF2/SAS3, SAS2 and TIP60 protein
           4)
          Length = 1784

 Score = 29.6 bits (65), Expect = 4.7
 Identities = 12/42 (28%), Positives = 23/42 (54%)
 Frame = +3

Query: 372 KEEHDLRRDTSGDLEEDEQSADSDYEEHDEERQTVHTNLRDS 497
           +EE D   +   + EE+E+  + + EE +EE +    N++ S
Sbjct: 782 EEEEDEEEEDEEEEEEEEEDEEEEEEEEEEEEEEEEENIQSS 823

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>CYK3_YEAST (Q07533) Cytokinesis protein 3|
          Length = 885

 Score = 29.6 bits (65), Expect = 4.7
 Identities = 11/36 (30%), Positives = 23/36 (63%)
 Frame = +3

Query: 219 NLSDKMKEDARKILNSKHLFYEQMCSYHNNNRVNLP 326
           +L+   K  +++++N K+++  Q   +HNN+  NLP
Sbjct: 129 SLTKARKAKSKEMVNEKNIYNTQSSRHHNNSAPNLP 164

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>CENPB_CRIGR (P48988) Major centromere autoantigen B (Centromere protein B)|
           (CENP-B)
          Length = 606

 Score = 29.6 bits (65), Expect = 4.7
 Identities = 13/40 (32%), Positives = 20/40 (50%)
 Frame = +3

Query: 345 HSLQVALRCKEEHDLRRDTSGDLEEDEQSADSDYEEHDEE 464
           +S+Q   +C   H L      D + DE+  D + +E DEE
Sbjct: 496 YSVQEEAQCPTLHFLEGGEDSDSDSDEEEEDEEEDEEDEE 535

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>SPT5H_DROME (Q9V460) Transcription elongation factor SPT5 (dSpt5) (DRB|
           sensitivity-inducing factor large subunit) (DSIF large
           subunit)
          Length = 1078

 Score = 29.3 bits (64), Expect = 6.2
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = +3

Query: 390 RRDTSGDLEEDEQSADSDYEEHDEERQTVH 479
           + D SG+ EE+    D D EE+DEE    H
Sbjct: 72  KSDESGEEEEEPPGEDIDSEEYDEEENDDH 101

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>BFR2_NEUCR (Q7S6P8) Protein bfr-2|
          Length = 636

 Score = 29.3 bits (64), Expect = 6.2
 Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 5/45 (11%)
 Frame = +3

Query: 372 KEEHDLRRDTSGDLEEDEQSADSDYEEHDE-----ERQTVHTNLR 491
           +E+ +   + SGD +EDE   D D +E DE     E+  V+  LR
Sbjct: 262 EEDDEDDEEGSGDEDEDEDDEDEDEDEDDESGDDDEKNDVNAELR 306

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>MYST4_HUMAN (Q8WYB5) Histone acetyltransferase MYST4 (EC 2.3.1.48) (EC 2.3.1.-)|
            (MYST protein 4) (MOZ, YBF2/SAS3, SAS2 and TIP60 protein
            4) (Histone acetyltransferase MOZ2) (Monocytic leukemia
            zinc finger protein-related factor) (Histone
            acetyltransferas
          Length = 2073

 Score = 29.3 bits (64), Expect = 6.2
 Identities = 12/40 (30%), Positives = 22/40 (55%)
 Frame = +3

Query: 351  LQVALRCKEEHDLRRDTSGDLEEDEQSADSDYEEHDEERQ 470
            L+++    EE +   D   + EE+E+  D + EE +EE +
Sbjct: 1062 LELSKESSEEEEEEEDEEEEEEEEEEEEDEEEEEEEEEEE 1101

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>IPO7_MOUSE (Q9EPL8) Importin-7 (Imp7) (Ran-binding protein 7) (RanBP7)|
          Length = 1038

 Score = 29.3 bits (64), Expect = 6.2
 Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
 Frame = +3

Query: 321  LPEDPALQHSLQVALRCKEEHDLRRDTSGDLEEDEQSAD--SDYEEHDEERQ 470
            LP    L + L+ A  C  EH+   D   D E+D+++ +  SD ++ DE+ Q
Sbjct: 862  LPAFILLFNGLKRAYACHAEHENDSDDDEDAEDDDETEELGSDEDDIDEDGQ 913

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>CAC1F_HUMAN (O60840) Voltage-dependent L-type calcium channel alpha-1F subunit|
           (Voltage-gated calcium channel alpha subunit Cav1.4)
          Length = 1966

 Score = 29.3 bits (64), Expect = 6.2
 Identities = 16/53 (30%), Positives = 29/53 (54%)
 Frame = +3

