| Clone Name | bags18i20 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY596528.1| Saccharum officinarum clone SCAGLR1043D06, complete sequence Length = 1544 Score = 121 bits (61), Expect = 3e-24 Identities = 159/191 (83%), Gaps = 3/191 (1%) Strand = Plus / Plus Query: 17 tggtgataccccaaggcgttctgctcggattagcgagaaagtgaagatatttgatagccc 76 ||||||||| ||||||||||||||||| ||||||||||| |||||| ||||||||||||| Sbjct: 345 tggtgatactccaaggcgttctgctcgcattagcgagaaggtgaaggtatttgatagccc 404 Query: 77 tgagggtgaaaagataccaaagcgtactaggaactcaagtggcagaaaggggaagcaaga 136 |||||||| ||||| ||||| || | || ||||||||||| || ||||| | ||| | Sbjct: 405 agagggtgagaagatcccaaaacgcagcagaaactcaagtggtaggaagggtaggcaggg 464 Query: 137 gaaaaaggagga---tcctgaaactaaagaaggcaaagaaactgaggctggcaaggaggc 193 ||| ||||| || ||||||||| |||||| |||||| |||| ||||||||||||| Sbjct: 465 gaagaaggaagaagcccctgaaactgaagaagccaaagatgctgaaactggcaaggaggc 524 Query: 194 ccccagtgaag 204 || ||||||| Sbjct: 525 tccaagtgaag 535
>gb|AY029558.1| Zea mays putative methyl-binding domain protein MBD105 mRNA, complete cds Length = 1777 Score = 113 bits (57), Expect = 7e-22 Identities = 147/177 (83%) Strand = Plus / Plus Query: 17 tggtgataccccaaggcgttctgctcggattagcgagaaagtgaagatatttgatagccc 76 ||||||||||||||||||||||||||| |||||||||||||| ||| ||||||||||||| Sbjct: 300 tggtgataccccaaggcgttctgctcgtattagcgagaaagtcaaggtatttgatagccc 359 Query: 77 tgagggtgaaaagataccaaagcgtactaggaactcaagtggcagaaaggggaagcaaga 136 ||||| || ||||| || ||||| | |||||||| ||||| || ||||| ||||| | Sbjct: 360 agagggcgagaagatcccgaagcgcagcaggaactccagtggtaggaagggtaagcaggg 419 Query: 137 gaaaaaggaggatcctgaaactaaagaaggcaaagaaactgaggctggcaaggaggc 193 ||| ||||| ||||| || |||||| |||||| |||| ||||||||||||| Sbjct: 420 gaagaaggaaacccctgagaccgaagaagccaaagatgctgaaactggcaaggaggc 476
>dbj|AK072934.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023146E17, full insert sequence Length = 862 Score = 103 bits (52), Expect = 7e-19 Identities = 148/180 (82%) Strand = Plus / Plus Query: 17 tggtgataccccaaggcgttctgctcggattagcgagaaagtgaagatatttgatagccc 76 ||||||||| |||||||| |||||||| |||||||||||||| ||| || |||||||| Sbjct: 370 tggtgatactccaaggcgctctgctcgcattagcgagaaagttaaggctttcgatagccc 429 Query: 77 tgagggtgaaaagataccaaagcgtactaggaactcaagtggcagaaaggggaagcaaga 136 || || || ||||| || || ||| ||||||||||| |||||||||||| ||||| || Sbjct: 430 agaaggggagaagatcccgaaacgttctaggaactcatctggcagaaagggcaagcagga 489 Query: 137 gaaaaaggaggatcctgaaactaaagaaggcaaagaaactgaggctggcaaggaggcccc 196 ||||||||||| | |||| | |||||| ||||| |||| |||| |||||||||||| Sbjct: 490 gaaaaaggaggccaccgaaaatgaagaagcgaaagacgctgaagctgacaaggaggcccc 549
>dbj|AK072503.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023126H05, full insert sequence Length = 1525 Score = 103 bits (52), Expect = 7e-19 Identities = 148/180 (82%) Strand = Plus / Plus Query: 17 tggtgataccccaaggcgttctgctcggattagcgagaaagtgaagatatttgatagccc 76 ||||||||| |||||||| |||||||| |||||||||||||| ||| || |||||||| Sbjct: 362 tggtgatactccaaggcgctctgctcgcattagcgagaaagttaaggctttcgatagccc 421 Query: 77 tgagggtgaaaagataccaaagcgtactaggaactcaagtggcagaaaggggaagcaaga 136 || || || ||||| || || ||| ||||||||||| |||||||||||| ||||| || Sbjct: 422 agaaggggagaagatcccgaaacgttctaggaactcatctggcagaaagggcaagcagga 481 Query: 137 gaaaaaggaggatcctgaaactaaagaaggcaaagaaactgaggctggcaaggaggcccc 196 ||||||||||| | |||| | |||||| ||||| |||| |||| |||||||||||| Sbjct: 482 gaaaaaggaggccaccgaaaatgaagaagcgaaagacgctgaagctgacaaggaggcccc 541
>dbj|AK059006.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-020-H05, full insert sequence Length = 1361 Score = 103 bits (52), Expect = 7e-19 Identities = 148/180 (82%) Strand = Plus / Plus Query: 17 tggtgataccccaaggcgttctgctcggattagcgagaaagtgaagatatttgatagccc 76 ||||||||| |||||||| |||||||| |||||||||||||| ||| || |||||||| Sbjct: 404 tggtgatactccaaggcgctctgctcgcattagcgagaaagttaaggctttcgatagccc 463 Query: 77 tgagggtgaaaagataccaaagcgtactaggaactcaagtggcagaaaggggaagcaaga 136 || || || ||||| || || ||| ||||||||||| |||||||||||| ||||| || Sbjct: 464 agaaggggagaagatcccgaaacgttctaggaactcatctggcagaaagggcaagcagga 523 Query: 137 gaaaaaggaggatcctgaaactaaagaaggcaaagaaactgaggctggcaaggaggcccc 196 ||||||||||| | |||| | |||||| ||||| |||| |||| |||||||||||| Sbjct: 524 gaaaaaggaggccaccgaaaatgaagaagcgaaagacgctgaagctgacaaggaggcccc 583
