| Clone Name | bags18j21 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT009568.1| Triticum aestivum clone wre1n.pk0015.d2:fis, full insert mRNA sequence Length = 1165 Score = 668 bits (337), Expect = 0.0 Identities = 447/481 (92%), Gaps = 2/481 (0%) Strand = Plus / Plus Query: 10 aagggaataagaagtgggcatgtgcccgggnagcaaatgcgttccttttcctcaggtgct 69 |||||||||||||| ||||||||||| ||| ||||||||||||||||||||||||||||| Sbjct: 638 aagggaataagaagcgggcatgtgcctggg-agcaaatgcgttccttttcctcaggtgct 696 Query: 70 tgacagtacacaaaagctattacctgcagatgagctccgtaagcgatttgagcaagaagg 129 |||||||||||| |||||||| |||||||||||||||||||||||||| ||||||||||| Sbjct: 697 tgacagtacacagaagctattgcctgcagatgagctccgtaagcgattcgagcaagaagg 756 Query: 130 tatatcacttgatcaacccattgtgacctcttgcggcactggtgtgacagcatgtgtatt 189 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 757 tatatcacttgatcaacccattgtgacctcttgcggcactggtgtgacagcatgtgtatt 816 Query: 190 agctttgggccttcatcgcctcggcaaaactgatgttgccgtgtacgatggatcatggac 249 ||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||| | Sbjct: 817 agctttgggccttcaccgcctcggcaaaactgatgtttccgtgtacgatggatcatggcc 876 Query: 250 cgaatggggtgctcaccccgacactccagttgctactgctgtttagtctcatacgacgtg 309 ||| |||||||||||||||||||||||||||| ||||||||||||||| || || ||| Sbjct: 877 cgagtggggtgctcaccccgacactccagttggtactgctgtttagtcccacgcgcagtg 936 Query: 310 tatggaggaccatcttttgtgccccaacttgtcggcgatgtatgaaggtcacaaggcaaa 369 |||||||| || |||||||| |||| |||| | ||||||||||| ||||| |||||||| Sbjct: 937 tatggaggcccgtcttttgtacccccacttcccagcgatgtatgatggtcagaaggcaaa 996 Query: 370 ggaaactgaagagtatgggtgggtgtaaggttgtggaagcgaatgctgttgggcgttttc 429 |||||||||||||| |||||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 997 ggaaactgaagagtgtgggtgggtgtaaggttgtggaagcg-atgctgttcggcgttttc 1055 Query: 430 aatgtaaattatcgaaacagaggaaaatggaacatacactgtgtgaatcaatagttgatg 489 |||||||||||||||||||||| || || ||| | | ||||||||||||||||||||||| Sbjct: 1056 aatgtaaattatcgaaacagagaaagattgaatacatactgtgtgaatcaatagttgatg 1115 Query: 490 a 490 | Sbjct: 1116 a 1116
>gb|BT009614.1| Triticum aestivum clone wre1n.pk0107.d7:fis, full insert mRNA sequence Length = 1118 Score = 416 bits (210), Expect = e-113 Identities = 271/290 (93%), Gaps = 1/290 (0%) Strand = Plus / Plus Query: 10 aagggaataagaagtgggcatgtgcccgggnagcaaatgcgttccttttcctcaggtgct 69 |||||||||||||| ||||||||||| ||| ||||||||||||||||||||||||||||| Sbjct: 582 aagggaataagaagcgggcatgtgcctggg-agcaaatgcgttccttttcctcaggtgct 640 Query: 70 tgacagtacacaaaagctattacctgcagatgagctccgtaagcgatttgagcaagaagg 129 ||||||| |||| |||||||| ||||||||||| ||| |||||||||| ||||||||||| Sbjct: 641 tgacagttcacagaagctattgcctgcagatgatctctgtaagcgattcgagcaagaagg 700 Query: 130 tatatcacttgatcaacccattgtgacctcttgcggcactggtgtgacagcatgtgtatt 189 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 701 tatatcacttgatcaacccattgtgacctcttgcggcactggtgtgacagcatgtgttct 760 Query: 190 agctttgggccttcatcgcctcggcaaaactgatgttgccgtgtacgatggatcatggac 249 ||||||||| ||||||||||||||||||||||||||||| || || |||||||||||||| Sbjct: 761 agctttgggtcttcatcgcctcggcaaaactgatgttgctgtatatgatggatcatggac 820 Query: 250 cgaatggggtgctcaccccgacactccagttgctactgctgtttagtctc 299 |||||||| |||||||| ||||||||||||||||| ||||||||||||| Sbjct: 821 