ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags18f07 |
|---|---|
| Clone Library Name | barley_pub |
>MSP1_YEAST (P28737) Protein MSP1 (TAT-binding homolog 4)| Length = 362 Score = 97.8 bits (242), Expect = 2e-20 Identities = 46/95 (48%), Positives = 67/95 (70%) Frame = +2 Query: 281 TENEFEKRLLADVIPPNDIGVTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCK 460 T + +E+ +L+ ++ P++I +TF DIG L+ + L E V+ PL PE++ L + Sbjct: 68 TLDAYERTILSSIVTPDEINITFQDIGGLDPLISDLHESVIYPLMMPEVYSNSPLLQAPS 127 Query: 461 GILLFGPPGTGKTMLAKAVATEAGANFINISMSSI 565 G+LL+GPPG GKTMLAKA+A E+GANFI+I MSSI Sbjct: 128 GVLLYGPPGCGKTMLAKALAKESGANFISIRMSSI 162
>SAV_SULAC (Q07590) SAV protein| Length = 780 Score = 93.6 bits (231), Expect = 4e-19 Identities = 48/70 (68%), Positives = 57/70 (81%) Frame = +2 Query: 341 VTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVA 520 V ++DIG L+NVK+ L+E V PL+ PELF K +T P KGILLFGPPGTGKTMLAKAVA Sbjct: 484 VNWNDIGGLDNVKQQLREAVEWPLRFPELFTKSGVTPP-KGILLFGPPGTGKTMLAKAVA 542 Query: 521 TEAGANFINI 550 TE+GANFI + Sbjct: 543 TESGANFIAV 552 Score = 77.0 bits (188), Expect = 3e-14 Identities = 37/71 (52%), Positives = 54/71 (76%) Frame = +2 Query: 341 VTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVA 520 V+++DIG LE K+ ++E+V P++ PELF + + P KGILL+GPPGTGKT+LA+A+A Sbjct: 209 VSWEDIGDLEEAKQKIREIVEWPMRHPELFQRLGIDPP-KGILLYGPPGTGKTLLARALA 267 Query: 521 TEAGANFINIS 553 E GA FI ++ Sbjct: 268 NEIGAYFITVN 278
>VPS4_SCHPO (Q09803) Suppressor protein of bem1/bed5 double mutants| Length = 432 Score = 91.7 bits (226), Expect = 1e-18 Identities = 46/75 (61%), Positives = 57/75 (76%) Frame = +2 Query: 341 VTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVA 520 V +DDI LEN KE LKE V+LP++ P+LF G+ KP GILL+GPPGTGK+ LAKAVA Sbjct: 126 VRWDDIAGLENAKEALKETVLLPIKLPQLFSHGR--KPWSGILLYGPPGTGKSYLAKAVA 183 Query: 521 TEAGANFINISMSSI 565 TEAG+ F +IS S + Sbjct: 184 TEAGSTFFSISSSDL 198
>ATAD1_RAT (Q505J9) ATPase family AAA domain-containing protein 1| Length = 361 Score = 88.6 bits (218), Expect = 1e-17 Identities = 41/93 (44%), Positives = 65/93 (69%) Frame = +2 Query: 287 NEFEKRLLADVIPPNDIGVTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGI 466 +E+E + A ++ P ++ VT+ DI L++V LK+ V+LP+++ LF +L +P KG+ Sbjct: 70 SEYEMSIAAHLVDPLNMHVTWSDIAGLDDVITDLKDTVILPIKKKHLFENSRLLQPPKGV 129 Query: 467 LLFGPPGTGKTMLAKAVATEAGANFINISMSSI 565 LL+GPPG GKT++AKA A EAG FIN+ S++ Sbjct: 130 LLYGPPGCGKTLIAKATAKEAGCRFINLQPSTL 162
>ATAD1_MOUSE (Q9D5T0) ATPase family AAA domain-containing protein 1| Length = 361 Score = 88.6 bits (218), Expect = 1e-17 Identities = 41/93 (44%), Positives = 65/93 (69%) Frame = +2 Query: 287 NEFEKRLLADVIPPNDIGVTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGI 466 +E+E + A ++ P ++ VT+ DI L++V LK+ V+LP+++ LF +L +P KG+ Sbjct: 70 SEYEMSIAAHLVDPLNMHVTWSDIAGLDDVITDLKDTVILPIKKKHLFENSRLLQPPKGV 129 Query: 467 LLFGPPGTGKTMLAKAVATEAGANFINISMSSI 565 LL+GPPG GKT++AKA A EAG FIN+ S++ Sbjct: 130 LLYGPPGCGKTLIAKATAKEAGCRFINLQPSTL 162