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 101 bits (51), Expect = 3e-18 Identities = 147/179 (82%) Strand = Plus / Minus Query: 18 ggtgataccccaaggcgttctgctcggattagcgagaaagtgaagatatttgatagccct 77 |||||||| |||||||| |||||||| |||||||||||||| ||| || |||||||| Sbjct: 26460125 ggtgatactccaaggcgctctgctcgcattagcgagaaagttaaggctttcgatagccca 26460066 Query: 78 gagggtgaaaagataccaaagcgtactaggaactcaagtggcagaaaggggaagcaagag 137 || || || ||||| || || ||| ||||||||||| |||||||||||| ||||| ||| Sbjct: 26460065 gaaggggagaagatcccgaaacgttctaggaactcatctggcagaaagggcaagcaggag 26460006 Query: 138 aaaaaggaggatcctgaaactaaagaaggcaaagaaactgaggctggcaaggaggcccc 196 |||||||||| | |||| | |||||| ||||| |||| |||| |||||||||||| Sbjct: 26460005 aaaaaggaggccaccgaaaatgaagaagcgaaagacgctgaagctgacaaggaggcccc 26459947
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 101 bits (51), Expect = 3e-18 Identities = 147/179 (82%) Strand = Plus / Minus Query: 18 ggtgataccccaaggcgttctgctcggattagcgagaaagtgaagatatttgatagccct 77 |||||||| |||||||| |||||||| |||||||||||||| ||| || |||||||| Sbjct: 26388294 ggtgatactccaaggcgctctgctcgcattagcgagaaagttaaggctttcgatagccca 26388235 Query: 78 gagggtgaaaagataccaaagcgtactaggaactcaagtggcagaaaggggaagcaagag 137 || || || ||||| || || ||| ||||||||||| |||||||||||| ||||| ||| Sbjct: 26388234 gaaggggagaagatcccgaaacgttctaggaactcatctggcagaaagggcaagcaggag 26388175 Query: 138 aaaaaggaggatcctgaaactaaagaaggcaaagaaactgaggctggcaaggaggcccc 196 |||||||||| | |||| | |||||| ||||| |||| |||| |||||||||||| Sbjct: 26388174 aaaaaggaggccaccgaaaatgaagaagcgaaagacgctgaagctgacaaggaggcccc 26388116
>emb|AL732532.4|CNS08C97 Oryza sativa chromosome 12, . BAC OSJNBa0027I07 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 146366 Score = 101 bits (51), Expect = 3e-18 Identities = 147/179 (82%) Strand = Plus / Plus Query: 18 ggtgataccccaaggcgttctgctcggattagcgagaaagtgaagatatttgatagccct 77 |||||||| |||||||| |||||||| |||||||||||||| ||| || |||||||| Sbjct: 81951 ggtgatactccaaggcgctctgctcgcattagcgagaaagttaaggctttcgatagccca 82010 Query: 78 gagggtgaaaagataccaaagcgtactaggaactcaagtggcagaaaggggaagcaagag 137 || || || ||||| || || ||| ||||||||||| |||||||||||| ||||| ||| Sbjct: 82011 gaaggggagaagatcccgaaacgttctaggaactcatctggcagaaagggcaagcaggag 82070 Query: 138 aaaaaggaggatcctgaaactaaagaaggcaaagaaactgaggctggcaaggaggcccc 196 |||||||||| | |||| | |||||| ||||| |||| |||| |||||||||||| Sbjct: 82071 aaaaaggaggccaccgaaaatgaagaagcgaaagacgctgaagctgacaaggaggcccc 82129
>gb|AY029559.1| Zea mays putative methyl-binding domain protein MBD106 mRNA, complete cds Length = 1700 Score = 95.6 bits (48), Expect = 2e-16 Identities = 129/156 (82%) Strand = Plus / Plus Query: 17 tggtgataccccaaggcgttctgctcggattagcgagaaagtgaagatatttgatagccc 76 ||||||||||||||||||||||||||| |||||||||||||| ||| | ||||||||||| Sbjct: 287 tggtgataccccaaggcgttctgctcgcattagcgagaaagtcaaggtttttgatagccc 346 Query: 77 tgagggtgaaaagataccaaagcgtactaggaactcaagtggcagaaaggggaagcaaga 136 ||||| || ||||| || || || | |||||||| ||||| || ||||| | ||| | Sbjct: 347 agagggcgagaagatcccgaaacgcagcaggaactccagtggtaggaagggtaggcaggg 406 Query: 137 gaaaaaggaggatcctgaaactaaagaaggcaaaga 172 || ||||| | ||||||||| |||||| |||||| Sbjct: 407 aaagaaggaagcccctgaaactgaagaagccaaaga 442
>gb|AY103948.1| Zea mays PCO124731 mRNA sequence Length = 1792 Score = 95.6 bits (48), Expect = 2e-16 Identities = 129/156 (82%) Strand = Plus / Plus Query: 17 tggtgataccccaaggcgttctgctcggattagcgagaaagtgaagatatttgatagccc 76 ||||||||||||||||||||||||||| |||||||||||||| ||| | ||||||||||| Sbjct: 335 tggtgataccccaaggcgttctgctcgcattagcgagaaagtcaaggtttttgatagccc 394 Query: 77 tgagggtgaaaagataccaaagcgtactaggaactcaagtggcagaaaggggaagcaaga 136 ||||| || ||||| || || || | |||||||| ||||| || ||||| | ||| | Sbjct: 395 agagggcgagaagatcccgaaacgcagcaggaactccagtggtaggaagggtaggcaggg 454 Query: 137 gaaaaaggaggatcctgaaactaaagaaggcaaaga 172 || ||||| | ||||||||| |||||| |||||| Sbjct: 455 aaagaaggaagcccctgaaactgaagaagccaaaga 490
