ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags18l16 |
|---|---|
| Clone Library Name | barley_pub |
>gb|U43498.1|HVU43498 Hordeum vulgare 0-methyltransferase mRNA, partial cds Length = 983 Score = 1273 bits (642), Expect = 0.0 Identities = 663/671 (98%), Gaps = 1/671 (0%) Strand = Plus / Plus Query: 1 ggggaagaacc-gcggttgggaacactgttcgacaatgccatggctcagcactctgtgat 59 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 230 ggggaagaaccagcggttgggaacactgttcgacaatgccatggctcagcactctgtgat 289 Query: 60 cctggtcaccaagatgctcgagcgcttcaagggattcgatggtgtgcagcggcttgtgga 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 290 cctggtcaccaagatgctcgagcgcttcaagggattcgatggtgtgcagcggcttgtgga 349 Query: 120 cgtcggtggtggcaccggctccaccctagggatgatcacctctaagtacaagcacatgac 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 350 cgtcggtggtggcaccggctccaccctagggatgatcacctctaagtacaagcacatgac 409 Query: 180 cggcatcaactatgacctgcctcatgtcatcgcccaaggcctccctcttccaggagtcga 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 410 cggcatcaactatgacctgcctcatgtcatcgcccaaggcctccctcttccaggagtcga 469 Query: 240 acatgtggctggagatatgtatgagagtatacccactggagatgcggttctcttgcagtg 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 470 acatgtggctggagatatgtatgagagtatacccactggagatgcggttctcttgcagtg 529 Query: 300 gatcacgcttatgcttaacgacgacgagttcgtcaaaatactaagcaactgccacaacgc 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 530 gatcacgcttatgcttaacgacgacgagttcgtcaaaatactaagcaactgccacaacgc 589 Query: 360 tctcccaaaagacgggaaggtgatcgtcgtggatggtatcctcccggagaacccagactc 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 590 tctcccaaaagacgggaaggtgatcgtcgtggatggtatcctcccggagaacccagactc 649 Query: 420 gtctctcacagcgcgggatgcattcaccttggatatcatcatgtttgtgctcttcaaggg 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 650 gtctctcacagcgcgggatgcattcaccttggatatcatcatgtttgtgctcttcaaggg 709 Query: 480 agcaaagcagaggacggagaaggagtttgccaggctagccaaacaagctggatttaccgg 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 710 agcaaagcagaggacggagaaggagtttgccaggctagccaaacaagctggatttaccgg 769 Query: 540 tggcatcaagaaaacctacatattcttcaacttttacgctcttgagttcaccaagtagca 599 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 770 tggcatcaagaaaacctacatattcttcaacttttacgctcttgagttcaccaagtagca 829 Query: 600 tccacgtaccagagtggtatagtcccgaataggagcacttcnnnnnnngcgaataatgtc 659 ||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 830 tccacgtaccagagtggtatagtcccgaataggagcacttctttttttgcgaataatgtc 889 Query: 660 ccgaataagag 670 ||||||||||| Sbjct: 890 ccgaataagag 900
>gb|U54767.1|HVU54767 Hordeum vulgare caffeic acid O-methyltransferase (HvCOMT) gene, complete cds Length = 5238 Score = 708 bits (357), Expect = 0.0 Identities = 371/378 (98%) Strand = Plus / Plus Query: 293 tgcagtggatcacgcttatgcttaacgacgacgagttcgtcaaaatactaagcaactgcc 352 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4426 tgcagtggatcacgcttatgcttaacgacgacgagttcgtcaaaatactaagcaactgcc 4485 Query: 353 acaacgctctcccaaaagacgggaaggtgatcgtcgtggatggtatcctcccggagaacc 412 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4486 acaacgctctcccaaaagacgggaaggtgatcgtcgtggatggtatcctcccggagaacc 4545 Query: 413 cagactcgtctctcacagcgcgggatgcattcaccttggatatcatcatgtttgtgctct 472 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4546 cagactcgtctctcacagcgcgggatgcattcaccttggatatcatcatgtttgtgctct 4605 Query: 473 tcaagggagcaaagcagaggacggagaaggagtttgccaggctagccaaacaagctggat 532 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4606 tcaagggagcaaagcagaggacggagaaggagtttgccaggctagccaaacaagctggat 4665 Query: 533 ttaccggtggcatcaagaaaacctacatattcttcaacttttacgctcttgagttcacca 592 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4666 ttaccggtggcatcaagaaaacctacatattcttcaacttttacgctcttgagttcacca 4725 Query: 593 agtagcatccacgtaccagagtggtatagtcccgaataggagcacttcnnnnnnngcgaa 652 |||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 4726 agtagcatccacgtaccagagtggtatagtcccgaataggagcacttctttttttgcgaa 4785 Query: 653 taatgtcccgaataagag 670 |||||||||||||||||| Sbjct: 4786 taatgtcccgaataagag 4803 Score = 448 bits (226), Expect = e-122 Identities = 233/234 (99%), Gaps = 1/234 (0%) Strand = Plus / Plus Query: 1 ggggaagaacc-gcggttgggaacactgttcgacaatgccatggctcagcactctgtgat 59 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3417 ggggaagaaccagcggttgggaacactgttcgacaatgccatggctcagcactctgtgat 