tgaatggggcgctcaccctgacactccagttgctaccgctgtttagtctc 870 Score = 145 bits (73), Expect = 2e-31 Identities = 122/136 (89%), Gaps = 3/136 (2%) Strand = Plus / Plus Query: 348 tgtatgaaggtcacaaggcaaaggaaactgaagagtatgggtgggtgtaaggttgtggaa 407 ||||| ||||||| ||||||||||| |||||||||| ||||||||||||||||||||||| Sbjct: 916 tgtattaaggtcagaaggcaaaggagactgaagagtttgggtgggtgtaaggttgtggaa 975 Query: 408 gcgaatgctgttgggcgttttcaatgtaaattatcgaaacagaggaaaatgga--acata 465 ||| | |||||| |||||||||| |||||||||||||||||||| ||| |||| | ||| Sbjct: 976 gcg-acgctgttcggcgttttcattgtaaattatcgaaacagagaaaattggaatatata 1034 Query: 466 cactgtgtgaatcaat 481 |||| ||||||||||| Sbjct: 1035 cactatgtgaatcaat 1050
>gb|BT017081.1| Zea mays clone EL01N0360D03.c mRNA sequence Length = 1426 Score = 289 bits (146), Expect = 5e-75 Identities = 255/290 (87%), Gaps = 1/290 (0%) Strand = Plus / Plus Query: 10 aagggaataagaagtgggcatgtgcccgggnagcaaatgcgttccttttcctcaggtgct 69 ||||| || ||||||||||||||||| ||| |||||||| ||||| ||||||||||| || Sbjct: 988 aaggggattagaagtgggcatgtgcctggg-agcaaatgtgttccgtttcctcaggttct 1046 Query: 70 tgacagtacacaaaagctattacctgcagatgagctccgtaagcgatttgagcaagaagg 129 |||||| ||||||||||||| ||| |||||||||||||||| || |||||||||||||| Sbjct: 1047 tgacagctcacaaaagctattgccttcagatgagctccgtaaacggtttgagcaagaagg 1106 Query: 130 tatatcacttgatcaacccattgtgacctcttgcggcactggtgtgacagcatgtgtatt 189 |||||||||||||| || |||| |||||||| |||||||||||||||||||||||||| Sbjct: 1107 aatatcacttgatcagcctcttgttacctcttgtggcactggtgtgacagcatgtgtatt 1166 Query: 190 agctttgggccttcatcgcctcggcaaaactgatgttgccgtgtacgatggatcatggac 249 ||| |||||||||||||| || |||||||| ||||| || | || || ||||| ||||| Sbjct: 1167 agccttgggccttcatcgacttggcaaaaccgatgtcgcaatttatgacggatcgtggac 1226 Query: 250 cgaatggggtgctcaccccgacactccagttgctactgctgtttagtctc 299 ||||||||| || || || |||||||||||||| |||||||||||||||| Sbjct: 1227 cgaatggggcgcccatcctgacactccagttgcaactgctgtttagtctc 1276
>gb|AY105714.1| Zea mays PCO128327 mRNA sequence Length = 1362 Score = 289 bits (146), Expect = 5e-75 Identities = 255/290 (87%), Gaps = 1/290 (0%) Strand = Plus / Plus Query: 10 aagggaataagaagtgggcatgtgcccgggnagcaaatgcgttccttttcctcaggtgct 69 ||||| || ||||||||||||||||| ||| |||||||| ||||| ||||||||||| || Sbjct: 860 aaggggattagaagtgggcatgtgcctggg-agcaaatgtgttccgtttcctcaggttct 918 Query: 70 tgacagtacacaaaagctattacctgcagatgagctccgtaagcgatttgagcaagaagg 129 |||||| ||||||||||||| ||| |||||||||||||||| || |||||||||||||| Sbjct: 919 tgacagctcacaaaagctattgccttcagatgagctccgtaaacggtttgagcaagaagg 978 Query: 130 tatatcacttgatcaacccattgtgacctcttgcggcactggtgtgacagcatgtgtatt 189 |||||||||||||| || |||| |||||||| |||||||||||||||||||||||||| Sbjct: 979 aatatcacttgatcagcctcttgttacctcttgtggcactggtgtgacagcatgtgtatt 1038 Query: 190 agctttgggccttcatcgcctcggcaaaactgatgttgccgtgtacgatggatcatggac 249 ||| |||||||||||||| || |||||||| ||||| || | || || ||||| ||||| Sbjct: 1039 agccttgggccttcatcgacttggcaaaaccgatgtcgcaatttatgacggatcgtggac 1098 Query: 250 cgaatggggtgctcaccccgacactccagttgctactgctgtttagtctc 299 ||||||||| || || || |||||||||||||| |||||||||||||||| Sbjct: 1099 cgaatggggcgcccatcctgacactccagttgcaactgctgtttagtctc 1148
