ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags19a24
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC120533.4| Oryza sativa (japonica cultivar-group) chromosome... 321 1e-84
2dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 321 1e-84
3dbj|AK101154.1| Oryza sativa (japonica cultivar-group) cDNA clon... 321 1e-84
4gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 321 1e-84
5dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 248 1e-62
6dbj|AK103122.1| Oryza sativa (japonica cultivar-group) cDNA clon... 248 1e-62
7gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 248 1e-62
8emb|AL713936.4|CNS07YPH Oryza sativa chromosome 12, . BAC OJ1057... 248 1e-62
9gb|BT018913.1| Zea mays clone EL01T0403G05.d mRNA sequence 56 1e-04
10ref|NM_183759.1| Oryza sativa (japonica cultivar-group), predic... 50 0.007
11tpg|BK000941.1| TPA: TPA_inf: Oryza sativa transposon Rim2-M333,... 50 0.007
12dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 50 0.007
13dbj|AP003414.3| Oryza sativa (japonica cultivar-group) genomic D... 50 0.007
14dbj|AP003921.3| Oryza sativa (japonica cultivar-group) genomic D... 50 0.007
15dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.11
16dbj|AP004877.3| Oryza sativa (japonica cultivar-group) genomic D... 46 0.11
17dbj|AK065397.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.11
18gb|AC007619.23| Homo sapiens 12 BAC RP11-253I19 (Roswell Park Ca... 44 0.44
19ref|XM_508398.1| PREDICTED: Pan troglodytes Rho GTPase activatin... 42 1.7
20ref|NM_004308.2| Homo sapiens Rho GTPase activating protein 1 (A... 42 1.7
21gb|DQ205408.1| Astragalus membranaceus var. mongholicus isoflavo... 42 1.7
22ref|NM_145990.2| Mus musculus CDK5 regulatory subunit associated... 42 1.7
23emb|CR450766.5| Zebrafish DNA sequence from clone DKEY-192C10 in... 42 1.7
24emb|AL023876.2|HS111F4 Human DNA sequence from clone RP6-111F4 o... 42 1.7
25emb|CR857648.1| Pongo pygmaeus mRNA; cDNA DKFZp469E2128 (from cl... 42 1.7
26gb|BT008055.1| Synthetic construct Homo sapiens Rho GTPase activ... 42 1.7
27gb|AC115088.6| Homo sapiens chromosome 11, clone RP11-792G9, com... 42 1.7
28dbj|AK013550.1| Mus musculus adult male hippocampus cDNA, RIKEN ... 42 1.7
29gb|AC108171.3| Homo sapiens chromosome X clone RP11-468J11, RP11... 42 1.7
30gb|AF274857.3| Homo sapiens chromosome X clone CTD-2011N23 map q... 42 1.7
31ref|XM_575844.1| PREDICTED: Rattus norvegicus CDK5 activator-bin... 42 1.7
32gb|BC079888.1| Mus musculus CDK5 regulatory subunit associated p... 42 1.7
33gb|AY891644.1| Synthetic construct Homo sapiens clone FLH025823.... 42 1.7
34gb|AY891643.1| Synthetic construct Homo sapiens clone FLH025822.... 42 1.7
35dbj|AK129411.1| Mus musculus mRNA for mKIAA1633 protein 42 1.7
36gb|BC018118.1| Homo sapiens Rho GTPase activating protein 1, mRN... 42 1.7
37gb|U62794.1|HSU62794 Human CDC42 GAP-related protein mRNA, parti... 42 1.7
38emb|AL626768.21| Mouse DNA sequence from clone RP23-347B4 on chr... 42 1.7
39emb|Z23024.1|HSRHOGAPX H.sapiens rhoGAP protein 42 1.7
40emb|AL845502.5| Mouse DNA sequence from clone RP23-395A21 on chr... 42 1.7
41gb|U02570.1|HSU02570 Human CDC42 GTPase-activating protein mRNA,... 42 1.7
42ref|NM_111839.2| Arabidopsis thaliana transcription factor AT3G1... 40 6.8
43gb|AC113593.14| Mus musculus chromosome 15, clone RP23-363I24, c... 40 6.8
44gb|AC130529.2| Mus musculus BAC clone RP23-124O11 from chromosom... 40 6.8
45gb|AY233858.1| Pygathrix roxellana 12S ribosomal RNA gene, parti... 40 6.8
46gb|AY233857.1| Pygathrix roxellana 12S ribosomal RNA gene, parti... 40 6.8
47gb|AY233856.1| Pygathrix roxellana 12S ribosomal RNA gene, parti... 40 6.8
48gb|AY232665.1| Pygathrix brelichi 12S ribosomal RNA gene, partia... 40 6.8
49gb|AC140206.2| Mus musculus BAC clone RP24-446O8 from chromosome... 40 6.8
50emb|X63786.1|TTSNRU23 T.thermophila genes for snRNA U2-3, snRNA ... 40 6.8
51gb|AC010927.5|ATAC010927 Arabidopsis thaliana chromosome III BAC... 40 6.8
52gb|AC122026.3| Mus musculus BAC clone RP24-390D21 from chromosom... 40 6.8
53emb|CR847808.6| Zebrafish DNA sequence from clone CH211-151I8 in... 40 6.8
54emb|AL139158.11| Human DNA sequence from clone RP5-884C9 on chro... 40 6.8
55emb|AL121776.19|HSJ1050K3 Human DNA sequence from clone RP5-1050... 40 6.8
56emb|AL109825.23|HSJ148H17 Human DNA sequence from clone RP1-148H... 40 6.8
57gb|AY091028.1| Arabidopsis thaliana unknown protein (At3g10040) ... 40 6.8
58gb|AC104325.28| Mus musculus strain C57BL/6J clone rp23-204m3 ma... 40 6.8
59emb|AL591065.17| Mouse DNA sequence from clone RP23-199H17 on ch... 40 6.8
60gb|AC155270.3| Mus musculus BAC clone RP23-195H19 from chromosom... 40 6.8
61emb|CR388361.6| Zebrafish DNA sequence from clone DKEY-87J1 in l... 40 6.8
62gb|AC080129.26| Homo sapiens 3 BAC RP11-135A1 (Roswell Park Canc... 40 6.8
63gb|AC100735.15| Mus musculus chromosome 7, clone RP24-331F7, com... 40 6.8
64gb|AY863425.1| Trachypithecus obscurus mitochondrion, complete g... 40 6.8
65emb|BX321898.29| Zebrafish DNA sequence from clone DKEYP-34C12 i... 40 6.8
66dbj|AP002456.3| Homo sapiens genomic DNA, chromosome 11q clone:R... 40 6.8
67dbj|AP001929.5| Homo sapiens genomic DNA, chromosome 11 clone:RP... 40 6.8
68gb|AC158383.3| Mus musculus BAC clone RP23-135O16 from chromosom... 40 6.8
69emb|BX000494.2|CNS08CDK Oryza sativa chromosome 12, . BAC OSJNBa... 40 6.8
70emb|AL732321.18| Mouse DNA sequence from clone RP23-167N17 on ch... 40 6.8 
>gb|AC120533.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0081F16 map E50055S, complete sequence
          Length = 148220