3476 Query: 60 cctggtcaccaagatgctcgagcgcttcaagggattcgatggtgtgcagcggcttgtgga 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3477 cctggtcaccaagatgctcgagcgcttcaagggattcgatggtgtgcagcggcttgtgga 3536 Query: 120 cgtcggtggtggcaccggctccaccctagggatgatcacctctaagtacaagcacatgac 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3537 cgtcggtggtggcaccggctccaccctagggatgatcacctctaagtacaagcacatgac 3596 Query: 180 cggcatcaactatgacctgcctcatgtcatcgcccaaggcctccctcttccagg 233 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3597 cggcatcaactatgacctgcctcatgtcatcgcccaaggcctccctcttccagg 3650 Score = 135 bits (68), Expect = 2e-28 Identities = 68/68 (100%) Strand = Plus / Plus Query: 230 caggagtcgaacatgtggctggagatatgtatgagagtatacccactggagatgcggttc 289 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3843 caggagtcgaacatgtggctggagatatgtatgagagtatacccactggagatgcggttc 3902 Query: 290 tcttgcag 297 |||||||| Sbjct: 3903 tcttgcag 3910
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 141 bits (71), Expect = 3e-30 Identities = 177/211 (83%), Gaps = 1/211 (0%) Strand = Plus / Plus Query: 1 ggggaagaacc-gcggttgggaacactgttcgacaatgccatggctcagcactctgtgat 59 ||||||||||| |||| |||| | ||||||||| | |||||||| ||||| || ||||| Sbjct: 5364122 ggggaagaaccagcggctgggcgcgctgttcgaccacgccatggcgcagcattcagtgat 5364181 Query: 60 cctggtcaccaagatgctcgagcgcttcaagggattcgatggtgtgcagcggcttgtgga 119 ||||||| |||||||||||| |||||| | |||||||| || || |||| ||| || || Sbjct: 5364182 tctggtcagcaagatgctcgaacgcttccaaggattcgacggcgtccagcagctcgtcga 5364241 Query: 120 cgtcggtggtggcaccggctccaccctagggatgatcacctctaagtacaagcacatgac 179 |||||||| || ||| |||||||| |||||||||||||| |||||||||||| | Sbjct: 5364242 tgtcggtgggggtgacggatccaccctggggatgatcacctcgcggtacaagcacattag 5364301 Query: 180 cggcatcaactatgacctgcctcatgtcatc 210 |||||||||||||||||||||||||||||| Sbjct: 5364302 gggcatcaactatgacctgcctcatgtcatc 5364332 Score = 97.6 bits (49), Expect = 5e-17 Identities = 130/157 (82%) Strand = Plus / Plus Query: 433 cgggatgcattcaccttggatatcatcatgtttgtgctcttcaagggagcaaagcagagg 492 |||||| |||||||| ||||||| ||||||||||| |||||||||| || ||| |||||| Sbjct: 5374568 cgggattcattcaccatggatatgatcatgtttgtcctcttcaaggtaggaaaacagagg 5374627 Query: 493 acggagaaggagtttgccaggctagccaaacaagctggatttaccggtggcatcaagaaa 552 |||||| | |||||||| | ||| ||||| ||||||| ||||||||| | | | Sbjct: 5374628 acggagcaagagtttgcaaagcttgccaaggaagctggctttaccggtacctttcggtcg 5374687 Query: 553 acctacatattcttcaacttttacgctcttgagttca 589 |||||||||||||| ||||| || ||||||||||||| Sbjct: 5374688 acctacatattcttgaacttctatgctcttgagttca 5374724 Score = 91.7 bits (46), Expect = 3e-15 Identities = 151/186 (81%) Strand = Plus / Plus Query: 25 ctgttcgacaatgccatggctcagcactctgtgatcctggtcaccaagatgctcgagcgc 84 ||||||||| | |||||||| |||||||| | ||||| || | |||||||||||| ||| Sbjct: 5171975 ctgttcgaccacgccatggcgcagcactcggcgatccgggcccgcaagatgctcgaacgc 5172034 Query: 85 ttcaagggattcgatggtgtgcagcggcttgtggacgtcggtggtggcaccggctccacc 144 ||| | || |||||||| | |||||||| || || | |||||| ||| ||| |||||| Sbjct: 5172035 ttcgaaggtttcgatggcatccagcggctcgtcgatgccggtggaggcgacggatccacc 5172094 Query: 145 ctagggatgatcacctctaagtacaagcacatgaccggcatcaactatgacctgcctcat 204 || ||||||||||||| ||| ||||| || | ||||||||||||||||||||||| Sbjct: 5172095 ctggggatgatcacctagcggtataagcatattaggggcatcaactatgacctgcctcac 5172154 Query: 205 gtcatc 210 |||||| Sbjct: 5172155 gtcatc 5172160 Score = 65.9 bits (33), Expect = 2e-07 Identities = 135/169 (79%) Strand = Plus / Plus Query: 430 gcgcgggatgcattcaccttggatatcatcatgtttgtgctcttcaagggagcaaagcag 489 |||| |||| |||||||| ||||||| ||| ||||||| |||||||||| || ||||| Sbjct: 5173247 gcgcaggattcattcaccatggatatgatcttgtttgtcctcttcaaggtagggaagcac 5173306 Query: 490 aggacggagaaggagtttgccaggctagccaaacaagctggatttaccggtggcatcaag 549 ||||| ||| | |||||||| | ||| ||||| | |||| ||||||||| | || | Sbjct: 5173307 aggacagagcaagagtttgcaaagcttgccaaggagtctggctttaccggtaccttccgg 5173366 Query: 550 aaaacctacatattcttcaacttttacgctcttgagttcaccaagtagc 598 |||||||||||||| ||||| ||||| |||||||||| ||||||| Sbjct: 5173367 tcgacctacatattcttgaacttctacgcccttgagttcaataagtagc 5173415 Score = 56.0 bits (28), Expect = 2e-04 Identities = 52/60 (86%) Strand = Plus / Plus Query: 238 gaacatgtggctggagatatgtatgagagtatacccactggagatgcggttctcttgcag 297 |||||| | ||||||||||||||||||||| | |||| ||||||||| |||| |||||| Sbjct: 5172538 gaacatatagctggagatatgtatgagagtgtgcccaatggagatgcaattcttttgcag 5172597
