Clone Information

BLAST Search Result

Clone Name	bags18g22
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	RL18A_ORYSA (Q943F3) 60S ribosomal protein L18a	340	2e-93
2	RL18A_ARATH (P51418) 60S ribosomal protein L18a-1	332	6e-91
3	RL18B_ARATH (Q9LUD4) 60S ribosomal protein L18a-2	328	9e-90
4	RL18A_CASSA (Q9ATF5) 60S ribosomal protein L18a	323	2e-88
5	RL18A_HUMAN (Q02543) 60S ribosomal protein L18a	185	1e-46
6	RL18A_RAT (P62718) 60S ribosomal protein L18a	184	2e-46
7	RL18A_MOUSE (P62717) 60S ribosomal protein L18a	184	2e-46
8	RL18A_BRARE (Q7ZWJ4) 60S ribosomal protein L18a	180	3e-45
9	RL18A_CAEEL (O44480) 60S ribosomal protein L18a	179	5e-45
10	RL18A_SPOFR (Q8WQI7) 60S ribosomal protein L18a	178	1e-44
11	RL18A_DROME (P41093) 60S ribosomal protein L18a	175	9e-44
12	RL18A_ICTPU (Q90YU9) 60S ribosomal protein L18a	175	1e-43
13	RL20_YEAST (P47913) 60S ribosomal protein L20 (L18A)	169	5e-42
14	RL18A_SALSA (O57561) 60S ribosomal protein L18a	167	2e-41
15	RL20_SCHPO (P05732) 60S ribosomal protein L20 (YL17)	165	1e-40
16	PRP5_USTMA (Q4PFD9) Pre-mRNA-processing ATP-dependent RNA helica...	37	0.067
17	INVO_SAGOE (P24712) Involucrin	36	0.088
18	PQE1_CAEEL (Q10124) Putative RNA exonuclease pqe-1 (PolyQ enhanc...	36	0.088
19	IF4G1_HUMAN (Q04637) Eukaryotic translation initiation factor 4 ...	35	0.20
20	DHH1_CRYNE (Q5KJI2) ATP-dependent RNA helicase DHH1 (EC 3.6.1.-)	34	0.43
21	G6PI_MOUSE (P06745) Glucose-6-phosphate isomerase (EC 5.3.1.9) (...	33	0.57
22	WDR43_HUMAN (Q15061) WD-repeat protein 43	33	0.57
23	VID21_NEUCR (Q7SBU6) Chromatin modification-related protein vid-21	33	0.57
24	INVO_AOTTR (P24708) Involucrin	33	0.74
25	GBF_DICDI (P36417) G-box-binding factor (GBF)	33	0.74
26	CAC1B_HUMAN (Q00975) Voltage-dependent N-type calcium channel al...	32	1.3
27	ZBT7B_HUMAN (O15156) Zinc finger and BTB domain-containing prote...	32	1.3
28	GP73_MOUSE (Q91XA2) Golgi phosphoprotein 2 (Golgi membrane prote...	32	1.7
29	BAZ2A_HUMAN (Q9UIF9) Bromodomain adjacent to zinc finger domain ...	32	2.2
30	INVO_HUMAN (P07476) Involucrin	31	2.8
31	IL2RA_BOVIN (P12342) Interleukin-2 receptor alpha chain precurso...	31	2.8
32	CCR4_YEAST (P31384) Glucose-repressible alcohol dehydrogenase tr...	31	3.7
33	AGO2_DROME (Q9VUQ5) Argonaute 2 protein	31	3.7
34	TDRD7_MOUSE (Q8K1H1) Tudor domain-containing protein 7 (Tudor re...	28	4.5
35	HIS6_BLOPB (Q494D6) Imidazole glycerol phosphate synthase subuni...	30	4.8
36	GLT_DROME (P33438) Glutactin precursor	30	4.8
37	CYSP_PLAFA (P25805) Trophozoite cysteine proteinase precursor (E...	30	4.8
38	RLX_METMP (Q6M157) 50S ribosomal protein LX	30	6.3
39	IF4G1_RABIT (P41110) Eukaryotic translation initiation factor 4 ...	30	6.3
40	NCOR1_MOUSE (Q60974) Nuclear receptor corepressor 1 (N-CoR1) (N-...	30	6.3
41	INVO_PONPY (P14708) Involucrin	30	6.3
42	RP1L1_HUMAN (Q8IWN7) Retinitis pigmentosa 1-like 1 protein	30	6.3
43	FTSK_SALTI (Q8Z814) DNA translocase ftsK	30	6.3
44	FTSK_SALTY (Q8ZQD5) DNA translocase ftsK	30	6.3
45	PRSA2_LACJO (P60810) Foldase protein prsA 2 precursor (EC 5.2.1.8)	30	6.3
46	MUTL_BUCAI (P57633) DNA mismatch repair protein mutL	30	8.2
47	FTSK_SHIFL (Q83S00) DNA translocase ftsK	30	8.2
48	FTSK_ECO57 (Q8X5H9) DNA translocase ftsK	30	8.2
49	PRG4_MOUSE (Q9JM99) Proteoglycan-4 precursor (Lubricin) (Megakar...	30	8.2
50	CNOT3_HUMAN (O75175) CCR4-NOT transcription complex subunit 3 (C...	30	8.2
51	ARID2_HUMAN (Q68CP9) AT-rich interactive domain-containing prote...	30	8.2
52	FTSK_ECOLI (P46889) DNA translocase ftsK	30	8.2
53	FTSK_ECOL6 (Q8FJC7) DNA translocase ftsK	30	8.2
54	ELOA1_RAT (Q63187) Transcription elongation factor B polypeptide...	30	8.2

>RL18A_ORYSA (Q943F3) 60S ribosomal protein L18a|
          Length = 178

 Score =  340 bits (873), Expect = 2e-93
 Identities = 163/178 (91%), Positives = 168/178 (94%)
 Frame = +2

Query: 38  MVAHRFHQYQVVGRALPTPGDEQPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKANGQM 217
           M A RFHQYQVVGR LPTP DE PKIYRMKLWATNEVRAKSKFWYFLRKLKKVKK+NGQ+
Sbjct: 1   MGAFRFHQYQVVGRGLPTPTDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQI 60

Query: 218 LAINEIFEKNPTTIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGGVEQMYTEMASRHRVRS 397
           LAINEIFEKNPTTIKNYGIWLRYQSRTGYHNMYKEYRDTTLNG VEQMYTEMASRHRVR 
Sbjct: 61  LAINEIFEKNPTTIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRF 120

Query: 398 PCIQIIKTATVDFKLCKRDNTKQFHNSKIKFPLVYQKVRPPTRKLKTTYKATRPNLFM 571
           PCIQIIKTATV FKLCKRDNTKQFH S IKFPLVY+KVRPPTRKLKTT+KA+RPNLFM
Sbjct: 121 PCIQIIKTATVHFKLCKRDNTKQFHKSDIKFPLVYRKVRPPTRKLKTTFKASRPNLFM 178

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>RL18A_ARATH (P51418) 60S ribosomal protein L18a-1|
          Length = 178

 Score =  332 bits (851), Expect = 6e-91
 Identities = 159/178 (89%), Positives = 168/178 (94%)
 Frame = +2

Query: 38  MVAHRFHQYQVVGRALPTPGDEQPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKANGQM 217
           M A RFHQYQVVGRALPT  D QPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKK+NGQM
Sbjct: 1   MGAFRFHQYQVVGRALPTEKDVQPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQM 60

Query: 218 LAINEIFEKNPTTIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGGVEQMYTEMASRHRVRS 397
           LAINEI+EKNPTTIKN+GIWLRYQSRTGYHNMYKEYRDTTLNG VEQMYTEMASRHRVR 
Sbjct: 61  LAINEIYEKNPTTIKNFGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRF 120

Query: 398 PCIQIIKTATVDFKLCKRDNTKQFHNSKIKFPLVYQKVRPPTRKLKTTYKATRPNLFM 571
           PCIQIIKTATV  KLCKR++TKQFHNSKIKFPLV++KVRPP+RKLKTTYKA +PNLFM
Sbjct: 121 PCIQIIKTATVPAKLCKRESTKQFHNSKIKFPLVFRKVRPPSRKLKTTYKANKPNLFM 178

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>RL18B_ARATH (Q9LUD4) 60S ribosomal protein L18a-2|
          Length = 178

 Score =  328 bits (841), Expect = 9e-90
 Identities = 157/178 (88%), Positives = 165/178 (92%)
 Frame = +2

Query: 38  MVAHRFHQYQVVGRALPTPGDEQPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKANGQM 217
           M   RFHQYQVVGRALPT  DE PKIYRMKLW  NEV AKSKFWYF+RKLKKVKK+NGQM
Sbjct: 1   MGGFRFHQYQVVGRALPTENDEHPKIYRMKLWGRNEVCAKSKFWYFMRKLKKVKKSNGQM 60

Query: 218 LAINEIFEKNPTTIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGGVEQMYTEMASRHRVRS 397
           LAINEIFEKNPTTIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGGVEQMYTEMASRHRVR 
Sbjct: 61  LAINEIFEKNPTTIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGGVEQMYTEMASRHRVRF 120

Query: 398 PCIQIIKTATVDFKLCKRDNTKQFHNSKIKFPLVYQKVRPPTRKLKTTYKATRPNLFM 571
           PCIQIIKTATV  KLCKR+ TKQFHNSKIKFPLV++KVRPP+RKLKTTYKA++PNLFM
Sbjct: 121 PCIQIIKTATVPAKLCKREITKQFHNSKIKFPLVFRKVRPPSRKLKTTYKASKPNLFM 178

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>RL18A_CASSA (Q9ATF5) 60S ribosomal protein L18a|
          Length = 178

 Score =  323 bits (829), Expect = 2e-88
 Identities = 154/178 (86%), Positives = 164/178 (92%)
 Frame = +2

Query: 38  MVAHRFHQYQVVGRALPTPGDEQPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKANGQM 217
           MV  RFHQYQVVGR LP+  DE PKIYRMKLWATNEVRAKSKFWYFLRKLKKVKK+NGQM
Sbjct: 1   MVTFRFHQYQVVGRGLPSETDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQM 60

Query: 218 LAINEIFEKNPTTIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGGVEQMYTEMASRHRVRS 397
           LAINEIFEKNPT IKNYGIWLRYQSRTGYHNMYKEYRDTTLNG VEQMY EMASRHRVR 
Sbjct: 61  LAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYIEMASRHRVRF 120

Query: 398 PCIQIIKTATVDFKLCKRDNTKQFHNSKIKFPLVYQKVRPPTRKLKTTYKATRPNLFM 571
           PCIQIIKTAT+  KLCKR+++KQFHNSKIKFPLV +K+RPP+RKLKT YKA+RPNLFM
Sbjct: 121 PCIQIIKTATIPAKLCKRESSKQFHNSKIKFPLVTRKIRPPSRKLKTHYKASRPNLFM 178

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>RL18A_HUMAN (Q02543) 60S ribosomal protein L18a|
          Length = 176

 Score =  185 bits (469), Expect = 1e-46
 Identities = 86/170 (50%), Positives = 120/170 (70%)
 Frame = +2

Query: 59  QYQVVGRALPTPGDEQPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKANGQMLAINEIF 238
           +Y+VVGR LPTP    P +YRM+++A N V AKS+FWYF+ +LKK+KK++G+++   ++F
Sbjct: 9   EYKVVGRCLPTPKCHTPPLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGEIVYCGQVF 68

Query: 239 EKNPTTIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGGVEQMYTEMASRHRVRSPCIQIIK 418
           EK+P  +KN+GIWLRY SR+G HNMY+EYRD T  G V Q Y +M +RHR R+  IQI+K
Sbjct: 69  EKSPLRVKNFGIWLRYDSRSGTHNMYREYRDLTTAGAVTQCYRDMGARHRARAHSIQIMK 128

Query: 419 TATVDFKLCKRDNTKQFHNSKIKFPLVYQKVRPPTRKLKTTYKATRPNLF 568
              +    C+R   KQFH+SKIKFPL ++ +R   R+ K  +   RPN F
Sbjct: 129 VEEIAASKCRRPAVKQFHDSKIKFPLPHRVLR---RQHKPRFTTKRPNTF 175

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>RL18A_RAT (P62718) 60S ribosomal protein L18a|
          Length = 176

 Score =  184 bits (467), Expect = 2e-46
 Identities = 86/170 (50%), Positives = 120/170 (70%)
 Frame = +2

Query: 59  QYQVVGRALPTPGDEQPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKANGQMLAINEIF 238
           +Y+VVGR LPTP    P +YRM+++A N V AKS+FWYF+ +LKK+KK++G+++   ++F
Sbjct: 9   EYKVVGRCLPTPKCHTPPLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGEIVYCGQVF 68

Query: 239 EKNPTTIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGGVEQMYTEMASRHRVRSPCIQIIK 418
           EK+P  +KN+GIWLRY SR+G HNMY+EYRD T  G V Q Y +M +RHR R+  IQI+K
Sbjct: 69  EKSPLRVKNFGIWLRYDSRSGTHNMYREYRDLTTAGAVTQCYRDMGARHRARAHSIQIMK 128

Query: 419 TATVDFKLCKRDNTKQFHNSKIKFPLVYQKVRPPTRKLKTTYKATRPNLF 568
              +    C+R   KQFH+SKIKFPL ++ +R   R+ K  +   RPN F
Sbjct: 129 VEEIAAGKCRRPAVKQFHDSKIKFPLPHRVLR---RQHKPRFTTKRPNTF 175

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>RL18A_MOUSE (P62717) 60S ribosomal protein L18a|
          Length = 176

 Score =  184 bits (467), Expect = 2e-46
 Identities = 86/170 (50%), Positives = 120/170 (70%)
 Frame = +2

Query: 59  QYQVVGRALPTPGDEQPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKANGQMLAINEIF 238
           +Y+VVGR LPTP    P +YRM+++A N V AKS+FWYF+ +LKK+KK++G+++   ++F
Sbjct: 9   EYKVVGRCLPTPKCHTPPLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGEIVYCGQVF 68

Query: 239 EKNPTTIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGGVEQMYTEMASRHRVRSPCIQIIK 418
           EK+P  +KN+GIWLRY SR+G HNMY+EYRD T  G V Q Y +M +RHR R+  IQI+K
Sbjct: 69  EKSPLRVKNFGIWLRYDSRSGTHNMYREYRDLTTAGAVTQCYRDMGARHRARAHSIQIMK 128

Query: 419 TATVDFKLCKRDNTKQFHNSKIKFPLVYQKVRPPTRKLKTTYKATRPNLF 568
              +    C+R   KQFH+SKIKFPL ++ +R   R+ K  +   RPN F
Sbjct: 129 VEEIAAGKCRRPAVKQFHDSKIKFPLPHRVLR---RQHKPRFTTKRPNTF 175

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>RL18A_BRARE (Q7ZWJ4) 60S ribosomal protein L18a|
          Length = 176

 Score =  180 bits (457), Expect = 3e-45
 Identities = 84/170 (49%), Positives = 120/170 (70%)
 Frame = +2

Query: 59  QYQVVGRALPTPGDEQPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKANGQMLAINEIF 238
           +Y+VVGR LP+  +  P +YRM+++A N V AKS+FWYF+ +L+K+KKA+G+++    +F
Sbjct: 9   EYKVVGRLLPSVKNPAPPLYRMRIFAPNHVVAKSRFWYFVSQLRKMKKASGEIVYCGLVF 68

Query: 239 EKNPTTIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGGVEQMYTEMASRHRVRSPCIQIIK 418
           EK+P  +KN+GIWLRY SR+G HNMY+EYRD T +G V Q Y +M +RHR R+  IQI+K
Sbjct: 69  EKSPLKVKNFGIWLRYDSRSGTHNMYREYRDLTTSGAVTQCYRDMGARHRARAHAIQIMK 128

Query: 419 TATVDFKLCKRDNTKQFHNSKIKFPLVYQKVRPPTRKLKTTYKATRPNLF 568
              +    C+R   KQFH+SKIKFPL ++ +R   R+ K  +   RPN F
Sbjct: 129 VQVIAANKCRRPAIKQFHDSKIKFPLPHRVLR---RQHKPRFTTKRPNTF 175

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>RL18A_CAEEL (O44480) 60S ribosomal protein L18a|
          Length = 180

 Score =  179 bits (455), Expect = 5e-45
 Identities = 84/176 (47%), Positives = 122/176 (69%)
 Frame = +2

Query: 35  RMVAHRFHQYQVVGRALPTPGDEQPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKANGQ 214
           + +    ++Y VVGR +PT  +    I++M+++ATN V AKS+FWYF+  L++VKKANG+
Sbjct: 4   KALGETLNEYVVVGRKIPTEKEPVTPIWKMQIFATNHVIAKSRFWYFVSMLRRVKKANGE 63

Query: 215 MLAINEIFEKNPTTIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGGVEQMYTEMASRHRVR 394
           +L+I ++FEKNP T+KNYG+WL+Y SRTG+HNMY+EYRDTT+ G V Q Y +M +RHR +
Sbjct: 64  ILSIKQVFEKNPGTVKNYGVWLKYDSRTGHHNMYREYRDTTVAGAVTQCYRDMGARHRAQ 123