 Score =  321 bits (162), Expect = 1e-84
 Identities = 384/457 (84%), Gaps = 6/457 (1%)
 Strand = Plus / Plus

                                                                         
Query: 31    tgcagaagaagggtaaatggaaagcaatatcaaaggtcatgggcgaaagaggctgcagtg 90
             |||| |||||||| |||||||||||||||||||||||||||||||| ||||| |||  ||
Sbjct: 79475 tgcaaaagaagggaaaatggaaagcaatatcaaaggtcatgggcgagagaggttgccatg 79534

                                                                         
Query: 91    tgtcaccacaacagtgcgaggataagttcaatgacctcaacaagagatataaaaggctta 150
             |||| ||||| ||||| |||||||||||||||||||| || |||||||| ||||| || |
Sbjct: 79535 tgtcgccacagcagtgtgaggataagttcaatgaccttaataagagatacaaaagactaa 79594

                                                                         
Query: 151   cagatatccttggtcgtggcactgcttgctgtgttgtggaaaatccancacttcttgata 210
             |||||||||||||  | || ||||||||   ||||||||| ||||   ||||||||||| 
Sbjct: 79595 cagatatccttggaaggggtactgcttgtaatgttgtggagaatcactcacttcttgatc 79654

                                                                         
Query: 211   gcatgcataatctttctgataagatgaaagaagatgcaaggaagatattgaactctaagc 270
              |||| |||   ||||||| ||||||||||| ||||||||||||||| ||||||| || |
Sbjct: 79655 acatggata---tttctgagaagatgaaagaggatgcaaggaagatactgaactccaaac 79711

                                                                         
Query: 271   acttattctatgagcagatgtgttcctatcataacaacaaccgtgtgaatttacctgaag 330
             |||| ||||||||  ||||||||||||| ||||| || |||||| | | | | |||||||
Sbjct: 79712 acttgttctatgaagagatgtgttcctaccataataataaccgtataagtctgcctgaag 79771

                                                                         
Query: 331   atcccgcacttcagcactcactacaggttgctcttagatgtaaagaggagcatgatctga 390
             |||||||||||||||| ||||||||| ||||||||||||||||||||||  ||||| | |
Sbjct: 79772 atcccgcacttcagcagtcactacagcttgctcttagatgtaaagaggataatgatttca 79831

                                                                         
Query: 391   ggagggatacaagtggagatcttga---agaggatgagcagagtgcagattctgattacg 447
              |||| || |||||||||||  |||   ||| ||||| ||||||| |||||| ||||| |
Sbjct: 79832 tgaggcatgcaagtggagatgctgaactagatgatgatcagagtgaagattcagattatg 79891

                                                  
Query: 448   aggagcatgatgaagagcgtcaaacagttcataccaa 484
             ||||| |||| ||||| | || | ||||| |||||||
Sbjct: 79892 aggagaatgaggaagaacatcgagcagttgataccaa 79928
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score =  321 bits (162), Expect = 1e-84
 Identities = 384/457 (84%), Gaps = 6/457 (1%)
 Strand = Plus / Plus

                                                                           
Query: 31      tgcagaagaagggtaaatggaaagcaatatcaaaggtcatgggcgaaagaggctgcagtg 90
               |||| |||||||| |||||||||||||||||||||||||||||||| ||||| |||  ||
Sbjct: 3074105 tgcaaaagaagggaaaatggaaagcaatatcaaaggtcatgggcgagagaggttgccatg 3074164

                                                                           
Query: 91      tgtcaccacaacagtgcgaggataagttcaatgacctcaacaagagatataaaaggctta 150
               |||| ||||| ||||| |||||||||||||||||||| || |||||||| ||||| || |
Sbjct: 3074165 tgtcgccacagcagtgtgaggataagttcaatgaccttaataagagatacaaaagactaa 3074224

                                                                           
Query: 151     cagatatccttggtcgtggcactgcttgctgtgttgtggaaaatccancacttcttgata 210
               |||||||||||||  | || ||||||||   ||||||||| ||||   ||||||||||| 
Sbjct: 3074225 cagatatccttggaaggggtactgcttgtaatgttgtggagaatcactcacttcttgatc 3074284

                                                                           
Query: 211     gcatgcataatctttctgataagatgaaagaagatgcaaggaagatattgaactctaagc 270
                |||| |||   ||||||| ||||||||||| ||||||||||||||| ||||||| || |
Sbjct: 3074285 acatggata---tttctgagaagatgaaagaggatgcaaggaagatactgaactccaaac 3074341

                                                                           
Query: 271     acttattctatgagcagatgtgttcctatcataacaacaaccgtgtgaatttacctgaag 330
               |||| ||||||||  ||||||||||||| ||||| || |||||| | | | | |||||||
Sbjct: 3074342 acttgttctatgaagagatgtgttcctaccataataataaccgtataagtctgcctgaag 3074401

                                                                           
Query: 331     atcccgcacttcagcactcactacaggttgctcttagatgtaaagaggagcatgatctga 390
               |||||||||||||||| ||||||||| ||||||||||||||||||||||  ||||| | |
Sbjct: 3074402 atcccgcacttcagcagtcactacagcttgctcttagatgtaaagaggataatgatttca 3074461

                                                                           
Query: 391     ggagggatacaagtggagatcttga---agaggatgagcagagtgcagattctgattacg 447
                |||| || |||||||||||  |||   ||| ||||| ||||||| |||||| ||||| |
Sbjct: 3074462 tgaggcatgcaagtggagatgctgaactagatgatgatcagagtgaagattcagattatg 3074521