>emb|AL845348.4|CNS08CBA Oryza sativa chromosome 12, . BAC OSJNBb0070A23 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 105645 Score = 141 bits (71), Expect = 3e-30 Identities = 177/211 (83%), Gaps = 1/211 (0%) Strand = Plus / Plus Query: 1 ggggaagaacc-gcggttgggaacactgttcgacaatgccatggctcagcactctgtgat 59 ||||||||||| |||| |||| | ||||||||| | |||||||| ||||| || ||||| Sbjct: 36189 ggggaagaaccagcggctgggcgcgctgttcgaccacgccatggcgcagcattcagtgat 36248 Query: 60 cctggtcaccaagatgctcgagcgcttcaagggattcgatggtgtgcagcggcttgtgga 119 ||||||| |||||||||||| |||||| | |||||||| || || |||| ||| || || Sbjct: 36249 tctggtcagcaagatgctcgaacgcttccaaggattcgacggcgtccagcagctcgtcga 36308 Query: 120 cgtcggtggtggcaccggctccaccctagggatgatcacctctaagtacaagcacatgac 179 |||||||| || ||| |||||||| |||||||||||||| |||||||||||| | Sbjct: 36309 tgtcggtgggggtgacggatccaccctggggatgatcacctcgcggtacaagcacattag 36368 Query: 180 cggcatcaactatgacctgcctcatgtcatc 210 |||||||||||||||||||||||||||||| Sbjct: 36369 gggcatcaactatgacctgcctcatgtcatc 36399 Score = 97.6 bits (49), Expect = 5e-17 Identities = 130/157 (82%) Strand = Plus / Plus Query: 433 cgggatgcattcaccttggatatcatcatgtttgtgctcttcaagggagcaaagcagagg 492 |||||| |||||||| ||||||| ||||||||||| |||||||||| || ||| |||||| Sbjct: 46635 cgggattcattcaccatggatatgatcatgtttgtcctcttcaaggtaggaaaacagagg 46694 Query: 493 acggagaaggagtttgccaggctagccaaacaagctggatttaccggtggcatcaagaaa 552 |||||| | |||||||| | ||| ||||| ||||||| ||||||||| | | | Sbjct: 46695 acggagcaagagtttgcaaagcttgccaaggaagctggctttaccggtacctttcggtcg 46754 Query: 553 acctacatattcttcaacttttacgctcttgagttca 589 |||||||||||||| ||||| || ||||||||||||| Sbjct: 46755 acctacatattcttgaacttctatgctcttgagttca 46791
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 141 bits (71), Expect = 3e-30 Identities = 177/211 (83%), Gaps = 1/211 (0%) Strand = Plus / Plus Query: 1 ggggaagaacc-gcggttgggaacactgttcgacaatgccatggctcagcactctgtgat 59 ||||||||||| |||| |||| | ||||||||| | |||||||| ||||| || ||||| Sbjct: 5364111 ggggaagaaccagcggctgggcgcgctgttcgaccacgccatggcgcagcattcagtgat 5364170 Query: 60 cctggtcaccaagatgctcgagcgcttcaagggattcgatggtgtgcagcggcttgtgga 119 ||||||| |||||||||||| |||||| | |||||||| || || |||| ||| || || Sbjct: 5364171 tctggtcagcaagatgctcgaacgcttccaaggattcgacggcgtccagcagctcgtcga 5364230 Query: 120 cgtcggtggtggcaccggctccaccctagggatgatcacctctaagtacaagcacatgac 179 |||||||| || ||| |||||||| |||||||||||||| |||||||||||| | Sbjct: 5364231 tgtcggtgggggtgacggatccaccctggggatgatcacctcgcggtacaagcacattag 5364290 Query: 180 cggcatcaactatgacctgcctcatgtcatc 210 |||||||||||||||||||||||||||||| Sbjct: 5364291 gggcatcaactatgacctgcctcatgtcatc 5364321 Score = 97.6 bits (49), Expect = 5e-17 Identities = 130/157 (82%) Strand = Plus / Plus Query: 433 cgggatgcattcaccttggatatcatcatgtttgtgctcttcaagggagcaaagcagagg 492 |||||| |||||||| ||||||| ||||||||||| |||||||||| || ||| |||||| Sbjct: 5374557 cgggattcattcaccatggatatgatcatgtttgtcctcttcaaggtaggaaaacagagg 5374616 Query: 493 acggagaaggagtttgccaggctagccaaacaagctggatttaccggtggcatcaagaaa 552 |||||| | |||||||| | ||| ||||| ||||||| ||||||||| | | | Sbjct: 5374617 acggagcaagagtttgcaaagcttgccaaggaagctggctttaccggtacctttcggtcg 5374676 Query: 553 acctacatattcttcaacttttacgctcttgagttca 589 |||||||||||||| ||||| || ||||||||||||| Sbjct: 5374677 acctacatattcttgaacttctatgctcttgagttca 5374713 Score = 91.7 bits (46), Expect = 3e-15 Identities = 151/186 (81%) Strand = Plus / Plus Query: 25 ctgttcgacaatgccatggctcagcactctgtgatcctggtcaccaagatgctcgagcgc 84 ||||||||| | |||||||| |||||||| | ||||| || | |||||||||||| ||| Sbjct: 5171957 ctgttcgaccacgccatggcgcagcactcggcgatccgggcccgcaagatgctcgaacgc 5172016 Query: 85 ttcaagggattcgatggtgtgcagcggcttgtggacgtcggtggtggcaccggctccacc 144 ||| | || |||||||| | |||||||| || || | |||||| ||| ||| |||||| Sbjct: 5172017 ttcgaaggtttcgatggcatccagcggctcgtcgatgccggtggaggcgacggatccacc 5172076 Query: 145 ctagggatgatcacctctaagtacaagcacatgaccggcatcaactatgacctgcctcat 204 || ||||||||||||| ||| ||||| || | ||||||||||||||||||||||| Sbjct: 5172077 ctggggatgatcacctagcggtataagcatattaggggcatcaactatgacctgcctcac 5172136 Query: 205 gtcatc 210 |||||| Sbjct: 5172137 gtcatc 5172142 Score = 65.9 bits (33), Expect = 2e-07 Identities = 135/169 (79%) Strand = Plus / Plus Query: 430 gcgcgggatgcattcaccttggatatcatcatgtttgtgctcttcaagggagcaaagcag 489 |||| |||| |||||||| ||||||| ||| ||||||| |||||||||| || ||||| Sbjct: 