| Clone Name | bags19a17 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK101550.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033048O14, full insert sequence Length = 2267 Score = 440 bits (222), Expect = e-120 Identities = 330/366 (90%) Strand = Plus / Plus Query: 1 aaggacacctaccttggaagatgaaaaggcgatgccatacaagtctgagaagctacaaaa 60 ||||||||| |||||||||||||| | | | ||||| || |||| ||||||||||| Sbjct: 1515 aaggacaccgaccttggaagatgacaggattgtaccatataaacctgacaagctacaaaa 1574 Query: 61 tgactcgacagttattgacatgggccctcctgctgattgggtgaagataaatgttcggag 120 |||||| | ||| ||||| | |||||||| ||||||||||| |||||||| |||||||| Sbjct: 1575 tgactcaatggttcttgaccttggccctccagctgattgggtaaagataaacgttcggag 1634 Query: 121 aactaaagattgctatgaagtctatgcattggttcctggccttcttcgtgaagaggtaca 180 ||| ||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| Sbjct: 1635 aaccaaagattgctatgaagtctatgcattggttcctggccttctgcgtgaggaggtaca 1694 Query: 181 tgttcagtcagatcctgctggccgcttgatagttacaggagagcctgaacaactagataa 240 |||||||||||||||||||||||| ||||||||||| ||||||||||| |||||||| || Sbjct: 1695 tgttcagtcagatcctgctggccgtttgatagttactggagagcctgagcaactagacaa 1754 Query: 241 tccttggggtgttactccattcaagaaggtcattagtttgccctcccgcattgatcctca 300 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1755 tccttggggtgttactccattcaagaaggttattagtttgccctcccgcattgatcctca 1814 Query: 301 tcaaacctcagcagttgtcactctccatgggcaattatttgttcgtgcaccatttgagca 360 |||||| || |||||||||||||||||||| || ||||||| ||||||||||| ||||| Sbjct: 1815 tcaaacttcggcagttgtcactctccatggacagctatttgtccgtgcaccattcgagca 1874 Query: 361 gtcaaa 366 |||||| Sbjct: 1875 gtcaaa 1880
>dbj|AK099075.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013170P10, full insert sequence Length = 2308 Score = 440 bits (222), Expect = e-120 Identities = 330/366 (90%) Strand = Plus / Plus Query: 1 aaggacacctaccttggaagatgaaaaggcgatgccatacaagtctgagaagctacaaaa 60 ||||||||| |||||||||||||| | | | ||||| || |||| ||||||||||| Sbjct: 1458 aaggacaccgaccttggaagatgacaggattgtaccatataaacctgacaagctacaaaa 1517 Query: 61 tgactcgacagttattgacatgggccctcctgctgattgggtgaagataaatgttcggag 120 |||||| | ||| ||||| | |||||||| ||||||||||| |||||||| |||||||| Sbjct: 1518 tgactcaatggttcttgaccttggccctccagctgattgggtaaagataaacgttcggag 1577 Query: 121 aactaaagattgctatgaagtctatgcattggttcctggccttcttcgtgaagaggtaca 180 ||| ||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| Sbjct: 1578 aaccaaagattgctatgaagtctatgcattggttcctggccttctgcgtgaggaggtaca 1637 Query: 181 tgttcagtcagatcctgctggccgcttgatagttacaggagagcctgaacaactagataa 240 |||||||||||||||||||||||| ||||||||||| ||||||||||| |||||||| || Sbjct: 1638 tgttcagtcagatcctgctggccgtttgatagttactggagagcctgagcaactagacaa 1697 Query: 241 tccttggggtgttactccattcaagaaggtcattagtttgccctcccgcattgatcctca 300 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1698 tccttggggtgttactccattcaagaaggttattagtttgccctcccgcattgatcctca 1757 Query: 301 tcaaacctcagcagttgtcactctccatgggcaattatttgttcgtgcaccatttgagca 360 |||||| || |||||||||||||||||||| || ||||||| ||||||||||| ||||| Sbjct: 1758 tcaaacttcggcagttgtcactctccatggacagctatttgtccgtgcaccattcgagca 1817 Query: 361 gtcaaa 366 |||||| Sbjct: 1818 gtcaaa 1823
