>gb|BT016515.1| Zea mays clone Contig348 mRNA sequence
          Length = 1716

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 166  gtctctgctatgaaaggaggccgtga 191
            |||||||| |||||||||||||||||
Sbjct: 1049 gtctctgccatgaaaggaggccgtga 1074

>ref|XM_503502.1| Yarrowia lipolytica CLIB122, YALI0E03520g predicted mRNA
          Length = 426

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 62 aaggaggtgatgggaactcccg 83
          ||||||||||||||||||||||
Sbjct: 74 aaggaggtgatgggaactcccg 95

>gb|AC157798.5| Mus musculus chromosome 1, clone RP24-153N24, complete sequence
          Length = 163087

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 326   acaagagtaagcagaaacaaaa 347
             ||||||||||||||||||||||
Sbjct: 62221 acaagagtaagcagaaacaaaa 62200

>emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB 122 of Yarrowia
              lipolytica
          Length = 4224103

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 62     aaggaggtgatgggaactcccg 83
              ||||||||||||||||||||||
Sbjct: 386576 aaggaggtgatgggaactcccg 386555

>ref|XM_475080.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 795

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 317 ggaagaaggacaagagtaagcagaa 341
           ||||||||||||||| |||||||||
Sbjct: 509 ggaagaaggacaagaataagcagaa 533

>ref|XM_614281.2| PREDICTED: Bos taurus similar to Probable ubiquitin ligase protein
            MYCBP2 (Myc binding protein 2) (Protein associated with
            Myc) (Pam/highwire/rpm-1 protein) (LOC534496), mRNA
          Length = 13347

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 427  gtgcccgggccgtcttcgcct 447
            |||||||||||||||||||||
Sbjct: 9140 gtgcccgggccgtcttcgcct 9160

>gb|AC151834.7| Mus musculus BAC clone RP23-382M10 from chromosome 8, complete sequence
          Length = 208404

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 469   gtggaggaggccgaggtgctggact 493
             ||||||||||||||||| |||||||
Sbjct: 13312 gtggaggaggccgaggtcctggact 13336

>gb|AC023024.6| Homo sapiens, clone RP11-299G20, complete sequence
          Length = 183671

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 45     aggaataaagagaggcaaagg 65
              |||||||||||||||||||||
Sbjct: 175845 aggaataaagagaggcaaagg 175865

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5,
              complete sequence
          Length = 29737217

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 317    ggaagaaggacaagagtaagcagaa 341
              ||||||||||||||| |||||||||
Sbjct: 688415 ggaagaaggacaagaataagcagaa 688391

>gb|AC087528.15| Homo sapiens chromosome 15, clone RP11-497M17, complete sequence
          Length = 142965

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 45     aggaataaagagaggcaaagg 65
              |||||||||||||||||||||
Sbjct: 124885 aggaataaagagaggcaaagg 124865

>gb|AC151713.4| Mus musculus BAC clone RP24-100K9 from chromosome 8, complete
            sequence
          Length = 199295

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 469  gtggaggaggccgaggtgctggact 493
            ||||||||||||||||| |||||||
Sbjct: 6895 gtggaggaggccgaggtcctggact 6871

>dbj|AB118017.1| Oryza sativa (japonica cultivar-group) bip130 mRNA for BRI1-KD
           interacting protein 130, complete cds
          Length = 1036

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 317 ggaagaaggacaagagtaagcagaa 341
           ||||||||||||||| |||||||||
Sbjct: 516 ggaagaaggacaagaataagcagaa 540

>dbj|AK120850.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023023G21, full
            insert sequence
          Length = 1686

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 317  ggaagaaggacaagagtaagcagaa 341
            ||||||||||||||| |||||||||
Sbjct: 1148 ggaagaaggacaagaataagcagaa 1172

>dbj|AK072323.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023029D02, full
            insert sequence
          Length = 1525

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 317  ggaagaaggacaagagtaagcagaa 341
            ||||||||||||||| |||||||||
Sbjct: 1147 ggaagaaggacaagaataagcagaa 1171

>dbj|AK067532.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013108A09, full
            insert sequence
          Length = 1518

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 317  ggaagaaggacaagagtaagcagaa 341
            ||||||||||||||| |||||||||
Sbjct: 1001 ggaagaaggacaagaataagcagaa 1025

>dbj|AK065006.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001E14, full
            insert sequence
          Length = 1666

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 317  ggaagaaggacaagagtaagcagaa 341
            ||||||||||||||| |||||||||
Sbjct: 1148 ggaagaaggacaagaataagcagaa 1172