5173229 gcgcaggattcattcaccatggatatgatcttgtttgtcctcttcaaggtagggaagcac 5173288 Query: 490 aggacggagaaggagtttgccaggctagccaaacaagctggatttaccggtggcatcaag 549 ||||| ||| | |||||||| | ||| ||||| | |||| ||||||||| | || | Sbjct: 5173289 aggacagagcaagagtttgcaaagcttgccaaggagtctggctttaccggtaccttccgg 5173348 Query: 550 aaaacctacatattcttcaacttttacgctcttgagttcaccaagtagc 598 |||||||||||||| ||||| ||||| |||||||||| ||||||| Sbjct: 5173349 tcgacctacatattcttgaacttctacgcccttgagttcaataagtagc 5173397 Score = 56.0 bits (28), Expect = 2e-04 Identities = 52/60 (86%) Strand = Plus / Plus Query: 238 gaacatgtggctggagatatgtatgagagtatacccactggagatgcggttctcttgcag 297 |||||| | ||||||||||||||||||||| | |||| ||||||||| |||| |||||| Sbjct: 5172520 gaacatatagctggagatatgtatgagagtgtgcccaatggagatgcaattcttttgcag 5172579
>emb|BX664711.2|CNS09SC1 Oryza sativa chromosome 12, . BAC B1001E08 of chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 141841 Score = 141 bits (71), Expect = 3e-30 Identities = 177/211 (83%), Gaps = 1/211 (0%) Strand = Plus / Minus Query: 1 ggggaagaacc-gcggttgggaacactgttcgacaatgccatggctcagcactctgtgat 59 ||||||||||| |||| |||| | ||||||||| | |||||||| ||||| || ||||| Sbjct: 101686 ggggaagaaccagcggctgggcgcgctgttcgaccacgccatggcgcagcattcagtgat 101627 Query: 60 cctggtcaccaagatgctcgagcgcttcaagggattcgatggtgtgcagcggcttgtgga 119 ||||||| |||||||||||| |||||| | |||||||| || || |||| ||| || || Sbjct: 101626 tctggtcagcaagatgctcgaacgcttccaaggattcgacggcgtccagcagctcgtcga 101567 Query: 120 cgtcggtggtggcaccggctccaccctagggatgatcacctctaagtacaagcacatgac 179 |||||||| || ||| |||||||| |||||||||||||| |||||||||||| | Sbjct: 101566 tgtcggtgggggtgacggatccaccctggggatgatcacctcgcggtacaagcacattag 101507 Query: 180 cggcatcaactatgacctgcctcatgtcatc 210 |||||||||||||||||||||||||||||| Sbjct: 101506 gggcatcaactatgacctgcctcatgtcatc 101476 Score = 97.6 bits (49), Expect = 5e-17 Identities = 130/157 (82%) Strand = Plus / Minus Query: 433 cgggatgcattcaccttggatatcatcatgtttgtgctcttcaagggagcaaagcagagg 492 |||||| |||||||| ||||||| ||||||||||| |||||||||| || ||| |||||| Sbjct: 91240 cgggattcattcaccatggatatgatcatgtttgtcctcttcaaggtaggaaaacagagg 91181 Query: 493 acggagaaggagtttgccaggctagccaaacaagctggatttaccggtggcatcaagaaa 552 |||||| | |||||||| | ||| ||||| ||||||| ||||||||| | | | Sbjct: 91180 acggagcaagagtttgcaaagcttgccaaggaagctggctttaccggtacctttcggtcg 91121 Query: 553 acctacatattcttcaacttttacgctcttgagttca 589 |||||||||||||| ||||| || ||||||||||||| Sbjct: 91120 acctacatattcttgaacttctatgctcttgagttca 91084
>emb|AL713947.3|CNS07YPQ Oryza sativa chromosome 12, . BAC OJ1003_A04 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 124959 Score = 91.7 bits (46), Expect = 3e-15 Identities = 151/186 (81%) Strand = Plus / Minus Query: 25 ctgttcgacaatgccatggctcagcactctgtgatcctggtcaccaagatgctcgagcgc 84 ||||||||| | |||||||| |||||||| | ||||| || | |||||||||||| ||| Sbjct: 91624 ctgttcgaccacgccatggcgcagcactcggcgatccgggcccgcaagatgctcgaacgc 91565 Query: 85 ttcaagggattcgatggtgtgcagcggcttgtggacgtcggtggtggcaccggctccacc 144 ||| | || |||||||| | |||||||| || || | |||||| ||| ||| |||||| Sbjct: 91564 ttcgaaggtttcgatggcatccagcggctcgtcgatgccggtggaggcgacggatccacc 91505 Query: 145 ctagggatgatcacctctaagtacaagcacatgaccggcatcaactatgacctgcctcat 204 || ||||||||||||| ||| ||||| || | ||||||||||||||||||||||| Sbjct: 91504 ctggggatgatcacctagcggtataagcatattaggggcatcaactatgacctgcctcac 91445 Query: 205 gtcatc 210 |||||| Sbjct: 91444 gtcatc 91439 Score = 65.9 bits (33), Expect = 2e-07 Identities = 135/169 (79%) Strand = Plus / Minus Query: 430 gcgcgggatgcattcaccttggatatcatcatgtttgtgctcttcaagggagcaaagcag 489 |||| |||| |||||||| ||||||| ||| ||||||| |||||||||| || ||||| Sbjct: 90352 gcgcaggattcattcaccatggatatgatcttgtttgtcctcttcaaggtagggaagcac 90293 Query: 490 aggacggagaaggagtttgccaggctagccaaacaagctggatttaccggtggcatcaag 549 ||||| ||| | |||||||| | ||| ||||| | |||| ||||||||| | || | Sbjct: 90292 aggacagagcaagagtttgcaaagcttgccaaggagtctggctttaccggtaccttccgg 90233 Query: 550 aaaacctacatattcttcaacttttacgctcttgagttcaccaagtagc 598 |||||||||||||| ||||| ||||| |||||||||| ||||||| Sbjct: 90232 tcgacctacatattcttgaacttctacgcccttgagttcaataagtagc 90184 Score = 56.0 bits (28), Expect = 2e-04 Identities = 52/60 (86%) Strand = Plus / Minus Query: 238 gaacatgtggctggagatatgtatgagagtatacccactggagatgcggttctcttgcag 297 |||||| | ||||||||||||||||||||| | |||| ||||||||| |||| |||||| Sbjct: 91061 gaacatatagctggagatatgtatgagagtgtgcccaatggagatgcaattcttttgcag 91002
