Clone Name	bags18g20
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	gb|AF265294.1|AF265294 Triticum aestivum violaxanthin de-epoxida...	967	0.0
2	gb|AY672650.1| Hordeum vulgare violaxanthin de-epoxidase (VDE) m...	765	0.0
3	ref|XM_472224.1| Oryza sativa (japonica cultivar-group), predic...	377	e-101
4	gb|AF411133.1|AF411133 Oryza sativa subsp. japonica violaxanthin...	377	e-101
5	gb|AF288196.3|AF288196 Oryza sativa subsp. indica violaxanthin d...	369	7e-99
6	dbj|AK061554.1| Oryza sativa (japonica cultivar-group) cDNA clon...	353	4e-94
7	emb|AL731623.3|OSJN00263 Oryza sativa genomic DNA, chromosome 4,...	208	1e-50
8	emb|AL607000.3|OSJN00132 Oryza sativa genomic DNA, chromosome 4,...	208	1e-50
9	gb|AF468689.1| Oryza sativa subsp. japonica violaxanthin de-epox...	208	1e-50
10	dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D...	208	1e-50
11	gb|AY876286.1| Zingiber officinale violaxanthin de-epoxidase mRN...	115	2e-22
12	ref|NM_100728.2| Arabidopsis thaliana NPQ1 (NON-PHOTOCHEMICAL QU...	105	2e-19
13	ref|NM_001035923.1| Arabidopsis thaliana NPQ1 (NON-PHOTOCHEMICAL...	105	2e-19
14	gb|AY063067.1| Arabidopsis thaliana putative violaxanthin de-epo...	105	2e-19
15	gb|AF370251.1| Arabidopsis thaliana putative violaxanthin de-epo...	105	2e-19
16	gb|U44133.1|ATU44133 Arabidopsis thaliana violaxanthin de-epoxid...	105	2e-19
17	gb|AC146587.20| Medicago truncatula clone mth2-144j8, complete s...	84	6e-13
18	dbj|AB205051.1| Chrysanthemum x morifolium VDE mRNA for violaxan...	82	2e-12
19	emb|AJ250433.2|SOL250433 Spinacia oleracea mRNA for violaxanthin...	74	5e-10
20	gb|AF462269.2| Camellia sinensis violaxanthin de-epoxidase (vde)...	74	5e-10
21	gb|AC003981.2|AC003981 Genomic sequence for Arabidopsis thaliana...	74	5e-10
22	gb|U39452.1|ATU39452 Arabidopsis thaliana syntaxin-related knoll...	74	5e-10
23	gb|AF385366.2| Lycopersicon esculentum violaxanthin de-epoxidase...	72	2e-09
24	gb|U31462.1|LSU31462 Lactuca sativa violaxanthin de-epoxidase (V...	68	3e-08
25	gb|DQ306798.1| Hevea brasiliensis isolate SSH69 mRNA sequence	64	5e-07
26	gb|U34817.1|NTU34817 Nicotiana tabacum violaxanthin de-epoxidase...	52	0.002
27	gb|AC006932.8|AC006932 Genomic sequence for Arabidopsis thaliana...	44	0.48
28	emb|CR762396.8| Zebrafish DNA sequence from clone DKEY-262O12 in...	42	1.9
29	emb|Z72781.1|SCYGL259W S.cerevisiae chromosome VII reading frame...	42	1.9
30	emb|X94357.1|SCHRVIILT S.cerevisiae left telomeric region from c...	42	1.9
31	emb|Z72782.1|SCYGL260W S.cerevisiae chromosome VII reading frame...	42	1.9
32	emb|CR391947.13| Zebrafish DNA sequence from clone DKEYP-88A4 in...	42	1.9
33	emb|Z81033.1|CEC03C11 Caenorhabditis elegans Cosmid C03C11, comp...	40	7.5
34	emb|AL929561.5| Human DNA sequence from clone DAQB-117O11 on chr...	40	7.5
35	emb|BX248093.4| Human DNA sequence from clone DASS-357K17 on chr...	40	7.5
36	emb|AL662852.9| Human DNA sequence from clone XXbac-228J24 on ch...	40	7.5
37	emb|AL645937.6| Human DNA sequence from clone XXbac-171B11 on ch...	40	7.5
38	emb|BX294140.1| Pirellula sp. strain 1 complete genome; segment ...	40	7.5
39	emb|AJ567484.1|LSA567484 Lactobacillus sakei gap operon (cggR, g...	40	7.5
40	emb|CR774181.3| Human DNA sequence from clone DAAP-270H14 on chr...	40	7.5
41	dbj|AB071869.1| Mesocricetus auratus CNX mRNA for calnexin, comp...	40	7.5
42	emb|BX927132.7| Human DNA sequence from clone DAMA-405I21 on chr...	40	7.5
43	emb|CR388415.2| Human DNA sequence from clone DADB-150K7 on chro...	40	7.5
44	gb|AC012361.10| Homo sapiens BAC clone RP11-348P18 from 2, compl...	40	7.5
45	gb|AC134025.2| Homo sapiens 3 BAC RP11-231I13 (Roswell Park Canc...	40	7.5
46	emb|AL807734.7| Mouse DNA sequence from clone RP23-303N21 on chr...	40	7.5
47	gb|AC158192.2| Selaginella moellendorffii clone JGIASXY-5N4, com...	40	7.5
48	emb|CR936503.1| Lactobacillus sakei strain 23K complete genome	40	7.5
49	gb|AE000782.1| Archaeoglobus fulgidus DSM 4304, complete genome	40	7.5
50	emb|AL929471.16| Mouse DNA sequence from clone RP23-289F24 on ch...	40	7.5
51	emb|AL022727.1|HS80I19 Human DNA sequence from clone RP1-80I19 o...	40	7.5
52	emb|AL445384.3|CNS07ED0 Human chromosome 14 DNA sequence BAC R-4...	40	7.5

---

>gb|AF265294.1|AF265294 Triticum aestivum violaxanthin de-epoxidase (WVDE) mRNA, complete cds
          Length = 1746

 Score =  967 bits (488), Expect = 0.0
 Identities = 539/556 (96%)
 Strand = Plus / Plus

                                                                        
Query: 1    agattttaccggcaagtggtacatttcaagtggcctaaatcctacatttgacacgttcga 60
            ||||||||  ||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 674  agattttagaggcaagtggtacatttcaagtggcctaaatcctacttttgacacgttcga 733

                                                                        
Query: 61   ttgccagcttcacgagtttcgtgtcgagggagacaggcttgttgcaaatttggcatggag 120
            |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 734  ttgccagcttcacgagtttcgtctcgagggagacaggcttgttgcaaatttggcatggag 793

                                                                        
Query: 121  aattcccacccccgacaccggcttcttcaccaggggggccgtgcagcgattcgtgcagga 180
            |||||||||||| ||||||||||||||||||||||||||||||||||| ||||| |||||
Sbjct: 794  aattcccaccccggacaccggcttcttcaccaggggggccgtgcagcggttcgtacagga 853

                                                                        
Query: 181  tccctcacaaccagcaatattgtataaccatgacaacgagtatctgcactatcaggatga 240
            | |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 854  ttcctcacaaccagcaatattgtataaccatgacaacgagtacctgcactatcaggatga 913

                                                                        
Query: 241  ctggtacattctctcatcgaaaatagagaacaaggaagatgactacatatttgtatacta 300
            |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 914  ctggtacattctctcatcgaaaatagagaacaaggacgatgactacatatttgtatacta 973

                                                                        
Query: 301  ccgtggaagaaatgacgcatgggatggatatggtggcgctgttgtgtacacaagaagcaa 360
            ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 974  ccgtggaagaaatgatgcatgggatggatatggtggcgctgttgtgtacacaagaagcaa 1033

                                                                        
Query: 361  ggaattacctgagacaatagtccctgagctagaaagagccgcgaaaagcgtagggcggga 420
            |||||||||||||||||||||||| ||||||||||| ||  |||||||||||||||||||
Sbjct: 1034 ggaattacctgagacaatagtccccgagctagaaagggctacgaaaagcgtagggcggga 1093

                                                                        
Query: 421  cttctccacatttatcaggacagacaacacctgtggtgctgagcctcctcttgcggatag 480
            |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 1094 cttctccacatttatcaggacagacaacacctgtggtgctgagcctcctcttgccgatag 1153

                                                                        
Query: 481  aatcgagaggactgttgagaaaggggagaagctcatcgttgatgaggtaaaggagatcga 540
            |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 1154 aatcgagaggactgttgaaaaaggggagaagctcatcgttgatgaggtaaaggagatcga 1213

                            
Query: 541  aggggagatcgaggga 556
            ||||||||||||||||
Sbjct: 1214 aggggagatcgaggga 1229