Query: 395 SPCIQIIKTATVDFKLCKRDNTKQFHNSKIKFPLVYQKVRPPTRKLKTTYKATRPN 562
           +  I I+K  TV  +  KR   K FH++KI+FPL +   R   RK  + +   R N
Sbjct: 124 ADRIHILKVQTVKAEDTKRAGIKMFHDAKIRFPLPH---RVTKRKNLSVFTTARQN 176

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>RL18A_SPOFR (Q8WQI7) 60S ribosomal protein L18a|
          Length = 177

 Score =  178 bits (451), Expect = 1e-44
 Identities = 81/170 (47%), Positives = 118/170 (69%)
 Frame = +2

Query: 59  QYQVVGRALPTPGDEQPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKANGQMLAINEIF 238
           +Y+V+GR LP+  + +P +Y+M++++ +++ AKS+FWYFLR+LKK KK  G++++I EI 
Sbjct: 9   EYEVIGRKLPSESEPKPPLYKMRIFSPDQIVAKSRFWYFLRQLKKFKKTTGEIVSIREIP 68

Query: 239 EKNPTTIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGGVEQMYTEMASRHRVRSPCIQIIK 418
           EK+P  IKN+GIWLRY+SR+G HNMY+EYRD ++ G V Q Y +M +RHR R+  IQIIK
Sbjct: 69  EKSPVKIKNFGIWLRYESRSGVHNMYREYRDLSVGGAVTQCYRDMGARHRARAHSIQIIK 128

Query: 419 TATVDFKLCKRDNTKQFHNSKIKFPLVYQKVRPPTRKLKTTYKATRPNLF 568
              +    C+R   KQFHNS I+FPL     R    K   T+   RP+ +
Sbjct: 129 VEVIKASACRRPQVKQFHNSTIRFPL---PKRVHHHKRLNTFAYKRPSTY 175

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>RL18A_DROME (P41093) 60S ribosomal protein L18a|
          Length = 177

 Score =  175 bits (444), Expect = 9e-44
 Identities = 80/158 (50%), Positives = 114/158 (72%)
 Frame = +2

Query: 59  QYQVVGRALPTPGDEQPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKANGQMLAINEIF 238
           +Y+VVGR LP+  + Q  +Y+M+++A + + AKS+FWYFLR+LKK KK  G++++I +++
Sbjct: 9   EYEVVGRKLPSEKEPQTPLYKMRIFAPDNIVAKSRFWYFLRQLKKFKKTTGEIVSIKQVY 68

Query: 239 EKNPTTIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGGVEQMYTEMASRHRVRSPCIQIIK 418
           E +P  IKN+GIWLRY SR+G HNMY+EYRD T+ G V Q Y +M +RHR R+  IQIIK
Sbjct: 69  ETSPVKIKNFGIWLRYDSRSGTHNMYREYRDLTVGGAVTQCYRDMGARHRARAHSIQIIK 128

Query: 419 TATVDFKLCKRDNTKQFHNSKIKFPLVYQKVRPPTRKL 532
             ++     +R + KQFH+SKIKFPLV +      RKL
Sbjct: 129 VDSIPAAKTRRVHVKQFHDSKIKFPLVQRVHHKGNRKL 166

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>RL18A_ICTPU (Q90YU9) 60S ribosomal protein L18a|
          Length = 176

 Score =  175 bits (443), Expect = 1e-43
 Identities = 82/170 (48%), Positives = 117/170 (68%)
 Frame = +2

Query: 59  QYQVVGRALPTPGDEQPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKANGQMLAINEIF 238
           +Y+VVGR LP+  +  P +YRM+++A N V AKS+FWYF+ +L+K+KKANG+ +    + 
Sbjct: 9   EYKVVGRLLPSAKNPTPPLYRMRIFAPNHVVAKSRFWYFVSQLRKMKKANGETVYCGLVH 68

Query: 239 EKNPTTIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGGVEQMYTEMASRHRVRSPCIQIIK 418
           E++P  +KN+GIWLRY SR+G HNMY+EYRD T +G V Q Y +M +RHR R+  IQI+K
Sbjct: 69  EQSPLKVKNFGIWLRYDSRSGTHNMYREYRDLTTSGAVTQCYRDMGARHRARAHAIQIMK 128

Query: 419 TATVDFKLCKRDNTKQFHNSKIKFPLVYQKVRPPTRKLKTTYKATRPNLF 568
              +    C+R   KQFH+SKIKFPL ++ +R   R+ K  +   RP  F
Sbjct: 129 VQVIAANKCRRAAIKQFHDSKIKFPLPHRVLR---RQHKPRFTTRRPQTF 175

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>RL20_YEAST (P47913) 60S ribosomal protein L20 (L18A)|
          Length = 174

 Score =  169 bits (429), Expect = 5e-42
 Identities = 84/177 (47%), Positives = 122/177 (68%), Gaps = 1/177 (0%)
 Frame = +2

Query: 41  VAHRFHQYQVVGRALPTPGDEQPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKANGQML 220
           +AH F +YQV+GR LPT    +PK++RM+++A+NEV AKS++WYFL+KL KVKKA+G+++
Sbjct: 3   LAH-FKEYQVIGRRLPTESVPEPKLFRMRIFASNEVIAKSRYWYFLQKLHKVKKASGEIV 61

Query: 221 AINEIFEKNPTTIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGGVEQMYTEMASRHRVRSP 400
           +IN+I E +PT +KN+G+W+RY SR+G HNMYKE RD +    VE +Y +MA+RHR R  
Sbjct: 62  SINQINEAHPTKVKNFGVWVRYDSRSGTHNMYKEIRDVSRVAAVETLYQDMAARHRARFR 121

Query: 401 CIQIIKTATVDFKL-CKRDNTKQFHNSKIKFPLVYQKVRPPTRKLKTTYKATRPNLF 568
            I I+K A ++     KR   KQF    +KFPL ++      +K   T+   RP+ F
Sbjct: 122 SIHILKVAEIEKTADVKRQYVKQFLTKDLKFPLPHR-----VQKSTKTFSYKRPSTF 173

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>RL18A_SALSA (O57561) 60S ribosomal protein L18a|
          Length = 176

 Score =  167 bits (424), Expect = 2e-41
 Identities = 79/170 (46%), Positives = 113/170 (66%)
 Frame = +2

Query: 59  QYQVVGRALPTPGDEQPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKANGQMLAINEIF 238
           +Y+VVGR LP+  +  P +YRM+++A N V AKS+FWYF+ +L+K+KKANG+ +    + 
Sbjct: 9   EYKVVGRLLPSVKNPTPPLYRMRIFAPNHVVAKSRFWYFVSQLRKMKKANGETVYCGLVH 68

Query: 239 EKNPTTIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGGVEQMYTEMASRHRVRSPCIQIIK 418
           EK P  +KN+G+WLR  SR+G HNMY+EYRD T +  V Q Y +M +RHR R+  I I+K
Sbjct: 69  EKTPLKVKNFGVWLRNDSRSGTHNMYREYRDLTTSAAVTQCYRDMGARHRARAHSIHIMK 128

Query: 419 TATVDFKLCKRDNTKQFHNSKIKFPLVYQKVRPPTRKLKTTYKATRPNLF 568
              +    C+R   KQFH+SKIKFPL ++ +R   R+    +   RPN F
Sbjct: 129 VQEIAANKCRRPAIKQFHDSKIKFPLPHRVLR---RQHNPRFTTKRPNTF 175

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>RL20_SCHPO (P05732) 60S ribosomal protein L20 (YL17)|
          Length = 175

 Score =  165 bits (417), Expect = 1e-40
 Identities = 83/171 (48%), Positives = 114/171 (66%), Gaps = 1/171 (0%)
 Frame = +2

Query: 59  QYQVVGRALPTPGDEQPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKANGQMLAINEIF 238
           +YQVVGR +PT  +  PK++RM+L+A NE  AKS++WYFL+ + KVKKA G+++AINEI 
Sbjct: 4   EYQVVGRKVPTEHEPVPKLFRMRLFAPNESVAKSRYWYFLKMINKVKKATGEIVAINEIS 63

Query: 239 EKNPTTIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGGVEQMYTEMASRHRVRSPCIQIIK 418
           E  P   K +GIW+RY SR+G HNMYKE+RDTT  G VE MY +MA+RHR R   I+I+K
Sbjct: 64  EPKPLKAKVFGIWIRYDSRSGTHNMYKEFRDTTRVGAVEAMYADMAARHRARFRSIRILK 123

Query: 419 TATVDFKL-CKRDNTKQFHNSKIKFPLVYQKVRPPTRKLKTTYKATRPNLF 568
              V+ K   +R+  KQ  N  +KFPL +++        K  +   RP+ F
Sbjct: 124 VVEVEKKEDVRRNYVKQLLNPHLKFPLPHRRTGVVGLAGKKVFAPHRPSTF 174