>dbj|AK059102.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-022-D02, full insert sequence Length = 1212 Score = 266 bits (134), Expect = 8e-68 Identities = 243/278 (87%), Gaps = 1/278 (0%) Strand = Plus / Plus Query: 13 ggaataagaagtgggcatgtgcccgggnagcaaatgcgttccttttcctcaggtgcttga 72 ||||||||||||||||||||||| ||| |||||||| |||||||| |||||| ||||||| Sbjct: 663 ggaataagaagtgggcatgtgcctggg-agcaaatgtgttcctttccctcagttgcttga 721 Query: 73 cagtacacaaaagctattacctgcagatgagctccgtaagcgatttgagcaagaaggtat 132 |||| | ||||||||||||||| |||| ||||||||||| |||||||| ||||||||||| Sbjct: 722 cagttcgcaaaagctattacctccagaagagctccgtaaacgatttgaacaagaaggtat 781 Query: 133 atcacttgatcaacccattgtgacctcttgcggcactggtgtgacagcatgtgtattagc 192 ||| |||||||||||| | ||| |||| || || |||||||||||||||||| ||||||| Sbjct: 782 atcgcttgatcaacccctggtgtcctcatgtggtactggtgtgacagcatgtatattagc 841 Query: 193 tttgggccttcatcgcctcggcaaaactgatgttgccgtgtacgatggatcatggaccga 252 | ||||||| || ||||| |||||||| || ||| | || || |||||||||||||| || Sbjct: 842 tctgggcctccaccgccttggcaaaaccgacgttcctgtatatgatggatcatggactga 901 Query: 253 atggggtgctcaccccgacactccagttgctactgctg 290 |||||| || || || |||||||||||||| ||||||| Sbjct: 902 atggggagcccatcctgacactccagttgccactgctg 939
>dbj|AK120712.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023001O05, full insert sequence Length = 1450 Score = 258 bits (130), Expect = 2e-65 Identities = 242/278 (87%), Gaps = 1/278 (0%) Strand = Plus / Plus Query: 13 ggaataagaagtgggcatgtgcccgggnagcaaatgcgttccttttcctcaggtgcttga 72 ||||||||||||||||||||||| ||| |||||||| |||||||| |||||| ||||||| Sbjct: 964 ggaataagaagtgggcatgtgcctggg-agcaaatgtgttcctttccctcagttgcttga 1022 Query: 73 cagtacacaaaagctattacctgcagatgagctccgtaagcgatttgagcaagaaggtat 132 |||| | ||||||||||||||| |||| ||||||||||| |||||||| ||||||||||| Sbjct: 1023 cagttcgcaaaagctattacctccagaagagctccgtaaacgatttgaacaagaaggtat 1082 Query: 133 atcacttgatcaacccattgtgacctcttgcggcactggtgtgacagcatgtgtattagc 192 ||| |||||||||||| | ||| |||| || || |||||||||||||||||| ||||||| Sbjct: 1083 atcgcttgatcaacccctggtgtcctcatgtggtactggtgtgacagcatgtatattagc 1142 Query: 193 tttgggccttcatcgcctcggcaaaactgatgttgccgtgtacgatggatcatggaccga 252 | ||||||| || ||||| |||||||| | ||| | || || |||||||||||||| || Sbjct: 1143 tctgggcctccaccgccttggcaaaaccaacgttcctgtatatgatggatcatggactga 1202 Query: 253 atggggtgctcaccccgacactccagttgctactgctg 290 |||||| || || || |||||||||||||| ||||||| Sbjct: 1203 atggggagcccatcctgacactccagttgccactgctg 1240
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 83.8 bits (42), Expect = 6e-13 Identities = 60/66 (90%) Strand = Plus / Minus Query: 66 tgcttgacagtacacaaaagctattacctgcagatgagctccgtaagcgatttgagcaag 125 ||||||||||| | ||||||||||||||| |||| ||||||||||| |||||||| |||| Sbjct: 25736637 tgcttgacagttcgcaaaagctattacctccagaagagctccgtaaacgatttgaacaag 25736578 Query: 126 aaggta 131 |||||| Sbjct: 25736577 aaggta 25736572 Score = 69.9 bits (35), Expect = 9e-09 Identities = 51/55 (92%), Gaps = 1/55 (1%) Strand = Plus / Minus Query: 13 ggaataagaagtgggcatgtgcccgggnagcaaatgcgttccttttcctcaggtg 67 ||||||||||||||||||||||| ||| |||||||| |||||||| ||||||||| Sbjct: 25736888 ggaataagaagtgggcatgtgcctggg-agcaaatgtgttcctttccctcaggtg 25736835 Score = 69.9 bits (35), Expect = 9e-09 Identities = 59/67 (88%) Strand = Plus / Minus Query: 127 aggtatatcacttgatcaacccattgtgacctcttgcggcactggtgtgacagcatgtgt 