---

>gb|AY672650.1| Hordeum vulgare violaxanthin de-epoxidase (VDE) mRNA, partial cds
          Length = 639

 Score =  765 bits (386), Expect = 0.0
 Identities = 493/529 (93%), Gaps = 6/529 (1%)
 Strand = Plus / Plus

                                                                       
Query: 28  aagtggcctaaatcctacatttgacacgttcgattgccagcttcacgagtttcgtgtcga 87
           |||||||||||||||||| |||||||||| |||||||||||||||||||| |||| ||||
Sbjct: 1   aagtggcctaaatcctacttttgacacgtacgattgccagcttcacgagtgtcgtctcga 60

                                                                       
Query: 88  gggagacaggcttgttgcaaatttggcatggagaattcccacccccgacaccggcttctt 147
           | |||||||||| ||||||||||| |||||||||||||| |||||  |||||||||||| 
Sbjct: 61  gagagacaggctagttgcaaatttcgcatggagaattccgaccccgaacaccggcttctg 120

                                                                       
Query: 148 caccaggggggccgtgcagcgattcgtgcaggatccctcacaaccagcaatattgtataa 207
           ||||||||| ||||||||||| ||||| |||||| ||||||||| |||||||||||||||
Sbjct: 121 caccaggggtgccgtgcagcggttcgtacaggattcctcacaactagcaatattgtataa 180

                                                                       
Query: 208 ccatgacaacgagtatctgcactatcaggatgactggtacattctctcatcgaaaataga 267
            |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 acatgacaacgagtacctgcactatcaggatgactggtacattctctcatcgaaaataga 240

                                                                       
Query: 268 gaacaaggaagatgactacatatttgtatactaccgtggaagaaatgacgcatgggatgg 327
           ||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 241 gaacaaggacgatgactacatatttgtatactaccgtggaagaaatgatgcatgggatgg 300

                                                                       
Query: 328 atatggtggcgctgttgtgtacacaagaagcaaggaattacctgagacaatagtccctga 387
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 301 atatggtggcgctgttgtgtacacaagaagcaaggaattacctgagacaatagtccccga 360

                                                                       
Query: 388 gctagaaagagccgcgaaaagcgtagggcgggacttctccacatttatcaggacagacaa 447
           ||||||||| ||  |||||||||||||||||||||||| | ||||||||||||||| |||
Sbjct: 361 gctagaaagggctacgaaaagcgtagggcgggacttctgctcatttatcaggacagtcaa 420

                                                                       
Query: 448 cacctgtggtgctgagcctcctcttgcggatagaatcgagaggactgttgagaaagggga 507
           ||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||
Sbjct: 421 cacctgtggtgctgagcctcctcttgccgatagaatcgagaggactgttgaaaaagggga 480

                                                            
Query: 508 gaagctcatcgttgatgaggtaaaggagatcgaaggggagatcgaggga 556
           ||||||||||| ||||||||||      |||||||||||||||||||||
Sbjct: 481 gaagctcatcgctgatgaggta------atcgaaggggagatcgaggga 523

---

>ref|XM_472224.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1380

 Score =  377 bits (190), Expect = e-101
 Identities = 424/502 (84%)
 Strand = Plus / Plus

                                                                        
Query: 10   cggcaagtggtacatttcaagtggcctaaatcctacatttgacacgttcgattgccagct 69
            |||||||||||| |||||||||||||| ||||| || || ||||| ||||||||||| ||
Sbjct: 633  cggcaagtggtatatttcaagtggcctcaatcccactttcgacacattcgattgccaact 692

                                                                        
Query: 70   tcacgagtttcgtgtcgagggagacaggcttgttgcaaatttggcatggagaattcccac 129
            ||||||||| ||||||||||||||||  ||| | || || ||| |||||||||||| |||
Sbjct: 693  tcacgagttccgtgtcgagggagacaaacttatagcgaacttgacatggagaattcgcac 752

                                                                        
Query: 130  ccccgacaccggcttcttcaccaggggggccgtgcagcgattcgtgcaggatccctcaca 189
            ||||||| | ||||||||||||||    ||| | ||||| || |||||||| ||  ||||
Sbjct: 753  ccccgactctggcttcttcaccagaacagccatacagcggtttgtgcaggacccagcaca 812

                                                                        
Query: 190  accagcaatattgtataaccatgacaacgagtatctgcactatcaggatgactggtacat 249
            ||| || ||  | |||||||||||||||||||  ||||||||||| ||||||||||||||
Sbjct: 813  acccgcgatcctctataaccatgacaacgagttcctgcactatcaagatgactggtacat 872

                                                                        
Query: 250  tctctcatcgaaaatagagaacaaggaagatgactacatatttgtatactaccgtggaag 309
            | ||||||| ||| ||||||||||||||||||||||||| || || |||||||| || ||
Sbjct: 873  tatctcatccaaagtagagaacaaggaagatgactacattttcgtgtactaccgcggcag 932

                                                                        
Query: 310  aaatgacgcatgggatggatatggtggcgctgttgtgtacacaagaagcaaggaattacc 369
            |||||| || |||||||||||||| || |||||| ||||||| |||||||| |   | ||
Sbjct: 933  aaatgatgcgtgggatggatatggaggtgctgttctgtacaccagaagcaaagttgtgcc 992

                                                                        
Query: 370  tgagacaatagtccctgagctagaaagagccgcgaaaagcgtagggcgggacttctccac 429
            |||  ||||||| |||||||||||||| || || ||||||||||| || |||||||||||
Sbjct: 993  tgaatcaatagtacctgagctagaaagggcggcaaaaagcgtaggtcgtgacttctccac 1052

                                                                        
Query: 430  atttatcaggacagacaacacctgtggtgctgagcctcctcttgcggatagaatcgagag 489
            ||| ||||| || ||||||||||| ||| ||||||| ||||||| ||| ||||| |||| 
Sbjct: 1053 attcatcagaaccgacaacacctgcggtcctgagccacctcttgtggagagaatagagaa 1112

                                  
Query: 490  gactgttgagaaaggggagaag 511
            ||| || ||| |||| ||||||
Sbjct: 1113 gaccgtcgagcaaggagagaag 1134

---

>gb|AF411133.1|AF411133 Oryza sativa subsp. japonica violaxanthin de-epoxidase precursor
            (RVDE1) mRNA, complete cds
          Length = 1887

 Score =  377 bits (190), Expect = e-101
 Identities = 424/502 (84%)
 Strand = Plus / Plus

                                                                        
Query: 10   cggcaagtggtacatttcaagtggcctaaatcctacatttgacacgttcgattgccagct 69
            |||||||||||| |||||||||||||| ||||| || || ||||| ||||||||||| ||
Sbjct: 768  cggcaagtggtatatttcaagtggcctcaatcccactttcgacacattcgattgccaact 827

                                                                        
Query: 70   tcacgagtttcgtgtcgagggagacaggcttgttgcaaatttggcatggagaattcccac 129
            ||||||||| ||||||||||||||||  ||| | || || ||| |||||||||||| |||
Sbjct: 828  tcacgagttccgtgtcgagggagacaaacttatagcgaacttgacatggagaattcgcac 887

                                                                        
Query: 130  ccccgacaccggcttcttcaccaggggggccgtgcagcgattcgtgcaggatccctcaca 189
            ||||||| | ||||||||||||||    ||| | ||||| || |||||||| ||  ||||
Sbjct: 888  ccccgactctggcttcttcaccagaacagccatacagcggtttgtgcaggacccagcaca 947

                                                                        
Query: 190  accagcaatattgtataaccatgacaacgagtatctgcactatcaggatgactggtacat 249
            ||| || ||  | |||||||||||||||||||  ||||||||||| ||||||||||||||
Sbjct: 948  acccgcgatcctctataaccatgacaacgagttcctgcactatcaagatgactggtacat 1007

                                                                        
Query: 250  tctctcatcgaaaatagagaacaaggaagatgactacatatttgtatactaccgtggaag 309
            | ||||||| ||| ||||||||||||||||||||||||| || || |||||||| || ||
Sbjct: 1008 tatctcatccaaagtagagaacaaggaagatgactacattttcgtgtactaccgcggcag 1067

                                                                        
Query: 310  aaatgacgcatgggatggatatggtggcgctgttgtgtacacaagaagcaaggaattacc 369
            |||||| || |||||||||||||| || |||||| ||||||| |||||||| |   | ||
Sbjct: 1068 aaatgatgcgtgggatggatatggaggtgctgttctgtacaccagaagcaaagttgtgcc 1127