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>PRP5_USTMA (Q4PFD9) Pre-mRNA-processing ATP-dependent RNA helicase PRP5 (EC|
           3.6.1.-)
          Length = 1156

 Score = 36.6 bits (83), Expect = 0.067
 Identities = 29/106 (27%), Positives = 35/106 (33%)
 Frame = +1

Query: 202 GQRPDARHQRDL*EEPDHHQELRHLAALPEQDRLPQHVQGVPRHDSERRCGADVHGDGVA 381
           G   D RH RD   E D       + A P  D    HV+G PR    RR      G    
Sbjct: 69  GSGHDRRHDRDRNRERDRRDHDSPIEAAPSPDGRRFHVEGAPRQGGRRRWD---EGAPTP 125

Query: 382 APRAFPVHPDHQDCDGGLQAVQEGQHEAVPQLEDQVPAGVPEGAPP 519
              A PVH             +   +  +P      P G+  G PP
Sbjct: 126 PTAAAPVHVS--------DPTRSSLNTQLPSRPIVAPPGMAPGPPP 163

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>INVO_SAGOE (P24712) Involucrin|
          Length = 493

 Score = 36.2 bits (82), Expect = 0.088
 Identities = 42/161 (26%), Positives = 73/161 (45%), Gaps = 7/161 (4%)
 Frame = +1

Query: 112 DLPHEALGHQRG-PRQVQVLVLPEEAQEGEEGQRPDARHQRDL*EEPDHHQ-ELRHLAAL 285
           +LP +  G  +    Q + L LPE+    +EGQ      Q    E P+  + +L+HL   
Sbjct: 173 ELPEQQEGQLKNLEHQEKPLELPEQ----QEGQLKHLEQQEKPLELPEQQEGQLKHLEQQ 228

Query: 286 PEQDRLPQHVQGVPRHDSERRCGADVHGDGVAAPRAFPVHPDHQDCDGGLQAVQE-GQHE 462
             Q  LP+  +G P++  E+  G   H   +   +    H +H+  +G L+  ++ GQ +
Sbjct: 229 EGQSELPEQQRGQPKY-LEQEEGQLKH---LEEQKGQLKHLEHE--EGQLELPEQVGQPK 282

Query: 463 AVPQLEDQVPAGVPEGAPPHPQAQD----HLQGHKAQPLHV 573
            + QLE Q+          HP+ Q+    HL+  + Q  H+
Sbjct: 283 HLEQLEKQL---------EHPEQQEGQLKHLEEEEGQVKHL 314

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>PQE1_CAEEL (Q10124) Putative RNA exonuclease pqe-1 (PolyQ enhancer protein 1)|
          Length = 1647

 Score = 36.2 bits (82), Expect = 0.088
 Identities = 38/150 (25%), Positives = 54/150 (36%)
 Frame = +1

Query: 118 PHEALGHQRGPRQVQVLVLPEEAQEGEEGQRPDARHQRDL*EEPDHHQELRHLAALPEQD 297
           PH+ +   R P      ++ +    G  G  P +R  +     P H     H AA     
Sbjct: 216 PHQVIQQVRAPNIGASQMVQQAPSRGHTGAAPASRMAQQ--PVPLHQGVAPHQAAPQTIQ 273

Query: 298 RLPQHVQGVPRHDSERRCGADVHGDGVAAPRAFPVHPDHQDCDGGLQAVQEGQHEAVPQL 477
           + P   +G P +    +     +   V  P+   V P H      +     G H A PQ+
Sbjct: 274 QTP--ARGRPANAQLAQNAQQRNPQQVPMPQG--VAPHH------IPPQALGPHGAAPQM 323

Query: 478 EDQVPAGVPEGAPPHPQAQDHLQGHKAQPL 567
             Q PA  P GA  H Q   H   H+  PL
Sbjct: 324 TQQAPARGPSGAAQHAQ-NAHRMTHQQVPL 352

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>IF4G1_HUMAN (Q04637) Eukaryotic translation initiation factor 4 gamma 1|
           (eIF-4-gamma 1) (eIF-4G1) (eIF-4G 1) (p220)
          Length = 1600

 Score = 35.0 bits (79), Expect = 0.20
 Identities = 36/150 (24%), Positives = 59/150 (39%), Gaps = 9/150 (6%)
 Frame = +1

Query: 148 PRQVQVLVLPEEAQEGEEGQRPDARHQRDL*EEPDHHQELRHLAALPEQDRLPQHVQGVP 327
           P Q + +   EE +EGE G+  +A  ++                    ++ LP     +P
Sbjct: 451 PAQEEEMEEEEEEEEGEAGEAGEAESEKG------------------GEELLPPESTPIP 492

Query: 328 RHDSERRCGADVHGDGVAAP--RAFPVHPDHQDCDGGLQAVQEGQHEAVPQLEDQVPAGV 501
            + S+    A      V+ P  R      + ++  G L    +  + AVP++E+Q PAG 
Sbjct: 493 ANLSQNLEAAAATQVAVSVPKRRRKIKELNKKEAVGDLLDAFKEANPAVPEVENQPPAGS 552

Query: 502 ---PE----GAPPHPQAQDHLQGHKAQPLH 570
              PE    G PP P+  D     K   +H
Sbjct: 553 NPGPESEGSGVPPRPEEADETWDSKEDKIH 582

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>DHH1_CRYNE (Q5KJI2) ATP-dependent RNA helicase DHH1 (EC 3.6.1.-)|
          Length = 625

 Score = 33.9 bits (76), Expect = 0.43
 Identities = 38/145 (26%), Positives = 51/145 (35%), Gaps = 16/145 (11%)
 Frame = +1

Query: 205 QRPDARHQRDL*EEPDHHQELRHLAALPEQDRLPQHVQGVPRHDSERRCGADVHGDGVAA 384
           Q+P  R QR     P H    +  AA P Q +  Q  Q   +   ++      +G G   
Sbjct: 436 QQPQQR-QRQHPPVPSHQAAQQSPAAAPVQQQQQQQQQQQQQQQQQQPQYQQAYGQGPPQ 494

Query: 385 PRA-FPVHPDHQDCDGGL-----QAVQEGQHEA-------VPQLEDQVPAGVP---EGAP 516
           P+A F   P+       L     QA  + Q  A        P  + Q PA  P   +  P
Sbjct: 495 PQALFQQQPNSSPAPAPLPSYSQQAPTQAQGPAPVQSPPPAPSTQPQAPAQTPIQGQIPP 554

Query: 517 PHPQAQDHLQGHKAQPLHVSGSPLP 591
             P+AQ   Q    QP    G   P
Sbjct: 555 TQPRAQQQGQQQPGQPGQAQGQSQP 579

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>G6PI_MOUSE (P06745) Glucose-6-phosphate isomerase (EC 5.3.1.9) (GPI)|
           (Phosphoglucose isomerase) (PGI) (Phosphohexose
           isomerase) (PHI) (Neuroleukin) (NLK)
          Length = 557

 Score = 33.5 bits (75), Expect = 0.57
 Identities = 20/73 (27%), Positives = 35/73 (47%)
 Frame = +2

Query: 179 RKLKKVKKANGQMLAINEIFEKNPTTIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGGVEQ 358
           +KL +  +AN   L + E+FE +P    N+ + L     T + ++  +Y    +N  V Q
Sbjct: 10  QKLLEWHRANSANLKLRELFEADPERFNNFSLNL----NTNHGHILVDYSKNLVNKEVMQ 65

Query: 359 MYTEMASRHRVRS 397
           M  E+A    V +
Sbjct: 66  MLVELAKSRGVEA 78

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>WDR43_HUMAN (Q15061) WD-repeat protein 43|
          Length = 720

 Score = 33.5 bits (75), Expect = 0.57
 Identities = 22/56 (39%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
 Frame = +1

Query: 367 GDGVAAPRA-FPVHPDHQDCDGGLQAVQEGQHEAVPQLEDQVPAGVPEGAPPHPQA 531
           G+G A PRA  P H   + C G   A+  G   +   L    PAGVP    PH QA
Sbjct: 18  GEGAAPPRAGAPAHGRTRGCSGARAAMAAGGGGSCDPL---APAGVPCAFSPHSQA 70

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>VID21_NEUCR (Q7SBU6) Chromatin modification-related protein vid-21|
          Length = 2189

 Score = 33.5 bits (75), Expect = 0.57
 Identities = 42/148 (28%), Positives = 57/148 (38%), Gaps = 5/148 (3%)
 Frame = +1

Query: 142  RGPRQVQVLVLPEEAQEGEEGQRPDARHQRDL*EEPDHHQELRHL-----AALPEQDRLP 306
            + P QVQ    P+ AQ       P+++H +       H Q+ +H      A   +Q +  
Sbjct: 1853 QAPGQVQ----PQHAQHSRH--TPNSQHAQ-------HTQQAQHARNAQQAHHTQQVQQA 1899