>dbj|AK073058.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033020C22, full insert sequence Length = 2286 Score = 440 bits (222), Expect = e-120 Identities = 330/366 (90%) Strand = Plus / Plus Query: 1 aaggacacctaccttggaagatgaaaaggcgatgccatacaagtctgagaagctacaaaa 60 ||||||||| |||||||||||||| | | | ||||| || |||| ||||||||||| Sbjct: 1474 aaggacaccgaccttggaagatgacaggattgtaccatataaacctgacaagctacaaaa 1533 Query: 61 tgactcgacagttattgacatgggccctcctgctgattgggtgaagataaatgttcggag 120 |||||| | ||| ||||| | |||||||| ||||||||||| |||||||| |||||||| Sbjct: 1534 tgactcaatggttcttgaccttggccctccagctgattgggtaaagataaacgttcggag 1593 Query: 121 aactaaagattgctatgaagtctatgcattggttcctggccttcttcgtgaagaggtaca 180 ||| ||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| Sbjct: 1594 aaccaaagattgctatgaagtctatgcattggttcctggccttctgcgtgaggaggtaca 1653 Query: 181 tgttcagtcagatcctgctggccgcttgatagttacaggagagcctgaacaactagataa 240 |||||||||||||||||||||||| ||||||||||| ||||||||||| |||||||| || Sbjct: 1654 tgttcagtcagatcctgctggccgtttgatagttactggagagcctgagcaactagacaa 1713 Query: 241 tccttggggtgttactccattcaagaaggtcattagtttgccctcccgcattgatcctca 300 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1714 tccttggggtgttactccattcaagaaggttattagtttgccctcccgcattgatcctca 1773 Query: 301 tcaaacctcagcagttgtcactctccatgggcaattatttgttcgtgcaccatttgagca 360 |||||| || |||||||||||||||||||| || ||||||| ||||||||||| ||||| Sbjct: 1774 tcaaacttcggcagttgtcactctccatggacagctatttgtccgtgcaccattcgagca 1833 Query: 361 gtcaaa 366 |||||| Sbjct: 1834 gtcaaa 1839
>dbj|AK071559.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023099P16, full insert sequence Length = 1255 Score = 440 bits (222), Expect = e-120 Identities = 330/366 (90%) Strand = Plus / Plus Query: 1 aaggacacctaccttggaagatgaaaaggcgatgccatacaagtctgagaagctacaaaa 60 ||||||||| |||||||||||||| | | | ||||| || |||| ||||||||||| Sbjct: 437 aaggacaccgaccttggaagatgacaggattgtaccatataaacctgacaagctacaaaa 496 Query: 61 tgactcgacagttattgacatgggccctcctgctgattgggtgaagataaatgttcggag 120 |||||| | ||| ||||| | |||||||| ||||||||||| |||||||| |||||||| Sbjct: 497 tgactcaatggttcttgaccttggccctccagctgattgggtaaagataaacgttcggag 556 Query: 121 aactaaagattgctatgaagtctatgcattggttcctggccttcttcgtgaagaggtaca 180 ||| ||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| Sbjct: 557 aaccaaagattgctatgaagtctatgcattggttcctggccttctgcgtgaggaggtaca 616 Query: 181 tgttcagtcagatcctgctggccgcttgatagttacaggagagcctgaacaactagataa 240 |||||||||||||||||||||||| ||||||||||| ||||||||||| |||||||| || Sbjct: 617 tgttcagtcagatcctgctggccgtttgatagttactggagagcctgagcaactagacaa 676 Query: 241 tccttggggtgttactccattcaagaaggtcattagtttgccctcccgcattgatcctca 300 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 677 tccttggggtgttactccattcaagaaggttattagtttgccctcccgcattgatcctca 736 Query: 301 tcaaacctcagcagttgtcactctccatgggcaattatttgttcgtgcaccatttgagca 360 |||||| || |||||||||||||||||||| || ||||||| ||||||||||| ||||| Sbjct: 737 tcaaacttcggcagttgtcactctccatggacagctatttgtccgtgcaccattcgagca 796 Query: 361 gtcaaa 366 |||||| Sbjct: 797 gtcaaa 802