186 ||||||||| |||||||||||| | ||| |||| || || |||||||||||||||||| | Sbjct: 25736154 aggtatatcgcttgatcaacccctggtgtcctcatgtggtactggtgtgacagcatgtat 25736095 Query: 187 attagct 193 ||||||| Sbjct: 25736094 attagct 25736088 Score = 69.9 bits (35), Expect = 9e-09 Identities = 80/95 (84%) Strand = Plus / Minus Query: 196 gggccttcatcgcctcggcaaaactgatgttgccgtgtacgatggatcatggaccgaatg 255 |||||| || ||||| |||||||| || ||| | || || |||||||||||||| ||||| Sbjct: 25736001 gggcctccaccgccttggcaaaaccgacgttcctgtatatgatggatcatggactgaatg 25735942 Query: 256 gggtgctcaccccgacactccagttgctactgctg 290 ||| || || || |||||||||||||| ||||||| Sbjct: 25735941 gggagcccatcctgacactccagttgccactgctg 25735907
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 83.8 bits (42), Expect = 6e-13 Identities = 60/66 (90%) Strand = Plus / Minus Query: 66 tgcttgacagtacacaaaagctattacctgcagatgagctccgtaagcgatttgagcaag 125 ||||||||||| | ||||||||||||||| |||| ||||||||||| |||||||| |||| Sbjct: 25664813 tgcttgacagttcgcaaaagctattacctccagaagagctccgtaaacgatttgaacaag 25664754 Query: 126 aaggta 131 |||||| Sbjct: 25664753 aaggta 25664748 Score = 69.9 bits (35), Expect = 9e-09 Identities = 51/55 (92%), Gaps = 1/55 (1%) Strand = Plus / Minus Query: 13 ggaataagaagtgggcatgtgcccgggnagcaaatgcgttccttttcctcaggtg 67 ||||||||||||||||||||||| ||| |||||||| |||||||| ||||||||| Sbjct: 25665064 ggaataagaagtgggcatgtgcctggg-agcaaatgtgttcctttccctcaggtg 25665011 Score = 69.9 bits (35), Expect = 9e-09 Identities = 59/67 (88%) Strand = Plus / Minus Query: 127 aggtatatcacttgatcaacccattgtgacctcttgcggcactggtgtgacagcatgtgt 186 ||||||||| |||||||||||| | ||| |||| || || |||||||||||||||||| | Sbjct: 25664330 aggtatatcgcttgatcaacccctggtgtcctcatgtggtactggtgtgacagcatgtat 25664271 Query: 187 attagct 193 ||||||| Sbjct: 25664270 attagct 25664264 Score = 69.9 bits (35), Expect = 9e-09 Identities = 80/95 (84%) Strand = Plus / Minus Query: 196 gggccttcatcgcctcggcaaaactgatgttgccgtgtacgatggatcatggaccgaatg 255 |||||| || ||||| |||||||| || ||| | || || |||||||||||||| ||||| Sbjct: 25664177 gggcctccaccgccttggcaaaaccgacgttcctgtatatgatggatcatggactgaatg 25664118 Query: 256 gggtgctcaccccgacactccagttgctactgctg 290 ||| || || || |||||||||||||| ||||||| Sbjct: 25664117 gggagcccatcctgacactccagttgccactgctg 25664083
>emb|AL731881.4|CNS08C8L Oryza sativa chromosome 12, . BAC OSJNBa0002L05 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 167131 Score = 83.8 bits (42), Expect = 6e-13 Identities = 60/66 (90%) Strand = Plus / Minus Query: 66 tgcttgacagtacacaaaagctattacctgcagatgagctccgtaagcgatttgagcaag 125 ||||||||||| | ||||||||||||||| |||| ||||||||||| |||||||| |||| Sbjct: 103875 tgcttgacagttcgcaaaagctattacctccagaagagctccgtaaacgatttgaacaag 103816 Query: 126 aaggta 131 |||||| Sbjct: 103815 aaggta 103810 Score = 69.9 bits (35), Expect = 9e-09 Identities = 51/55 (92%), Gaps = 1/55 (1%) Strand = Plus / Minus Query: 13 ggaataagaagtgggcatgtgcccgggnagcaaatgcgttccttttcctcaggtg 67 ||||||||||||||||||||||| ||| |||||||| |||||||| ||||||||| Sbjct: 104126 ggaataagaagtgggcatgtgcctggg-agcaaatgtgttcctttccctcaggtg 104073 Score = 69.9 bits (35), Expect = 9e-09 Identities = 59/67 (88%) Strand = Plus / Minus Query: 127 aggtatatcacttgatcaacccattgtgacctcttgcggcactggtgtgacagcatgtgt 186 ||||||||| |||||||||||| | ||| |||| || || |||||||||||||||||| | Sbjct: 103392 aggtatatcgcttgatcaacccctggtgtcctcatgtggtactggtgtgacagcatgtat 103333 Query: 187 attagct 193 ||||||| Sbjct: 103332 attagct 103326 Score = 69.9 bits (35), Expect = 9e-09 Identities = 80/95 (84%) Strand = Plus / Minus Query: 196 gggccttcatcgcctcggcaaaactgatgttgccgtgtacgatggatcatggaccgaatg 255 |||||| || ||||| |||||||| || ||| | || || |||||||||||||| ||||| Sbjct: 103239 gggcctccaccgccttggcaaaaccgacgttcctgtatatgatggatcatggactgaatg 103180 Query: 256 gggtgctcaccccgacactccagttgctactgctg 290 ||| || || || |||||||||||||| ||||||| Sbjct: 103179 gggagcccatcctgacactccagttgccactgctg 103145
>gb|AF109156.1|AF109156 Datisca glomerata thiosulfate sulfurtransferase (TST) mRNA, complete cds Length = 1343 Score = 73.8 bits (37), Expect = 6e-10 Identities = 109/133 (81%) Strand = Plus / Plus Query: 149 attgtgacctcttgcggcactggtgtgacagcatgtgtattagctttgggccttcatcgc 208 ||||| |||||||||||||||||||| || || || | | || ||||| || ||||| Sbjct: 1054 attgtaacctcttgcggcactggtgttactgcctgcattctcgcattgggtctccatcgg 1113 Query: 209 ctcggcaaaactgatgttgccgtgtacgatggatcatggaccgaatggggtgctcacccc 268 || || ||| |||||||||| || ||||||||||| ||||| |||||||| || ||| || Sbjct: 1114 cttgggaaatctgatgttgcagtttacgatggatcttggactgaatggggagcacactcc 1173 Query: 269 gacactccagttg 281 ||||| ||||||| Sbjct: 1174 gacacaccagttg 1186 Score = 40.1 bits (20), Expect = 8.1 Identities = 44/51 (86%), Gaps = 1/51 (1%) Strand = Plus / Plus Query: 10 aagggaataagaagtgggcatgtgcccgggnagcaaatgcgttccttttcc 60 ||||| ||||||||||| ||||| || || ||||||||| |||||||||| Sbjct: 916 aaggggataagaagtggccatgt-acctggcagcaaatgcattccttttcc 965
>dbj|AK110310.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-164-B04, full insert sequence Length = 2771 Score = 69.9 bits (35), Expect = 9e-09 Identities = 80/95 (84%) Strand = Plus / Minus Query: 196 gggccttcatcgcctcggcaaaactgatgttgccgtgtacgatggatcatggaccgaatg 255 |||||| || ||||| |||||||| || ||| | || || |||||||||||||| ||||| Sbjct: 2661 gggcctccaccgccttggcaaaaccgacgttcctgtatatgatggatcatggactgaatg 2602 Query: 256 gggtgctcaccccgacactccagttgctactgctg 290 ||| || || || |||||||||||||| ||||||| Sbjct: 2601 gggagcccatcctgacactccagttgccactgctg 2567 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 170 ggtgtgacagcatgtgtattagct 193 ||||||||||||||| |||||||| Sbjct: 2771 ggtgtgacagcatgtatattagct 2748
>ref|XM_464244.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1243 Score = 44.1 bits (22), Expect = 0.52 Identities = 52/62 (83%) Strand = Plus / Plus Query: 92 cctgcagatgagctccgtaagcgatttgagcaagaaggtatatcacttgatcaacccatt 151 |||||||||||| ||||||| |||||||||| ||| ||||| ||||||| |||||| Sbjct: 799 cctgcagatgagatccgtaaaaagtttgagcaagcagggatatcccttgatcgccccatt 858 Query: 152 gt 153 || Sbjct: 859 gt 860
>gb|AC002480.1| Homo sapiens BAC clone GS1-55K18 from 7, complete sequence Length = 200167 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 509 cacctttctttggatctctttt 530 |||||||||||||||||||||| Sbjct: 61430 cacctttctttggatctctttt 61409
