ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags18l12 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_465344.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2082 Score = 658 bits (332), Expect = 0.0 Identities = 539/608 (88%) Strand = Plus / Plus Query: 51 cccaagactgatattgagcagagcgtcatcgtgtcagactatgcgcagatggaccgcatc 110 |||||||| || || |||||||| |||||||| ||||| || ||||||||||| |||||| Sbjct: 841 cccaagacagacatcgagcagagtgtcatcgtatcagattacgcgcagatggatcgcatc 900 Query: 111 ctccgcgaggagcgcaattacatcctagggatggttaagaagatcaaggcgtctggatgc 170 ||||| ||||||||||||||||| || |||||||| |||||||||||||| ||||||||| Sbjct: 901 ctccgtgaggagcgcaattacattcttgggatggtgaagaagatcaaggcttctggatgc 960 Query: 171 aacgtcctcctcatccagaagagcatcttgcgtgatgcggtgactgagttgtcgctgcat 230 || || || ||||| ||||| ||||||||||||||||| || ||||| ||||| || ||| Sbjct: 961 aatgttctgctcattcagaaaagcatcttgcgtgatgcagttactgatttgtcacttcat 1020 Query: 231 tatctcgcaaaggctaagattctggtggtcaaggatgtggagagggacgagattgagttc 290 ||||| |||||||||||||| ||||| || ||||||||||||||||| |||||||||||| Sbjct: 1021 tatcttgcaaaggctaagatcctggttgtgaaggatgtggagagggatgagattgagttc 1080 Query: 291 atcaccaagactctcaactgcctgccaattgccaacattgagcatttccgtgaggataaa 350 ||||||||||| || ||||||||||||||||| ||||| || |||||||||||||| || Sbjct: 1081 atcaccaagaccctgaactgcctgccaattgctaacatcgaacatttccgtgaggacaag 1140 Query: 351 cttgggtatgctgatgttgtcgaggaagtgtctgccggagatggcaagattgtcaagatc 410 ||||| ||||| ||| |||| |||||||| |||| || || ||||||||||||||||| Sbjct: 1141 cttggttatgcagatcttgttgaggaagtttctgttggggagagcaagattgtcaagatc 1200 Query: 411 actggcatcagggacatggggaggactgcaactgtgcttgtccgtgggtccaaccagttg 470 | ||||| | ||| ||||| ||||| || |||||||||||||| |||||||||||||| Sbjct: 1201 atgggcattaaggatatgggaaggacagctactgtgcttgtccgggggtccaaccagtta 1260 Query: 471 gttattgatgaagctgaccgcagtctccatgatgccctttgtgtcatcaggtgcttggtg 530 || |||||||||||||| |||||||| ||||||||||||||||||||||||||||||||| Sbjct: 1261 gtaattgatgaagctgagcgcagtcttcatgatgccctttgtgtcatcaggtgcttggtg 1320 Query: 531 aacaagaggtttctaattgctggtggcggtgctcctgaaatagaaatgtcaatgcaactg 590 |||||||||||| | ||||||||||| ||||| || |||||||| ||||||||||| || Sbjct: 1321 aacaagaggtttttgattgctggtggtggtgcaccagaaatagagatgtcaatgcagctt 1380 Query: 591 gctgcttggtcaaaggagctccatgggatggagagttactgcatcaaggagtttgctgat 650 ||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 1381 gctgcttgggcaaaggagctccaagggatggagagttactgcatcaaggagtttgctgag 1440 Query: 651 gcacttga 658 |||||||| Sbjct: 1441 gcacttga 1448
>dbj|AK067672.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013119K24, full insert sequence Length = 2081 Score = 658 bits (332), Expect = 0.0 Identities = 539/608 (88%) Strand = Plus / Plus Query: 51 cccaagactgatattgagcagagcgtcatcgtgtcagactatgcgcagatggaccgcatc 110 |||||||| || || |||||||| |||||||| ||||| || ||||||||||| |||||| Sbjct: 840 cccaagacagacatcgagcagagtgtcatcgtatcagattacgcgcagatggatcgcatc 899 Query: 111 ctccgcgaggagcgcaattacatcctagggatggttaagaagatcaaggcgtctggatgc 170 ||||| ||||||||||||||||| || |||||||| |||||||||||||| ||||||||| Sbjct: 900 ctccgtgaggagcgcaattacattcttgggatggtgaagaagatcaaggcttctggatgc 959 Query: 171 aacgtcctcctcatccagaagagcatcttgcgtgatgcggtgactgagttgtcgctgcat 230 || || || ||||| ||||| ||||||||||||||||| || ||||| ||||| || ||| Sbjct: 960 aatgttctgctcattcagaaaagcatcttgcgtgatgcagttactgatttgtcacttcat 1019 Query: 231 tatctcgcaaaggctaagattctggtggtcaaggatgtggagagggacgagattgagttc 290 ||||| |||||||||||||| ||||| || ||||||||||||||||| |||||||||||| Sbjct: 1020 tatcttgcaaaggctaagatcctggttgtgaaggatgtggagagggatgagattgagttc 1079 Query: 291 atcaccaagactctcaactgcctgccaattgccaacattgagcatttccgtgaggataaa 350 ||||||||||| || ||||||||||||||||| ||||| || |||||||||||||| || Sbjct: 1080 atcaccaagaccctgaactgcctgccaattgctaacatcgaacatttccgtgaggacaag 1139 Query: 351 cttgggtatgctgatgttgtcgaggaagtgtctgccggagatggcaagattgtcaagatc 410 ||||| ||||| ||| |||| |||||||| |||| || || ||||||||||||||||| Sbjct: 1140 cttggttatgcagatcttgttgaggaagtttctgttggggagagcaagattgtcaagatc 1199 Query: 411 actggcatcagggacatggggaggactgcaactgtgcttgtccgtgggtccaaccagttg 470 | ||||| | ||| ||||| ||||| || |||||||||||||| |||||||||||||| Sbjct: 1200 atgggcattaaggatatgggaaggacagctactgtgcttgtccgggggtccaaccagtta 1259 Query: 471 gttattgatgaagctgaccgcagtctccatgatgccctttgtgtcatcaggtgcttggtg 530 || |||||||||||||| |||||||| ||||||||||||||||||||||||||||||||| Sbjct: 1260 gtaattgatgaagctgagcgcagtcttcatgatgccctttgtgtcatcaggtgcttggtg 1319 Query: 531 aacaagaggtttctaattgctggtggcggtgctcctgaaatagaaatgtcaatgcaactg 590 |||||||||||| | ||||||||||| ||||| || |||||||| ||||||||||| || Sbjct: 1320 aacaagaggtttttgattgctggtggtggtgcaccagaaatagagatgtcaatgcagctt 1379 Query: 591 gctgcttggtcaaaggagctccatgggatggagagttactgcatcaaggagtttgctgat 650 ||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 1380 gctgcttgggcaaaggagctccaagggatggagagttactgcatcaaggagtttgctgag 1439 Query: 651 gcacttga 658 |||||||| Sbjct: 1440 gcacttga 1447
>gb|BT018933.1| Zea mays clone Contig68.F mRNA sequence Length = 1331 Score = 593 bits (299), Expect = e-166 Identities = 555/639 (86%), Gaps = 1/639 (0%) Strand = Plus / Plus Query: 21 atcgctgtcatccagtttcagatctcgccgcccaagactgatattgagcagagcgtcatc 80 ||||||||||| ||||| || ||||| || ||||||||||| ||||||||||| ||||| Sbjct: 295 atcgctgtcatacagttccaaatctcaccacccaagactgacattgagcagagtgtcatt 354 Query: 81 gtgtcagactatgcgcagatggaccgcatcctccgcgaggagcgcaattacatcctaggg 140 || || ||||| || ||||||||||||||||| || |||||||||||||| ||||| ||| Sbjct: 355 gtatccgactacgcacagatggaccgcatcctacgtgaggagcgcaattatatccttggg 414 Query: 141 atggttaagaagatcaaggcgtctggatgcaacgtcctcctcatccagaagagcatcttg 200 ||||| || |||||||||||| |||||||||| || | ||||| ||||||||||||||| Sbjct: 415 atggtcaaaaagatcaaggcggctggatgcaatgtattgctcattcagaagagcatcttg 474 Query: 201 cgtgatgcggtgactgagttgtcgctgcattatctcgcaaaggctaagattctggtggtc 260 |||||||| || ||||| ||||| ||||| ||||| || ||||| |||||||||||||| Sbjct: 475 cgtgatgcagtcactgacttgtctctgcactatcttgctaaggcaaagattctggtggtg 534 Query: 261 aaggatgtggagagggac-gagattgagttcatcaccaagactctcaactgcctgccaat 319 ||||| ||||||||||| ||||| ||||||||||||||||| || |||||||| || || Sbjct: 535 aaggacgtggagagggaatgagatggagttcatcaccaagaccctaaactgccttcccat 594 Query: 320 tgccaacattgagcatttccgtgaggataaacttgggtatgctgatgttgtcgaggaagt 379 ||||||||||||||| ||||| |||||| |||||||||| |||||||| |||||||| Sbjct: 595 tgccaacattgagcacttccgcacggataagtttgggtatgcagatgttgttgaggaagt 654 Query: 380 gtctgccggagatggcaagattgtcaagatcactggcatcagggacatggggaggactgc 439 |||| ||||| |||||| |||| ||||||||||| |||| ||||||||| ||||| || Sbjct: 655 ctctgttggagagggcaaggttgtgaagatcactggaatcaaggacatgggtaggaccgc 714 Query: 440 aactgtgcttgtccgtgggtccaaccagttggttattgatgaagctgaccgcagtctcca 499 |||||| |||||| | || || ||||| |||||||||||||||||||| ||||||||||| Sbjct: 715 aactgtacttgtcaggggatctaaccaattggttattgatgaagctgaacgcagtctcca 774 Query: 500 tgatgccctttgtgtcatcaggtgcttggtgaacaagaggtttctaattgctggtggcgg 559 |||||| || |||||||| ||||||||||| | |||||| ||| | ||||||||||| || Sbjct: 775 tgatgcactctgtgtcataaggtgcttggtcagcaagagatttttgattgctggtggtgg 834 Query: 560 tgctcctgaaatagaaatgtcaatgcaactggctgcttggtcaaaggagctccatgggat 619 |||||| |||||||| ||||||||||| |||||||||||| |||||||||| | ||||| Sbjct: 835 tgctccagaaatagagatgtcaatgcagctggctgcttgggcaaaggagcttcgagggat 894 Query: 620 ggagagttactgcatcaaggagtttgctgatgcacttga 658 |||||||||||||||||||||||||||||| || ||||| Sbjct: 895 ggagagttactgcatcaaggagtttgctgaggcgcttga 933