Query: 307  QHVQGVPRHDSERRCGADVHGDGVAAPRAFPVHPDHQDCDGGLQAVQEGQHEAVPQLEDQ 486
            QHVQ       +R     VHG+G        +H  HQ      Q  Q  Q +   Q   Q
Sbjct: 1900 QHVQQPQGLQGQRH--GQVHGNGQQ------LHQQHQH-----QQQQPQQAQQTQQQRQQ 1946

Query: 487  VPAGVPEGAPPHPQAQDHLQGHKAQPLH 570
            V       AP  PQAQ     H+AQ  H
Sbjct: 1947 V-----HPAPQLPQAQPPQHSHQAQAQH 1969

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>INVO_AOTTR (P24708) Involucrin|
          Length = 544

 Score = 33.1 bits (74), Expect = 0.74
 Identities = 31/117 (26%), Positives = 47/117 (40%), Gaps = 1/117 (0%)
 Frame = +1

Query: 181 EAQEGEEGQRPDARHQRDL*EEPDHHQ-ELRHLAALPEQDRLPQHVQGVPRHDSERRCGA 357
           E  E + GQ      +    E P+  + +L+HL     Q  LP+ V G P+H  ++    
Sbjct: 413 ELPEQQVGQSKHLEQEEKQLEHPEQQEGQLKHLGKQEAQLELPEQV-GQPKHLEQQEKQL 471

Query: 358 DVHGDGVAAPRAFPVHPDHQDCDGGLQAVQEGQHEAVPQLEDQVPAGVPEGAPPHPQ 528
           +              HP+ Q+     Q  QEGQ + + Q E Q+   V   AP   Q
Sbjct: 472 E--------------HPEQQEGQLKPQEQQEGQLKGLEQQERQLEQPVFAPAPGQVQ 514



 Score = 33.1 bits (74), Expect = 0.74
 Identities = 36/139 (25%), Positives = 57/139 (41%), Gaps = 11/139 (7%)
 Frame = +1

Query: 190 EGEEGQRPDARHQRDL*EEPDHHQELRHLAALPEQDRLPQHVQGVPRHDSERRCGADVHG 369
           E ++GQ     HQ    E P+   + +HL  L +Q   P+  +G  +   E+  G   H 
Sbjct: 257 EEQKGQLKHLEHQEGQLELPEQVGQPKHLEQLEKQLEHPEQQEGQLKQLEEQE-GQVKHL 315

Query: 370 D-------GVAAPRAFPVHPDHQDCDGGLQAVQEGQHEAVPQLEDQVPAGVPEGAPPHPQ 528
           +        +      P HP+  +        QEGQ   + QLE+Q      EG   H +
Sbjct: 316 EQQEEQLKHLEQQEGQPKHPEQLEKQLEHPEQQEGQ---LKQLEEQ------EGQVKHLE 366

Query: 529 AQD----HLQGHKAQPLHV 573
            Q+    HL+  + QP H+
Sbjct: 367 QQEEQLKHLEQQEGQPKHL 385



 Score = 32.3 bits (72), Expect = 1.3
 Identities = 36/140 (25%), Positives = 58/140 (41%), Gaps = 4/140 (2%)
 Frame = +1

Query: 154 QVQVLVLPEEAQEGEEGQRPDARHQRDL*EEPDHHQE----LRHLAALPEQDRLPQHVQG 321
           QV+ L   EE  +  E Q    +H   L ++ +H ++    L+HL    EQ  LP+   G
Sbjct: 361 QVKHLEQQEEQLKHLEQQEGQPKHLEQLEKQLEHLEQQEGQLKHLEQREEQLELPEQQVG 420

Query: 322 VPRHDSERRCGADVHGDGVAAPRAFPVHPDHQDCDGGLQAVQEGQHEAVPQLEDQVPAGV 501
             +H  +     +              HP+ Q+  G L+ +  G+ EA  +L +QV    
Sbjct: 421 QSKHLEQEEKQLE--------------HPEQQE--GQLKHL--GKQEAQLELPEQV---- 458

Query: 502 PEGAPPHPQAQDHLQGHKAQ 561
             G P H + Q+    H  Q
Sbjct: 459 --GQPKHLEQQEKQLEHPEQ 476



 Score = 32.3 bits (72), Expect = 1.3
 Identities = 42/170 (24%), Positives = 72/170 (42%), Gaps = 24/170 (14%)
 Frame = +1

Query: 133 GHQRGPRQVQVLVLPEEAQEG-------EEGQRPDARHQRDL*EEPDHHQ-ELRHLAALP 288
           GH   P Q +  +   E QEG       +EGQ      Q    +  +  + +++HL    
Sbjct: 171 GHLELPEQQEGQLKCLEQQEGHQELPEQQEGQLKHLEQQEGQLKHLEQQEGQVKHLEQQE 230

Query: 289 EQDRLPQHVQGVPRHDSERRCGADVHGDGVAAPRAFPVHPDHQDCDGGLQAVQE-GQHEA 465
           +Q  LP+  +G P++  E++ G   H   +   +    H +HQ  +G L+  ++ GQ + 
Sbjct: 231 KQSELPEQQRGQPKY-LEQQEGQLKH---LEEQKGQLKHLEHQ--EGQLELPEQVGQPKH 284

Query: 466 VPQLEDQV-----------PAGVPEGAPPHPQAQD----HLQGHKAQPLH 570
           + QLE Q+                EG   H + Q+    HL+  + QP H
Sbjct: 285 LEQLEKQLEHPEQQEGQLKQLEEQEGQVKHLEQQEEQLKHLEQQEGQPKH 334



 Score = 31.2 bits (69), Expect = 2.8
 Identities = 33/154 (21%), Positives = 63/154 (40%), Gaps = 6/154 (3%)
 Frame = +1

Query: 130 LGHQRGPRQVQVLV-LPEEAQEGEEGQRPDARHQRDL*EEPDHHQELRHLAALPEQDRLP 306
           L HQ G  ++   V  P+  ++ E+      + +  L +  +   +++HL    EQ +  
Sbjct: 266 LEHQEGQLELPEQVGQPKHLEQLEKQLEHPEQQEGQLKQLEEQEGQVKHLEQQEEQLKHL 325

Query: 307 QHVQGVPRHDSERRCGADVHGDGVAAPRAFPVHPDHQDCDGGLQAVQEGQHEAVPQLEDQ 486
           +  +G P+H  +     +              HP+ Q+        QEGQ + + Q E+Q
Sbjct: 326 EQQEGQPKHPEQLEKQLE--------------HPEQQEGQLKQLEEQEGQVKHLEQQEEQ 371

Query: 487 VP-AGVPEGAPPH----PQAQDHLQGHKAQPLHV 573
           +      EG P H     +  +HL+  + Q  H+
Sbjct: 372 LKHLEQQEGQPKHLEQLEKQLEHLEQQEGQLKHL 405

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>GBF_DICDI (P36417) G-box-binding factor (GBF)|
          Length = 708

 Score = 33.1 bits (74), Expect = 0.74
 Identities = 30/143 (20%), Positives = 53/143 (37%), Gaps = 4/143 (2%)
 Frame = +1

Query: 154 QVQVLVLPEEAQEGEEGQR-PDARHQRDL*EEPDHHQEL---RHLAALPEQDRLPQHVQG 321
           Q Q++ + ++AQ+ +  Q+    +H +   ++P HHQ++   +H   + +Q +  Q +Q 
Sbjct: 115 QYQLMFMQQQAQQNQPPQQNQQQQHHQQQQQQPQHHQQMQQQQHHQQMQQQQQHHQQMQQ 174

Query: 322 VPRHDSERRCGADVHGDGVAAPRAFPVHPDHQDCDGGLQAVQEGQHEAVPQLEDQVPAGV 501
              H   +      H               HQ      Q   + QH    Q + Q     
Sbjct: 175 QQHHQQMQHHQLQQH--------------QHQHQQQQQQQQHQQQHHQQQQQQQQ----- 215

Query: 502 PEGAPPHPQAQDHLQGHKAQPLH 570
                 H Q Q H Q  + Q  H
Sbjct: 216 -----QHHQQQQHHQHSQPQQQH 233

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>CAC1B_HUMAN (Q00975) Voltage-dependent N-type calcium channel alpha-1B subunit|
            (Voltage-gated calcium channel alpha subunit Cav2.2)
            (Calcium channel, L type, alpha-1 polypeptide isoform 5)
            (Brain calcium channel III) (BIII)
          Length = 2339

 Score = 32.3 bits (72), Expect = 1.3
 Identities = 36/128 (28%), Positives = 46/128 (35%), Gaps = 3/128 (2%)
 Frame = +1