>dbj|AK066425.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013065E05, full insert sequence Length = 1243 Score = 44.1 bits (22), Expect = 0.52 Identities = 52/62 (83%) Strand = Plus / Plus Query: 92 cctgcagatgagctccgtaagcgatttgagcaagaaggtatatcacttgatcaacccatt 151 |||||||||||| ||||||| |||||||||| ||| ||||| ||||||| |||||| Sbjct: 799 cctgcagatgagatccgtaaaaagtttgagcaagcagggatatcccttgatcgccccatt 858 Query: 152 gt 153 || Sbjct: 859 gt 860
>ref|XM_423712.1| PREDICTED: Gallus gallus similar to 3-mercaptopyruvate sulfurtransferase (LOC426035), mRNA Length = 1373 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 212 ggcaaaactgatgttgccgtgtacgatgg 240 |||||| | |||||||||||||||||||| Sbjct: 793 ggcaaaccagatgttgccgtgtacgatgg 821
>ref|XM_416283.1| PREDICTED: Gallus gallus similar to 3-mercaptopyruvate sulfurtransferase (LOC418048), mRNA Length = 1480 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 212 ggcaaaactgatgttgccgtgtacgatgg 240 |||||| | |||||||||||||||||||| Sbjct: 903 ggcaaaccagatgttgccgtgtacgatgg 931
>gb|AC083849.6| Homo sapiens BAC clone RP11-163I18 from 7, complete sequence Length = 128611 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 320 catcttttgtgccccaacttg 340 ||||||||||||||||||||| Sbjct: 98307 catcttttgtgccccaacttg 98327
>dbj|AP007175.1| Aspergillus oryzae RIB40 genomic DNA, SC010 Length = 2039961 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 157 ctcttgcggcactggtgtgac 177 ||||||||||||||||||||| Sbjct: 557436 ctcttgcggcactggtgtgac 557416
>emb|BX933201.2| Gallus gallus finished cDNA, clone ChEST511j10 Length = 1338 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 212 ggcaaaactgatgttgccgtgtacgatgg 240 |||||| | |||||||||||||||||||| Sbjct: 758 ggcaaaccagatgttgccgtgtacgatgg 786
>emb|BX933380.1| Gallus gallus finished cDNA, clone ChEST196b19 Length = 1453 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 212 ggcaaaactgatgttgccgtgtacgatgg 240 |||||| | |||||||||||||||||||| Sbjct: 875 ggcaaaccagatgttgccgtgtacgatgg 903
>gb|AC005378.2|AC005378 Homo sapiens PAC clone RP5-1137M13 from 7q33-q35, complete sequence Length = 129036 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 320 catcttttgtgccccaacttg 340 ||||||||||||||||||||| Sbjct: 9930 catcttttgtgccccaacttg 9910
>gb|AC111080.9| Mus musculus chromosome 3, clone RP23-132D7, complete sequence Length = 202074 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 358 tcacaaggcaaaggaaactga 378 ||||||||||||||||||||| Sbjct: 99481 tcacaaggcaaaggaaactga 99461
>ref|NM_197896.1| Oryza sativa (japonica cultivar-group) putative CEO protein (OSJNBa0035H01.4), mRNA Length = 2525 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 351 atgaaggtcacaaggcaaag 370 |||||||||||||||||||| Sbjct: 597 atgaaggtcacaaggcaaag 616
>gb|AC119971.8| Mus musculus chromosome 16, clone RP24-480D8, complete sequence Length = 166093 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 362 aaggcaaaggaaactgaaga 381 |||||||||||||||||||| Sbjct: 97963 aaggcaaaggaaactgaaga 97944
>gb|AC120003.6| Mus musculus chromosome 8, clone RP24-148H22, complete sequence Length = 210466 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 511 cctttctttggatctctttt 530 |||||||||||||||||||| Sbjct: 132817 cctttctttggatctctttt 132836
>gb|AC149610.1| Mus musculus BAC clone RP23-263D11 from chromosome 9, complete sequence Length = 187063 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 445 aacagaggaaaatggaacat 464 |||||||||||||||||||| Sbjct: 119265 aacagaggaaaatggaacat 119284