>gb|AY104979.1| Zea mays PCO112869 mRNA sequence Length = 1979 Score = 591 bits (298), Expect = e-165 Identities = 553/638 (86%) Strand = Plus / Plus Query: 21 atcgctgtcatccagtttcagatctcgccgcccaagactgatattgagcagagcgtcatc 80 ||||||||||| ||||| || ||||| || || |||||||| ||||||||||| ||||| Sbjct: 881 atcgctgtcatacagttccaaatctcaccacctaagactgacattgagcagagtgtcatt 940 Query: 81 gtgtcagactatgcgcagatggaccgcatcctccgcgaggagcgcaattacatcctaggg 140 || || |||||||| |||||||||||||| || || |||||||||||||| ||||| ||| Sbjct: 941 gtatcggactatgcacagatggaccgcatactacgtgaggagcgcaattatatcctcggg 1000 Query: 141 atggttaagaagatcaaggcgtctggatgcaacgtcctcctcatccagaagagcatcttg 200 ||||| ||||||||||| || |||||||||| || | ||||| ||||||||||||||| Sbjct: 1001 atggtcaagaagatcaaagctgctggatgcaatgttttgctcattcagaagagcatcttg 1060 Query: 201 cgtgatgcggtgactgagttgtcgctgcattatctcgcaaaggctaagattctggtggtc 260 || || ||||| ||||| ||||| ||||| ||||| || ||||| |||||||||||||| Sbjct: 1061 cgcgacgcggtcactgacttgtctctgcactatcttgctaaggcaaagattctggtggtg 1120 Query: 261 aaggatgtggagagggacgagattgagttcatcaccaagactctcaactgcctgccaatt 320 ||||| ||||||||||| ||||| ||||||||||||||||| || |||||||| || ||| Sbjct: 1121 aaggacgtggagagggatgagatggagttcatcaccaagaccctaaactgccttcccatt 1180 Query: 321 gccaacattgagcatttccgtgaggataaacttgggtatgctgatgttgtcgaggaagtg 380 |||||||||||||| ||||| |||||| |||||||||| |||||||| |||||||| Sbjct: 1181 gccaacattgagcacttccgcacggataagtttgggtatgcagatgttgttgaggaagtc 1240 Query: 381 tctgccggagatggcaagattgtcaagatcactggcatcagggacatggggaggactgca 440 |||| ||||| |||||| |||| ||||||||||| |||| ||||||||| ||||| ||| Sbjct: 1241 tctgttggagagggcaaggttgtgaagatcactggaatcaaggacatgggtaggaccgca 1300 Query: 441 actgtgcttgtccgtgggtccaaccagttggttattgatgaagctgaccgcagtctccat 500 ||||| |||||| | || || ||||| |||||||||||||||||||| || ||||||||| Sbjct: 1301 actgtacttgtcaggggatctaaccaattggttattgatgaagctgaacgtagtctccat 1360 Query: 501 gatgccctttgtgtcatcaggtgcttggtgaacaagaggtttctaattgctggtggcggt 560 ||||| || |||||||| ||||||||||| |||||||||||| | ||||||||||| ||| Sbjct: 1361 gatgcactctgtgtcataaggtgcttggtcaacaagaggtttttgattgctggtggtggt 1420 Query: 561 gctcctgaaatagaaatgtcaatgcaactggctgcttggtcaaaggagctccatgggatg 620 ||||| |||||||| ||||||||||| |||||||||||| |||||||||| | |||||| Sbjct: 1421 gctccagaaatagagatgtcaatgcagctggctgcttgggcaaaggagcttcgagggatg 1480 Query: 621 gagagttactgcatcaaggagtttgctgatgcacttga 658 ||||||||||||||||||||||||||||| || ||||| Sbjct: 1481 gagagttactgcatcaaggagtttgctgaggcgcttga 1518
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 476 bits (240), Expect = e-131 Identities = 414/472 (87%) Strand = Plus / Minus Query: 51 cccaagactgatattgagcagagcgtcatcgtgtcagactatgcgcagatggaccgcatc 110 |||||||| || || |||||||| |||||||| ||||| || ||||||||||| |||||| Sbjct: 13564196 cccaagacagacatcgagcagagtgtcatcgtatcagattacgcgcagatggatcgcatc 13564137 Query: 111 ctccgcgaggagcgcaattacatcctagggatggttaagaagatcaaggcgtctggatgc 170 ||||| ||||||||||||||||| || |||||||| |||||||||||||| ||||||||| Sbjct: 13564136 ctccgtgaggagcgcaattacattcttgggatggtgaagaagatcaaggcttctggatgc 13564077 Query: 171 aacgtcctcctcatccagaagagcatcttgcgtgatgcggtgactgagttgtcgctgcat 230 || || || ||||| ||||| ||||||||||||||||| || ||||| ||||| || ||| Sbjct: 13564076 aatgttctgctcattcagaaaagcatcttgcgtgatgcagttactgatttgtcacttcat 13564017 Query: 231 tatctcgcaaaggctaagattctggtggtcaaggatgtggagagggacgagattgagttc 290 ||||| |||||||||||||| ||||| || ||||||||||||||||| |||||||||||| Sbjct: 13564016 tatcttgcaaaggctaagatcctggttgtgaaggatgtggagagggatgagattgagttc 13563957 Query: 291 atcaccaagactctcaactgcctgccaattgccaacattgagcatttccgtgaggataaa 350 ||||||||||| || ||||||||||||||||| ||||| || |||||||||||||| || Sbjct: 13563956 atcaccaagaccctgaactgcctgccaattgctaacatcgaacatttccgtgaggacaag 13563897 Query: 351 cttgggtatgctgatgttgtcgaggaagtgtctgccggagatggcaagattgtcaagatc 410 ||||| ||||| ||| |||| |||||||| |||| || || ||||||||||||||||| Sbjct: 13563896 cttggttatgcagatcttgttgaggaagtttctgttggggagagcaagattgtcaagatc 13563837 Query: 411 actggcatcagggacatggggaggactgcaactgtgcttgtccgtgggtccaaccagttg 470 | ||||| | ||| ||||| ||||| || |||||||||||||| |||||||||||||| Sbjct: 13563836 atgggcattaaggatatgggaaggacagctactgtgcttgtccgggggtccaaccagtta 13563777 Query: 471 gttattgatgaagctgaccgcagtctccatgatgccctttgtgtcatcaggt 522 || |||||||||||||| |||||||| ||||||||||||||||||||||||| Sbjct: 13563776 gtaattgatgaagctgagcgcagtcttcatgatgccctttgtgtcatcaggt 13563725 Score = 194 bits (98), Expect = 3e-46 Identities = 131/142 (92%) Strand = Plus / Minus Query: 517 tcaggtgcttggtgaacaagaggtttctaattgctggtggcggtgctcctgaaatagaaa 576 |||||||||||||||||||||||||| | ||||||||||| ||||| || |||||||| | Sbjct: 13560626 tcaggtgcttggtgaacaagaggtttttgattgctggtggtggtgcaccagaaatagaga 13560567 Query: 577 tgtcaatgcaactggctgcttggtcaaaggagctccatgggatggagagttactgcatca 636 |||||||||| || ||||||||| ||||||||||||| |||||||||||||||||||||| Sbjct: 13560566 tgtcaatgcagcttgctgcttgggcaaaggagctccaagggatggagagttactgcatca 13560507 Query: 637 aggagtttgctgatgcacttga 658 ||||||||||||| |||||||| Sbjct: 13560506 aggagtttgctgaggcacttga 13560485
>dbj|AP005865.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0037J12 Length = 118553 Score = 476 bits (240), Expect = e-131 Identities = 414/472 (87%) Strand = Plus / Minus Query: 51 cccaagactgatattgagcagagcgtcatcgtgtcagactatgcgcagatggaccgcatc 110 |||||||| || || |||||||| |||||||| ||||| || ||||||||||| |||||| Sbjct: 79501 cccaagacagacatcgagcagagtgtcatcgtatcagattacgcgcagatggatcgcatc 79442 Query: 111 ctccgcgaggagcgcaattacatcctagggatggttaagaagatcaaggcgtctggatgc 170 ||||| ||||||||||||||||| || |||||||| |||||||||||||| ||||||||| Sbjct: 79441 ctccgtgaggagcgcaattacattcttgggatggtgaagaagatcaaggcttctggatgc 79382 Query: 171 aacgtcctcctcatccagaagagcatcttgcgtgatgcggtgactgagttgtcgctgcat 230 || || || ||||| ||||| ||||||||||||||||| || ||||| ||||| || ||| Sbjct: 79381 aatgttctgctcattcagaaaagcatcttgcgtgatgcagttactgatttgtcacttcat 79322 Query: 231 tatctcgcaaaggctaagattctggtggtcaaggatgtggagagggacgagattgagttc 290 ||||| |||||||||||||| ||||| || ||||||||||||||||| |||||||||||| Sbjct: 79321 tatcttgcaaaggctaagatcctggttgtgaaggatgtggagagggatgagattgagttc 79262 Query: 291 atcaccaagactctcaactgcctgccaattgccaacattgagcatttccgtgaggataaa 350 ||||||||||| || ||||||||||||||||| ||||| || |||||||||||||| || Sbjct: 79261 atcaccaagaccctgaactgcctgccaattgctaacatcgaacatttccgtgaggacaag 79202 Query: 351 cttgggtatgctgatgttgtcgaggaagtgtctgccggagatggcaagattgtcaagatc 410 ||||| ||||| ||| |||| |||||||| |||| || || ||||||||||||||||| Sbjct: 79201 cttggttatgcagatcttgttgaggaagtttctgttggggagagcaagattgtcaagatc 79142 Query: 411 actggcatcagggacatggggaggactgcaactgtgcttgtccgtgggtccaaccagttg 470 | ||||| | ||| ||||| ||||| || |||||||||||||| |||||||||||||| Sbjct: 79141 atgggcattaaggatatgggaaggacagctactgtgcttgtccgggggtccaaccagtta 79082 Query: 471 gttattgatgaagctgaccgcagtctccatgatgccctttgtgtcatcaggt 522 || |||||||||||||| |||||||| ||||||||||||||||||||||||| Sbjct: 79081 gtaattgatgaagctgagcgcagtcttcatgatgccctttgtgtcatcaggt 79030 Score = 194 bits (98), Expect = 3e-46 Identities = 131/142 (92%) Strand = Plus / Minus Query: 517 tcaggtgcttggtgaacaagaggtttctaattgctggtggcggtgctcctgaaatagaaa 576 |||||||||||||||||||||||||| | ||||||||||| ||||| || |||||||| | Sbjct: 75931 tcaggtgcttggtgaacaagaggtttttgattgctggtggtggtgcaccagaaatagaga 75872 Query: 577 tgtcaatgcaactggctgcttggtcaaaggagctccatgggatggagagttactgcatca 636 |||||||||| || ||||||||| ||||||||||||| |||||||||||||||||||||| Sbjct: 75871 tgtcaatgcagcttgctgcttgggcaaaggagctccaagggatggagagttactgcatca 75812 Query: 637 aggagtttgctgatgcacttga 658 ||||||||||||| |||||||| Sbjct: 75811 aggagtttgctgaggcacttga 75790
>dbj|AK059413.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-027-D02, full insert sequence Length = 836 Score = 367 bits (185), Expect = 3e-98 Identities = 302/341 (88%) Strand = Plus / Plus Query: 318 attgccaacattgagcatttccgtgaggataaacttgggtatgctgatgttgtcgaggaa 377 ||||| ||||| || |||||||||||||| || ||||| ||||| ||| |||| |||||| Sbjct: 1 attgctaacatcgaacatttccgtgaggacaagcttggttatgcagatcttgttgaggaa 60 Query: 378 gtgtctgccggagatggcaagattgtcaagatcactggcatcagggacatggggaggact 437 || |||| || || |||||||||||||||||| ||||| | ||| ||||| ||||| Sbjct: 61 gtttctgttggggagagcaagattgtcaagatcatgggcattaaggatatgggaaggaca 120 Query: 438 gcaactgtgcttgtccgtgggtccaaccagttggttattgatgaagctgaccgcagtctc 497 || |||||||||||||| |||||||||||||| || |||||||||||||| |||||||| Sbjct: 121 gctactgtgcttgtccgggggtccaaccagttagtaattgatgaagctgagcgcagtctt 180 Query: 498 catgatgccctttgtgtcatcaggtgcttggtgaacaagaggtttctaattgctggtggc 557 ||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||| Sbjct: 181 catgatgccctttgtgtcatcaggtgcttggtgaacaagaggtttttgattgctggtggt 240 Query: 558 ggtgctcctgaaatagaaatgtcaatgcaactggctgcttggtcaaaggagctccatggg 617 ||||| || |||||||| ||||||||||| || ||||||||| ||||||||||||| ||| Sbjct: 241 ggtgcaccagaaatagagatgtcaatgcagcttgctgcttgggcaaaggagctccaaggg 300 Query: 618 atggagagttactgcatcaaggagtttgctgatgcacttga 658 |||||||||||||||||||||||||||||||| |||||||| Sbjct: 301 atggagagttactgcatcaaggagtttgctgaggcacttga 341
