ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags19a21
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK103742.1| Oryza sativa (japonica cultivar-group) cDNA clon... 78 7e-12
2gb|AC123525.2| Oryza sativa (japonica cultivar-group) chromosome... 64 1e-07
3dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 64 1e-07
4gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 64 1e-07
5dbj|AK061862.1| Oryza sativa (japonica cultivar-group) cDNA clon... 58 6e-06
6gb|AY109148.1| Zea mays PCO129008 mRNA sequence 58 6e-06
7dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 56 3e-05
8gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 56 3e-05
9emb|BX000495.1|CNS08CDL Oryza sativa chromosome 12, . BAC OSJNBb... 56 3e-05
10gb|AY104784.1| Zea mays PCO129009 mRNA sequence 48 0.006
11ref|XM_367614.1| Magnaporthe grisea 70-15 chromosome III hypothe... 44 0.095
12ref|NM_000118.1| Homo sapiens endoglin (Osler-Rendu-Weber syndro... 40 1.5
13ref|XM_867764.1| PREDICTED: Bos taurus similar to Endoglin precu... 40 1.5
14ref|XM_846376.1| PREDICTED: Canis familiaris similar to Endoglin... 40 1.5
15gb|BC014271.2| Homo sapiens endoglin (Osler-Rendu-Weber syndrome... 40 1.5
16gb|BC031967.1| Homo sapiens cDNA clone IMAGE:4827521, with appar... 40 1.5
17gb|BC114687.1| Bos taurus cDNA clone MGC:137842 IMAGE:8088499, c... 40 1.5
18emb|AL162586.26| Human DNA sequence from clone RP11-228B15 on ch... 40 1.5
19emb|CR860247.1| Pongo pygmaeus mRNA; cDNA DKFZp469D0419 (from cl... 40 1.5
20gb|BT007558.1| Synthetic construct Homo sapiens endoglin (Osler-... 40 1.5
21gb|BT006872.1| Homo sapiens endoglin (Osler-Rendu-Weber syndrome... 40 1.5
22dbj|AK123738.1| Homo sapiens cDNA FLJ41744 fis, clone HSYRA20054... 40 1.5
23gb|U37439.1|HENDOGLN9 Homo sapiens endoglin (ENG) gene, exons 13... 40 1.5
24ref|NM_214031.1| Sus scrofa endoglin (ENG), mRNA 40 1.5
25gb|AY892828.1| Synthetic construct Homo sapiens clone FLH013258.... 40 1.5
26gb|AY890361.1| Synthetic construct Homo sapiens clone FLH013262.... 40 1.5
27gb|AY890360.1| Synthetic construct Homo sapiens clone FLH013261.... 40 1.5
28gb|AF406383.1| Uncultured alpha proteobacterium clone AEGEAN_246... 40 1.5
29emb|Z23142.1|SSENDOGA S.scrofa endoglin mRNA, complete CDS 40 1.5
30emb|X72012.1|HSENDOG H.sapiens end mRNA for endoglin 40 1.5
31gb|J05481.1|HUMENDO Human endoglin mRNA, 3' end 40 1.5
32gb|CP000110.1| Synechococcus sp. CC9605, complete genome 38 5.9
33gb|AC124227.21| Mus musculus chromosome 1, clone RP23-118M13, co... 38 5.9
34gb|AC113114.9| Mus musculus chromosome 17, clone RP23-338H10, co... 38 5.9
35gb|AC122310.2| Mus musculus BAC clone RP23-296E17 from 12, compl... 38 5.9
36gb|AC104796.4| Homo sapiens BAC clone RP11-318E19 from 4, comple... 38 5.9
37gb|AC105919.5| Homo sapiens BAC clone RP11-399F2 from 4, complet... 38 5.9
38dbj|AK052980.1| Mus musculus 15 days embryo head cDNA, RIKEN ful... 38 5.9
39dbj|AK223044.1| Homo sapiens mRNA for ENG protein (Endoglin) (Os... 38 5.9
40gb|AC091619.3| Papio anubis clone RP41-139B7, complete sequence 38 5.9
41dbj|BA000016.3| Clostridium perfringens str. 13 DNA, complete ge... 38 5.9
42emb|BX649229.2| Chicken DNA sequence from clone WAG-41C10, compl... 38 5.9
43gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. ... 38 5.9
44ref|NM_013589.1| Mus musculus latent transforming growth factor ... 38 5.9
45gb|AF004874.1|AF004874 Mus musculus latent TGF-beta binding prot... 38 5.9 
>dbj|AK103742.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033138L11, full
           insert sequence
          Length = 1354