                                                    
Query: 448     aggagcatgatgaagagcgtcaaacagttcataccaa 484
               ||||| |||| ||||| | || | ||||| |||||||
Sbjct: 3074522 aggagaatgaggaagaacatcgagcagttgataccaa 3074558
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>dbj|AK101154.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033027D16, full
            insert sequence
          Length = 2583

 Score =  321 bits (162), Expect = 1e-84
 Identities = 384/457 (84%), Gaps = 6/457 (1%)
 Strand = Plus / Plus

                                                                        
Query: 31   tgcagaagaagggtaaatggaaagcaatatcaaaggtcatgggcgaaagaggctgcagtg 90
            |||| |||||||| |||||||||||||||||||||||||||||||| ||||| |||  ||
Sbjct: 1404 tgcaaaagaagggaaaatggaaagcaatatcaaaggtcatgggcgagagaggttgccatg 1463

                                                                        
Query: 91   tgtcaccacaacagtgcgaggataagttcaatgacctcaacaagagatataaaaggctta 150
            |||| ||||| ||||| |||||||||||||||||||| || |||||||| ||||| || |
Sbjct: 1464 tgtcgccacagcagtgtgaggataagttcaatgaccttaataagagatacaaaagactaa 1523

                                                                        
Query: 151  cagatatccttggtcgtggcactgcttgctgtgttgtggaaaatccancacttcttgata 210
            |||||||||||||  | || ||||||||   ||||||||| ||||   ||||||||||| 
Sbjct: 1524 cagatatccttggaaggggtactgcttgtaatgttgtggagaatcactcacttcttgatc 1583

                                                                        
Query: 211  gcatgcataatctttctgataagatgaaagaagatgcaaggaagatattgaactctaagc 270
             |||| |||   ||||||| ||||||||||| ||||||||||||||| ||||||| || |
Sbjct: 1584 acatggata---tttctgagaagatgaaagaggatgcaaggaagatactgaactccaaac 1640

                                                                        
Query: 271  acttattctatgagcagatgtgttcctatcataacaacaaccgtgtgaatttacctgaag 330
            |||| ||||||||  ||||||||||||| ||||| || |||||| | | | | |||||||
Sbjct: 1641 acttgttctatgaagagatgtgttcctaccataataataaccgtataagtctgcctgaag 1700

                                                                        
Query: 331  atcccgcacttcagcactcactacaggttgctcttagatgtaaagaggagcatgatctga 390
            |||||||||||||||| ||||||||| ||||||||||||||||||||||  ||||| | |
Sbjct: 1701 atcccgcacttcagcagtcactacagcttgctcttagatgtaaagaggataatgatttca 1760

                                                                        
Query: 391  ggagggatacaagtggagatcttga---agaggatgagcagagtgcagattctgattacg 447
             |||| || |||||||||||  |||   ||| ||||| ||||||| |||||| ||||| |
Sbjct: 1761 tgaggcatgcaagtggagatgctgaactagatgatgatcagagtgaagattcagattatg 1820

                                                 
Query: 448  aggagcatgatgaagagcgtcaaacagttcataccaa 484
            ||||| |||| ||||| | || | ||||| |||||||
Sbjct: 1821 aggagaatgaggaagaacatcgagcagttgataccaa 1857
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score =  321 bits (162), Expect = 1e-84
 Identities = 384/457 (84%), Gaps = 6/457 (1%)
 Strand = Plus / Plus

                                                                           
Query: 31      tgcagaagaagggtaaatggaaagcaatatcaaaggtcatgggcgaaagaggctgcagtg 90
               |||| |||||||| |||||||||||||||||||||||||||||||| ||||| |||  ||
Sbjct: 3083136 tgcaaaagaagggaaaatggaaagcaatatcaaaggtcatgggcgagagaggttgccatg 3083195

                                                                           
Query: 91      tgtcaccacaacagtgcgaggataagttcaatgacctcaacaagagatataaaaggctta 150
               |||| ||||| ||||| |||||||||||||||||||| || |||||||| ||||| || |
Sbjct: 3083196 tgtcgccacagcagtgtgaggataagttcaatgaccttaataagagatacaaaagactaa 3083255

                                                                           
Query: 151     cagatatccttggtcgtggcactgcttgctgtgttgtggaaaatccancacttcttgata 210
               |||||||||||||  | || ||||||||   ||||||||| ||||   ||||||||||| 
Sbjct: 3083256 cagatatccttggaaggggtactgcttgtaatgttgtggagaatcactcacttcttgatc 3083315

                                                                           
Query: 211     gcatgcataatctttctgataagatgaaagaagatgcaaggaagatattgaactctaagc 270
                |||| |||   ||||||| ||||||||||| ||||||||||||||| ||||||| || |
Sbjct: 3083316 acatggata---tttctgagaagatgaaagaggatgcaaggaagatactgaactccaaac 3083372

                                                                           
Query: 271     acttattctatgagcagatgtgttcctatcataacaacaaccgtgtgaatttacctgaag 330
               |||| ||||||||  ||||||||||||| ||||| || |||||| | | | | |||||||
Sbjct: 3083373 acttgttctatgaagagatgtgttcctaccataataataaccgtataagtctgcctgaag 3083432

                                                                           
Query: 331     atcccgcacttcagcactcactacaggttgctcttagatgtaaagaggagcatgatctga 390
               |||||||||||||||| ||||||||| ||||||||||||||||||||||  ||||| | |
Sbjct: 3083433 atcccgcacttcagcagtcactacagcttgctcttagatgtaaagaggataatgatttca 3083492

                                                                           
Query: 391     ggagggatacaagtggagatcttga---agaggatgagcagagtgcagattctgattacg 447
                |||| || |||||||||||  |||   ||| ||||| ||||||| |||||| ||||| |
Sbjct: 3083493 tgaggcatgcaagtggagatgctgaactagatgatgatcagagtgaagattcagattatg 3083552

                                                    
Query: 448     aggagcatgatgaagagcgtcaaacagttcataccaa 484
               ||||| |||| ||||| | || | ||||| |||||||
Sbjct: 3083553 aggagaatgaggaagaacatcgagcagttgataccaa 3083589
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score =  248 bits (125), Expect = 1e-62
 Identities = 352/428 (82%)
 Strand = Plus / Minus