>ref|NM_197338.1| Oryza sativa (japonica cultivar-group) putative cytosolic chaperonin, delta-subunit (OSJNBa0026L12.9), mRNA Length = 1626 Score = 283 bits (143), Expect = 4e-73 Identities = 287/335 (85%) Strand = Plus / Plus Query: 21 atcgctgtcatccagtttcagatctcgccgcccaagactgatattgagcagagcgtcatc 80 ||||| || |||||||| ||| ||||||| |||||||| || || ||||| |||||| || Sbjct: 736 atcgccgtgatccagttccaggtctcgcctcccaagacggacatcgagcacagcgtcgtc 795 Query: 81 gtgtcagactatgcgcagatggaccgcatcctccgcgaggagcgcaattacatcctaggg 140 ||||| || || ||||||||||| || ||||||||||||||||| ||||||||||| || Sbjct: 796 gtgtcggattacgcgcagatggatcgaatcctccgcgaggagcggaattacatccttggc 855 Query: 141 atggttaagaagatcaaggcgtctggatgcaacgtcctcctcatccagaagagcatcttg 200 ||||| |||||||||||||| || |||||||||||||| ||||||||||| |||||| || Sbjct: 856 atggtgaagaagatcaaggcatccggatgcaacgtcctgctcatccagaaaagcatcctg 915 Query: 201 cgtgatgcggtgactgagttgtcgctgcattatctcgcaaaggctaagattctggtggtc 260 |||||| | || || || ||||||| ||||||||||||||||| ||||| |||| || Sbjct: 916 cgtgattcagtcaccgatctgtcgctccattatctcgcaaaggccaagatcatggtcgtg 975 Query: 261 aaggatgtggagagggacgagattgagttcatcaccaagactctcaactgcctgccaatt 320 |||||||| |||||||||||||| ||||||||||||||||| ||||||||| |||||||| Sbjct: 976 aaggatgtcgagagggacgagatcgagttcatcaccaagaccctcaactgcatgccaatt 1035 Query: 321 gccaacattgagcatttccgtgaggataaacttgg 355 || | ||| || ||| |||| ||||| || ||||| Sbjct: 1036 gctagcatcgaacatctccgcgaggacaagcttgg 1070 Score = 200 bits (101), Expect = 4e-48 Identities = 212/249 (85%) Strand = Plus / Plus Query: 395 caagattgtcaagatcactggcatcagggacatggggaggactgcaactgtgcttgtccg 454 |||||||||||||||||||||||||| | ||||||| || || |||||||| |||||||| Sbjct: 1119 caagattgtcaagatcactggcatcaagaacatgggaagaacagcaactgttcttgtccg 1178 Query: 455 tgggtccaaccagttggttattgatgaagctgaccgcagtctccatgatgccctttgtgt 514 || ||||||||| |||| || || |||||| | ||||| ||||| || || | ||||| Sbjct: 1179 gggatccaaccagatggtgatcgacgaagctcagcgcagcctccacgacgcattctgtgt 1238 Query: 515 catcaggtgcttggtgaacaagaggtttctaattgctggtggcggtgctcctgaaataga 574 ||||||||||||||||||||||||||||| || |||||||| ||||||||||| || || Sbjct: 1239 gatcaggtgcttggtgaacaagaggtttctgatcgctggtggtggtgctcctgagatcga 1298 Query: 575 aatgtcaatgcaactggctgcttggtcaaaggagctccatgggatggagagttactgcat 634 ||||| ||||| |||||||||||| | |||||||| |||||||||||||||||| | Sbjct: 1299 gatgtcgatgcagctggctgcttgggcgaaggagctgagagggatggagagttactgcgt 1358 Query: 635 caaggagtt 643 || |||||| Sbjct: 1359 cagggagtt 1367
>gb|AC068924.11| Oryza sativa chromosome 10 BAC OSJNBa0026L12 genomic sequence, complete sequence Length = 152172 Score = 283 bits (143), Expect = 4e-73 Identities = 287/335 (85%) Strand = Plus / Plus Query: 21 atcgctgtcatccagtttcagatctcgccgcccaagactgatattgagcagagcgtcatc 80 ||||| || |||||||| ||| ||||||| |||||||| || || ||||| |||||| || Sbjct: 53879 atcgccgtgatccagttccaggtctcgcctcccaagacggacatcgagcacagcgtcgtc 53938 Query: 81 gtgtcagactatgcgcagatggaccgcatcctccgcgaggagcgcaattacatcctaggg 140 ||||| || || ||||||||||| || ||||||||||||||||| ||||||||||| || Sbjct: 53939 gtgtcggattacgcgcagatggatcgaatcctccgcgaggagcggaattacatccttggc 53998 Query: 141 atggttaagaagatcaaggcgtctggatgcaacgtcctcctcatccagaagagcatcttg 200 ||||| |||||||||||||| || |||||||||||||| ||||||||||| |||||| || Sbjct: 53999 atggtgaagaagatcaaggcatccggatgcaacgtcctgctcatccagaaaagcatcctg 54058 Query: 201 cgtgatgcggtgactgagttgtcgctgcattatctcgcaaaggctaagattctggtggtc 260 |||||| | || || || ||||||| ||||||||||||||||| ||||| |||| || Sbjct: 54059 cgtgattcagtcaccgatctgtcgctccattatctcgcaaaggccaagatcatggtcgtg 54118 Query: 261 aaggatgtggagagggacgagattgagttcatcaccaagactctcaactgcctgccaatt 320 |||||||| |||||||||||||| ||||||||||||||||| ||||||||| |||||||| Sbjct: 54119 aaggatgtcgagagggacgagatcgagttcatcaccaagaccctcaactgcatgccaatt 54178 Query: 321 gccaacattgagcatttccgtgaggataaacttgg 355 || | ||| || ||| |||| ||||| || ||||| Sbjct: 54179 gctagcatcgaacatctccgcgaggacaagcttgg 54213 Score = 200 bits (101), Expect = 4e-48 Identities = 212/249 (85%) Strand = Plus / Plus Query: 395 caagattgtcaagatcactggcatcagggacatggggaggactgcaactgtgcttgtccg 454 |||||||||||||||||||||||||| | ||||||| || || |||||||| |||||||| Sbjct: 54262 caagattgtcaagatcactggcatcaagaacatgggaagaacagcaactgttcttgtccg 54321 Query: 455 tgggtccaaccagttggttattgatgaagctgaccgcagtctccatgatgccctttgtgt 514 || ||||||||| |||| || || |||||| | ||||| ||||| || || | ||||| Sbjct: 54322 gggatccaaccagatggtgatcgacgaagctcagcgcagcctccacgacgcattctgtgt 54381 Query: 515 catcaggtgcttggtgaacaagaggtttctaattgctggtggcggtgctcctgaaataga 574 ||||||||||||||||||||||||||||| || |||||||| ||||||||||| || || Sbjct: 54382 gatcaggtgcttggtgaacaagaggtttctgatcgctggtggtggtgctcctgagatcga 54441 Query: 575 aatgtcaatgcaactggctgcttggtcaaaggagctccatgggatggagagttactgcat 634 ||||| ||||| |||||||||||| | |||||||| |||||||||||||||||| | Sbjct: 54442 gatgtcgatgcagctggctgcttgggcgaaggagctgagagggatggagagttactgcgt 54501 Query: 635 caaggagtt 643 || |||||| Sbjct: 54502 cagggagtt 54510
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 283 bits (143), Expect = 4e-73 Identities = 287/335 (85%) Strand = Plus / Minus Query: 21 atcgctgtcatccagtttcagatctcgccgcccaagactgatattgagcagagcgtcatc 80 ||||| || |||||||| ||| ||||||| |||||||| || || ||||| |||||| || Sbjct: 19322502 atcgccgtgatccagttccaggtctcgcctcccaagacggacatcgagcacagcgtcgtc 19322443 Query: 81 gtgtcagactatgcgcagatggaccgcatcctccgcgaggagcgcaattacatcctaggg 140 ||||| || || ||||||||||| || ||||||||||||||||| ||||||||||| || Sbjct: 19322442 gtgtcggattacgcgcagatggatcgaatcctccgcgaggagcggaattacatccttggc 19322383 Query: 141 atggttaagaagatcaaggcgtctggatgcaacgtcctcctcatccagaagagcatcttg 200 ||||| |||||||||||||| || |||||||||||||| ||||||||||| |||||| || Sbjct: 19322382 atggtgaagaagatcaaggcatccggatgcaacgtcctgctcatccagaaaagcatcctg 19322323 Query: 201 cgtgatgcggtgactgagttgtcgctgcattatctcgcaaaggctaagattctggtggtc 260 |||||| | || || || ||||||| ||||||||||||||||| ||||| |||| || Sbjct: 19322322 cgtgattcagtcaccgatctgtcgctccattatctcgcaaaggccaagatcatggtcgtg 19322263 Query: 261 aaggatgtggagagggacgagattgagttcatcaccaagactctcaactgcctgccaatt 320 |||||||| |||||||||||||| ||||||||||||||||| ||||||||| |||||||| Sbjct: 19322262 aaggatgtcgagagggacgagatcgagttcatcaccaagaccctcaactgcatgccaatt 19322203 Query: 321 gccaacattgagcatttccgtgaggataaacttgg 355 || | ||| || ||| |||| ||||| || ||||| Sbjct: 19322202 gctagcatcgaacatctccgcgaggacaagcttgg 19322168 Score = 200 bits (101), Expect = 4e-48 Identities = 212/249 (85%) Strand = Plus / Minus Query: 395 caagattgtcaagatcactggcatcagggacatggggaggactgcaactgtgcttgtccg 454 |||||||||||||||||||||||||| | ||||||| || || |||||||| |||||||| Sbjct: 19322119 caagattgtcaagatcactggcatcaagaacatgggaagaacagcaactgttcttgtccg 19322060 Query: 455 tgggtccaaccagttggttattgatgaagctgaccgcagtctccatgatgccctttgtgt 514 || ||||||||| |||| || || |||||| | ||||| ||||| || || | ||||| Sbjct: 19322059 gggatccaaccagatggtgatcgacgaagctcagcgcagcctccacgacgcattctgtgt 19322000 Query: 515 catcaggtgcttggtgaacaagaggtttctaattgctggtggcggtgctcctgaaataga 574 ||||||||||||||||||||||||||||| || |||||||| ||||||||||| || || Sbjct: 19321999 gatcaggtgcttggtgaacaagaggtttctgatcgctggtggtggtgctcctgagatcga 19321940 Query: 575 aatgtcaatgcaactggctgcttggtcaaaggagctccatgggatggagagttactgcat 634 ||||| ||||| |||||||||||| | |||||||| |||||||||||||||||| | Sbjct: 19321939 gatgtcgatgcagctggctgcttgggcgaaggagctgagagggatggagagttactgcgt 19321880 Query: 635 caaggagtt 643 || |||||| Sbjct: 19321879 cagggagtt 19321871