>ref|XM_470970.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1065 Score = 75.8 bits (38), Expect = 2e-10 Identities = 118/142 (83%), Gaps = 2/142 (1%) Strand = Plus / Plus Query: 69 caagatgctcgagcgcttcaagggattcgatggtgtgcagcg-gcttgtggacgtcggtg 127 |||| |||||||||| ||| |||| ||||| || || ||||| ||| || |||||||| | Sbjct: 537 caagctgctcgagcgattccaggggttcgacggcgt-cagcgtgctcgtcgacgtcggcg 595 Query: 128 gtggcaccggctccaccctagggatgatcacctctaagtacaagcacatgaccggcatca 187 | ||||||||| ||||||| | ||||||||| || | ||||||| |||| |||||| | | Sbjct: 596 ggggcaccggcgccaccctggagatgatcacttcgaggtacaagaacatcaccggcgtta 655 Query: 188 actatgacctgcctcatgtcat 209 ||| ||||||||||||||||| Sbjct: 656 acttcgacctgcctcatgtcat 677
>emb|AL662935.3|OSJN00146 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0094O15, complete sequence Length = 144778 Score = 75.8 bits (38), Expect = 2e-10 Identities = 118/142 (83%), Gaps = 2/142 (1%) Strand = Plus / Plus Query: 69 caagatgctcgagcgcttcaagggattcgatggtgtgcagcg-gcttgtggacgtcggtg 127 |||| |||||||||| ||| |||| ||||| || || ||||| ||| || |||||||| | Sbjct: 103466 caagctgctcgagcgattccaggggttcgacggcgt-cagcgtgctcgtcgacgtcggcg 103524 Query: 128 gtggcaccggctccaccctagggatgatcacctctaagtacaagcacatgaccggcatca 187 | ||||||||| ||||||| | ||||||||| || | ||||||| |||| |||||| | | Sbjct: 103525 ggggcaccggcgccaccctggagatgatcacttcgaggtacaagaacatcaccggcgtta 103584 Query: 188 actatgacctgcctcatgtcat 209 ||| ||||||||||||||||| Sbjct: 103585 acttcgacctgcctcatgtcat 103606
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 75.8 bits (38), Expect = 2e-10 Identities = 118/142 (83%), Gaps = 2/142 (1%) Strand = Plus / Plus Query: 69 caagatgctcgagcgcttcaagggattcgatggtgtgcagcg-gcttgtggacgtcggtg 127 |||| |||||||||| ||| |||| ||||| || || ||||| ||| || |||||||| | Sbjct: 307646 caagctgctcgagcgattccaggggttcgacggcgt-cagcgtgctcgtcgacgtcggcg 307704 Query: 128 gtggcaccggctccaccctagggatgatcacctctaagtacaagcacatgaccggcatca 187 | ||||||||| ||||||| | ||||||||| || | ||||||| |||| |||||| | | Sbjct: 307705 ggggcaccggcgccaccctggagatgatcacttcgaggtacaagaacatcaccggcgtta 307764 Query: 188 actatgacctgcctcatgtcat 209 ||| ||||||||||||||||| Sbjct: 307765 acttcgacctgcctcatgtcat 307786 Score = 58.0 bits (29), Expect = 4e-05 Identities = 77/93 (82%) Strand = Plus / Plus Query: 118 gacgtcggtggtggcaccggctccaccctagggatgatcacctctaagtacaagcacatg 177 |||||||| || ||||||||| ||||||| | |||||||||||| ||||||||| || Sbjct: 5127492 gacgtcggcgggggcaccggcgccaccctggagatgatcacctcccggtacaagcatatc 5127551 Query: 178 accggcatcaactatgacctgcctcatgtcatc 210 |||||| | |||| ||||| || ||||||||| Sbjct: 5127552 accggcgttaacttcgacctaccccatgtcatc 5127584
>dbj|AK069960.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023037K22, full insert sequence Length = 1233 Score = 69.9 bits (35), Expect = 1e-08 Identities = 115/139 (82%), Gaps = 2/139 (1%) Strand = Plus / Plus Query: 69 caagatgctcgagcgcttcaagggattcgatggtgtgcagcg-gcttgtggacgtcggtg 127 |||| |||||||||| ||| |||| ||||| || || ||||| ||| || |||||||| | Sbjct: 547 caagctgctcgagcgattccaggggttcgacggcgt-cagcgtgctcgtcgacgtcggcg 605 Query: 128 gtggcaccggctccaccctagggatgatcacctctaagtacaagcacatgaccggcatca 187 | ||||||||| ||||||| | ||||||||| || | ||||||| |||| |||||| | | Sbjct: 606 ggggcaccggcgccaccctggagatgatcacttcgaggtacaagaacatcaccggcgtta 665 Query: 188 actatgacctgcctcatgt 206 ||| |||||||||||||| Sbjct: 666 acttcgacctgcctcatgt 684
>ref|XM_474640.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1137 Score = 58.0 bits (29), Expect = 4e-05 Identities = 77/93 (82%) Strand = Plus / Plus Query: 118 gacgtcggtggtggcaccggctccaccctagggatgatcacctctaagtacaagcacatg 177 |||||||| || ||||||||| ||||||| | |||||||||||| ||||||||| || Sbjct: 655 gacgtcggcgggggcaccggcgccaccctggagatgatcacctcccggtacaagcatatc 714 Query: 178 accggcatcaactatgacctgcctcatgtcatc 210 |||||| | |||| ||||| || ||||||||| Sbjct: 715 accggcgttaacttcgacctaccccatgtcatc 747
>emb|AL731589.3|OSJN00239 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0039G19, complete sequence Length = 144144 Score = 58.0 bits (29), Expect = 4e-05 Identities = 77/93 (82%) Strand = Plus / Plus Query: 118 gacgtcggtggtggcaccggctccaccctagggatgatcacctctaagtacaagcacatg 177 |||||||| || ||||||||| ||||||| | |||||||||||| ||||||||| || Sbjct: 103765 gacgtcggcgggggcaccggcgccaccctggagatgatcacctcccggtacaagcatatc 103824 Query: 178 accggcatcaactatgacctgcctcatgtcatc 210 |||||| | |||| ||||| || ||||||||| Sbjct: 103825 accggcgttaacttcgacctaccccatgtcatc 103857