 Score = 77.8 bits (39), Expect = 7e-12
 Identities = 72/83 (86%)
 Strand = Plus / Plus

                                                                       
Query: 44  ccggtgacggcgccggccttcctctgggcgcccaagaactacggactcagtcccaatgag 103
           ||||||| || ||| |||||||||||||||||||||||||||||| ||  | |  |||||
Sbjct: 166 ccggtgatggggcctgccttcctctgggcgcccaagaactacggattctcttctgatgag 225

                                  
Query: 104 gctaaagaagtagtccactatca 126
           ||||||||| ||||||| |||||
Sbjct: 226 gctaaagaaatagtccattatca 248
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>gb|AC123525.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0056E15,
              complete sequence
          Length = 147941

 Score = 63.9 bits (32), Expect = 1e-07
 Identities = 41/44 (93%)
 Strand = Plus / Plus

                                                          
Query: 44     ccggtgacggcgccggccttcctctgggcgcccaagaactacgg 87
              ||||||| || ||| |||||||||||||||||||||||||||||
Sbjct: 110527 ccggtgatggggcctgccttcctctgggcgcccaagaactacgg 110570



 Score = 40.1 bits (20), Expect = 1.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 99     atgaggctaaagaagtagtccactatca 126
              |||||||||||||| ||||||| |||||
Sbjct: 112698 atgaggctaaagaaatagtccattatca 112725
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score = 63.9 bits (32), Expect = 1e-07
 Identities = 41/44 (93%)
 Strand = Plus / Minus

                                                           
Query: 44      ccggtgacggcgccggccttcctctgggcgcccaagaactacgg 87
               ||||||| || ||| |||||||||||||||||||||||||||||
Sbjct: 1280088 ccggtgatggggcctgccttcctctgggcgcccaagaactacgg 1280045



 Score = 40.1 bits (20), Expect = 1.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 99      atgaggctaaagaagtagtccactatca 126
               |||||||||||||| ||||||| |||||
Sbjct: 1277917 atgaggctaaagaaatagtccattatca 1277890
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 63.9 bits (32), Expect = 1e-07
 Identities = 41/44 (93%)
 Strand = Plus / Minus

                                                           
Query: 44      ccggtgacggcgccggccttcctctgggcgcccaagaactacgg 87
               ||||||| || ||| |||||||||||||||||||||||||||||
Sbjct: 1277809 ccggtgatggggcctgccttcctctgggcgcccaagaactacgg 1277766



 Score = 40.1 bits (20), Expect = 1.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 99      atgaggctaaagaagtagtccactatca 126
               |||||||||||||| ||||||| |||||
Sbjct: 1275638 atgaggctaaagaaatagtccattatca 1275611
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>dbj|AK061862.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-040-G12, full
           insert sequence
          Length = 1371

 Score = 58.0 bits (29), Expect = 6e-06
 Identities = 41/45 (91%)
 Strand = Plus / Plus

                                                        
Query: 44  ccggtgacggcgccggccttcctctgggcgcccaagaactacgga 88
           ||||||| || ||| |||||||||||||||||||| |||||||||
Sbjct: 181 ccggtgatggggcctgccttcctctgggcgcccaataactacgga 225
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>gb|AY109148.1| Zea mays PCO129008 mRNA sequence
          Length = 1389

 Score = 58.0 bits (29), Expect = 6e-06
 Identities = 41/45 (91%)
 Strand = Plus / Plus

                                                        
Query: 44  ccggtgacggcgccggccttcctctgggcgcccaagaactacgga 88
           ||||| |||||||| || |||||||||||||| ||||||||||||
Sbjct: 207 ccggtcacggcgccagcgttcctctgggcgcctaagaactacgga 251
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score = 56.0 bits (28), Expect = 3e-05
 Identities = 40/44 (90%)
 Strand = Plus / Minus

                                                           
Query: 44      ccggtgacggcgccggccttcctctgggcgcccaagaactacgg 87
               ||||||| || ||| |||||||||||||||||||| ||||||||
Sbjct: 1154441 ccggtgatggggcctgccttcctctgggcgcccaataactacgg 1154398
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 56.0 bits (28), Expect = 3e-05
 Identities = 40/44 (90%)
 Strand = Plus / Minus