>dbj|AK070291.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023052I10, full insert sequence Length = 1849 Score = 283 bits (143), Expect = 4e-73 Identities = 287/335 (85%) Strand = Plus / Plus Query: 21 atcgctgtcatccagtttcagatctcgccgcccaagactgatattgagcagagcgtcatc 80 ||||| || |||||||| ||| ||||||| |||||||| || || ||||| |||||| || Sbjct: 790 atcgccgtgatccagttccaggtctcgcctcccaagacggacatcgagcacagcgtcgtc 849 Query: 81 gtgtcagactatgcgcagatggaccgcatcctccgcgaggagcgcaattacatcctaggg 140 ||||| || || ||||||||||| || ||||||||||||||||| ||||||||||| || Sbjct: 850 gtgtcggattacgcgcagatggatcgaatcctccgcgaggagcggaattacatccttggc 909 Query: 141 atggttaagaagatcaaggcgtctggatgcaacgtcctcctcatccagaagagcatcttg 200 ||||| |||||||||||||| || |||||||||||||| ||||||||||| |||||| || Sbjct: 910 atggtgaagaagatcaaggcatccggatgcaacgtcctgctcatccagaaaagcatcctg 969 Query: 201 cgtgatgcggtgactgagttgtcgctgcattatctcgcaaaggctaagattctggtggtc 260 |||||| | || || || ||||||| ||||||||||||||||| ||||| |||| || Sbjct: 970 cgtgattcagtcaccgatctgtcgctccattatctcgcaaaggccaagatcatggtcgtg 1029 Query: 261 aaggatgtggagagggacgagattgagttcatcaccaagactctcaactgcctgccaatt 320 |||||||| |||||||||||||| ||||||||||||||||| ||||||||| |||||||| Sbjct: 1030 aaggatgtcgagagggacgagatcgagttcatcaccaagaccctcaactgcatgccaatt 1089 Query: 321 gccaacattgagcatttccgtgaggataaacttgg 355 || | ||| || ||| |||| ||||| || ||||| Sbjct: 1090 gctagcatcgaacatctccgcgaggacaagcttgg 1124 Score = 200 bits (101), Expect = 4e-48 Identities = 212/249 (85%) Strand = Plus / Plus Query: 395 caagattgtcaagatcactggcatcagggacatggggaggactgcaactgtgcttgtccg 454 |||||||||||||||||||||||||| | ||||||| || || |||||||| |||||||| Sbjct: 1173 caagattgtcaagatcactggcatcaagaacatgggaagaacagcaactgttcttgtccg 1232 Query: 455 tgggtccaaccagttggttattgatgaagctgaccgcagtctccatgatgccctttgtgt 514 || ||||||||| |||| || || |||||| | ||||| ||||| || || | ||||| Sbjct: 1233 gggatccaaccagatggtgatcgacgaagctcagcgcagcctccacgacgcattctgtgt 1292 Query: 515 catcaggtgcttggtgaacaagaggtttctaattgctggtggcggtgctcctgaaataga 574 ||||||||||||||||||||||||||||| || |||||||| ||||||||||| || || Sbjct: 1293 gatcaggtgcttggtgaacaagaggtttctgatcgctggtggtggtgctcctgagatcga 1352 Query: 575 aatgtcaatgcaactggctgcttggtcaaaggagctccatgggatggagagttactgcat 634 ||||| ||||| |||||||||||| | |||||||| |||||||||||||||||| | Sbjct: 1353 gatgtcgatgcagctggctgcttgggcgaaggagctgagagggatggagagttactgcgt 1412 Query: 635 caaggagtt 643 || |||||| Sbjct: 1413 cagggagtt 1421
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 283 bits (143), Expect = 4e-73 Identities = 287/335 (85%) Strand = Plus / Minus Query: 21 atcgctgtcatccagtttcagatctcgccgcccaagactgatattgagcagagcgtcatc 80 ||||| || |||||||| ||| ||||||| |||||||| || || ||||| |||||| || Sbjct: 19333778 atcgccgtgatccagttccaggtctcgcctcccaagacggacatcgagcacagcgtcgtc 19333719 Query: 81 gtgtcagactatgcgcagatggaccgcatcctccgcgaggagcgcaattacatcctaggg 140 ||||| || || ||||||||||| || ||||||||||||||||| ||||||||||| || Sbjct: 19333718 gtgtcggattacgcgcagatggatcgaatcctccgcgaggagcggaattacatccttggc 19333659 Query: 141 atggttaagaagatcaaggcgtctggatgcaacgtcctcctcatccagaagagcatcttg 200 ||||| |||||||||||||| || |||||||||||||| ||||||||||| |||||| || Sbjct: 19333658 atggtgaagaagatcaaggcatccggatgcaacgtcctgctcatccagaaaagcatcctg 19333599 Query: 201 cgtgatgcggtgactgagttgtcgctgcattatctcgcaaaggctaagattctggtggtc 260 |||||| | || || || ||||||| ||||||||||||||||| ||||| |||| || Sbjct: 19333598 cgtgattcagtcaccgatctgtcgctccattatctcgcaaaggccaagatcatggtcgtg 19333539 Query: 261 aaggatgtggagagggacgagattgagttcatcaccaagactctcaactgcctgccaatt 320 |||||||| |||||||||||||| ||||||||||||||||| ||||||||| |||||||| Sbjct: 19333538 aaggatgtcgagagggacgagatcgagttcatcaccaagaccctcaactgcatgccaatt 19333479 Query: 321 gccaacattgagcatttccgtgaggataaacttgg 355 || | ||| || ||| |||| ||||| || ||||| Sbjct: 19333478 gctagcatcgaacatctccgcgaggacaagcttgg 19333444 Score = 200 bits (101), Expect = 4e-48 Identities = 212/249 (85%) Strand = Plus / Minus Query: 395 caagattgtcaagatcactggcatcagggacatggggaggactgcaactgtgcttgtccg 454 |||||||||||||||||||||||||| | ||||||| || || |||||||| |||||||| Sbjct: 19333395 caagattgtcaagatcactggcatcaagaacatgggaagaacagcaactgttcttgtccg 19333336 Query: 455 tgggtccaaccagttggttattgatgaagctgaccgcagtctccatgatgccctttgtgt 514 || ||||||||| |||| || || |||||| | ||||| ||||| || || | ||||| Sbjct: 19333335 gggatccaaccagatggtgatcgacgaagctcagcgcagcctccacgacgcattctgtgt 19333276 Query: 515 catcaggtgcttggtgaacaagaggtttctaattgctggtggcggtgctcctgaaataga 574 ||||||||||||||||||||||||||||| || |||||||| ||||||||||| || || Sbjct: 19333275 gatcaggtgcttggtgaacaagaggtttctgatcgctggtggtggtgctcctgagatcga 19333216 Query: 575 aatgtcaatgcaactggctgcttggtcaaaggagctccatgggatggagagttactgcat 634 ||||| ||||| |||||||||||| | |||||||| |||||||||||||||||| | Sbjct: 19333215 gatgtcgatgcagctggctgcttgggcgaaggagctgagagggatggagagttactgcgt 19333156 Query: 635 caaggagtt 643 || |||||| Sbjct: 19333155 cagggagtt 19333147
>emb|AJ012318.1|GMA012318 Glycine max cctd gene Length = 1602 Score = 95.6 bits (48), Expect = 2e-16 Identities = 126/152 (82%) Strand = Plus / Plus Query: 186 cagaagagcatcttgcgtgatgcggtgactgagttgtcgctgcattatctcgcaaaggct 245 |||||||| || ||| | |||||||| ||||| ||| | ||||||| || || || ||| Sbjct: 886 cagaagagtattttgagggatgcggttactgatttggccttgcattaccttgccaaagct 945 Query: 246 aagattctggtggtcaaggatgtggagagggacgagattgagttcatcaccaagactctc 305 |||||| |||| | ||||||||||||||||| |||||||||||||| |||||||| || Sbjct: 946 aagattttggtcattaaggatgtggagagggatgagattgagttcattaccaagacactg 1005 Query: 306 aactgcctgccaattgccaacattgagcattt 337 || || |||| ||||| |||||||||||||| Sbjct: 1006 aattgtttgcccattgctaacattgagcattt 1037 Score = 46.1 bits (23), Expect = 0.15 Identities = 59/71 (83%) Strand = Plus / Plus Query: 390 gatggcaagattgtcaagatcactggcatcagggacatggggaggactgcaactgtgctt 449 ||||| |||||||| ||||| ||||| || | ||| ||||||| ||| | ||||||||| Sbjct: 1090 gatgggaagattgtgaagattactgggattaaggagatggggaagaccaccactgtgctt 1149 Query: 450 gtccgtgggtc 460 || |||||||| Sbjct: 1150 gtacgtgggtc 1160
>emb|AJ583803.1| Glycine max cctd gene for cytosolic chaperonin delta-subunit, cultivar Cuc Vang Length = 1602 Score = 95.6 bits (48), Expect = 2e-16 Identities = 126/152 (82%) Strand = Plus / Plus Query: 186 cagaagagcatcttgcgtgatgcggtgactgagttgtcgctgcattatctcgcaaaggct 245 |||||||| || ||| | ||||| || ||||| ||||| ||||||| || || || ||| Sbjct: 886 cagaagagtattttgagggatgctgttactgatttgtccttgcattaccttgccaaagct 945 Query: 246 aagattctggtggtcaaggatgtggagagggacgagattgagttcatcaccaagactctc 305 |||||| |||| | ||||||||||||||||| |||||||||||||| |||||||| || Sbjct: 946 aagattttggtcattaaggatgtggagagggatgagattgagttcattaccaagacactg 1005 Query: 306 aactgcctgccaattgccaacattgagcattt 337 || || |||| ||||| |||||||||||||| Sbjct: 1006 aattgtttgcccattgctaacattgagcattt 1037 Score = 46.1 bits (23), Expect = 0.15 Identities = 59/71 (83%) Strand = Plus / Plus Query: 390 gatggcaagattgtcaagatcactggcatcagggacatggggaggactgcaactgtgctt 449 ||||| |||||||| ||||| ||||| || | ||| ||||||| ||| | ||||||||| Sbjct: 1090 gatgggaagattgtgaagattactgggattaaggagatggggaagaccaccactgtgctt 1149 Query: 450 gtccgtgggtc 460 || |||||||| Sbjct: 1150 gtacgtgggtc 1160
>ref|NM_112702.2| Arabidopsis thaliana ATP binding / protein binding AT3G18190 mRNA, complete cds Length = 1935 Score = 89.7 bits (45), Expect = 1e-14 Identities = 195/245 (79%) Strand = Plus / Plus Query: 243 gctaagattctggtggtcaaggatgtggagagggacgagattgagttcatcaccaagact 302 ||||||||| |||| | |||||||| ||||| || |||||||| || |||||||||| Sbjct: 1052 gctaagattatggttattaaggatgttgagagagatgagattgaatttgtcaccaagaca 1111 Query: 303 ctcaactgcctgccaattgccaacattgagcatttccgtgaggataaacttgggtatgct 362 | |||||| |||| || ||||| |||||||||||| | | || || ||||| ||||| Sbjct: 1112 ttgaactgcttgcctatcgccaatattgagcatttcagagctgagaagcttggccatgct 1171 Query: 363 gatgttgtcgaggaagtgtctgccggagatggcaagattgtcaagatcactggcatcagg 422 ||| |||| ||||| | || |||||||| |||||| | ||||||||||| |||| | Sbjct: 1172 gatcttgttgaggaggcctcccttggagatggaaagattttgaagatcactggtatcaag 1231 Query: 423 gacatggggaggactgcaactgtgcttgtccgtgggtccaaccagttggttattgatgaa 482 ||||||||||| ||| || |||| || || ||||| ||||||||| | ||| | |||||| Sbjct: 1232 gacatggggagaactacatctgttctagttcgtggctccaaccagcttgttctagatgaa 1291 Query: 483 gctga 487 ||||| Sbjct: 1292 gctga 1296 Score = 44.1 bits (22), Expect = 0.58 Identities = 43/50 (86%) Strand = Plus / Plus Query: 24 gctgtcatccagtttcagatctcgccgcccaagactgatattgagcagag 73 ||||| || ||||| |||||||| || || ||||||||||| |||||||| Sbjct: 833 gctgtgattcagttccagatctcacctcctaagactgatatcgagcagag 882