>dbj|AK098998.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013104D16, full insert sequence Length = 1308 Score = 58.0 bits (29), Expect = 4e-05 Identities = 77/93 (82%) Strand = Plus / Plus Query: 118 gacgtcggtggtggcaccggctccaccctagggatgatcacctctaagtacaagcacatg 177 |||||||| || ||||||||| ||||||| | |||||||||||| ||||||||| || Sbjct: 681 gacgtcggcgggggcaccggcgccaccctggagatgatcacctcccggtacaagcatatc 740 Query: 178 accggcatcaactatgacctgcctcatgtcatc 210 |||||| | |||| ||||| || ||||||||| Sbjct: 741 accggcgttaacttcgacctaccccatgtcatc 773
>dbj|AK072016.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013102F20, full insert sequence Length = 1365 Score = 58.0 bits (29), Expect = 4e-05 Identities = 77/93 (82%) Strand = Plus / Plus Query: 118 gacgtcggtggtggcaccggctccaccctagggatgatcacctctaagtacaagcacatg 177 |||||||| || ||||||||| ||||||| | |||||||||||| ||||||||| || Sbjct: 668 gacgtcggcgggggcaccggcgccaccctggagatgatcacctcccggtacaagcatatc 727 Query: 178 accggcatcaactatgacctgcctcatgtcatc 210 |||||| | |||| ||||| || ||||||||| Sbjct: 728 accggcgttaacttcgacctaccccatgtcatc 760
>gb|U63634.1|MCU63634 Mesembryanthemum crystallinum inositol methyltransferase (Imt1) gene, complete cds Length = 3929 Score = 50.1 bits (25), Expect = 0.010 Identities = 28/29 (96%) Strand = Plus / Plus Query: 181 ggcatcaactatgacctgcctcatgtcat 209 ||||||||||||||| ||||||||||||| Sbjct: 2780 ggcatcaactatgacttgcctcatgtcat 2808
>gb|M87340.1|CIPIMT1A Mesembryanthemum crystallinum methyl transferase (Imt1) mRNA, complete cds Length = 1494 Score = 50.1 bits (25), Expect = 0.010 Identities = 28/29 (96%) Strand = Plus / Plus Query: 181 ggcatcaactatgacctgcctcatgtcat 209 ||||||||||||||| ||||||||||||| Sbjct: 728 ggcatcaactatgacttgcctcatgtcat 756
>gb|AF067968.1|AF067968 Mesembryanthemum crystallinum caffeic acid 3-O-methyltransferase mRNA, partial cds Length = 1205 Score = 46.1 bits (23), Expect = 0.15 Identities = 29/31 (93%) Strand = Plus / Plus Query: 181 ggcatcaactatgacctgcctcatgtcatcg 211 |||||||||| ||| |||||||||||||||| Sbjct: 636 ggcatcaactttgatctgcctcatgtcatcg 666
>emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid complete sequence Length = 2094509 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Plus Query: 100 ggtgtgcagcggcttgtggacg 121 |||||||||||||||||||||| Sbjct: 1987779 ggtgtgcagcggcttgtggacg 1987800
>gb|AC165365.3| Mus musculus BAC clone RP23-28N13 from chromosome 6, complete sequence Length = 238262 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 239 aacatgtggctggagatatgtatga 263 |||||||||||||| |||||||||| Sbjct: 237784 aacatgtggctggatatatgtatga 237760
>gb|AY041136.1| Metopus palaeformis clone 4 alpha-tubulin gene, partial cds Length = 1095 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 120 cgtcggtggtggcaccggctc 140 ||||||||||||||||||||| Sbjct: 306 cgtcggtggtggcaccggctc 326
>gb|AY041135.1| Metopus palaeformis clone 3 alpha-tubulin gene, partial cds Length = 1095 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 120 cgtcggtggtggcaccggctc 140 ||||||||||||||||||||| Sbjct: 306 cgtcggtggtggcaccggctc 326
>gb|AY041134.1| Metopus palaeformis clone 2 alpha-tubulin gene, partial cds Length = 1094 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 120 cgtcggtggtggcaccggctc 140 ||||||||||||||||||||| Sbjct: 306 cgtcggtggtggcaccggctc 326
>gb|AY041133.1| Metopus palaeformis clone 1 alpha-tubulin gene, partial cds Length = 1082 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 120 cgtcggtggtggcaccggctc 140 ||||||||||||||||||||| Sbjct: 293 cgtcggtggtggcaccggctc 313
>dbj|AK134874.1| Mus musculus adult male olfactory brain cDNA, RIKEN full-length enriched library, clone:6430501C11 product:unclassifiable, full insert sequence Length = 1789 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 239 aacatgtggctggagatatgtatga 263 |||||||||||||| |||||||||| Sbjct: 1048 aacatgtggctggatatatgtatga 1024
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 112 cttgtggacgtcggtggtggc 132 ||||||||||||||||||||| Sbjct: 4165837 cttgtggacgtcggtggtggc 4165857
>gb|AC169981.3| Mus musculus BAC clone RP24-346E16 from chromosome 6, complete sequence Length = 150872 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 239 aacatgtggctggagatatgtatga 263 |||||||||||||| |||||||||| Sbjct: 45975 aacatgtggctggatatatgtatga 45951