>dbj|AK064549.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-112-B09, full insert sequence Length = 1331 Score = 440 bits (222), Expect = e-120 Identities = 330/366 (90%) Strand = Plus / Plus Query: 1 aaggacacctaccttggaagatgaaaaggcgatgccatacaagtctgagaagctacaaaa 60 ||||||||| |||||||||||||| | | | ||||| || |||| ||||||||||| Sbjct: 634 aaggacaccgaccttggaagatgacaggattgtaccatataaacctgacaagctacaaaa 693 Query: 61 tgactcgacagttattgacatgggccctcctgctgattgggtgaagataaatgttcggag 120 |||||| | ||| ||||| | |||||||| ||||||||||| |||||||| |||||||| Sbjct: 694 tgactcaatggttcttgaccttggccctccagctgattgggtaaagataaacgttcggag 753 Query: 121 aactaaagattgctatgaagtctatgcattggttcctggccttcttcgtgaagaggtaca 180 ||| ||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| Sbjct: 754 aaccaaagattgctatgaagtctatgcattggttcctggccttctgcgtgaggaggtaca 813 Query: 181 tgttcagtcagatcctgctggccgcttgatagttacaggagagcctgaacaactagataa 240 |||||||||||||||||||||||| ||||||||||| ||||||||||| |||||||| || Sbjct: 814 tgttcagtcagatcctgctggccgtttgatagttactggagagcctgagcaactagacaa 873 Query: 241 tccttggggtgttactccattcaagaaggtcattagtttgccctcccgcattgatcctca 300 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 874 tccttggggtgttactccattcaagaaggttattagtttgccctcccgcattgatcctca 933 Query: 301 tcaaacctcagcagttgtcactctccatgggcaattatttgttcgtgcaccatttgagca 360 |||||| || |||||||||||||||||||| || ||||||| ||||||||||| ||||| Sbjct: 934 tcaaacttcggcagttgtcactctccatggacagctatttgtccgtgcaccattcgagca 993 Query: 361 gtcaaa 366 |||||| Sbjct: 994 gtcaaa 999
>gb|BT016983.1| Zea mays clone EK07D2304B06.c mRNA sequence Length = 1263 Score = 363 bits (183), Expect = 4e-97 Identities = 279/311 (89%) Strand = Plus / Plus Query: 58 aaatgactcgacagttattgacatgggccctcctgctgattgggtgaagataaatgttcg 117 ||||||||||| ||||||||||||||||| ||||||||||||||||| ||||||||| | Sbjct: 495 aaatgactcgatggttattgacatgggcccccctgctgattgggtgaaaataaatgttag 554 Query: 118 gagaactaaagattgctatgaagtctatgcattggttcctggccttcttcgtgaagaggt 177 || ||||||||||||||||||||||||||| ||||||||||||||||| | |||||||| Sbjct: 555 gaaaactaaagattgctatgaagtctatgcgttggttcctggccttctgagggaagaggt 614 Query: 178 acatgttcagtcagatcctgctggccgcttgatagttacaggagagcctgaacaactaga 237 |||||||||||| || || ||||| || ||||||||||| ||||||||||| ||| | || Sbjct: 615 acatgttcagtccgacccagctggtcgtttgatagttactggagagcctgagcaattgga 674 Query: 238 taatccttggggtgttactccattcaagaaggtcattagtttgccctcccgcattgatcc 297 ||| || |||||||| ||||||||||||||||||||||||||||| ||||||||||| || Sbjct: 675 taacccatggggtgtcactccattcaagaaggtcattagtttgccttcccgcattgaccc 734 Query: 298 tcatcaaacctcagcagttgtcactctccatgggcaattatttgttcgtgcaccatttga 357 ||| |||||||| ||||||||||| ||||||||||| ||||||| |||||||||||||| Sbjct: 735 tcaccaaacctccgcagttgtcaccctccatgggcagctatttgtgcgtgcaccatttga 794 Query: 358 gcagtcaaaat 368 || ||||||| Sbjct: 795 acaatcaaaat 805
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 163 bits (82), Expect = 7e-37 Identities = 94/98 (95%) Strand = Plus / Plus Query: 174 aggtacatgttcagtcagatcctgctggccgcttgatagttacaggagagcctgaacaac 233 ||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| |||| Sbjct: 24635024 aggtacatgttcagtcagatcctgctggccgtttgatagttactggagagcctgagcaac 24635083 Query: 234 tagataatccttggggtgttactccattcaagaaggtc 271 |||| ||||||||||||||||||||||||||||||||| Sbjct: 24635084 tagacaatccttggggtgttactccattcaagaaggtc 24635121 Score = 135 bits (68), Expect = 2e-28 Identities = 92/100 (92%) Strand = Plus / Plus Query: 267 aggtcattagtttgccctcccgcattgatcctcatcaaacctcagcagttgtcactctcc 326 |||| ||||||||||||||||||||||||||||||||||| || |||||||||||||||| Sbjct: 24635205 aggttattagtttgccctcccgcattgatcctcatcaaacttcggcagttgtcactctcc 24635264 Query: 327 atgggcaattatttgttcgtgcaccatttgagcagtcaaa 366 |||| || ||||||| ||||||||||| ||||||||||| Sbjct: 24635265 atggacagctatttgtccgtgcaccattcgagcagtcaaa 24635304 Score = 91.7 bits (46), Expect = 2e-15 Identities = 52/54 (96%) Strand = Plus / Plus Query: 125 aaagattgctatgaagtctatgcattggttcctggccttcttcgtgaagaggta 178 ||||||||||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 24634670 aaagattgctatgaagtctatgcattggttcctggccttctgcgtgaggaggta 24634723 Score = 60.0 bits (30), Expect = 7e-06 Identities = 57/66 (86%) Strand = Plus / Plus Query: 58 aaatgactcgacagttattgacatgggccctcctgctgattgggtgaagataaatgttcg 117 ||||||||| | ||| ||||| | |||||||| ||||||||||| |||||||| ||||| Sbjct: 24634350 aaatgactcaatggttcttgaccttggccctccagctgattgggtaaagataaacgttcg 24634409 Query: 118 gagaac 123 |||||| Sbjct: 24634410 gagaac 24634415 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 1 aaggacacctaccttggaagatga 24 ||||||||| |||||||||||||| Sbjct: 24634067 aaggacaccgaccttggaagatga 24634090
>dbj|AP003539.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0040H10 Length = 173301 Score = 163 bits (82), Expect = 7e-37 Identities = 94/98 (95%) Strand = Plus / Plus Query: 174 aggtacatgttcagtcagatcctgctggccgcttgatagttacaggagagcctgaacaac 233 ||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| |||| Sbjct: 118217 aggtacatgttcagtcagatcctgctggccgtttgatagttactggagagcctgagcaac 118276 Query: 234 tagataatccttggggtgttactccattcaagaaggtc 271 |||| ||||||||||||||||||||||||||||||||| Sbjct: 118277 tagacaatccttggggtgttactccattcaagaaggtc 118314 Score = 135 bits (68), Expect = 2e-28 Identities = 92/100 (92%) Strand = Plus / Plus Query: 267 aggtcattagtttgccctcccgcattgatcctcatcaaacctcagcagttgtcactctcc 326 |||| ||||||||||||||||||||||||||||||||||| || |||||||||||||||| Sbjct: 118398 aggttattagtttgccctcccgcattgatcctcatcaaacttcggcagttgtcactctcc 118457 Query: 327 atgggcaattatttgttcgtgcaccatttgagcagtcaaa 366 |||| || ||||||| ||||||||||| ||||||||||| Sbjct: 118458 atggacagctatttgtccgtgcaccattcgagcagtcaaa 118497 Score = 91.7 bits (46), Expect = 2e-15 Identities = 52/54 (96%) Strand = Plus / Plus Query: 125 aaagattgctatgaagtctatgcattggttcctggccttcttcgtgaagaggta 178 ||||||||||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 117863 aaagattgctatgaagtctatgcattggttcctggccttctgcgtgaggaggta 117916 Score = 60.0 bits (30), Expect = 7e-06 Identities = 57/66 (86%) Strand = Plus / Plus Query: 58 aaatgactcgacagttattgacatgggccctcctgctgattgggtgaagataaatgttcg 117 ||||||||| | ||| ||||| | |||||||| ||||||||||| |||||||| ||||| Sbjct: 117543 aaatgactcaatggttcttgaccttggccctccagctgattgggtaaagataaacgttcg 117602 Query: 118 gagaac 123 |||||| Sbjct: 117603 gagaac 117608 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 1 aaggacacctaccttggaagatga 24 ||||||||| |||||||||||||| Sbjct: 117260 aaggacaccgaccttggaagatga 117283
>ref|XM_467454.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2072 Score = 81.8 bits (41), Expect = 2e-12 Identities = 95/113 (84%) Strand = Plus / Plus Query: 89 cctgctgattgggtgaagataaatgttcggagaactaaagattgctatgaagtctatgca 148 ||||| || ||||||||||| ||||| || ||||||||||| | ||| ||||||| Sbjct: 1298 cctgccgagtgggtgaagattaatgtacgacagactaaagattgtttcgaaatctatgct 1357 Query: 149 ttggttcctggccttcttcgtgaagaggtacatgttcagtcagatcctgctgg 201 |||||||||| ||||| || |||||||| ||||||||||||||||||||||| Sbjct: 1358 ctggttcctggacttctacgcgaagaggtgcatgttcagtcagatcctgctgg 1410 Score = 73.8 bits (37), Expect = 5e-10 Identities = 100/121 (82%) Strand = Plus / Plus Query: 236 gataatccttggggtgttactccattcaagaaggtcattagtttgccctcccgcattgat 295 |||||||||||||| | ||||||||||||||||| | | | |||| | | || ||| Sbjct: 1445 gataatccttgggggatcactccattcaagaaggtggtcaatctgccattgaggatcgat 1504 Query: 296 cctcatcaaacctcagcagttgtcactctccatgggcaattatttgttcgtgcaccattt 355 ||||||||||| || || |||||||| || ||||| ||| |||||||||||||||||||| Sbjct: 1505 cctcatcaaacatccgccgttgtcacgcttcatggccaactatttgttcgtgcaccattt 1564 Query: 356 g 356 | Sbjct: 1565 g 1565