                                                                           
Query: 25      caatagtgcagaagaagggtaaatggaaagcaatatcaaaggtcatgggcgaaagaggct 84
               ||||| ||||||| ||||| || ||||| |||||||||||||||||||| ||  ||||||
Sbjct: 3220860 caataatgcagaaaaagggcaagtggaaggcaatatcaaaggtcatgggtgagcgaggct 3220801

                                                                           
Query: 85      gcagtgtgtcaccacaacagtgcgaggataagttcaatgacctcaacaagagatataaaa 144
               ||||||| ||||| || || || || ||||| |||||||| ||||| |||||||| ||||
Sbjct: 3220800 gcagtgtatcaccgcagcaatgtgaagataaattcaatgatctcaataagagatacaaaa 3220741

                                                                           
Query: 145     ggcttacagatatccttggtcgtggcactgcttgctgtgttgtggaaaatccancacttc 204
               | ||||||||||||||||| || || || ||||||    ||||||| ||||   | || |
Sbjct: 3220740 gacttacagatatccttggccggggtacagcttgcaagattgtggagaatcatgctctgc 3220681

                                                                           
Query: 205     ttgatagcatgcataatctttctgataagatgaaagaagatgcaaggaagatattgaact 264
               | ||| |||||  |||||| ||||| ||||||||||| ||||| ||||||||| |||  |
Sbjct: 3220680 tggattgcatgagtaatctgtctgacaagatgaaagatgatgcgaggaagatactgagtt 3220621

                                                                           
Query: 265     ctaagcacttattctatgagcagatgtgttcctatcataacaacaaccgtgtgaatttac 324
               | |||||||| ||||| ||| ||||||| ||||| ||||| ||||| || |||| ||| |
Sbjct: 3220620 caaagcacttgttctacgaggagatgtgctcctaccataataacaatcgagtgagtttgc 3220561

                                                                           
Query: 325     ctgaagatcccgcacttcagcactcactacaggttgctcttagatgtaaagaggagcatg 384
               |||||||||| || |||||||  ||||| ||| |||| |||||||||||||| |||||||
Sbjct: 3220560 ctgaagatcctgcccttcagcgttcactgcagcttgcccttagatgtaaagatgagcatg 3220501

                                                                           
Query: 385     atctgaggagggatacaagtggagatcttgaagaggatgagcagagtgcagattctgatt 444
               ||||||||||||  ||||| ||||||   || || ||||| || |||| ||| |||||||
Sbjct: 3220500 atctgaggaggggaacaagcggagatgccgatgaagatgatcaaagtgtagactctgatt 3220441

                       
Query: 445     acgaggag 452
                |||||||
Sbjct: 3220440 ccgaggag 3220433



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 372    aaagaggagcatgatctgag 391
              ||||||||||||||||||||
Sbjct: 276619 aaagaggagcatgatctgag 276600
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>dbj|AK103122.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033119K12, full
            insert sequence
          Length = 1756

 Score =  248 bits (125), Expect = 1e-62
 Identities = 352/428 (82%)
 Strand = Plus / Plus

                                                                        
Query: 25   caatagtgcagaagaagggtaaatggaaagcaatatcaaaggtcatgggcgaaagaggct 84
            ||||| ||||||| ||||| || ||||| |||||||||||||||||||| ||  ||||||
Sbjct: 638  caataatgcagaaaaagggcaagtggaaggcaatatcaaaggtcatgggtgagcgaggct 697

                                                                        
Query: 85   gcagtgtgtcaccacaacagtgcgaggataagttcaatgacctcaacaagagatataaaa 144
            ||||||| ||||| || || || || ||||| |||||||| ||||| |||||||| ||||
Sbjct: 698  gcagtgtatcaccgcagcaatgtgaagataaattcaatgatctcaataagagatacaaaa 757

                                                                        
Query: 145  ggcttacagatatccttggtcgtggcactgcttgctgtgttgtggaaaatccancacttc 204
            | ||||||||||||||||| || || || ||||||    ||||||| ||||   | || |
Sbjct: 758  gacttacagatatccttggccggggtacagcttgcaagattgtggagaatcatgctctgc 817

                                                                        
Query: 205  ttgatagcatgcataatctttctgataagatgaaagaagatgcaaggaagatattgaact 264
            | ||| |||||  |||||| ||||| ||||||||||| ||||| ||||||||| |||  |
Sbjct: 818  tggattgcatgagtaatctgtctgacaagatgaaagatgatgcgaggaagatactgagtt 877

                                                                        
Query: 265  ctaagcacttattctatgagcagatgtgttcctatcataacaacaaccgtgtgaatttac 324
            | |||||||| ||||| ||| ||||||| ||||| ||||| ||||| || |||| ||| |
Sbjct: 878  caaagcacttgttctacgaggagatgtgctcctaccataataacaatcgagtgagtttgc 937

                                                                        
Query: 325  ctgaagatcccgcacttcagcactcactacaggttgctcttagatgtaaagaggagcatg 384
            |||||||||| || |||||||  ||||| ||| |||| |||||||||||||| |||||||
Sbjct: 938  ctgaagatcctgcccttcagcgttcactgcagcttgcccttagatgtaaagatgagcatg 997

                                                                        
Query: 385  atctgaggagggatacaagtggagatcttgaagaggatgagcagagtgcagattctgatt 444
            ||||||||||||  ||||| ||||||   || || ||||| || |||| ||| |||||||
Sbjct: 998  atctgaggaggggaacaagcggagatgccgatgaagatgatcaaagtgtagactctgatt 1057

                    
Query: 445  acgaggag 452
             |||||||
Sbjct: 1058 ccgaggag 1065
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score =  248 bits (125), Expect = 1e-62
 Identities = 352/428 (82%)
 Strand = Plus / Minus

                                                                           
Query: 25      caatagtgcagaagaagggtaaatggaaagcaatatcaaaggtcatgggcgaaagaggct 84
               ||||| ||||||| ||||| || ||||| |||||||||||||||||||| ||  ||||||
Sbjct: 3220805 caataatgcagaaaaagggcaagtggaaggcaatatcaaaggtcatgggtgagcgaggct 3220746