>gb|AE017126.1| Prochlorococcus marinus subsp. marinus str. CCMP1375 complete genome Length = 1751080 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 547 aagaaaacctacatattcttcaact 571 |||||||||||||| |||||||||| Sbjct: 313449 aagaaaacctacattttcttcaact 313473
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 73 atgctcgagcgcttcaaggg 92 |||||||||||||||||||| Sbjct: 406734 atgctcgagcgcttcaaggg 406715
>gb|AC150386.2| Branchiostoma floridae clone CH302-103G16, complete sequence Length = 195926 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 122 tcggtggtggcaccggctcc 141 |||||||||||||||||||| Sbjct: 156233 tcggtggtggcaccggctcc 156214
>ref|XM_960728.1| Neurospora crassa OR74A hypothetical protein (NCU00681.1) partial mRNA Length = 3549 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 213 ccaaggcctccctcttccag 232 |||||||||||||||||||| Sbjct: 92 ccaaggcctccctcttccag 111
>ref|XM_954671.1| Neurospora crassa OR74A hypothetical protein (NCU02338.1) partial mRNA Length = 843 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 207 catcgcccaaggcctccctc 226 |||||||||||||||||||| Sbjct: 246 catcgcccaaggcctccctc 265
>ref|XM_324860.1| Neurospora crassa OR74A hypothetical protein (NCU00681.1) partial mRNA Length = 3549 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 213 ccaaggcctccctcttccag 232 |||||||||||||||||||| Sbjct: 92 ccaaggcctccctcttccag 111
>ref|XM_331113.1| Neurospora crassa OR74A hypothetical protein (NCU02338.1) partial mRNA Length = 843 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 207 catcgcccaaggcctccctc 226 |||||||||||||||||||| Sbjct: 246 catcgcccaaggcctccctc 265
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 73 atgctcgagcgcttcaaggg 92 |||||||||||||||||||| Sbjct: 3254218 atgctcgagcgcttcaaggg 3254199
>gb|AC093477.6| Mus musculus chromosome 1, clone RP23-58B6, complete sequence Length = 225321 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 457 atcatgtttgtgctcttcaa 476 |||||||||||||||||||| Sbjct: 180672 atcatgtttgtgctcttcaa 180691
>emb|Z67990.1|CEF02D10 Caenorhabditis elegans Cosmid F02D10, complete sequence Length = 25359 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 311 tgcttaacgacgacgagttc 330 |||||||||||||||||||| Sbjct: 23418 tgcttaacgacgacgagttc 23437
>emb|BX572095.1| Prochlorococcus marinus MIT9313 complete genome; segment 1/7 Length = 349391 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 492 gacggagaaggagtttgcca 511 |||||||||||||||||||| Sbjct: 340372 gacggagaaggagtttgcca 340353
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 73 atgctcgagcgcttcaaggg 92 |||||||||||||||||||| Sbjct: 2984090 atgctcgagcgcttcaaggg 2984071
>gb|AC123904.5| Homo sapiens 12 BAC RP11-361A23 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 125400 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 446 ccttggatatcatcatgttt 465 |||||||||||||||||||| Sbjct: 120624 ccttggatatcatcatgttt 120643
>gb|AC125482.9| Medicago truncatula clone mth2-15h11, complete sequence Length = 129658 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 448 ttggatatcatcatgtttgt 467 |||||||||||||||||||| Sbjct: 111978 ttggatatcatcatgtttgt 111959
>dbj|AB057033.1| Helicobacter pylori cagA gene for cytotoxin associated protein CagA, partial cds, 3' region, strain:JapanK101 Length = 734 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 350 gccacaacgctctcccaaaa 369 |||||||||||||||||||| Sbjct: 118 gccacaacgctctcccaaaa 137
>dbj|AB057031.1| Helicobacter pylori cagA gene for cytotoxin associated protein CagA, partial cds, 3' region, strain:JapanK89 Length = 734 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 350 gccacaacgctctcccaaaa 369 |||||||||||||||||||| Sbjct: 118 gccacaacgctctcccaaaa 137
>dbj|AB057016.1| Helicobacter pylori cagA gene for cytotoxin associated protein CagA, partial cds, 3' region, strain:JapanK41 Length = 728 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 350 gccacaacgctctcccaaaa 369 |||||||||||||||||||| Sbjct: 118 gccacaacgctctcccaaaa 137
>dbj|AB057015.1| Helicobacter pylori cagA gene for cytotoxin associated protein CagA, partial cds, 3' region, strain:JapanK35 Length = 734 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 350 gccacaacgctctcccaaaa 369 |||||||||||||||||||| Sbjct: 118 gccacaacgctctcccaaaa 137