>dbj|AK061727.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-B07, full
           insert sequence
          Length = 1136

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 317 ggaagaaggacaagagtaagcagaa 341
           ||||||||||||||| |||||||||
Sbjct: 619 ggaagaaggacaagaataagcagaa 643

>gb|AC105327.13| Mus musculus chromosome 8, clone RP24-323I19, complete sequence
          Length = 215363

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 469   gtggaggaggccgaggtgctggact 493
             ||||||||||||||||| |||||||
Sbjct: 99232 gtggaggaggccgaggtcctggact 99256

>gb|AC093921.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBb0041A22, complete sequence
          Length = 117919

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 317   ggaagaaggacaagagtaagcagaa 341
             ||||||||||||||| |||||||||
Sbjct: 33614 ggaagaaggacaagaataagcagaa 33590

>ref|XM_470958.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1146

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 465 ggaagtggaggaggccgagg 484
           ||||||||||||||||||||
Sbjct: 256 ggaagtggaggaggccgagg 237

>emb|AL589943.26| Human DNA sequence from clone RP11-44D23 on chromosome 10, complete
             sequence
          Length = 139325

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 44    caggaataaagagaggcaaa 63
             ||||||||||||||||||||
Sbjct: 50208 caggaataaagagaggcaaa 50189

>emb|BX572091.1| Prochlorococcus marinus MED4 complete genome; segment 2/5
          Length = 349082

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 327   caagagtaagcagaaacaaa 346
             ||||||||||||||||||||
Sbjct: 88329 caagagtaagcagaaacaaa 88310

>emb|AL662935.3|OSJN00146 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0094O15,
            complete sequence
          Length = 144778

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 465  ggaagtggaggaggccgagg 484
            ||||||||||||||||||||
Sbjct: 2956 ggaagtggaggaggccgagg 2937

>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome
          Length = 4967148

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 469     gtggaggaggccgaggtgctggactaca 496
               |||||||||| ||||||||||| |||||
Sbjct: 2359908 gtggaggagggcgaggtgctgggctaca 2359935

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4,
              complete sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 465    ggaagtggaggaggccgagg 484
              ||||||||||||||||||||
Sbjct: 207136 ggaagtggaggaggccgagg 207117

>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome
          Length = 3147090

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 396     cgacgccgcccacaacccgc 415
               ||||||||||||||||||||
Sbjct: 2424223 cgacgccgcccacaacccgc 2424204

>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 360     gaagtcgcgcggcaacggca 379
               ||||||||||||||||||||
Sbjct: 1512001 gaagtcgcgcggcaacggca 1512020

>ref|XM_316207.2| Anopheles gambiae str. PEST ENSANGP00000017701
           (ENSANGG00000015212), partial mRNA
          Length = 510

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 368 gcggcaacggcaagaagagc 387
           ||||||||||||||||||||
Sbjct: 50  gcggcaacggcaagaagagc 31

>dbj|AK070873.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023071K13, full
           insert sequence
          Length = 1867

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 465 ggaagtggaggaggccgagg 484
           ||||||||||||||||||||
Sbjct: 467 ggaagtggaggaggccgagg 448

>gb|AY103983.1| Zea mays PCO126984 mRNA sequence
          Length = 1158

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 38/44 (86%)
 Strand = Plus / Plus

                                                       
Query: 220 gaaaaccgccgcgtgaactgggccccagatgtgtacgacccccc 263
           ||||||||||  || || ||||| || |||||||||||||||||
Sbjct: 493 gaaaaccgccatgtcaagtgggctcctgatgtgtacgacccccc 536

>emb|AL606442.3|OSJN00014 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0068L06,
              complete sequence
          Length = 145517

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 465    ggaagtggaggaggccgagg 484
              ||||||||||||||||||||
Sbjct: 138423 ggaagtggaggaggccgagg 138404

>gb|M74216.1|ROTVP1A Porcine rotavirus group C minor internal core protein (VP1) gene
            (segment 1), complete cds
          Length = 3290

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 313  tccaggaagaaggacaagag 332
            ||||||||||||||||||||
Sbjct: 1369 tccaggaagaaggacaagag 1388


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,475,278
Number of Sequences: 3902068
Number of extensions: 4475278
Number of successful extensions: 86070
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 85731
Number of HSP's gapped (non-prelim): 339
length of query: 562
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 539
effective length of database: 17,143,297,704
effective search space: 9240237462456
effective search space used: 9240237462456
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)