>dbj|AK063843.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-122-C03, full insert sequence Length = 480 Score = 77.8 bits (39), Expect = 4e-11 Identities = 93/111 (83%) Strand = Plus / Plus Query: 17 tggtgataccccaaggcgttctgctcggattagcgagaaagtgaagatatttgatagccc 76 ||||||||| |||||||| |||||||| |||||||||||||| ||| || |||||||| Sbjct: 369 tggtgatactccaaggcgctctgctcgcattagcgagaaagttaaggctttcgatagccc 428 Query: 77 tgagggtgaaaagataccaaagcgtactaggaactcaagtggcagaaaggg 127 || || || ||||| || || ||| ||||||||||| |||||||||||| Sbjct: 429 agaaggggagaagatcccgaaacgttctaggaactcatctggcagaaaggg 479
>emb|AL590293.3| Human DNA sequence from clone RP11-227B10 on chromosome Xq21.33-22.3, complete sequence Length = 67911 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 290 aaatgatgtggagatgaaagttg 312 ||||||||||||||||||||||| Sbjct: 9473 aaatgatgtggagatgaaagttg 9451
>gb|AC146543.2| Gasterosteus aculeatus clone CH213-67L12, complete sequence Length = 197879 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 116 tggcagaaaggggaagcaaga 136 ||||||||||||||||||||| Sbjct: 185375 tggcagaaaggggaagcaaga 185355
>emb|AL390318.20| Human DNA sequence from clone RP11-142L16 on chromosome 10 Contains the 5' end of the PIP5K2A gene for phosphatidylinositol-4-phosphate 5-kinase type II alpha and one CpG island, complete sequence Length = 164955 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 99 cgtactaggaactcaagtggcagaa 123 ||||| ||||||||||||||||||| Sbjct: 69261 cgtaccaggaactcaagtggcagaa 69285
>emb|AL356093.20| Human DNA sequence from clone RP11-382K22 on chromosome 10 Contains a ribosomal protein L7 (RPL7) pseudogene, complete sequence Length = 200536 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 134 agagaaaaaggaggatcctga 154 ||||||||||||||||||||| Sbjct: 44478 agagaaaaaggaggatcctga 44498
>emb|AL159161.11| Human DNA sequence from clone RP11-95N14 on chromosome 13 Contains the 5' end of the gene similar to G protein coupled receptor affecting testicular descent (H. sapiens)(GREAT), complete sequence Length = 90724 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 120 agaaaggggaagcaagagaaaaaggagga 148 |||||| || ||||||||||||||||||| Sbjct: 56548 agaaagcgggagcaagagaaaaaggagga 56520
>emb|AL133343.23| Human DNA sequence from clone RP11-410N8 on chromosome 20 Contains the 5' end of two variants of the C20orf112 gene for a novel protein similar to nucleolar protein 4 (NOL4), three novel genes and a CpG island, complete sequence Length = 63609 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 169 aagaaactgaggctggcaagg 189 ||||||||||||||||||||| Sbjct: 6653 aagaaactgaggctggcaagg 6673
>gb|AC144489.2| Gasterosteus aculeatus clone CH213-2D11, complete sequence Length = 228976 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 116 tggcagaaaggggaagcaaga 136 ||||||||||||||||||||| Sbjct: 33304 tggcagaaaggggaagcaaga 33284
>gb|BC055616.1| Danio rerio zgc:66359, mRNA (cDNA clone MGC:66359 IMAGE:5604997), complete cds Length = 1631 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 154 aaactaaagaaggcaaagaaa 174 ||||||||||||||||||||| Sbjct: 1100 aaactaaagaaggcaaagaaa 1120
>gb|AC007760.6|AC007760 Drosophila melanogaster, chromosome 3R, region 89B-89B, BAC clone BACR37I18, complete sequence Length = 195037 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 154 aaactaaagaaggcaaagaaa 174 ||||||||||||||||||||| Sbjct: 23046 aaactaaagaaggcaaagaaa 23066
>gb|AC007726.7|AC007726 Drosophila melanogaster, chromosome 3R, region 89B-89B, BAC clone BACR05C20, complete sequence Length = 177278 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 154 aaactaaagaaggcaaagaaa 174 ||||||||||||||||||||| Sbjct: 167404 aaactaaagaaggcaaagaaa 167424
>ref|NM_200522.1| Danio rerio zgc:66359 (zgc:66359), mRNA Length = 1631 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 154 aaactaaagaaggcaaagaaa 174 ||||||||||||||||||||| Sbjct: 1100 aaactaaagaaggcaaagaaa 1120