>ATAD1_HUMAN (Q8NBU5) ATPase family AAA domain-containing protein 1| Length = 361 Score = 88.6 bits (218), Expect = 1e-17 Identities = 41/93 (44%), Positives = 65/93 (69%) Frame = +2 Query: 287 NEFEKRLLADVIPPNDIGVTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGI 466 +E+E + A ++ P ++ VT+ DI L++V LK+ V+LP+++ LF +L +P KG+ Sbjct: 70 SEYEMSIAAHLVDPLNMHVTWSDIAGLDDVITDLKDTVILPIKKKHLFENSRLLQPPKGV 129 Query: 467 LLFGPPGTGKTMLAKAVATEAGANFINISMSSI 565 LL+GPPG GKT++AKA A EAG FIN+ S++ Sbjct: 130 LLYGPPGCGKTLIAKATAKEAGCRFINLQPSTL 162
>PEX6_NEUCR (Q7SGP2) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 1381 Score = 88.2 bits (217), Expect = 1e-17 Identities = 48/97 (49%), Positives = 63/97 (64%), Gaps = 7/97 (7%) Frame = +2 Query: 281 TENEFE------KRLLADVI-PPNDIGVTFDDIGALENVKETLKELVMLPLQRPELFCKG 439 T+ +FE ++ AD I P VT+DD+G L NVK+ + E + LPL+RPELF KG Sbjct: 961 TKQDFELAVDAARKNFADSIGAPKIPNVTWDDVGGLGNVKDAITETIQLPLERPELFAKG 1020 Query: 440 QLTKPCKGILLFGPPGTGKTMLAKAVATEAGANFINI 550 K GIL +GPPGTGKT+LAKA+ATE NF ++ Sbjct: 1021 M--KKRSGILFYGPPGTGKTLLAKAIATEYSLNFFSV 1055
>SPAST_MOUSE (Q9QYY8) Spastin| Length = 614 Score = 88.2 bits (217), Expect = 1e-17 Identities = 47/87 (54%), Positives = 58/87 (66%) Frame = +2 Query: 305 LLADVIPPNDIGVTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPP 484 L+ + I N V FDDI E K+ L+E+V+LP RPELF L P +G+LLFGPP Sbjct: 325 LIMNEIVDNGTAVKFDDIAGQELAKQALQEIVILPSLRPELFTG--LRAPARGLLLFGPP 382 Query: 485 GTGKTMLAKAVATEAGANFINISMSSI 565 G GKTMLAKAVA E+ A F NIS +S+ Sbjct: 383 GNGKTMLAKAVAAESNATFFNISAASL 409
>PEX6_GLOLA (Q9C1E9) Peroxisomal biogenesis factor 6 (Peroxin-6) (ClaPEX6)| Length = 1388 Score = 87.8 bits (216), Expect = 2e-17 Identities = 42/75 (56%), Positives = 53/75 (70%) Frame = +2 Query: 326 PNDIGVTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTML 505 P VT+DD+G L NVK+ + E + LPL+RPELF KG K GIL +GPPGTGKT+L Sbjct: 986 PKIPNVTWDDVGGLNNVKDAVTETIQLPLERPELFAKGM--KKRSGILFYGPPGTGKTLL 1043 Query: 506 AKAVATEAGANFINI 550 AKA+ATE NF ++ Sbjct: 1044 AKAIATEYSLNFFSV 1058
>SPAST_HUMAN (Q9UBP0) Spastin| Length = 616 Score = 87.0 bits (214), Expect = 3e-17 Identities = 46/87 (52%), Positives = 58/87 (66%) Frame = +2 Query: 305 LLADVIPPNDIGVTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPP 484 L+ + I N V FDDI + K+ L+E+V+LP RPELF L P +G+LLFGPP Sbjct: 327 LIMNEIVDNGTAVKFDDIAGQDLAKQALQEIVILPSLRPELFTG--LRAPARGLLLFGPP 384 Query: 485 GTGKTMLAKAVATEAGANFINISMSSI 565 G GKTMLAKAVA E+ A F NIS +S+ Sbjct: 385 GNGKTMLAKAVAAESNATFFNISAASL 411