                                                                        
Query: 370  tgagacaatagtccctgagctagaaagagccgcgaaaagcgtagggcgggacttctccac 429
            |||  ||||||| |||||||||||||| || || ||||||||||| || |||||||||||
Sbjct: 1128 tgaatcaatagtacctgagctagaaagggcggcaaaaagcgtaggtcgtgacttctccac 1187

                                                                        
Query: 430  atttatcaggacagacaacacctgtggtgctgagcctcctcttgcggatagaatcgagag 489
            ||| ||||| || ||||||||||| ||| ||||||| ||||||| ||| ||||| |||| 
Sbjct: 1188 attcatcagaaccgacaacacctgcggtcctgagccacctcttgtggagagaatagagaa 1247

                                  
Query: 490  gactgttgagaaaggggagaag 511
            ||| || ||| |||| ||||||
Sbjct: 1248 gaccgtcgagcaaggagagaag 1269

---

>gb|AF288196.3|AF288196 Oryza sativa subsp. indica violaxanthin de-epoxidase precursor, mRNA,
            complete cds; nuclear gene for chloroplast product
          Length = 1647

 Score =  369 bits (186), Expect = 7e-99
 Identities = 423/502 (84%)
 Strand = Plus / Plus

                                                                        
Query: 10   cggcaagtggtacatttcaagtggcctaaatcctacatttgacacgttcgattgccagct 69
            |||||||||||| |||||||||||||| ||||| || || ||||| ||||||||||| ||
Sbjct: 597  cggcaagtggtatatttcaagtggcctcaatcccactttcgacacattcgattgccaact 656

                                                                        
Query: 70   tcacgagtttcgtgtcgagggagacaggcttgttgcaaatttggcatggagaattcccac 129
            ||||||||| ||||||||||||||||  ||| | || || ||| |||||||||||| |||
Sbjct: 657  tcacgagttccgtgtcgagggagacaaacttatagcgaacttgacatggagaattcgcac 716

                                                                        
Query: 130  ccccgacaccggcttcttcaccaggggggccgtgcagcgattcgtgcaggatccctcaca 189
            ||||||| | ||||||||||||||    ||| | ||||| || |||||||| ||  ||||
Sbjct: 717  ccccgactctggcttcttcaccagaacagccatacagcggtttgtgcaggacccagcaca 776

                                                                        
Query: 190  accagcaatattgtataaccatgacaacgagtatctgcactatcaggatgactggtacat 249
            ||| || ||  | |||||||||||||||||||  ||||||||||| ||||||||||||||
Sbjct: 777  acccgcgatcctctataaccatgacaacgagttcctgcactatcaagatgactggtacat 836

                                                                        
Query: 250  tctctcatcgaaaatagagaacaaggaagatgactacatatttgtatactaccgtggaag 309
            | ||||||| ||| ||||||||||||||||||||||||| || ||||||||||| || ||
Sbjct: 837  tatctcatccaaagtagagaacaaggaagatgactacattttcgtatactaccgcggcag 896

                                                                        
Query: 310  aaatgacgcatgggatggatatggtggcgctgttgtgtacacaagaagcaaggaattacc 369
            |||||| || |||||||| |||||||| |||||| ||||||| |||||||| |   | ||
Sbjct: 897  aaatgatgcgtgggatggctatggtggtgctgttctgtacaccagaagcaaagttgtgcc 956

                                                                        
Query: 370  tgagacaatagtccctgagctagaaagagccgcgaaaagcgtagggcgggacttctccac 429
            |||  ||||||| |||||||||||||| || || ||||||||||| || |||||||||||
Sbjct: 957  tgaatcaatagtacctgagctagaaagggcggcaaaaagcgtaggtcgcgacttctccac 1016

                                                                        
Query: 430  atttatcaggacagacaacacctgtggtgctgagcctcctcttgcggatagaatcgagag 489
             || |||||||| ||||||||||| ||| | ||||| ||||| | ||| ||||| |||| 
Sbjct: 1017 gttcatcaggaccgacaacacctgcggtcccgagccacctctcgtggagagaatagagaa 1076

                                  
Query: 490  gactgttgagaaaggggagaag 511
            ||| || ||| |||| ||||||
Sbjct: 1077 gaccgtcgagcaaggagagaag 1098

---

>dbj|AK061554.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-311-B12, full
           insert sequence
          Length = 955

 Score =  353 bits (178), Expect = 4e-94
 Identities = 409/486 (84%)
 Strand = Plus / Plus

                                                                       
Query: 26  tcaagtggcctaaatcctacatttgacacgttcgattgccagcttcacgagtttcgtgtc 85
           ||||||||||| ||||| || || ||||| ||||||||||| ||||||||||| ||||||
Sbjct: 1   tcaagtggcctcaatcccactttcgacacattcgattgccaacttcacgagttccgtgtc 60

                                                                       
Query: 86  gagggagacaggcttgttgcaaatttggcatggagaattcccacccccgacaccggcttc 145
           ||||||||||  ||| | || || ||| |||||||||||| |||||||||| | ||||||
Sbjct: 61  gagggagacaaacttatagcgaacttgacatggagaattcgcacccccgactctggcttc 120

                                                                       
Query: 146 ttcaccaggggggccgtgcagcgattcgtgcaggatccctcacaaccagcaatattgtat 205
           ||||||||    ||| | ||||| || |||||||| ||  ||||||| || ||  | |||
Sbjct: 121 ttcaccagaacagccatacagcggtttgtgcaggacccagcacaacccgcgatcctctat 180

                                                                       
Query: 206 aaccatgacaacgagtatctgcactatcaggatgactggtacattctctcatcgaaaata 265
           ||||||||||||||||  ||||||||||| ||||||||||||||| ||||||| ||| ||
Sbjct: 181 aaccatgacaacgagttcctgcactatcaagatgactggtacattatctcatccaaagta 240

                                                                       
Query: 266 gagaacaaggaagatgactacatatttgtatactaccgtggaagaaatgacgcatgggat 325
           ||||||||||||||||||||||| || || |||||||| || |||||||| || ||||||
Sbjct: 241 gagaacaaggaagatgactacattttcgtgtactaccgcggcagaaatgatgcgtgggat 300

                                                                       
Query: 326 ggatatggtggcgctgttgtgtacacaagaagcaaggaattacctgagacaatagtccct 385
           |||||||| || |||||| ||||||| |||||||| |   | |||||  ||||||| |||
Sbjct: 301 ggatatggaggtgctgttctgtacaccagaagcaaagttgtgcctgaatcaatagtacct 360

                                                                       
Query: 386 gagctagaaagagccgcgaaaagcgtagggcgggacttctccacatttatcaggacagac 445
           ||||||||||| || || ||||||||||| || |||||||||||||| ||||| || |||
Sbjct: 361 gagctagaaagggcggcaaaaagcgtaggtcgtgacttctccacattcatcagaaccgac 420

                                                                       
Query: 446 aacacctgtggtgctgagcctcctcttgcggatagaatcgagaggactgttgagaaaggg 505
           |||||||| ||| ||||||| ||||||| ||| ||||| |||| ||| || ||| |||| 
Sbjct: 421 aacacctgcggtcctgagccacctcttgtggagagaatagagaagaccgtcgagcaagga 480

                 
Query: 506 gagaag 511
           ||||||
Sbjct: 481 gagaag 486

---

>emb|AL731623.3|OSJN00263 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0083D01,
              complete sequence
          Length = 148353

 Score =  208 bits (105), Expect = 1e-50
 Identities = 228/269 (84%)
 Strand = Plus / Minus

                                                                          
Query: 243    ggtacattctctcatcgaaaatagagaacaaggaagatgactacatatttgtatactacc 302
              |||||||| ||||||| ||| ||||||||||||||||||||||||| || || |||||||
Sbjct: 143638 ggtacattatctcatccaaagtagagaacaaggaagatgactacattttcgtgtactacc 143579

                                                                          
Query: 303    gtggaagaaatgacgcatgggatggatatggtggcgctgttgtgtacacaagaagcaagg 362
              | || |||||||| || |||||||||||||| || |||||| ||||||| |||||||| |
Sbjct: 143578 gcggcagaaatgatgcgtgggatggatatggaggtgctgttctgtacaccagaagcaaag 143519

                                                                          
Query: 363    aattacctgagacaatagtccctgagctagaaagagccgcgaaaagcgtagggcgggact 422
                 | |||||  ||||||| |||||||||||||| || || ||||||||||| || ||||
Sbjct: 143518 ttgtgcctgaatcaatagtacctgagctagaaagggcggcaaaaagcgtaggtcgtgact 143459

                                                                          
Query: 423    tctccacatttatcaggacagacaacacctgtggtgctgagcctcctcttgcggatagaa 482
              |||||||||| ||||| || ||||||||||| ||| ||||||| ||||||| ||| ||||
Sbjct: 143458 tctccacattcatcagaaccgacaacacctgcggtcctgagccacctcttgtggagagaa 143399