>gb|AY099877.1| Arabidopsis thaliana chaperonin subunit, putative (At3g18190) mRNA, complete cds Length = 1908 Score = 89.7 bits (45), Expect = 1e-14 Identities = 195/245 (79%) Strand = Plus / Plus Query: 243 gctaagattctggtggtcaaggatgtggagagggacgagattgagttcatcaccaagact 302 ||||||||| |||| | |||||||| ||||| || |||||||| || |||||||||| Sbjct: 1026 gctaagattatggttattaaggatgttgagagagatgagattgaatttgtcaccaagaca 1085 Query: 303 ctcaactgcctgccaattgccaacattgagcatttccgtgaggataaacttgggtatgct 362 | |||||| |||| || ||||| |||||||||||| | | || || ||||| ||||| Sbjct: 1086 ttgaactgcttgcctatcgccaatattgagcatttcagagctgagaagcttggccatgct 1145 Query: 363 gatgttgtcgaggaagtgtctgccggagatggcaagattgtcaagatcactggcatcagg 422 ||| |||| ||||| | || |||||||| |||||| | ||||||||||| |||| | Sbjct: 1146 gatcttgttgaggaggcctcccttggagatggaaagattttgaagatcactggtatcaag 1205 Query: 423 gacatggggaggactgcaactgtgcttgtccgtgggtccaaccagttggttattgatgaa 482 ||||||||||| ||| || |||| || || ||||| ||||||||| | ||| | |||||| Sbjct: 1206 gacatggggagaactacatctgttctagttcgtggctccaaccagcttgttctagatgaa 1265 Query: 483 gctga 487 ||||| Sbjct: 1266 gctga 1270 Score = 44.1 bits (22), Expect = 0.58 Identities = 43/50 (86%) Strand = Plus / Plus Query: 24 gctgtcatccagtttcagatctcgccgcccaagactgatattgagcagag 73 ||||| || ||||| |||||||| || || ||||||||||| |||||||| Sbjct: 807 gctgtgattcagttccagatctcacctcctaagactgatatcgagcagag 856
>gb|AY093777.1| Arabidopsis thaliana AT3g18190/MRC8_18 mRNA sequence Length = 1821 Score = 89.7 bits (45), Expect = 1e-14 Identities = 195/245 (79%) Strand = Plus / Plus Query: 243 gctaagattctggtggtcaaggatgtggagagggacgagattgagttcatcaccaagact 302 ||||||||| |||| | |||||||| ||||| || |||||||| || |||||||||| Sbjct: 938 gctaagattatggttattaaggatgttgagagagatgagattgaatttgtcaccaagaca 997 Query: 303 ctcaactgcctgccaattgccaacattgagcatttccgtgaggataaacttgggtatgct 362 | |||||| |||| || ||||| |||||||||||| | | || || ||||| ||||| Sbjct: 998 ttgaactgcttgcctatcgccaatattgagcatttcagagctgagaagcttggccatgct 1057 Query: 363 gatgttgtcgaggaagtgtctgccggagatggcaagattgtcaagatcactggcatcagg 422 ||| |||| ||||| | || |||||||| |||||| | ||||||||||| |||| | Sbjct: 1058 gatcttgttgaggaggcctcccttggagatggaaagattttgaagatcactggtatcaag 1117 Query: 423 gacatggggaggactgcaactgtgcttgtccgtgggtccaaccagttggttattgatgaa 482 ||||||||||| ||| || |||| || || ||||| ||||||||| | ||| | |||||| Sbjct: 1118 gacatggggagaactacatctgttctagttcgtggctccaaccagcttgttctagatgaa 1177 Query: 483 gctga 487 ||||| Sbjct: 1178 gctga 1182 Score = 44.1 bits (22), Expect = 0.58 Identities = 43/50 (86%) Strand = Plus / Plus Query: 24 gctgtcatccagtttcagatctcgccgcccaagactgatattgagcagag 73 ||||| || ||||| |||||||| || || ||||||||||| |||||||| Sbjct: 719 gctgtgattcagttccagatctcacctcctaagactgatatcgagcagag 768
>gb|BT003418.1| Arabidopsis thaliana chaperonin subunit, putative (At3g18190) mRNA, complete cds Length = 1783 Score = 89.7 bits (45), Expect = 1e-14 Identities = 195/245 (79%) Strand = Plus / Plus Query: 243 gctaagattctggtggtcaaggatgtggagagggacgagattgagttcatcaccaagact 302 ||||||||| |||| | |||||||| ||||| || |||||||| || |||||||||| Sbjct: 952 gctaagattatggttattaaggatgttgagagagatgagattgaatttgtcaccaagaca 1011 Query: 303 ctcaactgcctgccaattgccaacattgagcatttccgtgaggataaacttgggtatgct 362 | |||||| |||| || ||||| |||||||||||| | | || || ||||| ||||| Sbjct: 1012 ttgaactgcttgcctatcgccaatattgagcatttcagagctgagaagcttggccatgct 1071 Query: 363 gatgttgtcgaggaagtgtctgccggagatggcaagattgtcaagatcactggcatcagg 422 ||| |||| ||||| | || |||||||| |||||| | ||||||||||| |||| | Sbjct: 1072 gatcttgttgaggaggcctcccttggagatggaaagattttgaagatcactggtatcaag 1131 Query: 423 gacatggggaggactgcaactgtgcttgtccgtgggtccaaccagttggttattgatgaa 482 ||||||||||| ||| || |||| || || ||||| ||||||||| | ||| | |||||| Sbjct: 1132 gacatggggagaactacatctgttctagttcgtggctccaaccagcttgttctagatgaa 1191 Query: 483 gctga 487 ||||| Sbjct: 1192 gctga 1196 Score = 44.1 bits (22), Expect = 0.58 Identities = 43/50 (86%) Strand = Plus / Plus Query: 24 gctgtcatccagtttcagatctcgccgcccaagactgatattgagcagag 73 ||||| || ||||| |||||||| || || ||||||||||| |||||||| Sbjct: 733 gctgtgattcagttccagatctcacctcctaagactgatatcgagcagag 782
>gb|AY088570.1| Arabidopsis thaliana clone 7925 mRNA, complete sequence Length = 1873 Score = 89.7 bits (45), Expect = 1e-14 Identities = 195/245 (79%) Strand = Plus / Plus Query: 243 gctaagattctggtggtcaaggatgtggagagggacgagattgagttcatcaccaagact 302 ||||||||| |||| | |||||||| ||||| || |||||||| || |||||||||| Sbjct: 1052 gctaagattatggttattaaggatgttgagagagatgagattgaatttgtcaccaagaca 1111 Query: 303 ctcaactgcctgccaattgccaacattgagcatttccgtgaggataaacttgggtatgct 362 | |||||| |||| || ||||| |||||||||||| | | || || ||||| ||||| Sbjct: 1112 ttgaactgcttgcctatcgccaatattgagcatttcagagctgagaagcttggccatgct 1171 Query: 363 gatgttgtcgaggaagtgtctgccggagatggcaagattgtcaagatcactggcatcagg 422 ||| |||| ||||| | || |||||||| |||||| | ||||||||||| |||| | Sbjct: 1172 gatcttgttgaggaggcctcccttggagatggaaagattttgaagatcactggtatcaag 1231 Query: 423 gacatggggaggactgcaactgtgcttgtccgtgggtccaaccagttggttattgatgaa 482 ||||||||||| ||| || |||| || || ||||| ||||||||| | ||| | |||||| Sbjct: 1232 gacatggggagaactacatctgttctagttcgtggctccaaccagcttgttctagatgaa 1291 Query: 483 gctga 487 ||||| Sbjct: 1292 gctga 1296 Score = 44.1 bits (22), Expect = 0.58 Identities = 43/50 (86%) Strand = Plus / Plus Query: 24 gctgtcatccagtttcagatctcgccgcccaagactgatattgagcagag 73 ||||| || ||||| |||||||| || || ||||||||||| |||||||| Sbjct: 833 gctgtgattcagttccagatctcacctcctaagactgatatcgagcagag 882
>dbj|AB020749.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MRC8 Length = 76816 Score = 89.7 bits (45), Expect = 1e-14 Identities = 195/245 (79%) Strand = Plus / Plus Query: 243 gctaagattctggtggtcaaggatgtggagagggacgagattgagttcatcaccaagact 302 ||||||||| |||| | |||||||| ||||| || |||||||| || |||||||||| Sbjct: 62175 gctaagattatggttattaaggatgttgagagagatgagattgaatttgtcaccaagaca 62234 Query: 303 ctcaactgcctgccaattgccaacattgagcatttccgtgaggataaacttgggtatgct 362 | |||||| |||| || ||||| |||||||||||| | | || || ||||| ||||| Sbjct: 62235 ttgaactgcttgcctatcgccaatattgagcatttcagagctgagaagcttggccatgct 62294 Query: 363 gatgttgtcgaggaagtgtctgccggagatggcaagattgtcaagatcactggcatcagg 422 ||| |||| ||||| | || |||||||| |||||| | ||||||||||| |||| | Sbjct: 62295 gatcttgttgaggaggcctcccttggagatggaaagattttgaagatcactggtatcaag 62354 Query: 423 gacatggggaggactgcaactgtgcttgtccgtgggtccaaccagttggttattgatgaa 482 ||||||||||| ||| || |||| || || ||||| ||||||||| | ||| | |||||| Sbjct: 62355 gacatggggagaactacatctgttctagttcgtggctccaaccagcttgttctagatgaa 62414 Query: 483 gctga 487 ||||| Sbjct: 62415 gctga 62419 Score = 44.1 bits (22), Expect = 0.58 Identities = 43/50 (86%) Strand = Plus / Plus Query: 24 gctgtcatccagtttcagatctcgccgcccaagactgatattgagcagag 73 ||||| || ||||| |||||||| || || ||||||||||| |||||||| Sbjct: 61956 gctgtgattcagttccagatctcacctcctaagactgatatcgagcagag 62005
>gb|DQ016992.1| Ipomoea batatas putative cytosolic chaperonin delta subunit mRNA, partial cds Length = 680 Score = 71.9 bits (36), Expect = 3e-09 Identities = 78/92 (84%) Strand = Plus / Plus Query: 396 aagattgtcaagatcactggcatcagggacatggggaggactgcaactgtgcttgtccgt 455 |||||||| ||||| ||||| || ||| ||||| || |||||| ||||||| || || Sbjct: 8 aagattgtgaagattactggaattcaggatatgggtagaactgcatctgtgctggttcga 67 Query: 456 gggtccaaccagttggttattgatgaagctga 487 |||||||| ||||||||||||||||||||||| Sbjct: 68 gggtccaatcagttggttattgatgaagctga 99