                                                                           
Query: 85      gcagtgtgtcaccacaacagtgcgaggataagttcaatgacctcaacaagagatataaaa 144
               ||||||| ||||| || || || || ||||| |||||||| ||||| |||||||| ||||
Sbjct: 3220745 gcagtgtatcaccgcagcaatgtgaagataaattcaatgatctcaataagagatacaaaa 3220686

                                                                           
Query: 145     ggcttacagatatccttggtcgtggcactgcttgctgtgttgtggaaaatccancacttc 204
               | ||||||||||||||||| || || || ||||||    ||||||| ||||   | || |
Sbjct: 3220685 gacttacagatatccttggccggggtacagcttgcaagattgtggagaatcatgctctgc 3220626

                                                                           
Query: 205     ttgatagcatgcataatctttctgataagatgaaagaagatgcaaggaagatattgaact 264
               | ||| |||||  |||||| ||||| ||||||||||| ||||| ||||||||| |||  |
Sbjct: 3220625 tggattgcatgagtaatctgtctgacaagatgaaagatgatgcgaggaagatactgagtt 3220566

                                                                           
Query: 265     ctaagcacttattctatgagcagatgtgttcctatcataacaacaaccgtgtgaatttac 324
               | |||||||| ||||| ||| ||||||| ||||| ||||| ||||| || |||| ||| |
Sbjct: 3220565 caaagcacttgttctacgaggagatgtgctcctaccataataacaatcgagtgagtttgc 3220506

                                                                           
Query: 325     ctgaagatcccgcacttcagcactcactacaggttgctcttagatgtaaagaggagcatg 384
               |||||||||| || |||||||  ||||| ||| |||| |||||||||||||| |||||||
Sbjct: 3220505 ctgaagatcctgcccttcagcgttcactgcagcttgcccttagatgtaaagatgagcatg 3220446

                                                                           
Query: 385     atctgaggagggatacaagtggagatcttgaagaggatgagcagagtgcagattctgatt 444
               ||||||||||||  ||||| ||||||   || || ||||| || |||| ||| |||||||
Sbjct: 3220445 atctgaggaggggaacaagcggagatgccgatgaagatgatcaaagtgtagactctgatt 3220386

                       
Query: 445     acgaggag 452
                |||||||
Sbjct: 3220385 ccgaggag 3220378



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 372    aaagaggagcatgatctgag 391
              ||||||||||||||||||||
Sbjct: 276619 aaagaggagcatgatctgag 276600
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>emb|AL713936.4|CNS07YPH Oryza sativa chromosome 12, . BAC OJ1057_G11 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 109081

 Score =  248 bits (125), Expect = 1e-62
 Identities = 352/428 (82%)
 Strand = Plus / Minus

                                                                         
Query: 25    caatagtgcagaagaagggtaaatggaaagcaatatcaaaggtcatgggcgaaagaggct 84
             ||||| ||||||| ||||| || ||||| |||||||||||||||||||| ||  ||||||
Sbjct: 11246 caataatgcagaaaaagggcaagtggaaggcaatatcaaaggtcatgggtgagcgaggct 11187

                                                                         
Query: 85    gcagtgtgtcaccacaacagtgcgaggataagttcaatgacctcaacaagagatataaaa 144
             ||||||| ||||| || || || || ||||| |||||||| ||||| |||||||| ||||
Sbjct: 11186 gcagtgtatcaccgcagcaatgtgaagataaattcaatgatctcaataagagatacaaaa 11127

                                                                         
Query: 145   ggcttacagatatccttggtcgtggcactgcttgctgtgttgtggaaaatccancacttc 204
             | ||||||||||||||||| || || || ||||||    ||||||| ||||   | || |
Sbjct: 11126 gacttacagatatccttggccggggtacagcttgcaagattgtggagaatcatgctctgc 11067

                                                                         
Query: 205   ttgatagcatgcataatctttctgataagatgaaagaagatgcaaggaagatattgaact 264
             | ||| |||||  |||||| ||||| ||||||||||| ||||| ||||||||| |||  |
Sbjct: 11066 tggattgcatgagtaatctgtctgacaagatgaaagatgatgcgaggaagatactgagtt 11007

                                                                         
Query: 265   ctaagcacttattctatgagcagatgtgttcctatcataacaacaaccgtgtgaatttac 324
             | |||||||| ||||| ||| ||||||| ||||| ||||| ||||| || |||| ||| |
Sbjct: 11006 caaagcacttgttctacgaggagatgtgctcctaccataataacaatcgagtgagtttgc 10947

                                                                         
Query: 325   ctgaagatcccgcacttcagcactcactacaggttgctcttagatgtaaagaggagcatg 384
             |||||||||| || |||||||  ||||| ||| |||| |||||||||||||| |||||||
Sbjct: 10946 ctgaagatcctgcccttcagcgttcactgcagcttgcccttagatgtaaagatgagcatg 10887

                                                                         
Query: 385   atctgaggagggatacaagtggagatcttgaagaggatgagcagagtgcagattctgatt 444
             ||||||||||||  ||||| ||||||   || || ||||| || |||| ||| |||||||
Sbjct: 10886 atctgaggaggggaacaagcggagatgccgatgaagatgatcaaagtgtagactctgatt 10827

                     
Query: 445   acgaggag 452
              |||||||
Sbjct: 10826 ccgaggag 10819
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>gb|BT018913.1| Zea mays clone EL01T0403G05.d mRNA sequence
          Length = 1837

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Plus

                                                           
Query: 89  tgtgtcaccacaacagtgcgaggataagttcaatgacctcaacaagag 136
           |||||| || || ||||||||||| |||||||| ||||||||||||||
Sbjct: 849 tgtgtcgccgcagcagtgcgaggacaagttcaacgacctcaacaagag 896
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>ref|NM_183759.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1644

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                            
Query: 102 cagtgcgaggataagttcaatgacctcaacaag 134
           ||||||||||| |||||||| ||||||||||||
Sbjct: 559 cagtgcgaggacaagttcaacgacctcaacaag 591
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>tpg|BK000941.1| TPA: TPA_inf: Oryza sativa transposon Rim2-M333, complete sequence
          Length = 14620