                                           
Query: 483    tcgagaggactgttgagaaaggggagaag 511
              | |||| ||| || ||| |||| ||||||
Sbjct: 143398 tagagaagaccgtcgagcaaggagagaag 143370



 Score =  176 bits (89), Expect = 5e-41
 Identities = 200/237 (84%)
 Strand = Plus / Minus

                                                                          
Query: 10     cggcaagtggtacatttcaagtggcctaaatcctacatttgacacgttcgattgccagct 69
              |||||||||||| |||||||||||||| ||||| || || ||||| ||||||||||| ||
Sbjct: 143940 cggcaagtggtatatttcaagtggcctcaatcccactttcgacacattcgattgccaact 143881

                                                                          
Query: 70     tcacgagtttcgtgtcgagggagacaggcttgttgcaaatttggcatggagaattcccac 129
              ||||||||| ||||||||||||||||  ||| | || || ||| |||||||||||| |||
Sbjct: 143880 tcacgagttccgtgtcgagggagacaaacttatagcgaacttgacatggagaattcgcac 143821

                                                                          
Query: 130    ccccgacaccggcttcttcaccaggggggccgtgcagcgattcgtgcaggatccctcaca 189
              ||||||| | ||||||||||||||    ||| | ||||| || |||||||| ||  ||||
Sbjct: 143820 ccccgactctggcttcttcaccagaacagccatacagcggtttgtgcaggacccagcaca 143761

                                                                       
Query: 190    accagcaatattgtataaccatgacaacgagtatctgcactatcaggatgactggta 246
              ||| || ||  | |||||||||||||||||||  ||||||||||| |||||||||||
Sbjct: 143760 acccgcgatcctctataaccatgacaacgagttcctgcactatcaagatgactggta 143704

---

>emb|AL607000.3|OSJN00132 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0089B03,
             complete sequence
          Length = 130910

 Score =  208 bits (105), Expect = 1e-50
 Identities = 228/269 (84%)
 Strand = Plus / Minus

                                                                         
Query: 243   ggtacattctctcatcgaaaatagagaacaaggaagatgactacatatttgtatactacc 302
             |||||||| ||||||| ||| ||||||||||||||||||||||||| || || |||||||
Sbjct: 30877 ggtacattatctcatccaaagtagagaacaaggaagatgactacattttcgtgtactacc 30818

                                                                         
Query: 303   gtggaagaaatgacgcatgggatggatatggtggcgctgttgtgtacacaagaagcaagg 362
             | || |||||||| || |||||||||||||| || |||||| ||||||| |||||||| |
Sbjct: 30817 gcggcagaaatgatgcgtgggatggatatggaggtgctgttctgtacaccagaagcaaag 30758

                                                                         
Query: 363   aattacctgagacaatagtccctgagctagaaagagccgcgaaaagcgtagggcgggact 422
                | |||||  ||||||| |||||||||||||| || || ||||||||||| || ||||
Sbjct: 30757 ttgtgcctgaatcaatagtacctgagctagaaagggcggcaaaaagcgtaggtcgtgact 30698

                                                                         
Query: 423   tctccacatttatcaggacagacaacacctgtggtgctgagcctcctcttgcggatagaa 482
             |||||||||| ||||| || ||||||||||| ||| ||||||| ||||||| ||| ||||
Sbjct: 30697 tctccacattcatcagaaccgacaacacctgcggtcctgagccacctcttgtggagagaa 30638

                                          
Query: 483   tcgagaggactgttgagaaaggggagaag 511
             | |||| ||| || ||| |||| ||||||
Sbjct: 30637 tagagaagaccgtcgagcaaggagagaag 30609



 Score =  176 bits (89), Expect = 5e-41
 Identities = 200/237 (84%)
 Strand = Plus / Minus

                                                                         
Query: 10    cggcaagtggtacatttcaagtggcctaaatcctacatttgacacgttcgattgccagct 69
             |||||||||||| |||||||||||||| ||||| || || ||||| ||||||||||| ||
Sbjct: 31179 cggcaagtggtatatttcaagtggcctcaatcccactttcgacacattcgattgccaact 31120

                                                                         
Query: 70    tcacgagtttcgtgtcgagggagacaggcttgttgcaaatttggcatggagaattcccac 129
             ||||||||| ||||||||||||||||  ||| | || || ||| |||||||||||| |||
Sbjct: 31119 tcacgagttccgtgtcgagggagacaaacttatagcgaacttgacatggagaattcgcac 31060

                                                                         
Query: 130   ccccgacaccggcttcttcaccaggggggccgtgcagcgattcgtgcaggatccctcaca 189
             ||||||| | ||||||||||||||    ||| | ||||| || |||||||| ||  ||||
Sbjct: 31059 ccccgactctggcttcttcaccagaacagccatacagcggtttgtgcaggacccagcaca 31000

                                                                      
Query: 190   accagcaatattgtataaccatgacaacgagtatctgcactatcaggatgactggta 246
             ||| || ||  | |||||||||||||||||||  ||||||||||| |||||||||||
Sbjct: 30999 acccgcgatcctctataaccatgacaacgagttcctgcactatcaagatgactggta 30943

---

>gb|AF468689.1| Oryza sativa subsp. japonica violaxanthin de-epoxidase (RVDE1) gene,
            complete cds
          Length = 1940

 Score =  208 bits (105), Expect = 1e-50
 Identities = 228/269 (84%)
 Strand = Plus / Plus

                                                                        
Query: 243  ggtacattctctcatcgaaaatagagaacaaggaagatgactacatatttgtatactacc 302
            |||||||| ||||||| ||| ||||||||||||||||||||||||| || || |||||||
Sbjct: 1415 ggtacattatctcatccaaagtagagaacaaggaagatgactacattttcgtgtactacc 1474

                                                                        
Query: 303  gtggaagaaatgacgcatgggatggatatggtggcgctgttgtgtacacaagaagcaagg 362
            | || |||||||| || |||||||||||||| || |||||| ||||||| |||||||| |
Sbjct: 1475 gcggcagaaatgatgcgtgggatggatatggaggtgctgttctgtacaccagaagcaaag 1534

                                                                        
Query: 363  aattacctgagacaatagtccctgagctagaaagagccgcgaaaagcgtagggcgggact 422
               | |||||  ||||||| |||||||||||||| || || ||||||||||| || ||||
Sbjct: 1535 ttgtgcctgaatcaatagtacctgagctagaaagggcggcaaaaagcgtaggtcgtgact 1594

                                                                        
Query: 423  tctccacatttatcaggacagacaacacctgtggtgctgagcctcctcttgcggatagaa 482
            |||||||||| ||||| || ||||||||||| ||| ||||||| ||||||| ||| ||||
Sbjct: 1595 tctccacattcatcagaaccgacaacacctgcggtcctgagccacctcttgtggagagaa 1654

                                         
Query: 483  tcgagaggactgttgagaaaggggagaag 511
            | |||| ||| || ||| |||| ||||||
Sbjct: 1655 tagagaagaccgtcgagcaaggagagaag 1683



 Score =  176 bits (89), Expect = 5e-41
 Identities = 200/237 (84%)
 Strand = Plus / Plus

                                                                        
Query: 10   cggcaagtggtacatttcaagtggcctaaatcctacatttgacacgttcgattgccagct 69
            |||||||||||| |||||||||||||| ||||| || || ||||| ||||||||||| ||
Sbjct: 1113 cggcaagtggtatatttcaagtggcctcaatcccactttcgacacattcgattgccaact 1172

                                                                        
Query: 70   tcacgagtttcgtgtcgagggagacaggcttgttgcaaatttggcatggagaattcccac 129
            ||||||||| ||||||||||||||||  ||| | || || ||| |||||||||||| |||
Sbjct: 1173 tcacgagttccgtgtcgagggagacaaacttatagcgaacttgacatggagaattcgcac 1232

                                                                        
Query: 130  ccccgacaccggcttcttcaccaggggggccgtgcagcgattcgtgcaggatccctcaca 189
            ||||||| | ||||||||||||||    ||| | ||||| || |||||||| ||  ||||
Sbjct: 1233 ccccgactctggcttcttcaccagaacagccatacagcggtttgtgcaggacccagcaca 1292

                                                                     
Query: 190  accagcaatattgtataaccatgacaacgagtatctgcactatcaggatgactggta 246
            ||| || ||  | |||||||||||||||||||  ||||||||||| |||||||||||
Sbjct: 1293 acccgcgatcctctataaccatgacaacgagttcctgcactatcaagatgactggta 1349

---

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  208 bits (105), Expect = 1e-50
 Identities = 228/269 (84%)
 Strand = Plus / Minus