>gb|AY389704.1| Hyacinthus orientalis chaperonin TCP-1/cpn60 mRNA, partial cds Length = 829 Score = 69.9 bits (35), Expect = 1e-08 Identities = 47/51 (92%) Strand = Plus / Plus Query: 24 gctgtcatccagtttcagatctcgccgcccaagactgatattgagcagagc 74 |||||||||||||| ||||||||||| |||||||| || |||||||||||| Sbjct: 699 gctgtcatccagttccagatctcgcctcccaagaccgacattgagcagagc 749
>gb|DQ206590.1| Aphrocallistes vastus isolate TOA56 chaperonin complex component TCP-1 delta subunit mRNA, partial cds Length = 1038 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 95 gcagatggaccgcatcctccgcgaggagcgcaattacatcct 136 |||||||||||||||||| |||||||||||| |||||||| Sbjct: 636 gcagatggaccgcatcctggacgaggagcgcaactacatcct 677
>emb|BX883049.1| Rattus norvegicus chromosome 20, major histocompatibility complex, assembled from 40 BACs, strain Brown Norway (BN/ssNHsd), RT1n haplotype; segment 8/11 Length = 349476 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Minus Query: 23 cgctgtcatccagtttcagatc 44 |||||||||||||||||||||| Sbjct: 112384 cgctgtcatccagtttcagatc 112363 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 24 gctgtcatccagtttcagatc 44 ||||||||||||||||||||| Sbjct: 327942 gctgtcatccagtttcagatc 327962 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 24 gctgtcatccagtttcagatc 44 ||||||||||||||||||||| Sbjct: 209221 gctgtcatccagtttcagatc 209241
>emb|BX883050.1| Rattus norvegicus chromosome 20, major histocompatibility complex, assembled from 40 BACs, strain Brown Norway (BN/ssNHsd), RT1n haplotype; segment 9/11 Length = 348879 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Minus Query: 23 cgctgtcatccagtttcagatc 44 |||||||||||||||||||||| Sbjct: 242884 cgctgtcatccagtttcagatc 242863 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 24 gctgtcatccagtttcagatc 44 ||||||||||||||||||||| Sbjct: 195082 gctgtcatccagtttcagatc 195102 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 24 gctgtcatccagtttcagatc 44 ||||||||||||||||||||| Sbjct: 178228 gctgtcatccagtttcagatc 178248 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 24 gctgtcatccagtttcagatc 44 ||||||||||||||||||||| Sbjct: 169700 gctgtcatccagtttcagatc 169680 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 24 gctgtcatccagtttcagatc 44 ||||||||||||||||||||| Sbjct: 126575 gctgtcatccagtttcagatc 126555 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 24 gctgtcatccagtttcagatc 44 ||||||||||||||||||||| Sbjct: 79285 gctgtcatccagtttcagatc 79305 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 24 gctgtcatccagtttcagatc 44 ||||||||||||||||||||| Sbjct: 43472 gctgtcatccagtttcagatc 43492
>gb|AC137842.8| Mus musculus chromosome 15, clone RP23-91M6, complete sequence Length = 230609 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 494 tctccatgatgccctttgtgtcatc 518 ||||||||||||||| ||||||||| Sbjct: 139917 tctccatgatgccctgtgtgtcatc 139941
>gb|BT019208.1| Zea mays clone Contig881.F mRNA sequence Length = 1196 Score = 42.1 bits (21), Expect = 2.3 Identities = 30/33 (90%) Strand = Plus / Plus Query: 474 attgatgaagctgaccgcagtctccatgatgcc 506 ||||| |||||||| || ||||||||||||||| Sbjct: 347 attgaggaagctgaacgaagtctccatgatgcc 379
>gb|BT018658.1| Zea mays clone EL01N0508E09.d mRNA sequence Length = 1864 Score = 42.1 bits (21), Expect = 2.3 Identities = 30/33 (90%) Strand = Plus / Plus Query: 474 attgatgaagctgaccgcagtctccatgatgcc 506 ||||| |||||||| || ||||||||||||||| Sbjct: 1032 attgaggaagctgaacgaagtctccatgatgcc 1064
>gb|AC115060.9| Mus musculus chromosome 1, clone RP24-395F2, complete sequence Length = 172482 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 596 ttggtcaaaggagctccatgg 616 ||||||||||||||||||||| Sbjct: 129689 ttggtcaaaggagctccatgg 129669
>gb|AY973260.1| Leishmania major ribosomal protein L3 mRNA, complete cds Length = 1260 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 101 ggaccgcatcctccgcgaggagcgc 125 ||||||||||| ||||||||||||| Sbjct: 1176 ggaccgcatccgccgcgaggagcgc 1200
>ref|NM_007637.1| Mus musculus chaperonin subunit 5 (epsilon) (Cct5), mRNA Length = 1769 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 494 tctccatgatgccctttgtgtcatc 518 ||||||||||||||| ||||||||| Sbjct: 1302 tctccatgatgccctgtgtgtcatc 1326
>gb|AC165946.4| Mus musculus chromosome 1, clone RP24-167M10, complete sequence Length = 157434 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 596 ttggtcaaaggagctccatgg 616 ||||||||||||||||||||| Sbjct: 55223 ttggtcaaaggagctccatgg 55243
>emb|Z31555.1|MMCCTEP M.musculus (129/Sv) Ccte mRNA for CCT (chaperonin containing TCP-1) epsilon subunit Length = 1769 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 494 tctccatgatgccctttgtgtcatc 518 ||||||||||||||| ||||||||| Sbjct: 1302 tctccatgatgccctgtgtgtcatc 1326
>gb|BC079441.1| Rattus norvegicus chaperonin subunit 5 (epsilon), mRNA (cDNA clone MGC:94989 IMAGE:7115414), complete cds Length = 1766 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 494 tctccatgatgccctttgtgtcatc 518 ||||||||||||||| ||||||||| Sbjct: 1205 tctccatgatgccctgtgtgtcatc 1229
>gb|AC183298.3| Pan troglodytes BAC clone CH251-330I21 from chromosome 17, complete sequence Length = 174313 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 253 tggtggtcaaggatgtggagaggga 277 |||||||||||||||||||| |||| Sbjct: 162203 tggtggtcaaggatgtggaggggga 162179
>emb|BX001009.12| Mouse DNA sequence from clone RP23-312H11 on chromosome 11 Contains a novel pseudogene, complete sequence Length = 143741 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 253 tggtggtcaaggatgtggaga 273 ||||||||||||||||||||| Sbjct: 52705 tggtggtcaaggatgtggaga 52725
>ref|NM_001004078.1| Rattus norvegicus chaperonin subunit 5 (epsilon) (Cct5), mRNA Length = 1766 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 494 tctccatgatgccctttgtgtcatc 518 ||||||||||||||| ||||||||| Sbjct: 1205 tctccatgatgccctgtgtgtcatc 1229
>gb|AC069363.10| Homo sapiens chromosome 17, clone RP11-104J23, complete sequence Length = 154828 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 253 tggtggtcaaggatgtggagaggga 277 |||||||||||||||||||| |||| Sbjct: 16179 tggtggtcaaggatgtggaggggga 16155
>dbj|AK145445.1| Mus musculus 5 days embryo whole body cDNA, RIKEN full-length enriched library, clone:I0C0046D15 product:chaperonin subunit 5 (epsilon), full insert sequence Length = 1807 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 494 tctccatgatgccctttgtgtcatc 518 ||||||||||||||| ||||||||| Sbjct: 1271 tctccatgatgccctgtgtgtcatc 1295
>dbj|AK146425.1| Mus musculus CRL-1722 L5178Y-R cDNA, RIKEN full-length enriched library, clone:I730086P06 product:chaperonin subunit 5 (epsilon), full insert sequence Length = 1721 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 494 tctccatgatgccctttgtgtcatc 518 ||||||||||||||| ||||||||| Sbjct: 1254 tctccatgatgccctgtgtgtcatc 1278
>dbj|AK146405.1| Mus musculus TIB-55 BB88 cDNA, RIKEN full-length enriched library, clone:I730074J22 product:chaperonin subunit 5 (epsilon), full insert sequence Length = 1747 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 494 tctccatgatgccctttgtgtcatc 518 ||||||||||||||| ||||||||| Sbjct: 1274 tctccatgatgccctgtgtgtcatc 1298
>dbj|AK136493.1| Mus musculus adult male colon cDNA, RIKEN full-length enriched library, clone:9030625O15 product:chaperonin subunit 5 (epsilon), full insert sequence Length = 1800 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 494 tctccatgatgccctttgtgtcatc 518 ||||||||||||||| ||||||||| Sbjct: 1254 tctccatgatgccctgtgtgtcatc 1278
>dbj|AK133857.1| Mus musculus 8 days embryo whole body cDNA, RIKEN full-length enriched library, clone:5730455A01 product:chaperonin subunit 5 (epsilon), full insert sequence Length = 1707 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 494 tctccatgatgccctttgtgtcatc 518 ||||||||||||||| ||||||||| Sbjct: 1260 tctccatgatgccctgtgtgtcatc 1284