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 82 aaagctattacctgcagatg 101 |||||||||||||||||||| Sbjct: 1367498 aaagctattacctgcagatg 1367517
>gb|AC117219.2| Mus musculus BAC clone RP23-344D18 from chromosome 9, complete sequence Length = 216199 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 445 aacagaggaaaatggaacat 464 |||||||||||||||||||| Sbjct: 14993 aacagaggaaaatggaacat 15012
>gb|AC125057.5| Mus musculus BAC clone RP23-399K1 from chromosome 12, complete sequence Length = 182276 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 274 tccagttgctactgctgttt 293 |||||||||||||||||||| Sbjct: 47453 tccagttgctactgctgttt 47472
>emb|CR382290.16| Zebrafish DNA sequence from clone CH211-236D22 in linkage group 1, complete sequence Length = 148582 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 383 tatgggtgggtgtaaggttg 402 |||||||||||||||||||| Sbjct: 37668 tatgggtgggtgtaaggttg 37687
>gb|AC108423.10| Mus musculus chromosome 16, clone RP23-443N12, complete sequence Length = 192819 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 362 aaggcaaaggaaactgaaga 381 |||||||||||||||||||| Sbjct: 26086 aaggcaaaggaaactgaaga 26067
>emb|AL079338.16|HSJ841K13 Human DNA sequence from clone RP5-841K13 on chromosome 20 Contains part of the gene for a novel protein (LOC284776), complete sequence Length = 122466 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 85 gctattacctgcagatgagc 104 |||||||||||||||||||| Sbjct: 23929 gctattacctgcagatgagc 23948
>gb|AC027037.6| Oryza sativa chromosome 10 BAC OSJNBa0035H01 genomic sequence, complete sequence Length = 64582 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 351 atgaaggtcacaaggcaaag 370 |||||||||||||||||||| Sbjct: 33674 atgaaggtcacaaggcaaag 33655
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 82 aaagctattacctgcagatg 101 |||||||||||||||||||| Sbjct: 2684915 aaagctattacctgcagatg 2684934
>gb|AC005185.1| Homo sapiens Xp22 BAC GSHB-383H3 (Genome Systems Human BAC Library) complete sequence Length = 124351 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 369 aggaaactgaagagtatggg 388 |||||||||||||||||||| Sbjct: 41322 aggaaactgaagagtatggg 41341
>gb|AC093878.3| Homo sapiens BAC clone RP11-638O6 from 4, complete sequence Length = 176018 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 13 ggaataagaagtgggcatgt 32 |||||||||||||||||||| Sbjct: 29802 ggaataagaagtgggcatgt 29821
>emb|AL114505.1|CNS01BOX Botrytis cinerea strain T4 cDNA library Length = 756 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 506 acccacctttctttggatctcttt 529 ||||||| |||||||||||||||| Sbjct: 530 acccaccattctttggatctcttt 507
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 351 atgaaggtcacaaggcaaag 370 |||||||||||||||||||| Sbjct: 22517956 atgaaggtcacaaggcaaag 22517937
>gb|AC158660.4| Mus musculus 6 BAC RP23-387H1 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 199439 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 515 tctttggatctcttttccat 534 |||||||||||||||||||| Sbjct: 139057 tctttggatctcttttccat 139076
>dbj|AK121290.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023109E12, full insert sequence Length = 1519 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 351 atgaaggtcacaaggcaaag 370 |||||||||||||||||||| Sbjct: 613 atgaaggtcacaaggcaaag 632