                                                                            
Query: 243      ggtacattctctcatcgaaaatagagaacaaggaagatgactacatatttgtatactacc 302
                |||||||| ||||||| ||| ||||||||||||||||||||||||| || || |||||||
Sbjct: 18563011 ggtacattatctcatccaaagtagagaacaaggaagatgactacattttcgtgtactacc 18562952

                                                                            
Query: 303      gtggaagaaatgacgcatgggatggatatggtggcgctgttgtgtacacaagaagcaagg 362
                | || |||||||| || |||||||||||||| || |||||| ||||||| |||||||| |
Sbjct: 18562951 gcggcagaaatgatgcgtgggatggatatggaggtgctgttctgtacaccagaagcaaag 18562892

                                                                            
Query: 363      aattacctgagacaatagtccctgagctagaaagagccgcgaaaagcgtagggcgggact 422
                   | |||||  ||||||| |||||||||||||| || || ||||||||||| || ||||
Sbjct: 18562891 ttgtgcctgaatcaatagtacctgagctagaaagggcggcaaaaagcgtaggtcgtgact 18562832

                                                                            
Query: 423      tctccacatttatcaggacagacaacacctgtggtgctgagcctcctcttgcggatagaa 482
                |||||||||| ||||| || ||||||||||| ||| ||||||| ||||||| ||| ||||
Sbjct: 18562831 tctccacattcatcagaaccgacaacacctgcggtcctgagccacctcttgtggagagaa 18562772

                                             
Query: 483      tcgagaggactgttgagaaaggggagaag 511
                | |||| ||| || ||| |||| ||||||
Sbjct: 18562771 tagagaagaccgtcgagcaaggagagaag 18562743



 Score =  176 bits (89), Expect = 5e-41
 Identities = 200/237 (84%)
 Strand = Plus / Minus

                                                                            
Query: 10       cggcaagtggtacatttcaagtggcctaaatcctacatttgacacgttcgattgccagct 69
                |||||||||||| |||||||||||||| ||||| || || ||||| ||||||||||| ||
Sbjct: 18563313 cggcaagtggtatatttcaagtggcctcaatcccactttcgacacattcgattgccaact 18563254

                                                                            
Query: 70       tcacgagtttcgtgtcgagggagacaggcttgttgcaaatttggcatggagaattcccac 129
                ||||||||| ||||||||||||||||  ||| | || || ||| |||||||||||| |||
Sbjct: 18563253 tcacgagttccgtgtcgagggagacaaacttatagcgaacttgacatggagaattcgcac 18563194

                                                                            
Query: 130      ccccgacaccggcttcttcaccaggggggccgtgcagcgattcgtgcaggatccctcaca 189
                ||||||| | ||||||||||||||    ||| | ||||| || |||||||| ||  ||||
Sbjct: 18563193 ccccgactctggcttcttcaccagaacagccatacagcggtttgtgcaggacccagcaca 18563134

                                                                         
Query: 190      accagcaatattgtataaccatgacaacgagtatctgcactatcaggatgactggta 246
                ||| || ||  | |||||||||||||||||||  ||||||||||| |||||||||||
Sbjct: 18563133 acccgcgatcctctataaccatgacaacgagttcctgcactatcaagatgactggta 18563077

---

>gb|AY876286.1| Zingiber officinale violaxanthin de-epoxidase mRNA, partial cds
          Length = 509

 Score =  115 bits (58), Expect = 2e-22
 Identities = 103/118 (87%)
 Strand = Plus / Plus

                                                                       
Query: 216 acgagtatctgcactatcaggatgactggtacattctctcatcgaaaatagagaacaagg 275
           ||||||| || |||||||||||||||||||||||| | ||||| ||  | ||||| || |
Sbjct: 386 acgagtacctccactatcaggatgactggtacattatatcatccaaggtcgagaataaag 445

                                                                     
Query: 276 aagatgactacatatttgtatactaccgtggaagaaatgacgcatgggatggatatgg 333
           |||||||||||||||||||||||||||| || |||||||| || |||||||| |||||
Sbjct: 446 aagatgactacatatttgtatactaccgaggtagaaatgatgcctgggatggctatgg 503

---

>ref|NM_100728.2| Arabidopsis thaliana NPQ1 (NON-PHOTOCHEMICAL QUENCHING 1) AT1G08550
            (NPQ1) transcript variant AT1G08550.1 mRNA, complete cds
          Length = 1571

 Score =  105 bits (53), Expect = 2e-19
 Identities = 125/149 (83%)
 Strand = Plus / Plus

                                                                        
Query: 209  catgacaacgagtatctgcactatcaggatgactggtacattctctcatcgaaaatagag 268
            |||||||||||||| || |||||||| ||||||||||| || || ||||| || ||||||
Sbjct: 879  catgacaacgagtaccttcactatcaagatgactggtatatcctgtcatcaaagatagag 938

                                                                        
Query: 269  aacaaggaagatgactacatatttgtatactaccgtggaagaaatgacgcatgggatgga 328
            || ||    || ||||| ||||||||||||||||||||  |||| || || |||||||||
Sbjct: 939  aataaacctgaagactatatatttgtatactaccgtgggcgaaacgatgcttgggatgga 998

                                         
Query: 329  tatggtggcgctgttgtgtacacaagaag 357
            |||||||| || ||||| ||||| |||||
Sbjct: 999  tatggtggtgcagttgtatacacgagaag 1027



 Score = 44.1 bits (22), Expect = 0.48
 Identities = 61/74 (82%)
 Strand = Plus / Plus

                                                                       
Query: 5   tttaccggcaagtggtacatttcaagtggcctaaatcctacatttgacacgttcgattgc 64
           |||| ||| |||||||||||| |||||||| | ||||| || |||||  | ||||| |||
Sbjct: 672 tttaacgggaagtggtacattacaagtggcttgaatccaacctttgatgccttcgactgc 731

                         
Query: 65  cagcttcacgagtt 78
           ||||| || |||||
Sbjct: 732 cagctgcatgagtt 745

---

>ref|NM_001035923.1| Arabidopsis thaliana NPQ1 (NON-PHOTOCHEMICAL QUENCHING 1) AT1G08550
            (NPQ1) transcript variant AT1G08550.2 mRNA, complete cds
          Length = 1776

 Score =  105 bits (53), Expect = 2e-19
 Identities = 125/149 (83%)
 Strand = Plus / Plus

                                                                        
Query: 209  catgacaacgagtatctgcactatcaggatgactggtacattctctcatcgaaaatagag 268
            |||||||||||||| || |||||||| ||||||||||| || || ||||| || ||||||
Sbjct: 1084 catgacaacgagtaccttcactatcaagatgactggtatatcctgtcatcaaagatagag 1143

                                                                        
Query: 269  aacaaggaagatgactacatatttgtatactaccgtggaagaaatgacgcatgggatgga 328
            || ||    || ||||| ||||||||||||||||||||  |||| || || |||||||||
Sbjct: 1144 aataaacctgaagactatatatttgtatactaccgtgggcgaaacgatgcttgggatgga 1203

                                         
Query: 329  tatggtggcgctgttgtgtacacaagaag 357
            |||||||| || ||||| ||||| |||||
Sbjct: 1204 tatggtggtgcagttgtatacacgagaag 1232



 Score = 44.1 bits (22), Expect = 0.48
 Identities = 61/74 (82%)
 Strand = Plus / Plus

                                                                       
Query: 5   tttaccggcaagtggtacatttcaagtggcctaaatcctacatttgacacgttcgattgc 64
           |||| ||| |||||||||||| |||||||| | ||||| || |||||  | ||||| |||
Sbjct: 877 tttaacgggaagtggtacattacaagtggcttgaatccaacctttgatgccttcgactgc 936

                         
Query: 65  cagcttcacgagtt 78
           ||||| || |||||
Sbjct: 937 cagctgcatgagtt 950

---

>gb|AY063067.1| Arabidopsis thaliana putative violaxanthin de-epoxidase precursor
           (At1g08550) mRNA, complete cds
          Length = 1420

 Score =  105 bits (53), Expect = 2e-19
 Identities = 125/149 (83%)
 Strand = Plus / Plus

                                                                       
Query: 209 catgacaacgagtatctgcactatcaggatgactggtacattctctcatcgaaaatagag 268
           |||||||||||||| || |||||||| ||||||||||| || || ||||| || ||||||
Sbjct: 841 catgacaacgagtaccttcactatcaagatgactggtatatcctgtcatcaaagatagag 900

                                                                       
Query: 269 aacaaggaagatgactacatatttgtatactaccgtggaagaaatgacgcatgggatgga 328
           || ||    || ||||| ||||||||||||||||||||  |||| || || |||||||||
Sbjct: 901 aataaacctgaagactatatatttgtatactaccgtgggcgaaacgatgcttgggatgga 960