>emb|BX088652.6| Zebrafish DNA sequence from clone DKEY-256M19 in linkage group 1, complete sequence Length = 161341 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 154 aaactaaagaaggcaaagaaa 174 ||||||||||||||||||||| Sbjct: 5394 aaactaaagaaggcaaagaaa 5414
>gb|AE003712.1| Drosophila melanogaster chromosome 3R, section 50 of 118 of the complete sequence Length = 226200 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 154 aaactaaagaaggcaaagaaa 174 ||||||||||||||||||||| Sbjct: 22458 aaactaaagaaggcaaagaaa 22478
>emb|AL844882.9| Mouse DNA sequence from clone RP23-360H15 on chromosome 2, complete sequence Length = 167978 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 124 aggggaagcaagagaaaaaggagga 148 |||||||| |||||||||||||||| Sbjct: 16662 aggggaagaaagagaaaaaggagga 16686
>gb|AY864066.1| Homo sapiens cyclin B2 (CCNB2) gene, complete cds Length = 23788 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 127 ggaagcaagagaaaaaggag 146 |||||||||||||||||||| Sbjct: 7118 ggaagcaagagaaaaaggag 7099
>gb|AC113013.15| Mus musculus chromosome 7, clone RP23-174K7, complete sequence Length = 235823 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 129 aagcaagagaaaaaggagga 148 |||||||||||||||||||| Sbjct: 208661 aagcaagagaaaaaggagga 208642
>gb|AY282538.1| Homo sapiens UDP-glucuronosyltransferase 1A9 (UGT1A9) gene, variant promoter region, 5' UTR, and partial cds Length = 6799 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 128 gaagcaagagaaaaaggagg 147 |||||||||||||||||||| Sbjct: 31 gaagcaagagaaaaaggagg 50
>gb|AY345903.1| Homo sapiens UDP-glucuronosyltransferase 1A9 (UGT1A9) gene, variant promoter region, 5' UTR, and partial cds Length = 6799 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 128 gaagcaagagaaaaaggagg 147 |||||||||||||||||||| Sbjct: 31 gaagcaagagaaaaaggagg 50
>gb|AY282539.1| Homo sapiens UDP-glucuronosyltransferase 1A9 (UGT1A9) gene, variant promoter region, 5' UTR, and partial cds Length = 6799 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 128 gaagcaagagaaaaaggagg 147 |||||||||||||||||||| Sbjct: 31 gaagcaagagaaaaaggagg 50
>gb|AY282541.1| Homo sapiens UDP-glucuronosyltransferase 1A9 (UGT1A9) gene, variant promoter region, 5' UTR, and partial cds Length = 6798 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 128 gaagcaagagaaaaaggagg 147 |||||||||||||||||||| Sbjct: 31 gaagcaagagaaaaaggagg 50
>gb|AY282534.1| Homo sapiens UDP-glucuronosyltransferase 1A9 (UGT1A9) gene, variant promoter region, 5' UTR, and partial cds Length = 6799 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 128 gaagcaagagaaaaaggagg 147 |||||||||||||||||||| Sbjct: 31 gaagcaagagaaaaaggagg 50
>gb|AY282535.1| Homo sapiens UDP-glucuronosyltransferase 1A9 (UGT1A9) gene, variant promoter region, 5' UTR, and partial cds Length = 6800 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 128 gaagcaagagaaaaaggagg 147 |||||||||||||||||||| Sbjct: 31 gaagcaagagaaaaaggagg 50
>gb|AC093339.17| Mus musculus chromosome 19, clone RP23-5G6, complete sequence Length = 218747 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 119 cagaaaggggaagcaagaga 138 |||||||||||||||||||| Sbjct: 127907 cagaaaggggaagcaagaga 127926
>gb|AC164294.2| Mus musculus BAC clone RP24-556J13 from chromosome 14, complete sequence Length = 143851 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 375 cccgcagaacacaaggaaga 394 |||||||||||||||||||| Sbjct: 138798 cccgcagaacacaaggaaga 138817
>gb|AC166830.3| Mus musculus BAC clone RP23-246O1 from chromosome 13, complete sequence Length = 213487 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 170 agaaactgaggctggcaaggaggc 193 |||||||||||||| ||||||||| Sbjct: 7451 agaaactgaggctgccaaggaggc 7428
>ref|XM_475121.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1884 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 385 acaaggaagatgtcaaacta 404 |||||||||||||||||||| Sbjct: 269 acaaggaagatgtcaaacta 288
>ref|XM_472990.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2757 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 242 gattgaagctgcaaagagca 261 |||||||||||||||||||| Sbjct: 1644 gattgaagctgcaaagagca 1663