Query: 196  EEGQRPDARHQRDL*EEPDHHQELRHLAALPEQDRLPQHVQGVPRHDSERRCGADVHGDG 375
            EE  RP   H ++    P+   E R     PE  R   H +G P   +ER          
Sbjct: 883  EERPRPHRSHSKEAAGPPEARSE-RGRGPGPEGGRR-HHRRGSPEEAAERE--------- 931

Query: 376  VAAPRAFPVHPDHQDCD---GGLQAVQEGQHEAVPQLEDQVPAGVPEGAPPHPQAQDHLQ 546
               PR    H  HQD      G +  +  +H   P+      AG  E       A+ H  
Sbjct: 932  ---PRRHRAHR-HQDPSKECAGAKGERRARHRGGPR------AGPREAESGEEPARRHRA 981

Query: 547  GHKAQPLH 570
             HKAQP H
Sbjct: 982  RHKAQPAH 989

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>ZBT7B_HUMAN (O15156) Zinc finger and BTB domain-containing protein 7B (Zinc|
           finger protein 67 homolog) (Zfp-67) (Zinc finger protein
           Th-POK) (T-helper-inducing POZ/Kruppel-like factor)
           (Kruppel-related zinc finger protein cKrox) (hcKrox)
           (Zinc finger and
          Length = 539

 Score = 32.3 bits (72), Expect = 1.3
 Identities = 25/76 (32%), Positives = 31/76 (40%), Gaps = 6/76 (7%)
 Frame = +1

Query: 349 CGADVHGDGVAAPRAFPVHPDHQDCDGG---LQAVQEGQHEAVPQLED---QVPAGVPEG 510
           C   + G G+ AP      PD  DC+     L+A        VP  ED   QVP   P  
Sbjct: 137 CMEILQGSGLEAPS-----PDEDDCERARQYLEAFATATASGVPNGEDSPPQVPLPPPPP 191

Query: 511 APPHPQAQDHLQGHKA 558
            PP P A+   +  KA
Sbjct: 192 PPPRPVARRSRKPRKA 207

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>GP73_MOUSE (Q91XA2) Golgi phosphoprotein 2 (Golgi membrane protein GP73)|
          Length = 393

 Score = 32.0 bits (71), Expect = 1.7
 Identities = 31/126 (24%), Positives = 52/126 (41%), Gaps = 16/126 (12%)
 Frame = +1

Query: 205 QRPDARHQRDL*EEPDHHQEL-----RHLAALPEQDRLPQHVQGVPRHDSE------RRC 351
           +R +A   RDL E  + HQ+      +    +P ++++PQ    VPR+ S+         
Sbjct: 180 KRNEAPGSRDLAETNNQHQQALKPQPKLQEEVPSEEQMPQEKGDVPRNKSQIPAPNSESL 239

Query: 352 GADVHGDGVAAPRAFPVHPDHQDCDGGLQAVQEGQHEAVPQLED--QVPAGV---PEGAP 516
           G               V  +HQ      QAV +G      +L+   Q+PAG+   PE   
Sbjct: 240 GLKPQVQNEETNEIQAVGEEHQQASIQGQAVADGTRVGAEKLDQHTQLPAGLLARPEEDS 299

Query: 517 PHPQAQ 534
            +P+ +
Sbjct: 300 QYPERE 305

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>BAZ2A_HUMAN (Q9UIF9) Bromodomain adjacent to zinc finger domain 2A (Transcription|
            termination factor I-interacting protein 5)
            (TTF-I-interacting protein 5) (Tip5) (hWALp3)
          Length = 1878

 Score = 31.6 bits (70), Expect = 2.2
 Identities = 21/52 (40%), Positives = 25/52 (48%)
 Frame = +1

Query: 433  LQAVQEGQHEAVPQLEDQVPAGVPEGAPPHPQAQDHLQGHKAQPLHVSGSPL 588
            L++   GQ    PQ + Q  A +   A P PQ Q  LQ HK   L   GSPL
Sbjct: 1178 LKSPVRGQDSEQPQAQLQPEAQLHAPAQPQPQLQLQLQSHKGF-LEQEGSPL 1228

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>INVO_HUMAN (P07476) Involucrin|
          Length = 585

 Score = 31.2 bits (69), Expect = 2.8
 Identities = 30/120 (25%), Positives = 48/120 (40%), Gaps = 1/120 (0%)
 Frame = +1

Query: 181 EAQEGEEGQRPDARHQRDL*EEPDHHQ-ELRHLAALPEQDRLPQHVQGVPRHDSERRCGA 357
           E  E + GQ  +   +    E P+  + +++HL     Q  LP+   G P+H  ++    
Sbjct: 451 EVPEQQVGQPKNLEQEEKQLELPEQQEGQVKHLEKQEAQLELPEQQVGQPKHLEQQEKHL 510

Query: 358 DVHGDGVAAPRAFPVHPDHQDCDGGLQAVQEGQHEAVPQLEDQVPAGVPEGAPPHPQAQD 537
           +              HP+ QD        QEGQ + + Q + Q+    P  AP   Q QD
Sbjct: 511 E--------------HPEQQDGQLKHLEQQEGQLKDLEQQKGQLEQ--PVFAPAPGQVQD 554

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>IL2RA_BOVIN (P12342) Interleukin-2 receptor alpha chain precursor (IL-2|
           receptor alpha subunit) (IL-2-RA) (IL2-RA) (p55) (TAC
           antigen) (CD25 antigen)
          Length = 275

 Score = 31.2 bits (69), Expect = 2.8
 Identities = 29/113 (25%), Positives = 41/113 (36%), Gaps = 29/113 (25%)
 Frame = +1

Query: 247 PDHHQELRHLAAL-----PEQDRLPQHVQGVPRHDSERR---------CGADVHGDGVAA 384
           P+ H+E +H  A      PE+  LP H +  P  + ER           G  VH      
Sbjct: 96  PEEHREKKHTDAQNQTQPPEEADLPGHCEEPPPWEHEREPLKRVYHFTLGQTVHYQCAQG 155

Query: 385 PRAFPVHPDHQDC----------DGGLQAVQEGQH-----EAVPQLEDQVPAG 498
            RA    P    C             L+ ++EG+H     +A PQ   + P G
Sbjct: 156 FRALQTSPAESTCMMINGELRWTRPRLKCIREGEHGQASDDAEPQESTEAPPG 208

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>CCR4_YEAST (P31384) Glucose-repressible alcohol dehydrogenase transcriptional|
           effector (EC 3.1.-.-) (Cytoplasmic deadenylase) (Carbon
           catabolite repressor protein 4)
          Length = 837

 Score = 30.8 bits (68), Expect = 3.7
 Identities = 17/45 (37%), Positives = 22/45 (48%), Gaps = 3/45 (6%)
 Frame = +1

Query: 436 QAVQEGQHEAVPQLEDQVPAGV---PEGAPPHPQAQDHLQGHKAQ 561
           Q  Q+ Q +A  Q + QVP      P+ APP  Q  D  Q H A+
Sbjct: 190 QQAQQAQQQAQQQAQQQVPGPFGPGPQAAPPALQPTDFQQSHIAE 234

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>AGO2_DROME (Q9VUQ5) Argonaute 2 protein|
          Length = 1214

 Score = 30.8 bits (68), Expect = 3.7
 Identities = 37/143 (25%), Positives = 49/143 (34%)
 Frame = +1

Query: 133 GHQRGPRQVQVLVLPEEAQEGEEGQRPDARHQRDL*EEPDHHQELRHLAALPEQDRLPQH 312
           GHQ+G           + QEG   QRP  + Q         HQ+ R       Q R P  
Sbjct: 167 GHQQG----------RQGQEGGYQQRPSGQQQGG-------HQQGRQGQEGGYQQRPPGQ 209

Query: 313 VQGVPRHDSERRCGADVHGDGVAAPRAFPVHPDHQDCDGGLQAVQEGQHEAVPQLEDQVP 492
            QG   H   R+     +    +  +        Q  +GG Q    GQ +   Q   Q  
Sbjct: 210 QQG--GHQQGRQGQEGGYQQRPSGQQQGGHQQGRQGQEGGYQQRPPGQQQGGHQQGRQGQ 267

Query: 493 AGVPEGAPPHPQAQDHLQGHKAQ 561
            G  +  PP  Q   H QG + Q
Sbjct: 268 EGGYQQRPPGQQQGGHEQGRQGQ 290

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>TDRD7_MOUSE (Q8K1H1) Tudor domain-containing protein 7 (Tudor repeat associator|
           with PCTAIRE 2) (Trap)
          Length = 1086

 Score = 27.7 bits (60), Expect(2) = 4.5
 Identities = 19/60 (31%), Positives = 26/60 (43%)
 Frame = +2

Query: 224 INEIFEKNPTTIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGGVEQMYTEMASRHRVRSPC 403
           I EI +K+     N GIW+     +   + YKE+    LN GV Q +        V  PC
Sbjct: 230 IKEILDKH-----NNGIWI-----SKLPHFYKEFYKEDLNQGVLQQFEHWPHICTVEKPC 279