                                        
Query: 329 tatggtggcgctgttgtgtacacaagaag 357
           |||||||| || ||||| ||||| |||||
Sbjct: 961 tatggtggtgcagttgtatacacgagaag 989



 Score = 44.1 bits (22), Expect = 0.48
 Identities = 61/74 (82%)
 Strand = Plus / Plus

                                                                       
Query: 5   tttaccggcaagtggtacatttcaagtggcctaaatcctacatttgacacgttcgattgc 64
           |||| ||| |||||||||||| |||||||| | ||||| || |||||  | ||||| |||
Sbjct: 634 tttaacgggaagtggtacattacaagtggcttgaatccaacctttgatgccttcgactgc 693

                         
Query: 65  cagcttcacgagtt 78
           ||||| || |||||
Sbjct: 694 cagctgcatgagtt 707

---

>gb|AF370251.1| Arabidopsis thaliana putative violaxanthin de-epoxidase precursor
            (U44133) (At1g08550) mRNA, complete cds
          Length = 1705

 Score =  105 bits (53), Expect = 2e-19
 Identities = 125/149 (83%)
 Strand = Plus / Plus

                                                                        
Query: 209  catgacaacgagtatctgcactatcaggatgactggtacattctctcatcgaaaatagag 268
            |||||||||||||| || |||||||| ||||||||||| || || ||||| || ||||||
Sbjct: 996  catgacaacgagtaccttcactatcaagatgactggtatatcctgtcatcaaagatagag 1055

                                                                        
Query: 269  aacaaggaagatgactacatatttgtatactaccgtggaagaaatgacgcatgggatgga 328
            || ||    || ||||| ||||||||||||||||||||  |||| || || |||||||||
Sbjct: 1056 aataaacctgaagactatatatttgtatactaccgtgggcgaaacgatgcttgggatgga 1115

                                         
Query: 329  tatggtggcgctgttgtgtacacaagaag 357
            |||||||| || ||||| ||||| |||||
Sbjct: 1116 tatggtggtgcagttgtatacacgagaag 1144



 Score = 44.1 bits (22), Expect = 0.48
 Identities = 61/74 (82%)
 Strand = Plus / Plus

                                                                       
Query: 5   tttaccggcaagtggtacatttcaagtggcctaaatcctacatttgacacgttcgattgc 64
           |||| ||| |||||||||||| |||||||| | ||||| || |||||  | ||||| |||
Sbjct: 789 tttaacgggaagtggtacattacaagtggcttgaatccaacctttgatgccttcgactgc 848

                         
Query: 65  cagcttcacgagtt 78
           ||||| || |||||
Sbjct: 849 cagctgcatgagtt 862

---

>gb|U44133.1|ATU44133 Arabidopsis thaliana violaxanthin de-epoxidase precursor (AVDE1)
            mRNA, complete cds
          Length = 1555

 Score =  105 bits (53), Expect = 2e-19
 Identities = 125/149 (83%)
 Strand = Plus / Plus

                                                                        
Query: 209  catgacaacgagtatctgcactatcaggatgactggtacattctctcatcgaaaatagag 268
            |||||||||||||| || |||||||| ||||||||||| || || ||||| || ||||||
Sbjct: 885  catgacaacgagtaccttcactatcaagatgactggtatatcctgtcatcaaagatagag 944

                                                                        
Query: 269  aacaaggaagatgactacatatttgtatactaccgtggaagaaatgacgcatgggatgga 328
            || ||    || ||||| ||||||||||||||||||||  |||| || || |||||||||
Sbjct: 945  aataaacctgaagactatatatttgtatactaccgtgggcgaaacgatgcttgggatgga 1004

                                         
Query: 329  tatggtggcgctgttgtgtacacaagaag 357
            |||||||| || ||||| ||||| |||||
Sbjct: 1005 tatggtggtgcagttgtatacacgagaag 1033



 Score = 44.1 bits (22), Expect = 0.48
 Identities = 61/74 (82%)
 Strand = Plus / Plus

                                                                       
Query: 5   tttaccggcaagtggtacatttcaagtggcctaaatcctacatttgacacgttcgattgc 64
           |||| ||| |||||||||||| |||||||| | ||||| || |||||  | ||||| |||
Sbjct: 678 tttaacgggaagtggtacattacaagtggcttgaatccaacctttgatgccttcgactgc 737

                         
Query: 65  cagcttcacgagtt 78
           ||||| || |||||
Sbjct: 738 cagctgcatgagtt 751

---

>gb|AC146587.20| Medicago truncatula clone mth2-144j8, complete sequence
          Length = 113373

 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 69/78 (88%)
 Strand = Plus / Plus

                                                                         
Query: 277   agatgactacatatttgtatactaccgtggaagaaatgacgcatgggatggatatggtgg 336
             ||||||||| |||||| |||||||||| || ||||| || ||||||||||| ||||||||
Sbjct: 58090 agatgactatatatttatatactaccgaggtagaaacgatgcatgggatggctatggtgg 58149

                               
Query: 337   cgctgttgtgtacacaag 354
              || ||||||||||||||
Sbjct: 58150 tgccgttgtgtacacaag 58167



 Score = 46.1 bits (23), Expect = 0.12
 Identities = 44/51 (86%)
 Strand = Plus / Plus

                                                                
Query: 1     agattttaccggcaagtggtacatttcaagtggcctaaatcctacatttga 51
             ||||||||  |||||||||| |||  | |||||| ||||||||||||||||
Sbjct: 57173 agattttagtggcaagtggttcatcactagtggcttaaatcctacatttga 57223

---

>dbj|AB205051.1| Chrysanthemum x morifolium VDE mRNA for violaxanthin deepoxidase,
            complete cds
          Length = 1797

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 68/77 (88%)
 Strand = Plus / Plus

                                                                        
Query: 281  gactacatatttgtatactaccgtggaagaaatgacgcatgggatggatatggtggcgct 340
            ||||||||||||||||| |||||||||||||| || |||||||||||||| ||||| || 
Sbjct: 1131 gactacatatttgtatattaccgtggaagaaacgatgcatgggatggatacggtggagcc 1190

                             
Query: 341  gttgtgtacacaagaag 357
            ||  | |||||||||||
Sbjct: 1191 gtaatttacacaagaag 1207



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                 
Query: 14  aagtggtacatttcaagtggcctaaatcctacatttga 51
           |||||||||||  ||||||| |||||||||||||||||
Sbjct: 864 aagtggtacataacaagtggtctaaatcctacatttga 901

---

>emb|AJ250433.2|SOL250433 Spinacia oleracea mRNA for violaxanthin de-epoxidase (svde1 gene)
          Length = 1686

 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 127/157 (80%)
 Strand = Plus / Plus

                                                                        
Query: 201  tgtataaccatgacaacgagtatctgcactatcaggatgactggtacattctctcatcga 260
            ||||||| |||||||| |  ||||| |||||||| ||||| |||||||| || || || |
Sbjct: 863  tgtataatcatgacaatgcatatcttcactatcaagatgattggtacatcctatcttcta 922

                                                                        
Query: 261  aaatagagaacaaggaagatgactacatatttgtatactaccgtggaagaaatgacgcat 320
            |||| || ||  |   |||||||||| |||||||||| ||||| || || ||||| || |
Sbjct: 923  aaattgaaaatcaaccagatgactacgtatttgtatattaccgaggcaggaatgatgcgt 982

                                                 
Query: 321  gggatggatatggtggcgctgttgtgtacacaagaag 357
            ||||||| |||||||||||  || | |||||||||||
Sbjct: 983  gggatggctatggtggcgcatttctttacacaagaag 1019

---

>gb|AF462269.2| Camellia sinensis violaxanthin de-epoxidase (vde) mRNA, complete cds
          Length = 1562

 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 121/149 (81%)
 Strand = Plus / Plus

                                                                        
Query: 209  catgacaacgagtatctgcactatcaggatgactggtacattctctcatcgaaaatagag 268
            |||||||| || ||||| || || || ||||||||||| ||| | || || || ||||||
Sbjct: 895  catgacaatgaatatctccattaccaagatgactggtatattttgtcctccaagatagag 954

                                                                        
Query: 269  aacaaggaagatgactacatatttgtatactaccgtggaagaaatgacgcatgggatgga 328
            || ||    ||||||||  |||||||||| || || || || || || |||||||| || 
Sbjct: 955  aataaaccggatgactatgtatttgtatattatcgaggcaggaacgatgcatgggacggc 1014

                                         
Query: 329  tatggtggcgctgttgtgtacacaagaag 357
            |||||||||||||||||||||||||||||
Sbjct: 1015 tatggtggcgctgttgtgtacacaagaag 1043