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                              
Query: 102   cagtgcgaggataagttcaatgacctcaacaag 134
             ||||||||||| |||||||| ||||||||||||
Sbjct: 10148 cagtgcgaggacaagttcaacgacctcaacaag 10180
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                                 
Query: 102      cagtgcgaggataagttcaatgacctcaacaag 134
                ||||||||||| |||||||| ||||||||||||
Sbjct: 12075070 cagtgcgaggacaagttcaacgacctcaacaag 12075102
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>dbj|AP003414.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1153F04
          Length = 158174

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                              
Query: 102   cagtgcgaggataagttcaatgacctcaacaag 134
             ||||||||||| |||||||| ||||||||||||
Sbjct: 42010 cagtgcgaggacaagttcaacgacctcaacaag 42042
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>dbj|AP003921.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0028G04
          Length = 159761

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                               
Query: 102    cagtgcgaggataagttcaatgacctcaacaag 134
              ||||||||||| |||||||| ||||||||||||
Sbjct: 120734 cagtgcgaggacaagttcaacgacctcaacaag 120766
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                                   
Query: 102      cagtgcgaggataagttcaatgacctcaacaagag 136
                ||||||||||| |||||||| || |||||||||||
Sbjct: 20168344 cagtgcgaggacaagttcaacgatctcaacaagag 20168378
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>dbj|AP004877.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0472F10
          Length = 136076

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                                
Query: 102   cagtgcgaggataagttcaatgacctcaacaagag 136
             ||||||||||| |||||||| || |||||||||||
Sbjct: 41650 cagtgcgaggacaagttcaacgatctcaacaagag 41684
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>dbj|AK065397.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013022H04, full
           insert sequence
          Length = 1998

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 102 cagtgcgaggataagttcaatgacctcaacaagag 136
           ||||||||||| |||||||| || |||||||||||
Sbjct: 943 cagtgcgaggacaagttcaacgatctcaacaagag 977
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>gb|AC007619.23| Homo sapiens 12 BAC RP11-253I19 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 172206

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 46    aatggaaagcaatatcaaaggtcatg 71
             |||| |||||||||||||||||||||
Sbjct: 96962 aatgaaaagcaatatcaaaggtcatg 96987
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>ref|XM_508398.1| PREDICTED: Pan troglodytes Rho GTPase activating protein 1
           (LOC451156), mRNA
          Length = 1188

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 411 cttgaagaggatgagcagagt 431
           |||||||||||||||||||||
Sbjct: 393 cttgaagaggatgagcagagt 373
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>ref|NM_004308.2| Homo sapiens Rho GTPase activating protein 1 (ARHGAP1), mRNA
          Length = 3372

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 411 cttgaagaggatgagcagagt 431
           |||||||||||||||||||||
Sbjct: 594 cttgaagaggatgagcagagt 574
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>gb|DQ205408.1| Astragalus membranaceus var. mongholicus isoflavone synthase (IFS)
           mRNA, partial cds
          Length = 925

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 404 tggagatcttgaagaggatgagcagagtg 432
           |||||| |||||||||| |||||||||||
Sbjct: 551 tggagaacttgaagagggtgagcagagtg 579
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>ref|NM_145990.2| Mus musculus CDK5 regulatory subunit associated protein 2
           (Cdk5rap2), mRNA
          Length = 5603

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 235 tgaaagaagatgcaaggaaga 255
           |||||||||||||||||||||
Sbjct: 531 tgaaagaagatgcaaggaaga 551
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>emb|CR450766.5| Zebrafish DNA sequence from clone DKEY-192C10 in linkage group 8,
             complete sequence
          Length = 127307

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 85    gcagtgtgtcaccacaacagt 105
             |||||||||||||||||||||
Sbjct: 59492 gcagtgtgtcaccacaacagt 59512
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>emb|AL023876.2|HS111F4 Human DNA sequence from clone RP6-111F4 on chromosome Xq23, complete
             sequence
          Length = 94104

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 135   agatataaaaggcttacagat 155
             |||||||||||||||||||||
Sbjct: 88448 agatataaaaggcttacagat 88468
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>emb|CR857648.1| Pongo pygmaeus mRNA; cDNA DKFZp469E2128 (from clone DKFZp469E2128)
          Length = 2535

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 411 cttgaagaggatgagcagagt 431
           |||||||||||||||||||||
Sbjct: 615 cttgaagaggatgagcagagt 595
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>gb|BT008055.1| Synthetic construct Homo sapiens Rho GTPase activating protein 1
           mRNA, partial cds
          Length = 1320

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 411 cttgaagaggatgagcagagt 431
           |||||||||||||||||||||
Sbjct: 525 cttgaagaggatgagcagagt 505
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>gb|AC115088.6| Homo sapiens chromosome 11, clone RP11-792G9, complete sequence
          Length = 200274

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 411   cttgaagaggatgagcagagt 431
             |||||||||||||||||||||
Sbjct: 41826 cttgaagaggatgagcagagt 41846
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>dbj|AK013550.1| Mus musculus adult male hippocampus cDNA, RIKEN full-length
           enriched library, clone:2900018K03 product:hypothetical
           protein, full insert sequence
          Length = 968

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 235 tgaaagaagatgcaaggaaga 255
           |||||||||||||||||||||
Sbjct: 515 tgaaagaagatgcaaggaaga 535
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>gb|AC108171.3| Homo sapiens chromosome X clone RP11-468J11, RP11-473F11, CTC-775O14
             map q28, complete sequence
          Length = 185708

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 412   ttgaagaggatgagcagagtg 432
             |||||||||||||||||||||
Sbjct: 74797 ttgaagaggatgagcagagtg 74817
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>gb|AF274857.3| Homo sapiens chromosome X clone CTD-2011N23 map q28, complete sequence
          Length = 148527

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 412   ttgaagaggatgagcagagtg 432
             |||||||||||||||||||||
Sbjct: 89406 ttgaagaggatgagcagagtg 89426
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>ref|XM_575844.1| PREDICTED: Rattus norvegicus CDK5 activator-binding protein
           (Cdk5rap2), mRNA
          Length = 6756

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 235 tgaaagaagatgcaaggaaga 255
           |||||||||||||||||||||
Sbjct: 713 tgaaagaagatgcaaggaaga 733
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>gb|BC079888.1| Mus musculus CDK5 regulatory subunit associated protein 2, mRNA
           (cDNA clone IMAGE:30536198)
          Length = 5272