>dbj|AK153911.1| Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN full-length enriched library, clone:E430004M12 product:chaperonin subunit 5 (epsilon), full insert sequence Length = 1722 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 494 tctccatgatgccctttgtgtcatc 518 ||||||||||||||| ||||||||| Sbjct: 1278 tctccatgatgccctgtgtgtcatc 1302
>dbj|AK150390.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830006H03 product:chaperonin subunit 5 (epsilon), full insert sequence Length = 1690 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 494 tctccatgatgccctttgtgtcatc 518 ||||||||||||||| ||||||||| Sbjct: 1221 tctccatgatgccctgtgtgtcatc 1245
>dbj|AK167895.1| Mus musculus TIB-55 BB88 cDNA, RIKEN full-length enriched library, clone:I730035K07 product:chaperonin subunit 5 (epsilon), full insert sequence Length = 1711 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 494 tctccatgatgccctttgtgtcatc 518 ||||||||||||||| ||||||||| Sbjct: 1243 tctccatgatgccctgtgtgtcatc 1267
>dbj|AK077753.1| Mus musculus 8 days embryo whole body cDNA, RIKEN full-length enriched library, clone:5730596N21 product:chaperonin subunit 5 (epsilon), full insert sequence Length = 1797 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 494 tctccatgatgccctttgtgtcatc 518 ||||||||||||||| ||||||||| Sbjct: 1261 tctccatgatgccctgtgtgtcatc 1285
>dbj|AK088184.1| Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN full-length enriched library, clone:E430005M01 product:chaperonin subunit 5 (epsilon), full insert sequence Length = 1704 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 494 tctccatgatgccctttgtgtcatc 518 ||||||||||||||| ||||||||| Sbjct: 1236 tctccatgatgccctgtgtgtcatc 1260
>gb|BC094427.1| Mus musculus chaperonin subunit 5 (epsilon), mRNA (cDNA clone MGC:122961 IMAGE:30537966), complete cds Length = 1750 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 494 tctccatgatgccctttgtgtcatc 518 ||||||||||||||| ||||||||| Sbjct: 1249 tctccatgatgccctgtgtgtcatc 1273
>gb|AC023913.7|AC023913 Arabidopsis thaliana chromosome 1 BAC F7P12 genomic sequence, complete sequence Length = 82214 Score = 42.1 bits (21), Expect = 2.3 Identities = 33/37 (89%) Strand = Plus / Plus Query: 238 caaaggctaagattctggtggtcaaggatgtggagag 274 |||| ||| ||||| |||||||||||||||| ||||| Sbjct: 6518 caaaagctcagattatggtggtcaaggatgtagagag 6554
>gb|AC079762.7| Homo sapiens BAC clone RP11-150F12 from 2, complete sequence Length = 163408 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 560 tgctcctgaaatagaaatgtc 580 ||||||||||||||||||||| Sbjct: 38622 tgctcctgaaatagaaatgtc 38602
>gb|AC139881.1| Leishmania major strain Friedlin chromosome 32 clone L1340b, complete sequence Length = 25820 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 101 ggaccgcatcctccgcgaggagcgc 125 ||||||||||| ||||||||||||| Sbjct: 1109 ggaccgcatccgccgcgaggagcgc 1085
>gb|AC023279.2|AC023279 Genomic sequence for Arabidopsis thaliana BAC F12K21 from chromosome I, complete sequence Length = 117585 Score = 42.1 bits (21), Expect = 2.3 Identities = 33/37 (89%) Strand = Plus / Plus Query: 238 caaaggctaagattctggtggtcaaggatgtggagag 274 |||| ||| ||||| |||||||||||||||| ||||| Sbjct: 91237 caaaagctcagattatggtggtcaaggatgtagagag 91273
>dbj|AK129056.1| Mus musculus mRNA for mKIAA0098 protein Length = 1682 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 494 tctccatgatgccctttgtgtcatc 518 ||||||||||||||| ||||||||| Sbjct: 1208 tctccatgatgccctgtgtgtcatc 1232
>gb|AY107750.1| Zea mays PCO107612 mRNA sequence Length = 1158 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 100 tggaccgcatcctccgcgagg 120 ||||||||||||||||||||| Sbjct: 541 tggaccgcatcctccgcgagg 561
>gb|AY104342.1| Zea mays PCO097811 mRNA sequence Length = 2116 Score = 42.1 bits (21), Expect = 2.3 Identities = 30/33 (90%) Strand = Plus / Plus Query: 474 attgatgaagctgaccgcagtctccatgatgcc 506 ||||| |||||||| || ||||||||||||||| Sbjct: 1297 attgaggaagctgaacgaagtctccatgatgcc 1329
>gb|AY105086.1| Zea mays PCO107611 mRNA sequence Length = 615 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 100 tggaccgcatcctccgcgagg 120 ||||||||||||||||||||| Sbjct: 2 tggaccgcatcctccgcgagg 22
>gb|DQ206616.1| Monosiga brevicollis isolate TOA56 chaperonin complex component TCP-1 delta subunit mRNA, partial cds Length = 923 Score = 42.1 bits (21), Expect = 2.3 Identities = 36/41 (87%) Strand = Plus / Plus Query: 96 cagatggaccgcatcctccgcgaggagcgcaattacatcct 136 |||||||||||| ||||| ||||||||||| |||||||| Sbjct: 541 cagatggaccgcgtcctcaaggaggagcgcaagtacatcct 581
>gb|BC092233.1| Mus musculus cDNA clone IMAGE:30551864, containing frame-shift errors Length = 1761 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 494 tctccatgatgccctttgtgtcatc 518 ||||||||||||||| ||||||||| Sbjct: 1272 tctccatgatgccctgtgtgtcatc 1296
>gb|AC003976.1|AC003976 Homo sapiens chromosome 17, clone hCIT.91_J_4, complete sequence Length = 123925 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 253 tggtggtcaaggatgtggagaggga 277 |||||||||||||||||||| |||| Sbjct: 42255 tggtggtcaaggatgtggaggggga 42279
>gb|AC124587.5| Mus musculus BAC clone RP23-132G24 from 1, complete sequence Length = 220046 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 526 tggtgaacaagaggtttctaa 546 ||||||||||||||||||||| Sbjct: 188948 tggtgaacaagaggtttctaa 188968
>gb|AC102776.10| Mus musculus chromosome 1, clone RP23-469D21, complete sequence Length = 190746 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 526 tggtgaacaagaggtttctaa 546 ||||||||||||||||||||| Sbjct: 115991 tggtgaacaagaggtttctaa 115971
>dbj|AB022158.1| Mus musculus Ccte gene for chaperonin containing TCP-1 epsilon subunit, complete cds Length = 14641 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 494 tctccatgatgccctttgtgtcatc 518 ||||||||||||||| ||||||||| Sbjct: 11207 tctccatgatgccctgtgtgtcatc 11231
>ref|NM_001031520.1| Gallus gallus tubulin-specific chaperone c (TBCC), mRNA Length = 2523 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 184 tccagaagagcatcttgcgt 203 |||||||||||||||||||| Sbjct: 2000 tccagaagagcatcttgcgt 2019
>gb|AC108394.13| Mus musculus chromosome 1, clone RP24-322K23, complete sequence Length = 206294 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 614 tgggatggagagttactgca 633 |||||||||||||||||||| Sbjct: 10152 tgggatggagagttactgca 10171
>ref|XM_715377.1| Candida albicans SC5314 putative cytosolic chaperonin CCT ring complex subunit Cct4 (CaO19_2720), mRNA Length = 1635 Score = 40.1 bits (20), Expect = 9.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 544 taattgctggtggcggtgctcctgaaat 571 ||||||||||||| |||||||| ||||| Sbjct: 1277 taattgctggtggtggtgctccagaaat 1304
>ref|XM_715147.1| Candida albicans SC5314 putative cytosolic chaperonin CCT ring complex subunit Cct4 (CaO19_10235), mRNA Length = 1635 Score = 40.1 bits (20), Expect = 9.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 544 taattgctggtggcggtgctcctgaaat 571 ||||||||||||| |||||||| ||||| Sbjct: 1277 taattgctggtggtggtgctccagaaat 1304
>ref|XM_798178.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053507763.20) partial mRNA Length = 561 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 548 tgctggtggcggtgctcctg 567 |||||||||||||||||||| Sbjct: 77 tgctggtggcggtgctcctg 96
>ref|XM_449931.1| Candida glabrata CBS138 hypothetical protein (CAGL0M13519g) partial mRNA Length = 1485 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 468 ttggttattgatgaagctga 487 |||||||||||||||||||| Sbjct: 538 ttggttattgatgaagctga 557
>emb|CR376731.13| Zebrafish DNA sequence from clone DKEY-117K10 in linkage group 8, complete sequence Length = 130762 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 188 gaagagcatcttgcgtgatgcggt 211 ||||||||||||||||| |||||| Sbjct: 4334 gaagagcatcttgcgtgttgcggt 4311
>emb|CR380959.1| Candida glabrata strain CBS138 chromosome M complete sequence Length = 1400893 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 468 ttggttattgatgaagctga 487 |||||||||||||||||||| Sbjct: 1330199 ttggttattgatgaagctga 1330180