 Score = 21.2 bits (43), Expect(2) = 4.5
 Identities = 13/46 (28%), Positives = 17/46 (36%)
 Frame = +1

Query: 421 CDGGLQAVQEGQHEAVPQLEDQVPAGVPEGAPPHPQAQDHLQGHKA 558
           C GG  ++        P   DQ P       PP P+ +   QG  A
Sbjct: 279 CGGGQDSLLYPARREQPLKSDQDPEKELPPPPPAPKQEVPSQGSPA 324

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>HIS6_BLOPB (Q494D6) Imidazole glycerol phosphate synthase subunit hisF (EC|
           4.1.3.-) (IGP synthase cyclase subunit) (IGP synthase
           subunit hisF) (ImGP synthase subunit hisF) (IGPS subunit
           hisF)
          Length = 258

 Score = 30.4 bits (67), Expect = 4.8
 Identities = 17/55 (30%), Positives = 29/55 (52%)
 Frame = +2

Query: 65  QVVGRALPTPGDEQPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKANGQMLAIN 229
           Q V  ++ T  + Q KIY++K +  +  RAK   W  L  +KKV++     + +N
Sbjct: 123 QCVVVSIDTWHNPQKKIYQVKCYTGDSTRAKITTWQTLDWVKKVQEYGAGEIVLN 177

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>GLT_DROME (P33438) Glutactin precursor|
          Length = 1026

 Score = 30.4 bits (67), Expect = 4.8
 Identities = 29/123 (23%), Positives = 49/123 (39%), Gaps = 1/123 (0%)
 Frame = +1

Query: 124  EALGHQRGPRQVQVLVLPEEAQEGEEGQRPDARHQRDL*EEPDHHQELRHLAAL-PEQDR 300
            E L  ++  +Q +   L  E ++ E  Q+   + +    E P + +  R L     E+DR
Sbjct: 822  EQLRREQQEQQEREYQLQLEREQQEREQQERGQQEPGPEEYPSYEEYSRALQEKNAERDR 881

Query: 301  LPQHVQGVPRHDSERRCGADVHGDGVAAPRAFPVHPDHQDCDGGLQAVQEGQHEAVPQLE 480
            +    Q   R   E     +      + P   P HP+++  DG     +E + E   Q  
Sbjct: 882  IYAEEQERERQQQETLLQENQQHPEQSLPEEQPTHPNYEAYDGDRSYAEEQERE--QQRR 939

Query: 481  DQV 489
            DQV
Sbjct: 940  DQV 942

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>CYSP_PLAFA (P25805) Trophozoite cysteine proteinase precursor (EC 3.4.22.-)|
           (TCP)
          Length = 569

 Score = 30.4 bits (67), Expect = 4.8
 Identities = 18/67 (26%), Positives = 33/67 (49%)
 Frame = +2

Query: 140 NEVRAKSKFWYFLRKLKKVKKANGQMLAINEIFEKNPTTIKNYGIWLRYQSRTGYHNMYK 319
           N ++  SKF+ F+++  KV K   + +   EIF+ N  +IKN+    +        N + 
Sbjct: 217 NNIKYASKFFKFMKEHNKVYKNIDEQMRKFEIFKINYISIKNHNKLNKNAMYKKKVNQFS 276

Query: 320 EYRDTTL 340
           +Y +  L
Sbjct: 277 DYSEEEL 283

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>RLX_METMP (Q6M157) 50S ribosomal protein LX|
          Length = 76

 Score = 30.0 bits (66), Expect = 6.3
 Identities = 12/38 (31%), Positives = 23/38 (60%)
 Frame = +2

Query: 317 KEYRDTTLNGGVEQMYTEMASRHRVRSPCIQIIKTATV 430
           KEY     N  +E MY+E+ S+H V+   I++++ + +
Sbjct: 22  KEYNVLKENDALETMYSEIGSKHAVKRANIKVVEISEI 59

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>IF4G1_RABIT (P41110) Eukaryotic translation initiation factor 4 gamma 1|
           (eIF-4-gamma 1) (eIF-4G1) (eIF-4G 1) (p220)
          Length = 1402

 Score = 30.0 bits (66), Expect = 6.3
 Identities = 35/138 (25%), Positives = 52/138 (37%), Gaps = 7/138 (5%)
 Frame = +1

Query: 178 EEAQEGEEGQRPDARHQRDL*EEPDHHQELRHLAALPEQDRLPQHVQGVPRHDSERRCGA 357
           EE +E EEG+   A       E     ++L    + P    LPQ+V+ V          A
Sbjct: 266 EEEEEEEEGEAGAA-------ESDKGGEDLHPTESTPVPGHLPQNVEAV---------AA 309

Query: 358 DVHGDGVAAPRAFPVHPDHQDCDGGLQAVQEGQHEAVPQLEDQVPAG---VPE----GAP 516
                 V   R      + ++  G L    +  + AVP++E+Q PAG    PE      P
Sbjct: 310 TQVAVSVPKRRRKIKELNKKEAVGDLLDAFKEVNPAVPEVENQPPAGNNPTPESEGSSGP 369

Query: 517 PHPQAQDHLQGHKAQPLH 570
             P+  D     K   +H
Sbjct: 370 SRPEEADETWDAKEDKIH 387

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>NCOR1_MOUSE (Q60974) Nuclear receptor corepressor 1 (N-CoR1) (N-CoR) (Retinoid|
           X receptor-interacting protein 13) (RIP13)
          Length = 2453

 Score = 30.0 bits (66), Expect = 6.3
 Identities = 27/93 (29%), Positives = 32/93 (34%), Gaps = 13/93 (13%)
 Frame = +1

Query: 334 DSERRCGADVHGDGVAAPRAFPVHPDHQDCDGGLQAVQEGQHEAVPQLE---DQVPAGVP 504
           DSE   GA+   D  +AP   PV       D    A   G  E V +LE   D  P   P
Sbjct: 724 DSE---GAENSSDTESAPSPSPVEAAKSSEDSSENAASRGNTEPVAELEATTDPAPCASP 780

Query: 505 EGAPP----------HPQAQDHLQGHKAQPLHV 573
             A P            Q  D      A+P+ V
Sbjct: 781 SSAVPTTKPAERESVEAQVTDSASAETAEPMDV 813

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>INVO_PONPY (P14708) Involucrin|
          Length = 835

 Score = 30.0 bits (66), Expect = 6.3
 Identities = 30/120 (25%), Positives = 47/120 (39%), Gaps = 1/120 (0%)
 Frame = +1

Query: 181  EAQEGEEGQRPDARHQRDL*EEPDHHQ-ELRHLAALPEQDRLPQHVQGVPRHDSERRCGA 357
            E  E + GQ      +    E P+  + +L+HL     Q  LP+   G P+H  ++    
Sbjct: 701  EVPEQQVGQPKHLEQEEKQLELPEQQEGQLKHLEKQEAQLELPEQQVGQPKHLEQQEKQL 760

Query: 358  DVHGDGVAAPRAFPVHPDHQDCDGGLQAVQEGQHEAVPQLEDQVPAGVPEGAPPHPQAQD 537
            +              HP+ +D        QEGQ + + Q + Q+    P  AP   Q QD
Sbjct: 761  E--------------HPEQKDGQLKHLEQQEGQLKNLEQQKGQLEQ--PVFAPAPGQVQD 804

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>RP1L1_HUMAN (Q8IWN7) Retinitis pigmentosa 1-like 1 protein|
          Length = 2480

 Score = 30.0 bits (66), Expect = 6.3
 Identities = 36/149 (24%), Positives = 61/149 (40%), Gaps = 2/149 (1%)
 Frame = +1

Query: 124  EALGHQRGPRQVQVLVLPEEAQEGEEG-QRPDARHQRDL*EEPDHHQELRHLAALPEQDR 300
            EA G  +    ++      EAQ   EG + P+A        E +   E   + A   +  
Sbjct: 2185 EAEGEAQKAEGIEAPETEGEAQPESEGIEAPEA--------EGEAQPESEGVEAQDAEGE 2236

Query: 301  LPQHVQGVPRHDSERRCGADVHGDGVAAPRAFPVHPDHQDCDGGLQAVQEGQHEAVPQLE 480
                 +G+   ++E+    ++  +GV AP A     + Q    G++A  E + EA P+LE
Sbjct: 2237 AQPESEGIEAQEAEKEAQPEL--EGVEAPEA---EGEAQPESEGIEA-PEAEGEAQPELE 2290

Query: 481  DQVPAGVPEGAPPHPQAQDHLQGH-KAQP 564
                    E A P P+  +  +   +AQP
Sbjct: 2291 GVEAPEAEEEAQPEPEGVETPEAEGEAQP 2319