                                                           
Query: 44      ccggtgacggcgccggccttcctctgggcgcccaagaactacgg 87
               ||||||| || ||| |||||||||||||||||||| ||||||||
Sbjct: 1154441 ccggtgatggggcctgccttcctctgggcgcccaataactacgg 1154398
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>emb|BX000495.1|CNS08CDL Oryza sativa chromosome 12, . BAC OSJNBb0119L20 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 126974

 Score = 56.0 bits (28), Expect = 3e-05
 Identities = 40/44 (90%)
 Strand = Plus / Minus

                                                         
Query: 44    ccggtgacggcgccggccttcctctgggcgcccaagaactacgg 87
             ||||||| || ||| |||||||||||||||||||| ||||||||
Sbjct: 93424 ccggtgatggggcctgccttcctctgggcgcccaataactacgg 93381
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>gb|AY104784.1| Zea mays PCO129009 mRNA sequence
          Length = 1520

 Score = 48.1 bits (24), Expect = 0.006
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                       
Query: 50  acggcgccggccttcctctgggcgcccaagaactacggactcag 93
           |||||||| || ||||| ||||||||||| ||||||||| ||||
Sbjct: 203 acggcgccagcgttcctgtgggcgcccaaaaactacggattcag 246
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>ref|XM_367614.1| Magnaporthe grisea 70-15 chromosome III hypothetical protein
           (MG07525.4) partial mRNA
          Length = 1953

 Score = 44.1 bits (22), Expect = 0.095
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 46  ggtgacggcgccggccttcctc 67
           ||||||||||||||||||||||
Sbjct: 108 ggtgacggcgccggccttcctc 87
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>ref|NM_000118.1| Homo sapiens endoglin (Osler-Rendu-Weber syndrome 1) (ENG), mRNA
          Length = 3142

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 28   ggtggcggtggctgccccgg 47
            ||||||||||||||||||||
Sbjct: 2363 ggtggcggtggctgccccgg 2382
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>ref|XM_867764.1| PREDICTED: Bos taurus similar to Endoglin precursor (CD105 antigen)
            (LOC615844), mRNA
          Length = 2779

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 28   ggtggcggtggctgccccgg 47
            ||||||||||||||||||||
Sbjct: 2034 ggtggcggtggctgccccgg 2053
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>ref|XM_846376.1| PREDICTED: Canis familiaris similar to Endoglin precursor (CD105
            antigen) (LOC609166), mRNA
          Length = 2166

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 28   ggtggcggtggctgccccgg 47
            ||||||||||||||||||||
Sbjct: 2067 ggtggcggtggctgccccgg 2086
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>gb|BC014271.2| Homo sapiens endoglin (Osler-Rendu-Weber syndrome 1), mRNA (cDNA
            clone MGC:10516 IMAGE:3843174), complete cds
          Length = 2830

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 28   ggtggcggtggctgccccgg 47
            ||||||||||||||||||||
Sbjct: 2030 ggtggcggtggctgccccgg 2049
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>gb|BC031967.1| Homo sapiens cDNA clone IMAGE:4827521, with apparent retained intron
          Length = 1911

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 28   ggtggcggtggctgccccgg 47
            ||||||||||||||||||||
Sbjct: 1141 ggtggcggtggctgccccgg 1160
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>gb|BC114687.1| Bos taurus cDNA clone MGC:137842 IMAGE:8088499, complete cds
          Length = 2802

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 28   ggtggcggtggctgccccgg 47
            ||||||||||||||||||||
Sbjct: 2003 ggtggcggtggctgccccgg 2022
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>emb|AL162586.26| Human DNA sequence from clone RP11-228B15 on chromosome 9 Contains the
             5' end of the SH2D3C gene for SH2 domain containing 3C
             (CHAT,NSP3), the CDK9 gene for cyclin-dependent kinase 9
             (CDC2-related kinase) (TAK, C-2k, CDC2L4, PITALRE), the
             FPGS gene for folylpolyglutamate synthase
             (folylpolyglutamate synthetase), the 3' end fo the ENG
             gene for endoglin (Osler-Rendu-Weber syndrome 1)(END, ORW,
             HHT1, ORW1, CD105), a novel gene and five CpG islands,
             complete sequence
          Length = 80642

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 28    ggtggcggtggctgccccgg 47
             ||||||||||||||||||||
Sbjct: 67756 ggtggcggtggctgccccgg 67737
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>emb|CR860247.1| Pongo pygmaeus mRNA; cDNA DKFZp469D0419 (from clone DKFZp469D0419)
          Length = 3003