>gb|AF269342.1|AF269342 Staphylococcus epidermidis strain SR1 clone step.1002d03 genomic sequence Length = 3734 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 555 ctacatattcttcaactttt 574 |||||||||||||||||||| Sbjct: 158 ctacatattcttcaactttt 177
>gb|AF269321.1|AF269321 Staphylococcus epidermidis strain SR1 clone step.1002a08 genomic sequence Length = 3383 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 555 ctacatattcttcaactttt 574 |||||||||||||||||||| Sbjct: 2257 ctacatattcttcaactttt 2238
>gb|AE006470.1| Chlorobium tepidum TLS, complete genome Length = 2154946 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 81 gcgcttcaagggattcgatg 100 |||||||||||||||||||| Sbjct: 833378 gcgcttcaagggattcgatg 833397
>dbj|AB183825.1| Iris hollandica IhCOMT mRNA for Caffeic acid O-methyltransferase, complete cds Length = 1303 Score = 40.1 bits (20), Expect = 9.2 Identities = 32/36 (88%) Strand = Plus / Plus Query: 249 tggagatatgtatgagagtatacccactggagatgc 284 ||||||||||| ||||||| | |||| ||||||||| Sbjct: 753 tggagatatgtttgagagtgttcccagtggagatgc 788
>gb|AF270232.1|AF270232 Staphylococcus epidermidis strain SR1 clone step.1055e11 genomic sequence Length = 2995 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 555 ctacatattcttcaactttt 574 |||||||||||||||||||| Sbjct: 1530 ctacatattcttcaactttt 1549
>gb|AC067918.1|AC067918 Neurospora crassa chromosome 7, clone G23-F12, complete sequence Length = 42412 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 207 catcgcccaaggcctccctc 226 |||||||||||||||||||| Sbjct: 5763 catcgcccaaggcctccctc 5744
>emb|BX908788.1| Neurospora crassa DNA linkage group VII BAC clone B23N11 Length = 46353 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 207 catcgcccaaggcctccctc 226 |||||||||||||||||||| Sbjct: 39967 catcgcccaaggcctccctc 39948
>gb|CP000029.1| Staphylococcus epidermidis RP62A, complete genome Length = 2616530 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 555 ctacatattcttcaactttt 574 |||||||||||||||||||| Sbjct: 226689 ctacatattcttcaactttt 226670
>emb|BX470164.10| Zebrafish DNA sequence from clone DKEY-24L11 in linkage group 18, complete sequence Length = 248419 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 519 caaacaagctggatttaccg 538 |||||||||||||||||||| Sbjct: 147491 caaacaagctggatttaccg 147510
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 73 atgctcgagcgcttcaaggg 92 |||||||||||||||||||| Sbjct: 1888832 atgctcgagcgcttcaaggg 1888851
>gb|AC002352.1|AC002352 Homo sapiens 12q24 PAC P256D10 complete sequence Length = 162405 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 500 aggagtttgccaggctagcc 519 |||||||||||||||||||| Sbjct: 87811 aggagtttgccaggctagcc 87830
>gb|AE015929.1| Staphylococcus epidermidis ATCC 12228, complete genome Length = 2499279 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 555 ctacatattcttcaactttt 574 |||||||||||||||||||| Sbjct: 342024 ctacatattcttcaactttt 342005
>dbj|AP005671.2| Homo sapiens genomic DNA, chromosome 18 clone:CTD-3096M3, complete sequence Length = 86000 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 461 tgtttgtgctcttcaaggga 480 |||||||||||||||||||| Sbjct: 62538 tgtttgtgctcttcaaggga 62557
>gb|AC131584.7| Mus musculus chromosome 1, clone RP23-215C21, complete sequence Length = 197346 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 457 atcatgtttgtgctcttcaa 476 |||||||||||||||||||| Sbjct: 79882 atcatgtttgtgctcttcaa 79901
>emb|CR385047.19| Zebrafish DNA sequence from clone DKEY-221N16 in linkage group 18, complete sequence Length = 193827 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 519 caaacaagctggatttaccg 538 |||||||||||||||||||| Sbjct: 173225 caaacaagctggatttaccg 173244 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,317,485 Number of Sequences: 3902068 Number of extensions: 4317485 Number of successful extensions: 77080 Number of sequences better than 10.0: 60 Number of HSP's better than 10.0 without gapping: 61 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 76713 Number of HSP's gapped (non-prelim): 365 length of query: 670 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 647 effective length of database: 17,143,297,704 effective search space: 11091713614488 effective search space used: 11091713614488 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