>emb|AL627263.6| Zebrafish DNA sequence from clone RP71-1L9 in linkage group 14 Contains part of a novel gene similar to ATP8B1 (ATPase, Class I, type 8B, member 1), part of a novel gene similar to MCF2 (MCF.2 cell line derived transforming sequence) and two CpG islands, complete sequence Length = 174521 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 638 ggagtttgctgatgcacttg 657 |||||||||||||||||||| Sbjct: 130013 ggagtttgctgatgcacttg 130032
>emb|AJ851603.1| Gallus gallus mRNA for hypothetical protein, clone 10n19 Length = 2523 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 184 tccagaagagcatcttgcgt 203 |||||||||||||||||||| Sbjct: 2000 tccagaagagcatcttgcgt 2019
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 40.1 bits (20), Expect = 9.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 100 tggaccgcatcctccgcgaggagcgcaattac 131 |||||||||| ||| |||| |||||||||||| Sbjct: 6573116 tggaccgcattctcggcgacgagcgcaattac 6573147
>gb|AC093808.2| Homo sapiens BAC clone RP11-342A1 from 4, complete sequence Length = 210837 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 279 gagattgagttcatcaccaa 298 |||||||||||||||||||| Sbjct: 200868 gagattgagttcatcaccaa 200887
>gb|AC160395.2| Mus musculus BAC clone RP23-36C19 from chromosome 12, complete sequence Length = 207840 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 614 tgggatggagagttactgca 633 |||||||||||||||||||| Sbjct: 151039 tgggatggagagttactgca 151020
>gb|AC091700.4| Homo sapiens chromosome 15 clone CTD-2173F13 map 15q22, complete sequence Length = 97653 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 468 ttggttattgatgaagctga 487 |||||||||||||||||||| Sbjct: 56446 ttggttattgatgaagctga 56427
>gb|AC092079.2| Homo sapiens chromosome 15 clone RP11-568G20 map 15q22, complete sequence Length = 195554 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 468 ttggttattgatgaagctga 487 |||||||||||||||||||| Sbjct: 171724 ttggttattgatgaagctga 171705
>gb|AC155827.10| Mus musculus 10 BAC RP24-408N5 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 149754 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 517 tcaggtgcttggtgaacaag 536 |||||||||||||||||||| Sbjct: 119981 tcaggtgcttggtgaacaag 120000
>ref|NM_171985.2| Caenorhabditis elegans T21B10.7 (T21B10.7) mRNA, complete cds Length = 1932 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 495 ctccatgatgccctttgtgt 514 |||||||||||||||||||| Sbjct: 1160 ctccatgatgccctttgtgt 1179
>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome Length = 3304561 Score = 40.1 bits (20), Expect = 9.0 Identities = 29/32 (90%) Strand = Plus / Minus Query: 100 tggaccgcatcctccgcgaggagcgcaattac 131 |||| ||||||||| |||| |||||||||||| Sbjct: 798323 tggatcgcatcctcggcgatgagcgcaattac 798292
>emb|BX890619.6| Zebrafish DNA sequence from clone CH211-288M1, complete sequence Length = 141754 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 638 ggagtttgctgatgcacttg 657 |||||||||||||||||||| Sbjct: 141669 ggagtttgctgatgcacttg 141688
>gb|AC097465.2| Homo sapiens BAC clone RP11-24I21 from 4, complete sequence Length = 172557 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 279 gagattgagttcatcaccaa 298 |||||||||||||||||||| Sbjct: 97609 gagattgagttcatcaccaa 97628
>emb|BX004988.5| Zebrafish DNA sequence from clone CH211-79C4 in linkage group 14, complete sequence Length = 166194 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 638 ggagtttgctgatgcacttg 657 |||||||||||||||||||| Sbjct: 126690 ggagtttgctgatgcacttg 126671
>gb|AC156274.8| Mus musculus 10 BAC RP24-286P15 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 177364 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 614 tgggatggagagttactgca 633 |||||||||||||||||||| Sbjct: 158943 tgggatggagagttactgca 158962
>gb|AC073257.6| Homo sapiens BAC clone RP11-213H22 from 2, complete sequence Length = 120488 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 148 agaagatcaaggcgtctgga 167 |||||||||||||||||||| Sbjct: 98568 agaagatcaaggcgtctgga 98549
>emb|BX119967.5| Mouse DNA sequence from clone RP23-362M13 on chromosome X, complete sequence Length = 59836 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 614 tgggatggagagttactgca 633 |||||||||||||||||||| Sbjct: 31786 tgggatggagagttactgca 31767
>emb|BX276118.7| Mouse DNA sequence from clone RP23-452O23 on chromosome X, complete sequence Length = 119329 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 614 tgggatggagagttactgca 633 |||||||||||||||||||| Sbjct: 25045 tgggatggagagttactgca 25026
>gb|AC145087.14| Mus musculus chromosome 1, clone RP23-255P18, complete sequence Length = 187470 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 614 tgggatggagagttactgca 633 |||||||||||||||||||| Sbjct: 171968 tgggatggagagttactgca 171987
>gb|AF210843.1|AF210843 Sorangium cellulosum strain So ce90 epothilone biosynthesis gene cluster, complete sequence Length = 68750 Score = 40.1 bits (20), Expect = 9.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 93 gcgcagatggaccgcatcctccgcgagg 120 ||||||||||| || ||||||||||||| Sbjct: 42515 gcgcagatggagcggatcctccgcgagg 42542
>emb|Z68318.2|CET21B10 Caenorhabditis elegans Cosmid T21B10, complete sequence Length = 31801 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 495 ctccatgatgccctttgtgt 514 |||||||||||||||||||| Sbjct: 411 ctccatgatgccctttgtgt 430
>gb|AC102608.14| Mus musculus chromosome 3, clone RP23-402L6, complete sequence Length = 185014 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 496 tccatgatgccctttgtgtc 515 |||||||||||||||||||| Sbjct: 32664 tccatgatgccctttgtgtc 32683
>gb|DQ206485.1| Platynereis dumerilii isolate TOA56 chaperonin complex component TCP-1 delta subunit mRNA, partial cds Length = 878 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 270 gagagggacgagattgagttcatc 293 |||||||| ||||||||||||||| Sbjct: 802 gagagggaggagattgagttcatc 825 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 168 tgcaacgtcctcctcatccagaag 191 |||||||| ||||||||||||||| Sbjct: 700 tgcaacgttctcctcatccagaag 723
>emb|CT032276.1| Platynereis dumerilii EST IB0AAA41DC01EM1 Length = 939 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 270 gagagggacgagattgagttcatc 293 |||||||| ||||||||||||||| Sbjct: 440 gagagggaggagattgagttcatc 463 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 168 tgcaacgtcctcctcatccagaag 191 |||||||| ||||||||||||||| Sbjct: 338 tgcaacgttctcctcatccagaag 361
>gb|U25632.1|CEU25632 Caenorhabditis elegans chaperonin CCT-2 (cct-2) mRNA, complete cds Length = 1590 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 495 ctccatgatgccctttgtgt 514 |||||||||||||||||||| Sbjct: 1150 ctccatgatgccctttgtgt 1169
>gb|AC153547.3| Mus musculus 10 BAC RP23-429B12 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 206024 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 614 tgggatggagagttactgca 633 |||||||||||||||||||| Sbjct: 187859 tgggatggagagttactgca 187840
>gb|L25053.1|RATGNRHR Rattus norvegicus Gonadotropin releasing hormone receptor (GnRH-R) mRNA, complete cds Length = 2938 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 64 ttgagcagagcgtcatcgtg 83 |||||||||||||||||||| Sbjct: 167 ttgagcagagcgtcatcgtg 186 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,922,079 Number of Sequences: 3902068 Number of extensions: 4922079 Number of successful extensions: 101969 Number of sequences better than 10.0: 97 Number of HSP's better than 10.0 without gapping: 97 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 101605 Number of HSP's gapped (non-prelim): 357 length of query: 658 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 635 effective length of database: 17,143,297,704 effective search space: 10885994042040 effective search space used: 10885994042040 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