Query: 306 NNRVNLPEDPALQHSLQVALRCKEEHDLRRDTSGDLEEDEQSADSDYEEHDEE 464
           +N  +LP++      L   +  +EE   RR+   D+EE+E+  + + EE +EE
Sbjct: 766 SNEKDLPQE---NEGLVPGVEKEEEEGARRE-GADMEEEEEEEEEEEEEEEEE 814

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>SKPL_CHLPN (Q9Z8N7) Skp-like protein precursor|
          Length = 171

 Score = 29.3 bits (64), Expect = 6.2
 Identities = 14/43 (32%), Positives = 25/43 (58%)
 Frame = +3

Query: 366 RCKEEHDLRRDTSGDLEEDEQSADSDYEEHDEERQTVHTNLRD 494
           RC EE DL +  + +LE  +Q    + E+ +EE  +++  L+D
Sbjct: 30  RCLEESDLGKKETEELEAMKQQFVKNAEKIEEELTSIYNKLQD 72

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>RSE1_EMENI (Q5B1X8) Pre-mRNA-splicing factor rse1|
          Length = 1226

 Score = 29.3 bits (64), Expect = 6.2
 Identities = 21/55 (38%), Positives = 26/55 (47%)
 Frame = +3

Query: 306 NNRVNLPEDPALQHSLQVALRCKEEHDLRRDTSGDLEEDEQSADSDYEEHDEERQ 470
           + RVN  E PA QH   VA    E       +SG++   E  AD    E+DE RQ
Sbjct: 546 DRRVN--EWPAPQHRSIVAAATNERQVAVALSSGEIVYFELDADGSLAEYDERRQ 598

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>CCD50_CHICK (Q5ZM86) Coiled-coil domain-containing protein 50|
          Length = 301

 Score = 29.3 bits (64), Expect = 6.2
 Identities = 20/65 (30%), Positives = 27/65 (41%)
 Frame = +3

Query: 270 HLFYEQMCSYHNNNRVNLPEDPALQHSLQVALRCKEEHDLRRDTSGDLEEDEQSADSDYE 449
           H   EQ   +H     N+  +  +QH LQVA + +EE DL+           Q    D E
Sbjct: 31  HNLQEQEIEHHL--ATNIQRNRLVQHDLQVAKQLQEEEDLK------ARAQIQKRQKDLE 82

Query: 450 EHDEE 464
             D E
Sbjct: 83  RQDSE 87

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>SPS_ORYSA (Q43802) Sucrose-phosphate synthase (EC 2.4.1.14)|
           (UDP-glucose-fructose-phosphate glucosyltransferase)
          Length = 1049

 Score = 29.3 bits (64), Expect = 6.2
 Identities = 13/28 (46%), Positives = 20/28 (71%)
 Frame = +3

Query: 339 LQHSLQVALRCKEEHDLRRDTSGDLEED 422
           L+  L+++ R KE+  +RR+TS DL ED
Sbjct: 107 LEGILRISARRKEQEQVRRETSEDLAED 134

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>SA155_YEAST (P43612) SIT4-associating protein SAP155|
          Length = 1002

 Score = 29.3 bits (64), Expect = 6.2
 Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 9/51 (17%)
 Frame = +3

Query: 339 LQHSLQVAL---------RCKEEHDLRRDTSGDLEEDEQSADSDYEEHDEE 464
           L H LQ AL         + K +H   RDT  DL+ +    D+D  ++D+E
Sbjct: 592 LSHHLQDALNDLSIEEKEQLKTKHSPTRDTDHDLKNNNGKIDNDNNDNDDE 642

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>RPOD_HAEIN (P43766) RNA polymerase sigma factor rpoD (Sigma-70)|
          Length = 629

 Score = 29.3 bits (64), Expect = 6.2
 Identities = 12/42 (28%), Positives = 26/42 (61%)
 Frame = +3

Query: 375 EEHDLRRDTSGDLEEDEQSADSDYEEHDEERQTVHTNLRDSS 500
           EEH+   +   D +++E+S+++D E++++E      +  DSS
Sbjct: 181 EEHNGLDEDFSDEDDEEESSNADVEDNEDEEDNESESTSDSS 222

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>YBY1_YEAST (P38273) Protein YBR131W|
          Length = 704

 Score = 28.9 bits (63), Expect = 8.1
 Identities = 21/85 (24%), Positives = 36/85 (42%)
 Frame = +3

Query: 216 HNLSDKMKEDARKILNSKHLFYEQMCSYHNNNRVNLPEDPALQHSLQVALRCKEEHDLRR 395
           + L      D   + +  +  Y   C+Y   +   L  +   +  LQV    +EE +  R
Sbjct: 236 YGLVRNFTSDLNTLPDISNWLYHLHCTYGEISSHILTGNVHFKEELQV----EEEQERSR 291