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>FTSK_SALTI (Q8Z814) DNA translocase ftsK|
          Length = 1343

 Score = 30.0 bits (66), Expect = 6.3
 Identities = 19/53 (35%), Positives = 24/53 (45%), Gaps = 3/53 (5%)
 Frame = +1

Query: 436 QAVQEGQHEAVPQLEDQVPAGVPEGAPPHPQAQDHLQGHKA---QPLHVSGSP 585
           Q   E Q    PQ  + V A  PEG  PHPQ     +   A   QP+ V+ +P
Sbjct: 353 QPTVEWQPVPGPQTGEPVIAPAPEGYQPHPQYAQPQEAQSAPWQQPVPVASAP 405

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>FTSK_SALTY (Q8ZQD5) DNA translocase ftsK|
          Length = 1351

 Score = 30.0 bits (66), Expect = 6.3
 Identities = 19/53 (35%), Positives = 24/53 (45%), Gaps = 3/53 (5%)
 Frame = +1

Query: 436 QAVQEGQHEAVPQLEDQVPAGVPEGAPPHPQAQDHLQGHKA---QPLHVSGSP 585
           Q   E Q    PQ  + V A  PEG  PHPQ     +   A   QP+ V+ +P
Sbjct: 353 QPTVEWQPVPGPQTGEPVIAPAPEGYQPHPQYAQPQEAQSAPWQQPVPVASAP 405

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>PRSA2_LACJO (P60810) Foldase protein prsA 2 precursor (EC 5.2.1.8)|
          Length = 298

 Score = 30.0 bits (66), Expect = 6.3
 Identities = 26/95 (27%), Positives = 43/95 (45%), Gaps = 12/95 (12%)
 Frame = +2

Query: 149 RAKSKFWYFLRKLKKVKKANGQMLAINEIF------EKNPTTIKNYGIWLRYQSRTGYHN 310
           R  S+F  FL++    KK+  QM+ +N +       +  PTT +    W  YQ +    +
Sbjct: 89  RYGSQFDSFLKENSYTKKSFKQMIELNHLSKIALKKQMKPTTSQLKEEWKDYQPKITVQH 148

Query: 311 MYKEYRDTT------LNGGVEQMYTEMASRHRVRS 397
           +    RDT       LN G  + +  +AS++ V S
Sbjct: 149 ISTTSRDTANTVIEKLNNG--ESFASLASKYSVDS 181

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>MUTL_BUCAI (P57633) DNA mismatch repair protein mutL|
          Length = 584

 Score = 29.6 bits (65), Expect = 8.2
 Identities = 17/81 (20%), Positives = 35/81 (43%)
 Frame = +2

Query: 302 YHNMYKEYRDTTLNGGVEQMYTEMASRHRVRSPCIQIIKTATVDFKLCKRDNTKQFHNSK 481
           Y N    Y +  +N  V   Y+++  +  +       I++  +D  +    N  +FHN  
Sbjct: 257 YVNNRYLYNNIFVNA-VRAAYSKIEQKKNISFVLYLTIESFNIDINIHPTKNEIKFHNPD 315

Query: 482 IKFPLVYQKVRPPTRKLKTTY 544
           + +  +Y+ V    +K+K  Y
Sbjct: 316 VVYTFIYEAVFSYLKKIKEKY 336

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>FTSK_SHIFL (Q83S00) DNA translocase ftsK|
          Length = 1342

 Score = 29.6 bits (65), Expect = 8.2
 Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
 Frame = -1

Query: 504 WY-TSGNLIFELWNCFVLSLLHSLKSTVAVLMIWMHG 397
           WY  SG +I  L +  +  LLHS   T+A+L +W  G
Sbjct: 138 WYFASGGVIGSLLSTTLQPLLHSSGGTIALLCVWAAG 174

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>FTSK_ECO57 (Q8X5H9) DNA translocase ftsK|
          Length = 1342

 Score = 29.6 bits (65), Expect = 8.2
 Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
 Frame = -1

Query: 504 WY-TSGNLIFELWNCFVLSLLHSLKSTVAVLMIWMHG 397
           WY  SG +I  L +  +  LLHS   T+A+L +W  G
Sbjct: 138 WYFASGGVIGSLLSTTLQPLLHSSGGTIALLCVWAAG 174

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>PRG4_MOUSE (Q9JM99) Proteoglycan-4 precursor (Lubricin) (Megakaryocyte|
           stimulating factor) (Superficial zone proteoglycan)
           [Contains: Proteoglycan-4 C-terminal part]
          Length = 1054

 Score = 29.6 bits (65), Expect = 8.2
 Identities = 14/40 (35%), Positives = 19/40 (47%)
 Frame = +1

Query: 385 PRAFPVHPDHQDCDGGLQAVQEGQHEAVPQLEDQVPAGVP 504
           P    V+PDH+D DGG     EG+   +P      P  +P
Sbjct: 735 PETAEVNPDHEDADGG-----EGEKPLIPGPPVLFPTAIP 769

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>CNOT3_HUMAN (O75175) CCR4-NOT transcription complex subunit 3 (CCR4-associated|
           factor 3)
          Length = 753

 Score = 29.6 bits (65), Expect = 8.2
 Identities = 26/102 (25%), Positives = 32/102 (31%), Gaps = 13/102 (12%)
 Frame = +1

Query: 325 PRHDSERRCGADVHGDGVAAPRAFPVHPDHQDCDGGLQAVQEGQHEAVPQLEDQVPAGVP 504
           P   S   C  +   D     R+            G + V   QH   P +    P+G P
Sbjct: 269 PIPPSPANCTTENSEDDKKRGRSTDSEVSQSPAKNGSKPVHSNQHPQSPAVPPTYPSGPP 328

Query: 505 EGAP-----------PHPQAQDHLQGHKAQPL--HVSGSPLP 591
             A            P P A     G KA P   H SG+P P
Sbjct: 329 PAASALSTTPGNNGVPAPAAPPSALGPKASPAPSHNSGTPAP 370

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>ARID2_HUMAN (Q68CP9) AT-rich interactive domain-containing protein 2 (ARID|
            domain-containing protein 2) (BRG1-associated factor 200)
            (BAF200)
          Length = 1835

 Score = 29.6 bits (65), Expect = 8.2
 Identities = 18/51 (35%), Positives = 24/51 (47%)
 Frame = +1

Query: 439  AVQEGQHEAVPQLEDQVPAGVPEGAPPHPQAQDHLQGHKAQPLHVSGSPLP 591
            AVQ+ Q      +++ VP   P   PP P  Q   Q + +QP   SGS  P
Sbjct: 1573 AVQQKQQHPPTYVQNVVPQNTP--MPPSPAVQVQGQPNSSQPSPFSGSSQP 1621

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>FTSK_ECOLI (P46889) DNA translocase ftsK|
          Length = 1329

 Score = 29.6 bits (65), Expect = 8.2
 Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
 Frame = -1

Query: 504 WY-TSGNLIFELWNCFVLSLLHSLKSTVAVLMIWMHG 397
           WY  SG +I  L +  +  LLHS   T+A+L +W  G
Sbjct: 138 WYFASGGVIGSLLSTTLQPLLHSSGGTIALLCVWAAG 174

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>FTSK_ECOL6 (Q8FJC7) DNA translocase ftsK|
          Length = 1347

 Score = 29.6 bits (65), Expect = 8.2
 Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
 Frame = -1

Query: 504 WY-TSGNLIFELWNCFVLSLLHSLKSTVAVLMIWMHG 397
           WY  SG +I  L +  +  LLHS   T+A+L +W  G
Sbjct: 138 WYFASGGVIGSLLSTTLQPLLHSSGGTIALLCVWAAG 174

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>ELOA1_RAT (Q63187) Transcription elongation factor B polypeptide 3 (RNA|
           polymerase II transcription factor SIII subunit A) (SIII
           p110) (Elongin A) (EloA) (Elongin 110 kDa subunit)
          Length = 773

 Score = 29.6 bits (65), Expect = 8.2
 Identities = 21/82 (25%), Positives = 34/82 (41%)
 Frame = +1

Query: 106 AQDLPHEALGHQRGPRQVQVLVLPEEAQEGEEGQRPDARHQRDL*EEPDHHQELRHLAAL 285
           A+D   E    ++ PR V     P++ +E E   +   +        P+H Q+      L
Sbjct: 84  AEDQDFEKSNSRKRPRDV-----PQQEEEAEGNYQESWQASGSQPYSPEHRQKKHR--KL 136

Query: 286 PEQDRLPQHVQGVPRHDSERRC 351
           PE +R  +   G  R D  +RC
Sbjct: 137 PELERPHKVAHGHERRDERKRC 158


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 84,674,778
Number of Sequences: 219361
Number of extensions: 1746231
Number of successful extensions: 7132
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 6539
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7081
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6200242422
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result