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 235 tgaaagaagatgcaaggaaga 255
           |||||||||||||||||||||
Sbjct: 394 tgaaagaagatgcaaggaaga 414
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>gb|AY891644.1| Synthetic construct Homo sapiens clone FLH025823.01L Rho GTPase
           activating protein 1 (ARHGAP1) mRNA, partial cds
          Length = 1320

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 411 cttgaagaggatgagcagagt 431
           |||||||||||||||||||||
Sbjct: 525 cttgaagaggatgagcagagt 505
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>gb|AY891643.1| Synthetic construct Homo sapiens clone FLH025822.01L Rho GTPase
           activating protein 1 (ARHGAP1) mRNA, partial cds
          Length = 1320

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 411 cttgaagaggatgagcagagt 431
           |||||||||||||||||||||
Sbjct: 525 cttgaagaggatgagcagagt 505
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>dbj|AK129411.1| Mus musculus mRNA for mKIAA1633 protein
          Length = 5603

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 235 tgaaagaagatgcaaggaaga 255
           |||||||||||||||||||||
Sbjct: 531 tgaaagaagatgcaaggaaga 551
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>gb|BC018118.1| Homo sapiens Rho GTPase activating protein 1, mRNA (cDNA clone
           MGC:8993 IMAGE:3896574), complete cds
          Length = 3372

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 411 cttgaagaggatgagcagagt 431
           |||||||||||||||||||||
Sbjct: 594 cttgaagaggatgagcagagt 574
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>gb|U62794.1|HSU62794 Human CDC42 GAP-related protein mRNA, partial cds
          Length = 1378

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 411 cttgaagaggatgagcagagt 431
           |||||||||||||||||||||
Sbjct: 213 cttgaagaggatgagcagagt 193
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>emb|AL626768.21| Mouse DNA sequence from clone RP23-347B4 on chromosome 4, complete
              sequence
          Length = 227165

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 241    aagatgcaaggaagatattga 261
              |||||||||||||||||||||
Sbjct: 157262 aagatgcaaggaagatattga 157242
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>emb|Z23024.1|HSRHOGAPX H.sapiens rhoGAP protein
          Length = 1430

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 411 cttgaagaggatgagcagagt 431
           |||||||||||||||||||||
Sbjct: 623 cttgaagaggatgagcagagt 603
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>emb|AL845502.5| Mouse DNA sequence from clone RP23-395A21 on chromosome 4, complete
             sequence
          Length = 163191

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 235   tgaaagaagatgcaaggaaga 255
             |||||||||||||||||||||
Sbjct: 78864 tgaaagaagatgcaaggaaga 78844
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>gb|U02570.1|HSU02570 Human CDC42 GTPase-activating protein mRNA, partial cds
          Length = 3345

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 411 cttgaagaggatgagcagagt 431
           |||||||||||||||||||||
Sbjct: 596 cttgaagaggatgagcagagt 576
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>ref|NM_111839.2| Arabidopsis thaliana transcription factor AT3G10040 mRNA, complete
           cds
          Length = 1657

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                               
Query: 89  tgtgtcaccacaacagtgcgaggataagttcaatga 124
           ||||||||||||||| || || || |||||||||||
Sbjct: 703 tgtgtcaccacaacaatgtgaagacaagttcaatga 738
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>gb|AC113593.14| Mus musculus chromosome 15, clone RP23-363I24, complete sequence
          Length = 170090

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 81    ggctgcagtgtgtcaccaca 100
             ||||||||||||||||||||
Sbjct: 64049 ggctgcagtgtgtcaccaca 64068
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>gb|AC130529.2| Mus musculus BAC clone RP23-124O11 from chromosome 16, complete sequence
          Length = 231967

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 212    catgcataatctttctgata 231
              ||||||||||||||||||||
Sbjct: 191662 catgcataatctttctgata 191681
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>gb|AY233858.1| Pygathrix roxellana 12S ribosomal RNA gene, partial sequence;
           mitochondrial gene for mitochondrial product
          Length = 387

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 124 acctcaacaagagatataaa 143
           ||||||||||||||||||||
Sbjct: 186 acctcaacaagagatataaa 205
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>gb|AY233857.1| Pygathrix roxellana 12S ribosomal RNA gene, partial sequence;
           mitochondrial gene for mitochondrial product
          Length = 387

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 124 acctcaacaagagatataaa 143
           ||||||||||||||||||||
Sbjct: 186 acctcaacaagagatataaa 205
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>gb|AY233856.1| Pygathrix roxellana 12S ribosomal RNA gene, partial sequence;
           mitochondrial gene for mitochondrial product
          Length = 387

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 124 acctcaacaagagatataaa 143
           ||||||||||||||||||||
Sbjct: 186 acctcaacaagagatataaa 205
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>gb|AY232665.1| Pygathrix brelichi 12S ribosomal RNA gene, partial sequence;
           mitochondrial gene for mitochondrial product
          Length = 387

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 124 acctcaacaagagatataaa 143
           ||||||||||||||||||||
Sbjct: 186 acctcaacaagagatataaa 205
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>gb|AC140206.2| Mus musculus BAC clone RP24-446O8 from chromosome 16, complete sequence
          Length = 195790

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 212   catgcataatctttctgata 231
             ||||||||||||||||||||
Sbjct: 12590 catgcataatctttctgata 12609
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>emb|X63786.1|TTSNRU23 T.thermophila genes for snRNA U2-3, snRNA U2-4
          Length = 1412

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 230 taagatgaaagaagatgcaa 249
           ||||||||||||||||||||
Sbjct: 90  taagatgaaagaagatgcaa 71
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>gb|AC010927.5|ATAC010927 Arabidopsis thaliana chromosome III BAC T22K18 genomic sequence,
             complete sequence
          Length = 96232

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                 
Query: 89    tgtgtcaccacaacagtgcgaggataagttcaatga 124
             ||||||||||||||| || || || |||||||||||
Sbjct: 46168 tgtgtcaccacaacaatgtgaagacaagttcaatga 46203
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>gb|AC122026.3| Mus musculus BAC clone RP24-390D21 from chromosome 1, complete sequence
          Length = 205642

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 279    tatgagcagatgtgttccta 298
              ||||||||||||||||||||
Sbjct: 132321 tatgagcagatgtgttccta 132302
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>emb|CR847808.6| Zebrafish DNA sequence from clone CH211-151I8 in linkage group 22,
              complete sequence
          Length = 147994