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 28   ggtggcggtggctgccccgg 47
            ||||||||||||||||||||
Sbjct: 2226 ggtggcggtggctgccccgg 2245
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>gb|BT007558.1| Synthetic construct Homo sapiens endoglin (Osler-Rendu-Weber syndrome
            1) mRNA, partial cds
          Length = 1977

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 28   ggtggcggtggctgccccgg 47
            ||||||||||||||||||||
Sbjct: 1878 ggtggcggtggctgccccgg 1897
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>gb|BT006872.1| Homo sapiens endoglin (Osler-Rendu-Weber syndrome 1) mRNA, complete
            cds
          Length = 1977

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 28   ggtggcggtggctgccccgg 47
            ||||||||||||||||||||
Sbjct: 1878 ggtggcggtggctgccccgg 1897
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>dbj|AK123738.1| Homo sapiens cDNA FLJ41744 fis, clone HSYRA2005496, highly  similar
            to ENDOGLIN PRECURSOR
          Length = 1872

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 28   ggtggcggtggctgccccgg 47
            ||||||||||||||||||||
Sbjct: 1112 ggtggcggtggctgccccgg 1131
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>gb|U37439.1|HENDOGLN9 Homo sapiens endoglin (ENG) gene, exons 13 and 14, and complete cds
          Length = 1249

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 28  ggtggcggtggctgccccgg 47
           ||||||||||||||||||||
Sbjct: 480 ggtggcggtggctgccccgg 499
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>ref|NM_214031.1| Sus scrofa endoglin (ENG), mRNA
          Length = 2908

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 28   ggtggcggtggctgccccgg 47
            ||||||||||||||||||||
Sbjct: 2121 ggtggcggtggctgccccgg 2140
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>gb|AY892828.1| Synthetic construct Homo sapiens clone FLH013258.01L endoglin (ENG)
            mRNA, partial cds
          Length = 1977

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 28   ggtggcggtggctgccccgg 47
            ||||||||||||||||||||
Sbjct: 1878 ggtggcggtggctgccccgg 1897
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>gb|AY890361.1| Synthetic construct Homo sapiens clone FLH013262.01X endoglin (ENG)
            mRNA, complete cds
          Length = 1977

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 28   ggtggcggtggctgccccgg 47
            ||||||||||||||||||||
Sbjct: 1878 ggtggcggtggctgccccgg 1897
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>gb|AY890360.1| Synthetic construct Homo sapiens clone FLH013261.01X endoglin (ENG)
            mRNA, complete cds
          Length = 1977

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 28   ggtggcggtggctgccccgg 47
            ||||||||||||||||||||
Sbjct: 1878 ggtggcggtggctgccccgg 1897
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>gb|AF406383.1| Uncultured alpha proteobacterium clone AEGEAN_246_27F 16S ribosomal
           RNA gene, partial sequence
          Length = 269

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 87  gactcagtcccaatgaggct 106
           ||||||||||||||||||||
Sbjct: 264 gactcagtcccaatgaggct 245
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>emb|Z23142.1|SSENDOGA S.scrofa endoglin mRNA, complete CDS
          Length = 2908

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 28   ggtggcggtggctgccccgg 47
            ||||||||||||||||||||
Sbjct: 2121 ggtggcggtggctgccccgg 2140
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>emb|X72012.1|HSENDOG H.sapiens end mRNA for endoglin
          Length = 3073

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 28   ggtggcggtggctgccccgg 47
            ||||||||||||||||||||
Sbjct: 2294 ggtggcggtggctgccccgg 2313
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>gb|J05481.1|HUMENDO Human endoglin mRNA, 3' end
          Length = 2620

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 28   ggtggcggtggctgccccgg 47
            ||||||||||||||||||||
Sbjct: 1839 ggtggcggtggctgccccgg 1858
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>gb|CP000110.1| Synechococcus sp. CC9605, complete genome
          Length = 2510659

 Score = 38.2 bits (19), Expect = 5.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 36      tggctgccccggtgacggc 54
               |||||||||||||||||||
Sbjct: 1411822 tggctgccccggtgacggc 1411840
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>gb|AC124227.21| Mus musculus chromosome 1, clone RP23-118M13, complete sequence
          Length = 220762

 Score = 38.2 bits (19), Expect = 5.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 25     tcaggtggcggtggctgcc 43
              |||||||||||||||||||
Sbjct: 140871 tcaggtggcggtggctgcc 140853
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>gb|AC113114.9| Mus musculus chromosome 17, clone RP23-338H10, complete sequence
          Length = 183828