>dbj|AK107036.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-121-B09, full insert sequence Length = 2072 Score = 81.8 bits (41), Expect = 2e-12 Identities = 95/113 (84%) Strand = Plus / Plus Query: 89 cctgctgattgggtgaagataaatgttcggagaactaaagattgctatgaagtctatgca 148 ||||| || ||||||||||| ||||| || ||||||||||| | ||| ||||||| Sbjct: 1298 cctgccgagtgggtgaagattaatgtacgacagactaaagattgtttcgaaatctatgct 1357 Query: 149 ttggttcctggccttcttcgtgaagaggtacatgttcagtcagatcctgctgg 201 |||||||||| ||||| || |||||||| ||||||||||||||||||||||| Sbjct: 1358 ctggttcctggacttctacgcgaagaggtgcatgttcagtcagatcctgctgg 1410 Score = 73.8 bits (37), Expect = 5e-10 Identities = 100/121 (82%) Strand = Plus / Plus Query: 236 gataatccttggggtgttactccattcaagaaggtcattagtttgccctcccgcattgat 295 |||||||||||||| | ||||||||||||||||| | | | |||| | | || ||| Sbjct: 1445 gataatccttgggggatcactccattcaagaaggtggtcaatctgccattgaggatcgat 1504 Query: 296 cctcatcaaacctcagcagttgtcactctccatgggcaattatttgttcgtgcaccattt 355 ||||||||||| || || |||||||| || ||||| ||| |||||||||||||||||||| Sbjct: 1505 cctcatcaaacatccgccgttgtcacgcttcatggccaactatttgttcgtgcaccattt 1564 Query: 356 g 356 | Sbjct: 1565 g 1565
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 71.9 bits (36), Expect = 2e-09 Identities = 57/64 (89%) Strand = Plus / Minus Query: 293 gatcctcatcaaacctcagcagttgtcactctccatgggcaattatttgttcgtgcacca 352 |||||||||||||| || || |||||||| || ||||| ||| ||||||||||||||||| Sbjct: 29630304 gatcctcatcaaacatccgccgttgtcacgcttcatggccaactatttgttcgtgcacca 29630245 Query: 353 tttg 356 |||| Sbjct: 29630244 tttg 29630241 Score = 48.1 bits (24), Expect = 0.027 Identities = 27/28 (96%) Strand = Plus / Minus Query: 174 aggtacatgttcagtcagatcctgctgg 201 |||| ||||||||||||||||||||||| Sbjct: 29630502 aggtgcatgttcagtcagatcctgctgg 29630475 Score = 46.1 bits (23), Expect = 0.11 Identities = 32/35 (91%) Strand = Plus / Minus Query: 236 gataatccttggggtgttactccattcaagaaggt 270 |||||||||||||| | ||||||||||||||||| Sbjct: 29630440 gataatccttgggggatcactccattcaagaaggt 29630406
>dbj|AP004165.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1479_B12 Length = 127089 Score = 71.9 bits (36), Expect = 2e-09 Identities = 57/64 (89%) Strand = Plus / Minus Query: 293 gatcctcatcaaacctcagcagttgtcactctccatgggcaattatttgttcgtgcacca 352 |||||||||||||| || || |||||||| || ||||| ||| ||||||||||||||||| Sbjct: 88025 gatcctcatcaaacatccgccgttgtcacgcttcatggccaactatttgttcgtgcacca 87966 Query: 353 tttg 356 |||| Sbjct: 87965 tttg 87962 Score = 48.1 bits (24), Expect = 0.027 Identities = 27/28 (96%) Strand = Plus / Minus Query: 174 aggtacatgttcagtcagatcctgctgg 201 |||| ||||||||||||||||||||||| Sbjct: 88223 aggtgcatgttcagtcagatcctgctgg 88196 Score = 46.1 bits (23), Expect = 0.11 Identities = 32/35 (91%) Strand = Plus / Minus Query: 236 gataatccttggggtgttactccattcaagaaggt 270 |||||||||||||| | ||||||||||||||||| Sbjct: 88161 gataatccttgggggatcactccattcaagaaggt 88127