>dbj|AK110103.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-160-H10, full insert sequence Length = 3249 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 195 tgggccttcatcgcctcggc 214 |||||||||||||||||||| Sbjct: 829 tgggccttcatcgcctcggc 848
>dbj|AK072769.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023139M21, full insert sequence Length = 2592 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 351 atgaaggtcacaaggcaaag 370 |||||||||||||||||||| Sbjct: 666 atgaaggtcacaaggcaaag 685
>emb|AL450109.3|CNS07EEV Human chromosome 14 DNA sequence BAC R-477I16 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 171997 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 272 actccagttgctactgctgt 291 |||||||||||||||||||| Sbjct: 148387 actccagttgctactgctgt 148368
>emb|AL355835.3|CNS05TCP Human chromosome 14 DNA sequence BAC R-196N22 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 172374 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 272 actccagttgctactgctgt 291 |||||||||||||||||||| Sbjct: 15523 actccagttgctactgctgt 15504
>emb|AL161751.3|CNS01RHG Human chromosome 14 DNA sequence BAC R-96D24 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 184692 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 272 actccagttgctactgctgt 291 |||||||||||||||||||| Sbjct: 51667 actccagttgctactgctgt 51648
>gb|AC006198.1|AC006198 Homo sapiens, clone hRPK.3_A_1, complete sequence Length = 163410 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 85 gctattacctgcagatgagc 104 |||||||||||||||||||| Sbjct: 96727 gctattacctgcagatgagc 96708
>emb|CT573089.2| RP43-058A24, complete sequence Length = 216040 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 369 aggaaactgaagagtatggg 388 |||||||||||||||||||| Sbjct: 14748 aggaaactgaagagtatggg 14729
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 351 atgaaggtcacaaggcaaag 370 |||||||||||||||||||| Sbjct: 22530424 atgaaggtcacaaggcaaag 22530405
>gb|U93163.1|HSU93163 Homo sapiens MAGE-B2 (MAGE-B2), MAGE-B3 (MAGE-B3), MAGE-B4 (MAGE-B4), and MAGE-B1 (MAGE-B1) genes, complete cds Length = 40351 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 369 aggaaactgaagagtatggg 388 |||||||||||||||||||| Sbjct: 10845 aggaaactgaagagtatggg 10864
>emb|AL772207.4| Mouse DNA sequence from clone RP23-91G17 on chromosome 4, complete sequence Length = 148320 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 447 cagaggaaaatggaacatac 466 |||||||||||||||||||| Sbjct: 85881 cagaggaaaatggaacatac 85900 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,347,279 Number of Sequences: 3902068 Number of extensions: 4347279 Number of successful extensions: 84829 Number of sequences better than 10.0: 50 Number of HSP's better than 10.0 without gapping: 48 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 84662 Number of HSP's gapped (non-prelim): 159 length of query: 593 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 570 effective length of database: 17,143,297,704 effective search space: 9771679691280 effective search space used: 9771679691280 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)