---

>gb|AC003981.2|AC003981 Genomic sequence for Arabidopsis thaliana BAC F22O13 from chromosome
            I, complete sequence
          Length = 133843

 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 67/77 (87%)
 Strand = Plus / Plus

                                                                        
Query: 281  gactacatatttgtatactaccgtggaagaaatgacgcatgggatggatatggtggcgct 340
            ||||| ||||||||||||||||||||  |||| || || ||||||||||||||||| || 
Sbjct: 6835 gactatatatttgtatactaccgtgggcgaaacgatgcttgggatggatatggtggtgca 6894

                             
Query: 341  gttgtgtacacaagaag 357
            ||||| ||||| |||||
Sbjct: 6895 gttgtatacacgagaag 6911



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                  
Query: 209  catgacaacgagtatctgcactatcaggatgactggta 246
            |||||||||||||| || |||||||| |||||||||||
Sbjct: 6672 catgacaacgagtaccttcactatcaagatgactggta 6709



 Score = 44.1 bits (22), Expect = 0.48
 Identities = 61/74 (82%)
 Strand = Plus / Plus

                                                                        
Query: 5    tttaccggcaagtggtacatttcaagtggcctaaatcctacatttgacacgttcgattgc 64
            |||| ||| |||||||||||| |||||||| | ||||| || |||||  | ||||| |||
Sbjct: 6465 tttaacgggaagtggtacattacaagtggcttgaatccaacctttgatgccttcgactgc 6524

                          
Query: 65   cagcttcacgagtt 78
            ||||| || |||||
Sbjct: 6525 cagctgcatgagtt 6538

---

>gb|U39452.1|ATU39452 Arabidopsis thaliana syntaxin-related knolle mRNA, complete cds
          Length = 2884

 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 67/77 (87%)
 Strand = Plus / Minus

                                                                        
Query: 281  gactacatatttgtatactaccgtggaagaaatgacgcatgggatggatatggtggcgct 340
            ||||| ||||||||||||||||||||  |||| || || ||||||||||||||||| || 
Sbjct: 2319 gactatatatttgtatactaccgtgggcgaaacgatgcttgggatggatatggtggtgca 2260

                             
Query: 341  gttgtgtacacaagaag 357
            ||||| ||||| |||||
Sbjct: 2259 gttgtatacacgagaag 2243



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                  
Query: 209  catgacaacgagtatctgcactatcaggatgactggta 246
            |||||||||||||| || |||||||| |||||||||||
Sbjct: 2482 catgacaacgagtaccttcactatcaagatgactggta 2445



 Score = 44.1 bits (22), Expect = 0.48
 Identities = 61/74 (82%)
 Strand = Plus / Minus

                                                                        
Query: 5    tttaccggcaagtggtacatttcaagtggcctaaatcctacatttgacacgttcgattgc 64
            |||| ||| |||||||||||| |||||||| | ||||| || |||||  | ||||| |||
Sbjct: 2689 tttaacgggaagtggtacattacaagtggcttgaatccaacctttgatgccttcgactgc 2630

                          
Query: 65   cagcttcacgagtt 78
            ||||| || |||||
Sbjct: 2629 cagctgcatgagtt 2616

---

>gb|AF385366.2| Lycopersicon esculentum violaxanthin de-epoxidase mRNA, partial cds
          Length = 1052

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 105/128 (82%)
 Strand = Plus / Plus

                                                                       
Query: 209 catgacaacgagtatctgcactatcaggatgactggtacattctctcatcgaaaatagag 268
           ||||| || |||||||| ||||| || ||||||||||||||| | ||||| ||| | || 
Sbjct: 379 catgataatgagtatcttcactaccaagatgactggtacattttgtcatccaaagttgaa 438

                                                                       
Query: 269 aacaaggaagatgactacatatttgtatactaccgtggaagaaatgacgcatgggatgga 328
           ||||    |||||| ||||||||||| |||||    || |||||||| ||||||||||||
Sbjct: 439 aacagtccagatgattacatatttgtgtactataagggcagaaatgatgcatgggatgga 498

                   
Query: 329 tatggtgg 336
           ||||||||
Sbjct: 499 tatggtgg 506

---

>gb|U31462.1|LSU31462 Lactuca sativa violaxanthin de-epoxidase (VDE1) precursor, mRNA,
            complete cds
          Length = 1760

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 109/134 (81%)
 Strand = Plus / Plus

                                                                        
Query: 203  tataaccatgacaacgagtatctgcactatcaggatgactggtacattctctcatcgaaa 262
            ||||| |||||||| |||| ||| ||||| || ||||||||||||||  | || ||  ||
Sbjct: 1102 tataatcatgacaatgagtttcttcactaccaagatgactggtacatattatcttcccaa 1161

                                                                        
Query: 263  atagagaacaaggaagatgactacatatttgtatactaccgtggaagaaatgacgcatgg 322
            || || |||||    ||||| |||||||| ||||||||||| ||  |||| |||||||||
Sbjct: 1162 atcgaaaacaaacccgatgattacatattcgtatactaccgaggtcgaaacgacgcatgg 1221

                          
Query: 323  gatggatatggtgg 336
            |||||||| |||||
Sbjct: 1222 gatggatacggtgg 1235

---

>gb|DQ306798.1| Hevea brasiliensis isolate SSH69 mRNA sequence
          Length = 676

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 104/128 (81%)
 Strand = Plus / Minus

                                                                       
Query: 209 catgacaacgagtatctgcactatcaggatgactggtacattctctcatcgaaaatagag 268
           ||||| || |||||||| ||||| || ||||||||||| ||| | ||||| ||| | || 
Sbjct: 609 catgataatgagtatcttcactaccaagatgactggtatattttgtcatccaaagttgaa 550

                                                                       
Query: 269 aacaaggaagatgactacatatttgtatactaccgtggaagaaatgacgcatgggatgga 328
           ||||    |||||| ||||||||||| |||||    || |||||||| ||||||||||||
Sbjct: 549 aacagtccagatgattacatatttgtgtactataagggcagaaatgatgcatgggatgga 490

                   
Query: 329 tatggtgg 336
           ||||||||
Sbjct: 489 tatggtgg 482

---

>gb|U34817.1|NTU34817 Nicotiana tabacum violaxanthin de-epoxidase precursor (TVDE1), mRNA,
            complete cds
          Length = 1589

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Plus

                                                              
Query: 308  agaaatgacgcatgggatggatatggtggcgctgttgtgtacacaagaag 357
            |||||||| ||||||||||||||||||||  ||||  | |||||||||||
Sbjct: 1041 agaaatgatgcatgggatggatatggtggttctgtactttacacaagaag 1090

---

>gb|AC006932.8|AC006932 Genomic sequence for Arabidopsis thaliana BAC T27G7 from chromosome I,
             complete sequence
          Length = 89479

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 61/74 (82%)
 Strand = Plus / Plus

                                                                         
Query: 5     tttaccggcaagtggtacatttcaagtggcctaaatcctacatttgacacgttcgattgc 64
             |||| ||| |||||||||||| |||||||| | ||||| || |||||  | ||||| |||
Sbjct: 89381 tttaacgggaagtggtacattacaagtggcttgaatccaacctttgatgccttcgactgc 89440

                           
Query: 65    cagcttcacgagtt 78
             ||||| || |||||
Sbjct: 89441 cagctgcatgagtt 89454

---

>emb|CR762396.8| Zebrafish DNA sequence from clone DKEY-262O12 in linkage group 1,
             complete sequence
          Length = 163635

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 279   atgactacatatttgtatact 299
             |||||||||||||||||||||
Sbjct: 55140 atgactacatatttgtatact 55120

---

>emb|Z72781.1|SCYGL259W S.cerevisiae chromosome VII reading frame ORF YGL259w
          Length = 4019

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 259  gaaaatagagaacaaggaaga 279
            |||||||||||||||||||||
Sbjct: 1306 gaaaatagagaacaaggaaga 1286

---

>emb|X94357.1|SCHRVIILT S.cerevisiae left telomeric region from chromosome VII
          Length = 39411

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 259  gaaaatagagaacaaggaaga 279
            |||||||||||||||||||||
Sbjct: 8396 gaaaatagagaacaaggaaga 8376

---

>emb|Z72782.1|SCYGL260W S.cerevisiae chromosome VII reading frame ORF YGL260w
          Length = 1817

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 259  gaaaatagagaacaaggaaga 279
            |||||||||||||||||||||
Sbjct: 1744 gaaaatagagaacaaggaaga 1724

---

>emb|CR391947.13| Zebrafish DNA sequence from clone DKEYP-88A4 in linkage group 1,
             complete sequence
          Length = 167207