>ref|NG_002601.1| Homo sapiens UDP glucuronosyltransferase 1 family, polypeptide A cluster (UGT1A@) on chromosome 2 Length = 189056 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 128 gaagcaagagaaaaaggagg 147 |||||||||||||||||||| Sbjct: 81401 gaagcaagagaaaaaggagg 81420 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 128 gaagcaagagaaaaaggagg 147 |||||||||||||||||||| Sbjct: 72703 gaagcaagagaaaaaggagg 72722 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 128 gaagcaagagaaaaaggagg 147 |||||||||||||||||||| Sbjct: 23546 gaagcaagagaaaaaggagg 23565
>ref|XM_914175.2| PREDICTED: Mus musculus a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 13 (Adamts13), mRNA Length = 4079 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 437 ggaagacatgcaggaagatg 456 |||||||||||||||||||| Sbjct: 3808 ggaagacatgcaggaagatg 3827
>ref|XM_862182.1| PREDICTED: Canis familiaris similar to REST corepressor 2, transcript variant 3 (LOC483768), mRNA Length = 1579 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 177 gaggctggcaaggaggcccc 196 |||||||||||||||||||| Sbjct: 1242 gaggctggcaaggaggcccc 1223
>ref|XM_862169.1| PREDICTED: Canis familiaris similar to REST corepressor 2, transcript variant 2 (LOC483768), mRNA Length = 1600 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 177 gaggctggcaaggaggcccc 196 |||||||||||||||||||| Sbjct: 1263 gaggctggcaaggaggcccc 1244
>ref|XM_540889.2| PREDICTED: Canis familiaris similar to REST corepressor 2, transcript variant 1 (LOC483768), mRNA Length = 1573 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 177 gaggctggcaaggaggcccc 196 |||||||||||||||||||| Sbjct: 1236 gaggctggcaaggaggcccc 1217
>emb|CR733881.2|CNS0GT1K Tetraodon nigroviridis full-length cDNA Length = 568 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 309 gttgatgaagaggtgaaagctgct 332 ||||||||||| |||||||||||| Sbjct: 431 gttgatgaagatgtgaaagctgct 408
>emb|CR720476.2|CNS0GIV6 Tetraodon nigroviridis full-length cDNA Length = 577 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 309 gttgatgaagaggtgaaagctgct 332 ||||||||||| |||||||||||| Sbjct: 457 gttgatgaagatgtgaaagctgct 434
>emb|CR717798.2|CNS0GGSS Tetraodon nigroviridis full-length cDNA Length = 553 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 309 gttgatgaagaggtgaaagctgct 332 ||||||||||| |||||||||||| Sbjct: 416 gttgatgaagatgtgaaagctgct 393
>emb|CR716786.2|CNS0GG0R Tetraodon nigroviridis full-length cDNA Length = 526 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 309 gttgatgaagaggtgaaagctgct 332 ||||||||||| |||||||||||| Sbjct: 389 gttgatgaagacgtgaaagctgct 366
>emb|CR706085.2|CNS0G7RL Tetraodon nigroviridis full-length cDNA Length = 668 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 309 gttgatgaagaggtgaaagctgct 332 ||||||||||| |||||||||||| Sbjct: 424 gttgatgaagatgtgaaagctgct 401
>emb|CR706333.2|CNS0G7YH Tetraodon nigroviridis full-length cDNA Length = 677 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 309 gttgatgaagaggtgaaagctgct 332 ||||||||||| |||||||||||| Sbjct: 424 gttgatgaagacgtgaaagctgct 401
>emb|CR702087.2|CNS0G4OJ Tetraodon nigroviridis full-length cDNA Length = 559 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 309 gttgatgaagaggtgaaagctgct 332 ||||||||||| |||||||||||| Sbjct: 422 gttgatgaagatgtgaaagctgct 399
>emb|CR698551.2|CNS0G1YB Tetraodon nigroviridis full-length cDNA Length = 558 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 309 gttgatgaagaggtgaaagctgct 332 ||||||||||| |||||||||||| Sbjct: 425 gttgatgaagatgtgaaagctgct 402
>emb|CR688935.2|CNS0FUJ7 Tetraodon nigroviridis full-length cDNA Length = 580 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 309 gttgatgaagaggtgaaagctgct 332 ||||||||||| |||||||||||| Sbjct: 443 gttgatgaagatgtgaaagctgct 420
>emb|CR686526.2|CNS0FSOA Tetraodon nigroviridis full-length cDNA Length = 525 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 309 gttgatgaagaggtgaaagctgct 332 ||||||||||| |||||||||||| Sbjct: 392 gttgatgaagatgtgaaagctgct 369
>emb|CR673871.2|CNS0FIXH Tetraodon nigroviridis full-length cDNA Length = 595 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 309 gttgatgaagaggtgaaagctgct 332 ||||||||||| |||||||||||| Sbjct: 462 gttgatgaagatgtgaaagctgct 439