Query: 396 DTSGDLEEDEQSADSDYEEHDEERQ 470
           DT+G   ++E+S +    EH E  Q
Sbjct: 292 DTNG--RDEEESQEQQRREHQETTQ 314

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>RAB21_MOUSE (P35282) Ras-related protein Rab-21 (Rab-12)|
          Length = 221

 Score = 28.9 bits (63), Expect = 8.1
 Identities = 18/71 (25%), Positives = 30/71 (42%)
 Frame = +3

Query: 108 EDKFNDLNKRYKRLTDILGRGTACCVVENPXLLDSMHNLSDKMKEDARKILNSKHLFYEQ 287
           ED F  +    K L  +LG     C+V N   L+   ++S +  E   + + +KH     
Sbjct: 101 EDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEKERHVSIQEAESYAESVGAKH----- 155

Query: 288 MCSYHNNNRVN 320
              YH + + N
Sbjct: 156 ---YHTSAKQN 163

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>TOPRS_DROME (Q9V8P9) Ubiquitin-protein E3 ligase Topors (EC 6.3.2.-)|
            (SUMO1-protein E3 ligase Topors) (Topoisomerase I-binding
            RING finger protein) (Topoisomerase I-binding
            arginine/serine-rich protein) (dTopors)
          Length = 1038

 Score = 28.9 bits (63), Expect = 8.1
 Identities = 11/30 (36%), Positives = 18/30 (60%)
 Frame = +3

Query: 372  KEEHDLRRDTSGDLEEDEQSADSDYEEHDE 461
            +EE D   + + + EE+E+  D D + HDE
Sbjct: 999  QEEDDQEEEKAAEEEEEEEEDDDDSDNHDE 1028

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>MSL1_DROME (P50535) Protein male-specific lethal-1|
          Length = 1039

 Score = 28.9 bits (63), Expect = 8.1
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = +3

Query: 375 EEHDLRRDTSGDLEEDEQSADSDYEEHDEE 464
           EEH    D +G +EED+   D D E  D++
Sbjct: 355 EEHGQSVDANGHIEEDDDEDDEDDENSDKD 384

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>TOM22_YEAST (P49334) Mitochondrial import receptor subunit TOM22 (Mitochondrial|
           22 kDa outer membrane protein) (Translocase of outer
           membrane 22 kDa subunit) (Protein MAS17) (Mitochondrial
           17 kDa assembly protein)
          Length = 151

 Score = 28.9 bits (63), Expect = 8.1
 Identities = 10/26 (38%), Positives = 19/26 (73%)
 Frame = +3

Query: 399 TSGDLEEDEQSADSDYEEHDEERQTV 476
           T+ D+ +DE  +DSD+E+  +E +T+
Sbjct: 32  TNNDVVDDEDDSDSDFEDEFDENETL 57

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>RAB21_HUMAN (Q9UL25) Ras-related protein Rab-21|
          Length = 224

 Score = 28.9 bits (63), Expect = 8.1
 Identities = 18/71 (25%), Positives = 30/71 (42%)
 Frame = +3

Query: 108 EDKFNDLNKRYKRLTDILGRGTACCVVENPXLLDSMHNLSDKMKEDARKILNSKHLFYEQ 287
           ED F  +    K L  +LG     C+V N   L+   ++S +  E   + + +KH     
Sbjct: 103 EDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEKERHVSIQEAESYAESVGAKH----- 157

Query: 288 MCSYHNNNRVN 320
              YH + + N
Sbjct: 158 ---YHTSAKQN 165

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>ARI1B_HUMAN (Q8NFD5) AT-rich interactive domain-containing protein 1B (ARID|
            domain-containing protein 1B) (Osa homolog 2) (hOsa2)
            (p250R) (BRG1-binding protein hELD/OSA1) (BRG1-associated
            factor 250b) (BAF250B)
          Length = 2236

 Score = 28.9 bits (63), Expect = 8.1
 Identities = 22/60 (36%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
 Frame = +3

Query: 324  PEDPALQHSLQVALRCKEEHDLRRDTSGDLEEDEQSADSDYE-EHDEERQTVHTNLRDSS 500
            P   AL H+   A R K++     D SG  EED +  D D E E DEE  +  T   + S
Sbjct: 1693 PSQKALDHN---AAR-KDDSQSLADDSGKEEEDAECIDDDEEDEEDEEEDSEKTESDEKS 1748

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>RAB21_CANFA (P55745) Ras-related protein Rab-21|
          Length = 222