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 279   atgactacatatttgtatact 299
             |||||||||||||||||||||
Sbjct: 75236 atgactacatatttgtatact 75216

---

>emb|Z81033.1|CEC03C11 Caenorhabditis elegans Cosmid C03C11, complete sequence
          Length = 19170

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 498  agaaaggggagaagctcatc 517
            ||||||||||||||||||||
Sbjct: 8099 agaaaggggagaagctcatc 8118

---

>emb|AL929561.5| Human DNA sequence from clone DAQB-117O11 on chromosome 6 Contains the
              KRT18P1 pseudogene 1 for keratin 18, the HCG15 gene for the
              novel transcript HLA complex group 15, the HCG16 gene for
              the novel transcript HLA complex group 16, the ZNF311 gene
              for zinc finger protein 311, the OR2AD1P pseudogene for the
              olfactory receptor, family 2, subfamily AD, member 1, the
              OR2W1 gene for olfactory receptor, family 2, subfamily W,
              member 1, the OR2P1P pseudogene for olfactory receptor,
              family 2, subfamily P, member 1, the SARAP pseudogene for
              SAR1a gene homolog (S. cerevisiae), the OR2B3 gene for
              olfactory receptor, family 2, subfamily B, member 3, the
              OR2J1P pseudogene for olfactory receptor, family 2,
              subfamily J, member 1, the OR2J3 gene for olfactory
              receptor, family 2, subfamily J, member 3, the OR2N1P
              pseudogene for olfactory receptor, family 2, subfamily N,
              member 1 and 2 CpG islands, complete sequence
          Length = 181111

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 101    gttgcaaatttggcatggagaattccca 128
              ||||||||  ||||||||||||||||||
Sbjct: 168297 gttgcaaagatggcatggagaattccca 168270

---

>emb|BX248093.4| Human DNA sequence from clone DASS-357K17 on chromosome 6, complete
             sequence
          Length = 111633

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 101   gttgcaaatttggcatggagaattccca 128
             ||||||||  ||||||||||||||||||
Sbjct: 46133 gttgcaaagatggcatggagaattccca 46106

---

>emb|AL662852.9| Human DNA sequence from clone XXbac-228J24 on chromosome 6 contains the
             OR2P1P, OR2J1P, OR2N1P, OR2J4P pseudogenes for olfactory
             receptor, family 2, subfamily P, member 1, subfamily J,
             member 1, subfamily N, member 1, subfamily J, member 4,
             the OR2B3, OR2J3, OR2J2 gene for olfactory receptor,
             family 2, subfamily B, member 3, subfamily J, member 3,
             subfamily J member 2, a GTp-binding protein pseudogene and
             two CpG islands, complete sequence
          Length = 142562

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 101   gttgcaaatttggcatggagaattccca 128
             ||||||||  ||||||||||||||||||
Sbjct: 70293 gttgcaaagatggcatggagaattccca 70266

---

>emb|AL645937.6| Human DNA sequence from clone XXbac-171B11 on chromosome 6 contains the
             OR2J3 and OR2J2 genes for olfactory receptor, family 2,
             subfamily J, members 2 and 3, the OR2J1P, OR2N1P, OR2J4P,
             OR2H4P and OR2G1P pseudogenes for olfactory receptor,
             family 2, subfamily J, members 1 and 4, subfamily G,
             member 1, subfamily H, member 4 and subfamily N, member 1
             and two CpG islands, complete sequence
          Length = 147667

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 101   gttgcaaatttggcatggagaattccca 128
             ||||||||  ||||||||||||||||||
Sbjct: 33643 gttgcaaagatggcatggagaattccca 33616

---

>emb|BX294140.1| Pirellula sp. strain 1 complete genome; segment 8/24
          Length = 307050

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 56     ttcgattgccagcttcacga 75
              ||||||||||||||||||||
Sbjct: 300237 ttcgattgccagcttcacga 300218

---

>emb|AJ567484.1|LSA567484 Lactobacillus sakei gap operon (cggR, gap, pgk, tpi and eno genes)
          Length = 6315

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 61   ttgccagcttcacgagtttc 80
            ||||||||||||||||||||
Sbjct: 4073 ttgccagcttcacgagtttc 4054

---

>emb|CR774181.3| Human DNA sequence from clone DAAP-270H14 on chromosome 6, complete
            sequence
          Length = 52780

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 101  gttgcaaatttggcatggagaattccca 128
            ||||||||  ||||||||||||||||||
Sbjct: 6794 gttgcaaagatggcatggagaattccca 6767

---

>dbj|AB071869.1| Mesocricetus auratus CNX mRNA for calnexin, complete cds
          Length = 1782

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 422 ttctccacatttatcaggac 441
           ||||||||||||||||||||
Sbjct: 591 ttctccacatttatcaggac 572

---

>emb|BX927132.7| Human DNA sequence from clone DAMA-405I21 on chromosome 6, complete
             sequence
          Length = 93511

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 101   gttgcaaatttggcatggagaattccca 128
             ||||||||  ||||||||||||||||||
Sbjct: 13332 gttgcaaagatggcatggagaattccca 13305

---

>emb|CR388415.2| Human DNA sequence from clone DADB-150K7 on chromosome 6, complete
             sequence
          Length = 102196

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 101   gttgcaaatttggcatggagaattccca 128
             ||||||||  ||||||||||||||||||
Sbjct: 40271 gttgcaaagatggcatggagaattccca 40244

---

>gb|AC012361.10| Homo sapiens BAC clone RP11-348P18 from 2, complete sequence
          Length = 207184

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 358    caaggaattacctgagacaa 377
              ||||||||||||||||||||
Sbjct: 126570 caaggaattacctgagacaa 126589

---

>gb|AC134025.2| Homo sapiens 3 BAC RP11-231I13 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 183111

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 348    acacaagaagcaaggaatta 367
              ||||||||||||||||||||
Sbjct: 180733 acacaagaagcaaggaatta 180752

---

>emb|AL807734.7| Mouse DNA sequence from clone RP23-303N21 on chromosome X, complete
              sequence
          Length = 184303

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 261    aaatagagaacaaggaagat 280
              ||||||||||||||||||||
Sbjct: 168008 aaatagagaacaaggaagat 168027

---

>gb|AC158192.2| Selaginella moellendorffii clone JGIASXY-5N4, complete sequence
          Length = 37184

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 38/44 (86%)
 Strand = Plus / Plus

                                                         
Query: 296   tactaccgtggaagaaatgacgcatgggatggatatggtggcgc 339
             |||||||| |||  ||| || |||||||| ||||||||||||||
Sbjct: 22797 tactaccgaggatcaaacgatgcatgggacggatatggtggcgc 22840

---

>emb|CR936503.1| Lactobacillus sakei strain 23K complete genome
          Length = 1884661

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 61     ttgccagcttcacgagtttc 80
              ||||||||||||||||||||
Sbjct: 609471 ttgccagcttcacgagtttc 609452

---

>gb|AE000782.1| Archaeoglobus fulgidus DSM 4304, complete genome
          Length = 2178400

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 88     gggagacaggcttgttgcaa 107
              ||||||||||||||||||||
Sbjct: 436158 gggagacaggcttgttgcaa 436139

---

>emb|AL929471.16| Mouse DNA sequence from clone RP23-289F24 on chromosome 4, complete
             sequence
          Length = 146547

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 506   gagaagctcatcgttgatga 525
             ||||||||||||||||||||
Sbjct: 25533 gagaagctcatcgttgatga 25552

---

>emb|AL022727.1|HS80I19 Human DNA sequence from clone RP1-80I19 on chromosome 6p21.31-22.2
             Contains OR2B3, OR2J3 and OR2J2 genes for olfactory
             receptors 2B3, 2J3 and 2J2 and olfactory receptor 2J1,
             2N1, 2J4, and 2H4 pseudogenes OR2J1P, OR2N1P, OR2J4P and
             OR2H4P. Contains STSs, GSSs and two CpG islands, complete
             sequence
          Length = 144868

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 101   gttgcaaatttggcatggagaattccca 128
             ||||||||  ||||||||||||||||||
Sbjct: 52697 gttgcaaagatggcatggagaattccca 52670

---

>emb|AL445384.3|CNS07ED0 Human chromosome 14 DNA sequence BAC R-460A13 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 160750

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 524    gaggtaaaggagatcgaaggggag 547
              |||||||||||||| |||||||||
Sbjct: 113372 gaggtaaaggagatagaaggggag 113395


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,312,294
Number of Sequences: 3902068
Number of extensions: 4312294
Number of successful extensions: 72279
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 52
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 72107
Number of HSP's gapped (non-prelim): 146
length of query: 556
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 533
effective length of database: 17,143,297,704
effective search space: 9137377676232
effective search space used: 9137377676232
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

---