 Score = 38.2 bits (19), Expect = 5.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 24     ctcaggtggcggtggctgc 42
              |||||||||||||||||||
Sbjct: 124013 ctcaggtggcggtggctgc 124031
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>gb|AC122310.2| Mus musculus BAC clone RP23-296E17 from 12, complete sequence
          Length = 186217

 Score = 38.2 bits (19), Expect = 5.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 26    caggtggcggtggctgccc 44
             |||||||||||||||||||
Sbjct: 72493 caggtggcggtggctgccc 72475
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>gb|AC104796.4| Homo sapiens BAC clone RP11-318E19 from 4, complete sequence
          Length = 169106

 Score = 38.2 bits (19), Expect = 5.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 98    aatgaggctaaagaagtag 116
             |||||||||||||||||||
Sbjct: 74699 aatgaggctaaagaagtag 74681
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>gb|AC105919.5| Homo sapiens BAC clone RP11-399F2 from 4, complete sequence
          Length = 137726

 Score = 38.2 bits (19), Expect = 5.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 98     aatgaggctaaagaagtag 116
              |||||||||||||||||||
Sbjct: 123712 aatgaggctaaagaagtag 123694
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>dbj|AK052980.1| Mus musculus 15 days embryo head cDNA, RIKEN full-length enriched
            library, clone:D930007I24 product:latent transforming
            growth factor beta binding protein 2, full insert
            sequence
          Length = 4019

 Score = 38.2 bits (19), Expect = 5.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 26   caggtggcggtggctgccc 44
            |||||||||||||||||||
Sbjct: 2552 caggtggcggtggctgccc 2534
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>dbj|AK223044.1| Homo sapiens mRNA for ENG protein (Endoglin) (Osler-Rendu-Weber
           syndrome 1) variant, clone: JTH14476
          Length = 1662

 Score = 38.2 bits (19), Expect = 5.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 29  gtggcggtggctgccccgg 47
           |||||||||||||||||||
Sbjct: 860 gtggcggtggctgccccgg 878
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>gb|AC091619.3| Papio anubis clone RP41-139B7, complete sequence
          Length = 181302

 Score = 38.2 bits (19), Expect = 5.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 58    ggccttcctctgggcgccc 76
             |||||||||||||||||||
Sbjct: 56626 ggccttcctctgggcgccc 56608
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>dbj|BA000016.3| Clostridium perfringens str. 13 DNA, complete genome
          Length = 3031430

 Score = 38.2 bits (19), Expect = 5.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 20     gctgctcaggtggcggtgg 38
              |||||||||||||||||||
Sbjct: 639148 gctgctcaggtggcggtgg 639166
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>emb|BX649229.2| Chicken DNA sequence from clone WAG-41C10, complete sequence
          Length = 147869

 Score = 38.2 bits (19), Expect = 5.9
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 4     ggtgatgctggtcgctgctgctc 26
             ||||||||||||| |||||||||
Sbjct: 36869 ggtgatgctggtccctgctgctc 36891
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>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 38.2 bits (19), Expect = 5.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 9       tgctggtcgctgctgctca 27
               |||||||||||||||||||
Sbjct: 1004864 tgctggtcgctgctgctca 1004882



 Score = 38.2 bits (19), Expect = 5.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 42     ccccggtgacggcgccggc 60
              |||||||||||||||||||
Sbjct: 148522 ccccggtgacggcgccggc 148504
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>ref|NM_013589.1| Mus musculus latent transforming growth factor beta binding protein 2
            (Ltbp2), mRNA
          Length = 6807

 Score = 38.2 bits (19), Expect = 5.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 26   caggtggcggtggctgccc 44
            |||||||||||||||||||
Sbjct: 2602 caggtggcggtggctgccc 2584
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>gb|AF004874.1|AF004874 Mus musculus latent TGF-beta binding protein-2 mRNA, complete cds
          Length = 6807

 Score = 38.2 bits (19), Expect = 5.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 26   caggtggcggtggctgccc 44
            |||||||||||||||||||
Sbjct: 2602 caggtggcggtggctgccc 2584


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 889,660
Number of Sequences: 3902068
Number of extensions: 889660
Number of successful extensions: 89824
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 89520
Number of HSP's gapped (non-prelim): 303
length of query: 126
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 105
effective length of database: 17,151,101,840
effective search space: 1800865693200
effective search space used: 1800865693200
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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