 Score = 28.9 bits (63), Expect = 8.1
 Identities = 18/71 (25%), Positives = 30/71 (42%)
 Frame = +3

Query: 108 EDKFNDLNKRYKRLTDILGRGTACCVVENPXLLDSMHNLSDKMKEDARKILNSKHLFYEQ 287
           ED F  +    K L  +LG     C+V N   L+   ++S +  E   + + +KH     
Sbjct: 101 EDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEKERHVSIQEAESYAESVGAKH----- 155

Query: 288 MCSYHNNNRVN 320
              YH + + N
Sbjct: 156 ---YHTSAKQN 163

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>LEU11_ARCFU (O29305) 2-isopropylmalate synthase 1 (EC 2.3.3.13)|
           (Alpha-isopropylmalate synthase 1) (Alpha-IPM synthetase
           1)
          Length = 489

 Score = 28.9 bits (63), Expect = 8.1
 Identities = 13/54 (24%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
 Frame = +3

Query: 3   VGGRRNITIVQKKGKWKAISKVMGERGCSVSPQQCED---KFNDLNKRYKRLTD 155
           V GR+ + ++ K     ++  +M E G   +P+Q ++   +  ++  + KR+TD
Sbjct: 306 VVGRKRVIVLGKHAGRASVEAIMNELGYKATPEQMKEILARIKEIGDKGKRVTD 359

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>DSPP_MOUSE (P97399) Dentin sialophosphoprotein precursor (Dentin matrix|
           protein 3) (DMP-3) [Contains: Dentin phosphoprotein
           (Dentin phosphophoryn) (DPP); Dentin sialoprotein (DSP)]
          Length = 934

 Score = 28.9 bits (63), Expect = 8.1
 Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
 Frame = +3

Query: 378 EHDLRRDTSGDLEEDEQS-ADSDYEEHDEERQTVHTNLRDS 497
           E D   D+SGD + D     DS+ E+ DE   + H N  DS
Sbjct: 502 EDDSSDDSSGDGDSDSNGDGDSESEDKDESDSSDHDNSSDS 542

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>CF060_HUMAN (Q8NB25) Protein C6orf60|
          Length = 1020

 Score = 28.9 bits (63), Expect = 8.1
 Identities = 22/85 (25%), Positives = 39/85 (45%)
 Frame = +3

Query: 234 MKEDARKILNSKHLFYEQMCSYHNNNRVNLPEDPALQHSLQVALRCKEEHDLRRDTSGDL 413
           M    R  LN +H     +   HN+++        L+ S+ ++ R  +EH  R     DL
Sbjct: 697 MLASLRSELNHQHAAAIDLLR-HNHHQELAAAKMELERSIDISRRQSKEHICRIT---DL 752

Query: 414 EEDEQSADSDYEEHDEERQTVHTNL 488
           +E+ +  +    E D+E Q +H N+
Sbjct: 753 QEELRHREHHISELDKEVQHLHENI 777

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>PCNT_HUMAN (O95613) Pericentrin (Pericentrin B) (Kendrin)|
          Length = 3336

 Score = 28.9 bits (63), Expect = 8.1
 Identities = 18/84 (21%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
 Frame = +3

Query: 243 DARKILNSKHLFYEQMCSYHNNNRVNLPEDPALQHSLQVALRC-KEEHDLRRDTSGDLEE 419
           + R++LNS+      +      + + L  +   +   +V LRC +E  +L+     ++E+
Sbjct: 279 ELREMLNSRRAQELALLQSRQQHELELLREQHAREKEEVVLRCGQEAAELKEKLQSEMEK 338

Query: 420 DEQSADSDYEEHDEERQTVHTNLR 491
           + Q   +  E+ + E+     NLR
Sbjct: 339 NAQIVKTLKEDWESEKDLCLENLR 362

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>HSP3_MOUSE (Q62100) Sperm protamine P3|
          Length = 102

 Score = 28.9 bits (63), Expect = 8.1
 Identities = 12/57 (21%), Positives = 27/57 (47%)
 Frame = +3

Query: 300 HNNNRVNLPEDPALQHSLQVALRCKEEHDLRRDTSGDLEEDEQSADSDYEEHDEERQ 470
           H     N   +   + S++  + C  + +    + G+ EE+++  + + EE +EE Q
Sbjct: 12  HEQPAQNTGHNRGHESSMKKLVACVSQDNFSLSSEGEEEEEDEEEEEEEEEEEEEEQ 68


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 66,271,277
Number of Sequences: 219361
Number of extensions: 1228156
Number of successful extensions: 6365
Number of sequences better than 10.0: 56
Number of HSP's better than 10.0 without gapping: 4864
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5823
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3581144924
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result