>emb|CR632767.2|CNS0EN7P Tetraodon nigroviridis full-length cDNA Length = 522 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 309 gttgatgaagaggtgaaagctgct 332 ||||||||||| |||||||||||| Sbjct: 389 gttgatgaagacgtgaaagctgct 366
>emb|CR634094.2|CNS0EO8K Tetraodon nigroviridis full-length cDNA Length = 564 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 309 gttgatgaagaggtgaaagctgct 332 ||||||||||| |||||||||||| Sbjct: 429 gttgatgaagatgtgaaagctgct 406
>emb|CR633412.2|CNS0ENPM Tetraodon nigroviridis full-length cDNA Length = 522 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 309 gttgatgaagaggtgaaagctgct 332 ||||||||||| |||||||||||| Sbjct: 389 gttgatgaagacgtgaaagctgct 366
>emb|CR632968.2|CNS0ENDA Tetraodon nigroviridis full-length cDNA Length = 522 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 309 gttgatgaagaggtgaaagctgct 332 ||||||||||| |||||||||||| Sbjct: 389 gttgatgaagacgtgaaagctgct 366
>gb|AC146568.11| Medicago truncatula clone mth2-101o18, complete sequence Length = 129921 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 288 acaaatgatgtggagatgaa 307 |||||||||||||||||||| Sbjct: 64052 acaaatgatgtggagatgaa 64071
>gb|AC090008.14| Mus muclulus Strain C57BL6/J chromosome 2 BAC, RP23-163H21, Complete Sequence, complete sequence Length = 196733 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 437 ggaagacatgcaggaagatg 456 |||||||||||||||||||| Sbjct: 5129 ggaagacatgcaggaagatg 5110
>emb|AL450311.11| Human DNA sequence from clone RP11-343J3 on chromosome 10 Contains the NEUROG3 gene for neurogenin 3 (ngn3, Atoh5, Math4B), a novel gene, an ATP synthase 6 (MTATP6)(ATP6) pseudogene, a cytochrome c oxidase II (MTCO2)(COII) pseudogene, a cytochrome c oxidase I (MTCO1)(COI) pseudogene, a NADH dehydrogenase 2 (MTND2) pseudogene, a NADH dehydrogenase 1 (MTND1) pseudogene, the gene for a novel protein (LOC219738), the 5' end of a novel gene and four CpG islands, complete sequence Length = 165110 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 180 gctggcaaggaggcccccag 199 |||||||||||||||||||| Sbjct: 103707 gctggcaaggaggcccccag 103726
>emb|AL121749.14|HSBA425A6 Human DNA sequence from clone RP11-425A6 on chromosome 10 Contains the 3' end of the gene for cyclin fold protein 1 (CFP1) (CBCP1), the gene for connexin40.1 (CX40.1) (FLJ90023), the FZD8 gene for frizzled homolog 8 (Drosophila) and two CpG islands, complete sequence Length = 166007 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 116 tggcagaaaggggaagcaag 135 |||||||||||||||||||| Sbjct: 150949 tggcagaaaggggaagcaag 150930
>gb|AC091762.27| Mus musculus strain C57BL/6J clone rp23-151n4 map 2, complete sequence Length = 204734 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 437 ggaagacatgcaggaagatg 456 |||||||||||||||||||| Sbjct: 196179 ggaagacatgcaggaagatg 196160
>emb|BX323824.17| Zebrafish DNA sequence from clone DKEY-37F18 in linkage group 25, complete sequence Length = 168743 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 116 tggcagaaaggggaagcaag 135 |||||||||||||||||||| Sbjct: 78262 tggcagaaaggggaagcaag 78281
>emb|AL731617.3|OSJN00261 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0076N16, complete sequence Length = 146313 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 242 gattgaagctgcaaagagca 261 |||||||||||||||||||| Sbjct: 78836 gattgaagctgcaaagagca 78855
>gb|AC102076.9| Mus musculus chromosome 7, clone RP23-401P12, complete sequence Length = 199219 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 129 aagcaagagaaaaaggagga 148 |||||||||||||||||||| Sbjct: 11330 aagcaagagaaaaaggagga 11311
>gb|AC137553.45| Medicago truncatula clone mth2-20p12, complete sequence Length = 134249 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 288 acaaatgatgtggagatgaa 307 |||||||||||||||||||| Sbjct: 30088 acaaatgatgtggagatgaa 30107
>gb|AC105316.5| Homo sapiens BAC clone RP11-524B5 from 4, complete sequence Length = 148571 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 106 ggaactcaagtggcagaaag 125 |||||||||||||||||||| Sbjct: 10936 ggaactcaagtggcagaaag 10917
