| Clone Name | bags18i02 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | VC04_SWPVK (P32228) Protein C4 | 33 | 0.79 | 2 | LEPA_BACHD (Q9KD76) GTP-binding protein lepA | 30 | 3.9 | 3 | LEPA_CLOAB (Q97JJ6) GTP-binding protein lepA | 29 | 8.7 | 4 | 2ACA_HUMAN (Q06190) Serine/threonine-protein phosphatase 2A 72/1... | 29 | 8.7 |
|---|
>VC04_SWPVK (P32228) Protein C4| Length = 530 Score = 32.7 bits (73), Expect = 0.79 Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 7/59 (11%) Frame = +1 Query: 34 CAIRIWSLEGPDGWVVKHRLSM-------VDVFGRDMLLRTNSEGYWCFDYDIMAVDLE 189 C I+I S+E + + HRL + ++F D + + N E Y C DYDI+ + LE Sbjct: 18 CDIKIVSIEN-NKTISAHRLILSMYSKYFYNIFNSDFIDKNNDEIYICADYDILYIILE 75
>LEPA_BACHD (Q9KD76) GTP-binding protein lepA| Length = 609 Score = 30.4 bits (67), Expect = 3.9 Identities = 18/75 (24%), Positives = 39/75 (52%), Gaps = 4/75 (5%) Frame = +1 Query: 127 LRTNSEGYWCFDYDIMAV---DLERELVILDDKIADKIISVSMRTGKGSQFQKIPRRFTE 297 L++N++GY FDY+++ +L + ++L+ ++ D + + R + ++I + E Sbjct: 468 LKSNTKGYASFDYELIGYKPSNLVKMDILLNGEVVDALSVIVHRDSAYERGKQIVEKLKE 527 Query: 298 LY-RSLFHVPYYGKV 339 L R F VP + Sbjct: 528 LIPRQQFEVPVQASI 542
>LEPA_CLOAB (Q97JJ6) GTP-binding protein lepA| Length = 602 Score = 29.3 bits (64), Expect = 8.7 Identities = 17/75 (22%), Positives = 39/75 (52%), Gaps = 4/75 (5%) Frame = +1 Query: 127 LRTNSEGYWCFDYDI---MAVDLERELVILDDKIADKIISVSMRTGKGSQFQKIPRRFTE 297 L++ ++GY FDY++ M +L + +IL+ ++ D + + + ++ + + + E Sbjct: 465 LKSRTKGYASFDYELDGYMRTELVKLDIILNSEVVDALSMIVPKDRAYAKGRTMAEKLKE 524 Query: 298 LY-RSLFHVPYYGKV 339 + R LF +P V Sbjct: 525 IIPRQLFEIPIQAAV 539
>2ACA_HUMAN (Q06190) Serine/threonine-protein phosphatase 2A 72/130 kDa| regulatory subunit B (PP2A, subunit B, B''-PR72/PR130) (PP2A, subunit B, B72/B130 isoforms) (PP2A, subunit B, PR72/PR130 isoforms) (PP2A, subunit B, R3 isoform) Length = 1150 Score = 29.3 bits (64), Expect = 8.7 Identities = 12/31 (38%), Positives = 19/31 (61%) Frame = -3 Query: 572 LQLSKVSEHSLIIVDRSKRQVLHTITRTAHT 480 L +S V+ +S +++DR Q +H T T HT Sbjct: 7 LVVSTVNHYSSVVIDRRFEQAIHYCTGTCHT 37 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 85,371,225 Number of Sequences: 219361 Number of extensions: 1720310 Number of successful extensions: 3534 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 3463 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3534 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 5044307840 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)