>ref|NM_106301.3| Arabidopsis thaliana transcription factor AT1G76510 transcript variant AT1G76510.1 mRNA, complete cds Length = 1741 Score = 50.1 bits (25), Expect = 0.007 Identities = 43/49 (87%) Strand = Plus / Plus Query: 150 tggttcctggccttcttcgtgaagaggtacatgttcagtcagatcctgc 198 |||| ||||| |||||||| |||||||| | |||||||||||| ||||| Sbjct: 1320 tggtacctggacttcttcgcgaagaggtccgtgttcagtcagaccctgc 1368
>ref|NM_202427.1| Arabidopsis thaliana unknown protein AT1G76510 transcript variant AT1G76510.2 mRNA, complete cds Length = 1720 Score = 50.1 bits (25), Expect = 0.007 Identities = 43/49 (87%) Strand = Plus / Plus Query: 150 tggttcctggccttcttcgtgaagaggtacatgttcagtcagatcctgc 198 |||| ||||| |||||||| |||||||| | |||||||||||| ||||| Sbjct: 1299 tggtacctggacttcttcgcgaagaggtccgtgttcagtcagaccctgc 1347
>emb|BX814030.1|CNS0AEHL Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB52ZH10 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1387 Score = 50.1 bits (25), Expect = 0.007 Identities = 43/49 (87%) Strand = Plus / Plus Query: 150 tggttcctggccttcttcgtgaagaggtacatgttcagtcagatcctgc 198 |||| ||||| |||||||| |||||||| | |||||||||||| ||||| Sbjct: 1225 tggtacctggacttcttcgcgaagaggtccgtgttcagtcagaccctgc 1273
>emb|BX816006.1|CNS0ADDY Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH22ZD08 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1576 Score = 50.1 bits (25), Expect = 0.007 Identities = 43/49 (87%) Strand = Plus / Plus Query: 150 tggttcctggccttcttcgtgaagaggtacatgttcagtcagatcctgc 198 |||| ||||| |||||||| |||||||| | |||||||||||| ||||| Sbjct: 1206 tggtacctggacttcttcgcgaagaggtccgtgttcagtcagaccctgc 1254
>emb|BX814273.1|CNS0ADPW Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB65ZF03 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1652 Score = 50.1 bits (25), Expect = 0.007 Identities = 43/49 (87%) Strand = Plus / Plus Query: 150 tggttcctggccttcttcgtgaagaggtacatgttcagtcagatcctgc 198 |||| ||||| |||||||| |||||||| | |||||||||||| ||||| Sbjct: 1237 tggtacctggacttcttcgcgaagaggtccgtgttcagtcagaccctgc 1285
>emb|BX814039.1|CNS0ADHH Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB53ZD02 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1633 Score = 50.1 bits (25), Expect = 0.007 Identities = 43/49 (87%) Strand = Plus / Plus Query: 150 tggttcctggccttcttcgtgaagaggtacatgttcagtcagatcctgc 198 |||| ||||| |||||||| |||||||| | |||||||||||| ||||| Sbjct: 1299 tggtacctggacttcttcgcgaagaggtccgtgttcagtcagaccctgc 1347
>emb|BX817155.1|CNS0AD17 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH8ZD07 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1684 Score = 50.1 bits (25), Expect = 0.007 Identities = 43/49 (87%) Strand = Plus / Plus Query: 150 tggttcctggccttcttcgtgaagaggtacatgttcagtcagatcctgc 198 |||| ||||| |||||||| |||||||| | |||||||||||| ||||| Sbjct: 1322 tggtacctggacttcttcgcgaagaggtccgtgttcagtcagaccctgc 1370
>gb|AC008697.7| Homo sapiens chromosome 5 clone CTB-70D3, complete sequence Length = 120994 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Minus Query: 41 aagtctgagaagctacaaaatg 62 |||||||||||||||||||||| Sbjct: 120642 aagtctgagaagctacaaaatg 120621
>gb|AC008703.6| Homo sapiens chromosome 5 clone CTB-76P12, complete sequence Length = 214187 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Minus Query: 41 aagtctgagaagctacaaaatg 62 |||||||||||||||||||||| Sbjct: 35955 aagtctgagaagctacaaaatg 35934