>dbj|AK145252.1| Mus musculus mammary gland RCB-0527 Jyg-MC(B) cDNA, RIKEN full-length enriched library, clone:G930027N08 product:NUANCE (Fragment) homolog [Mus musculus], full insert sequence Length = 3077 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 gctgcaaagagcactgatgt 268 |||||||||||||||||||| Sbjct: 1957 gctgcaaagagcactgatgt 1976
>gb|AF297093.1| Homo sapiens UGT1 gene locus, complete sequence Length = 198872 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 128 gaagcaagagaaaaaggagg 147 |||||||||||||||||||| Sbjct: 82750 gaagcaagagaaaaaggagg 82769 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 128 gaagcaagagaaaaaggagg 147 |||||||||||||||||||| Sbjct: 74041 gaagcaagagaaaaaggagg 74060 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 128 gaagcaagagaaaaaggagg 147 |||||||||||||||||||| Sbjct: 24841 gaagcaagagaaaaaggagg 24860
>gb|AC092756.2| Homo sapiens chromosome 15 clone RP11-429D19 map 15q21.3, complete sequence Length = 189999 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 127 ggaagcaagagaaaaaggag 146 |||||||||||||||||||| Sbjct: 10147 ggaagcaagagaaaaaggag 10128
>gb|AC160940.2| Pan troglodytes BAC clone CH251-503N14 from chromosome unknown, complete sequence Length = 168869 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 128 gaagcaagagaaaaaggagg 147 |||||||||||||||||||| Sbjct: 150826 gaagcaagagaaaaaggagg 150807
>dbj|AK157459.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched library, clone:F830217G10 product:weakly similar to Von Willebrand factor-cleaving protease precursor [Homo sapiens], full insert sequence Length = 4423 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 437 ggaagacatgcaggaagatg 456 |||||||||||||||||||| Sbjct: 3727 ggaagacatgcaggaagatg 3746
>gb|AC027654.3| Mus musculus strain C57BL6/J chromosome 6 clone RP23-219K14, complete sequence Length = 223678 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 120 agaaaggggaagcaagagaa 139 |||||||||||||||||||| Sbjct: 69944 agaaaggggaagcaagagaa 69963
>gb|AC121223.5| Rattus norvegicus BAC CH230-70M4 (Children's Hospital Oakland Research Institute Rat (BN/SsNHsd/MCW) BAC library) complete sequence Length = 263147 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 52 agaaagtgaagatatttgat 71 |||||||||||||||||||| Sbjct: 234176 agaaagtgaagatatttgat 234157
>gb|AC092757.2| Homo sapiens chromosome 15 clone RP11-59H7 map 15q21.3, complete sequence Length = 171114 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 127 ggaagcaagagaaaaaggag 146 |||||||||||||||||||| Sbjct: 124664 ggaagcaagagaaaaaggag 124645
>gb|AC161267.2| Mus musculus BAC clone RP23-247F21 from chromosome 13, complete sequence Length = 176277 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 170 agaaactgaggctggcaaggaggc 193 |||||||||||||| ||||||||| Sbjct: 128707 agaaactgaggctgccaaggaggc 128684
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 242 gattgaagctgcaaagagca 261 |||||||||||||||||||| Sbjct: 24519205 gattgaagctgcaaagagca 24519224
>gb|AC156806.2| Pan troglodytes BAC clone CH251-342H5 from chromosome unknown, complete sequence Length = 172860 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 128 gaagcaagagaaaaaggagg 147 |||||||||||||||||||| Sbjct: 162768 gaagcaagagaaaaaggagg 162787
>gb|AC156944.2| Pan troglodytes BAC clone CH251-396D8 from chromosome unknown, complete sequence Length = 173296 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 128 gaagcaagagaaaaaggagg 147 |||||||||||||||||||| Sbjct: 116960 gaagcaagagaaaaaggagg 116979
>gb|AC019072.7| Homo sapiens BAC clone RP11-289A15 from 2, complete sequence Length = 148438 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 128 gaagcaagagaaaaaggagg 147 |||||||||||||||||||| Sbjct: 67722 gaagcaagagaaaaaggagg 67703 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 128 gaagcaagagaaaaaggagg 147 |||||||||||||||||||| Sbjct: 18565 gaagcaagagaaaaaggagg 18546 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 128 gaagcaagagaaaaaggagg 147 |||||||||||||||||||| Sbjct: 9867 gaagcaagagaaaaaggagg 9848