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 255    atattgaactctaagcactt 274
              ||||||||||||||||||||
Sbjct: 138321 atattgaactctaagcactt 138302
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>emb|AL139158.11| Human DNA sequence from clone RP5-884C9 on chromosome 1p34.1-35.3,
             complete sequence
          Length = 115614

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 276   ttctatgagcagatgtgttc 295
             ||||||||||||||||||||
Sbjct: 87115 ttctatgagcagatgtgttc 87134
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>emb|AL121776.19|HSJ1050K3 Human DNA sequence from clone RP5-1050K3 on chromosome 20 Contains part
             of the EYA2 gene for eyes absent homolog 2 (Drosophila), a
             glyceraldehyde 3-phosphate dehydrogenase (GAPDH)
             pseudogene and an RPL27A (ribosomal protein L27A)
             pseudogene, complete sequence
          Length = 143981

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 244   atgcaaggaagatattgaac 263
             ||||||||||||||||||||
Sbjct: 99682 atgcaaggaagatattgaac 99663
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>emb|AL109825.23|HSJ148H17 Human DNA sequence from clone RP1-148H17 on chromosome 20 Contains a
             novel gene, complete sequence
          Length = 83840

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 251   gaagatattgaactctaagcactt 274
             |||||||||||| |||||||||||
Sbjct: 10738 gaagatattgaagtctaagcactt 10715
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>gb|AY091028.1| Arabidopsis thaliana unknown protein (At3g10040) mRNA, complete cds
          Length = 1673

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                               
Query: 89  tgtgtcaccacaacagtgcgaggataagttcaatga 124
           ||||||||||||||| || || || |||||||||||
Sbjct: 703 tgtgtcaccacaacaatgtgaagacaagttcaatga 738
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>gb|AC104325.28| Mus musculus strain C57BL/6J clone rp23-204m3 map 15, complete sequence
          Length = 224086

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 81     ggctgcagtgtgtcaccaca 100
              ||||||||||||||||||||
Sbjct: 217415 ggctgcagtgtgtcaccaca 217434
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>emb|AL591065.17| Mouse DNA sequence from clone RP23-199H17 on chromosome 11 Contains the
              Myo18a gene for myosin XVIIIa, the Pipox gene for pipecolic
              acid oxidase, a novel gene (LOC327969), the 5' end of the
              Sez6 gene for seizure related gene 6 and two CpG islands,
              complete sequence
          Length = 220176

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 164    tcgtggcactgcttgctgtg 183
              ||||||||||||||||||||
Sbjct: 190315 tcgtggcactgcttgctgtg 190334
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>gb|AC155270.3| Mus musculus BAC clone RP23-195H19 from chromosome 12, complete
             sequence
          Length = 215502

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 406   gagatcttgaagaggatgag 425
             ||||||||||||||||||||
Sbjct: 76214 gagatcttgaagaggatgag 76195
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>emb|CR388361.6| Zebrafish DNA sequence from clone DKEY-87J1 in linkage group 22,
             complete sequence
          Length = 64922

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 255   atattgaactctaagcactt 274
             ||||||||||||||||||||
Sbjct: 14686 atattgaactctaagcactt 14667
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>gb|AC080129.26| Homo sapiens 3 BAC RP11-135A1 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 89037

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 232   agatgaaagaagatgcaaggaagatatt 259
             ||||||||||| ||||||| ||||||||
Sbjct: 61601 agatgaaagaaaatgcaagaaagatatt 61574
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>gb|AC100735.15| Mus musculus chromosome 7, clone RP24-331F7, complete sequence
          Length = 179974

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 231    aagatgaaagaagatgcaag 250
              ||||||||||||||||||||
Sbjct: 140608 aagatgaaagaagatgcaag 140627
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>gb|AY863425.1| Trachypithecus obscurus mitochondrion, complete genome
          Length = 16560

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 124 acctcaacaagagatataaa 143
           ||||||||||||||||||||
Sbjct: 695 acctcaacaagagatataaa 714
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>emb|BX321898.29| Zebrafish DNA sequence from clone DKEYP-34C12 in linkage group 22,
             complete sequence
          Length = 195042

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 255   atattgaactctaagcactt 274
             ||||||||||||||||||||
Sbjct: 59404 atattgaactctaagcactt 59423
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>dbj|AP002456.3| Homo sapiens genomic DNA, chromosome 11q clone:RP11-956A8, complete
             sequence
          Length = 114109

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 78    agaggctgcagtgtgtcacc 97
             ||||||||||||||||||||
Sbjct: 74121 agaggctgcagtgtgtcacc 74102
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>dbj|AP001929.5| Homo sapiens genomic DNA, chromosome 11 clone:RP11-640N11, complete
             sequence
          Length = 161547

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 78    agaggctgcagtgtgtcacc 97
             ||||||||||||||||||||
Sbjct: 10952 agaggctgcagtgtgtcacc 10933
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>gb|AC158383.3| Mus musculus BAC clone RP23-135O16 from chromosome 12, complete
             sequence
          Length = 196552

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 406   gagatcttgaagaggatgag 425
             ||||||||||||||||||||
Sbjct: 41000 gagatcttgaagaggatgag 41019
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>emb|BX000494.2|CNS08CDK Oryza sativa chromosome 12, . BAC OSJNBa0052H10 of library OSJNBa
            from chromosome 12 of cultivar Nipponbare of ssp.
            japonica of Oryza sativa (rice), complete sequence
          Length = 152222

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 372  aaagaggagcatgatctgag 391
            ||||||||||||||||||||
Sbjct: 9670 aaagaggagcatgatctgag 9651
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>emb|AL732321.18| Mouse DNA sequence from clone RP23-167N17 on chromosome X, complete
              sequence
          Length = 216244

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 10     gaaggaggaacattacaata 29
              ||||||||||||||||||||
Sbjct: 115974 gaaggaggaacattacaata 115955


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,600,663
Number of Sequences: 3902068
Number of extensions: 4600663
Number of successful extensions: 83637
Number of sequences better than 10.0: 70
Number of HSP's better than 10.0 without gapping: 70
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 83400
Number of HSP's gapped (non-prelim): 233
length of query: 502
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 480
effective length of database: 17,147,199,772
effective search space: 8230655890560
effective search space used: 8230655890560
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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