>gb|AC134838.4| Mus musculus BAC clone RP24-350C10 from 8, complete sequence Length = 177716 Score = 44.1 bits (22), Expect = 0.43 Identities = 25/26 (96%) Strand = Plus / Minus Query: 364 aaaatcatgacactctacttgacaaa 389 |||||||||||| ||||||||||||| Sbjct: 111736 aaaatcatgacagtctacttgacaaa 111711
>emb|BX572598.1| Rhodopseudomonas palustris CGA009 complete genome; segment 6/16 Length = 346879 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 290 attgatcctcatcaaacctcagcag 314 |||||||| |||||||||||||||| Sbjct: 112182 attgatccgcatcaaacctcagcag 112206
>gb|AC016779.5| Genomic sequence for Oryza sativa clone 10N6, complete sequence Length = 140234 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 96 attgggtgaagataaatgttc 116 ||||||||||||||||||||| Sbjct: 28267 attgggtgaagataaatgttc 28287
>ref|NM_101944.2| Arabidopsis thaliana transcription factor AT1G20910 mRNA, complete cds Length = 1638 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 91 tgctgattgggtgaagataaatgt 114 |||||| ||||||||||||||||| Sbjct: 1099 tgctgactgggtgaagataaatgt 1122
>gb|BT018486.1| Zea mays clone EL01N0424E08.d mRNA sequence Length = 1830 Score = 40.1 bits (20), Expect = 6.7 Identities = 33/36 (91%), Gaps = 1/36 (2%) Strand = Plus / Plus Query: 236 gataatccttggggtgtt-actccattcaagaaggt 270 |||||||||||||| | | ||||||||||||||||| Sbjct: 1602 gataatccttggggggatcactccattcaagaaggt 1637
>gb|AC144806.10| Medicago truncatula clone mth2-34h22, complete sequence Length = 124550 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 44 tctgagaagctacaaaatga 63 |||||||||||||||||||| Sbjct: 105103 tctgagaagctacaaaatga 105084
>gb|AC140489.2| Mus musculus BAC clone RP24-144C10 from chromosome 1, complete sequence Length = 194368 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 32 atgccatacaagtctgagaa 51 |||||||||||||||||||| Sbjct: 110504 atgccatacaagtctgagaa 110485
>emb|BX813771.1|CNS0ADG4 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB39ZB10 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1545 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 91 tgctgattgggtgaagataaatgt 114 |||||| ||||||||||||||||| Sbjct: 1061 tgctgactgggtgaagataaatgt 1084
>gb|AC073050.5| Homo sapiens BAC clone RP11-70E4 from 2, complete sequence Length = 135586 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 402 atgttgccttgctggtggga 421 |||||||||||||||||||| Sbjct: 22779 atgttgccttgctggtggga 22798
>gb|AC007369.2| Arabidopsis thaliana chromosome I BAC F9H16 genomic sequence, complete sequence Length = 103192 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 91 tgctgattgggtgaagataaatgt 114 |||||| ||||||||||||||||| Sbjct: 69945 tgctgactgggtgaagataaatgt 69968 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,925,471 Number of Sequences: 3902068 Number of extensions: 3925471 Number of successful extensions: 70538 Number of sequences better than 10.0: 31 Number of HSP's better than 10.0 without gapping: 30 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 70426 Number of HSP's gapped (non-prelim): 110 length of query: 493 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 471 effective length of database: 17,147,199,772 effective search space: 8076331092612 effective search space used: 8076331092612 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)