>gb|AC016549.8| Homo sapiens chromosome 5 clone CTC-250P22, complete sequence Length = 167830 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 128 gaagcaagagaaaaaggagg 147 |||||||||||||||||||| Sbjct: 70265 gaagcaagagaaaaaggagg 70284
>gb|AC158663.2| Mus musculus BAC RP23-16J8 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 216101 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 120 agaaaggggaagcaagagaa 139 |||||||||||||||||||| Sbjct: 186045 agaaaggggaagcaagagaa 186064
>dbj|AB095445.1| Mus musculus gene for VWF-cleaving protease Adamts-13, complete cds Length = 33412 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 437 ggaagacatgcaggaagatg 456 |||||||||||||||||||| Sbjct: 30210 ggaagacatgcaggaagatg 30229
>dbj|AB112362.1| Mus musculus Adamts13 mRNA for vWF-cleaving protease, complete cds Length = 4281 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 437 ggaagacatgcaggaagatg 456 |||||||||||||||||||| Sbjct: 3764 ggaagacatgcaggaagatg 3783
>dbj|AK069045.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023010C01, full insert sequence Length = 3326 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 242 gattgaagctgcaaagagca 261 |||||||||||||||||||| Sbjct: 1931 gattgaagctgcaaagagca 1950
>emb|AL355096.4|CNS05TCF Human chromosome 14 DNA sequence BAC R-168L7 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 189389 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 121 gaaaggggaagcaagagaaa 140 |||||||||||||||||||| Sbjct: 99419 gaaaggggaagcaagagaaa 99438
>gb|AC110118.8| Rattus norvegicus BAC CH230-310N6 (Children's Hospital Oakland Research Institute Rat (BN/SsNHsd/MCW) BAC library) complete sequence Length = 175663 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 52 agaaagtgaagatatttgat 71 |||||||||||||||||||| Sbjct: 145350 agaaagtgaagatatttgat 145331
>emb|AL606613.3|OSJN00051 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0084K20, complete sequence Length = 116983 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 242 gattgaagctgcaaagagca 261 |||||||||||||||||||| Sbjct: 112527 gattgaagctgcaaagagca 112546
>ref|NM_001001322.1| Mus musculus a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 13 (Adamts13), mRNA Length = 4281 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 437 ggaagacatgcaggaagatg 456 |||||||||||||||||||| Sbjct: 3764 ggaagacatgcaggaagatg 3783
>emb|CT010511.9| Mouse DNA sequence from clone RP23-222I19 on chromosome 14, complete sequence Length = 181740 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 375 cccgcagaacacaaggaaga 394 |||||||||||||||||||| Sbjct: 152618 cccgcagaacacaaggaaga 152599
>emb|CT025555.7| Mouse DNA sequence from clone RP24-84E11 on chromosome 13, complete sequence Length = 197389 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 170 agaaactgaggctggcaaggaggc 193 |||||||||||||| ||||||||| Sbjct: 189728 agaaactgaggctgccaaggaggc 189705
>gb|AC162912.5| Mus musculus BAC clone RP24-381G1 from chromosome 13, complete sequence Length = 190181 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 170 agaaactgaggctggcaaggaggc 193 |||||||||||||| ||||||||| Sbjct: 90931 agaaactgaggctgccaaggaggc 90908
>emb|AL845266.2| Mouse DNA sequence from clone RP23-449M10 on chromosome 2, complete sequence Length = 171836 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 437 ggaagacatgcaggaagatg 456 |||||||||||||||||||| Sbjct: 27524 ggaagacatgcaggaagatg 27543 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,962,474 Number of Sequences: 3902068 Number of extensions: 5962474 Number of successful extensions: 125530 Number of sequences better than 10.0: 94 Number of HSP's better than 10.0 without gapping: 94 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 125269 Number of HSP's gapped (non-prelim): 255 length of query: 618 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 595 effective length of database: 17,143,297,704 effective search space: 10200262133880 effective search space used: 10200262133880 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)