>SAP1_YEAST (P39955) Protein SAP1| Length = 897 Score = 86.7 bits (213), Expect = 4e-17 Identities = 47/94 (50%), Positives = 68/94 (72%) Frame = +2 Query: 284 ENEFEKRLLADVIPPNDIGVTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKG 463 + + K++ A+++ D V +DDI LE+ K +LKE V+ P RP+LF +G L +P +G Sbjct: 584 DRQAAKQIFAEIVVHGD-EVHWDDIAGLESAKYSLKEAVVYPFLRPDLF-RG-LREPVRG 640 Query: 464 ILLFGPPGTGKTMLAKAVATEAGANFINISMSSI 565 +LLFGPPGTGKTMLA+AVATE+ + F +IS SS+ Sbjct: 641 MLLFGPPGTGKTMLARAVATESHSTFFSISASSL 674
>VAT_THEAC (O05209) VCP-like ATPase| Length = 745 Score = 86.7 bits (213), Expect = 4e-17 Identities = 50/100 (50%), Positives = 67/100 (67%), Gaps = 8/100 (8%) Frame = +2 Query: 275 VATENEFEKRLLADVIPPNDI--------GVTFDDIGALENVKETLKELVMLPLQRPELF 430 V TE++F+ L + I P+ + V +DDIG LE+VK +KE V LPL +P++F Sbjct: 436 VVTEDDFKNALKS--IEPSSLREVMVEVPNVHWDDIGGLEDVKREIKETVELPLLKPDVF 493 Query: 431 CKGQLTKPCKGILLFGPPGTGKTMLAKAVATEAGANFINI 550 K +P KG LL+GPPG GKT+LAKAVATE+ ANFI+I Sbjct: 494 -KRLGIRPSKGFLLYGPPGVGKTLLAKAVATESNANFISI 532 Score = 79.0 bits (193), Expect = 9e-15 Identities = 35/71 (49%), Positives = 56/71 (78%) Frame = +2 Query: 341 VTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVA 520 ++++DIG L ++E++ LPL+ PELF + +T P KG++L+GPPGTGKT++A+AVA Sbjct: 187 ISYEDIGGLSEQLGKIREMIELPLKHPELFERLGITPP-KGVILYGPPGTGKTLIARAVA 245 Query: 521 TEAGANFINIS 553 E+GANF++I+ Sbjct: 246 NESGANFLSIN 256
>PEX6_PENCH (Q9HG03) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 1459 Score = 86.3 bits (212), Expect = 6e-17 Identities = 46/88 (52%), Positives = 58/88 (65%), Gaps = 1/88 (1%) Frame = +2 Query: 290 EFEKRLLADVI-PPNDIGVTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGI 466 E ++ AD I P V +DD+G L NVK+ L E + LPL+RPELF KG K GI Sbjct: 1009 EAARKNFADSIGAPKIPNVGWDDVGGLTNVKDALVETIQLPLERPELFAKGM--KKRSGI 1066 Query: 467 LLFGPPGTGKTMLAKAVATEAGANFINI 550 L +GPPGTGKT+LAKA+ATE NF ++ Sbjct: 1067 LFYGPPGTGKTLLAKAIATEFSLNFFSV 1094
>ATD1B_BRARE (Q503W7) ATPase family AAA domain-containing protein 1-B| Length = 362 Score = 86.3 bits (212), Expect = 6e-17 Identities = 41/93 (44%), Positives = 63/93 (67%) Frame = +2 Query: 287 NEFEKRLLADVIPPNDIGVTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGI 466 +E+E + A ++ P + +T+ DI L+ V LK+ V+LP+Q+ LF +L +P KG+ Sbjct: 74 SEYEMSIAAHLVDPLTMQITWHDIAGLDEVITELKDTVILPIQKRHLFEGSRLLQPPKGV 133 Query: 467 LLFGPPGTGKTMLAKAVATEAGANFINISMSSI 565 LL+GPPG GKT++AKA A EAG FIN+ S++ Sbjct: 134 LLYGPPGCGKTLIAKATAKEAGFRFINLQPSTL 166
>CDC48_YEAST (P25694) Cell division control protein 48| Length = 835 Score = 85.1 bits (209), Expect = 1e-16 Identities = 40/72 (55%), Positives = 54/72 (75%) Frame = +2 Query: 335 IGVTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKA 514 + VT+DD+G L+ +KE LKE V P+ P+ + K L+ P KG+L +GPPGTGKT+LAKA Sbjct: 482 VNVTWDDVGGLDEIKEELKETVEYPVLHPDQYTKFGLS-PSKGVLFYGPPGTGKTLLAKA 540 Query: 515 VATEAGANFINI 550 VATE ANFI++ Sbjct: 541 VATEVSANFISV 552 Score = 71.6 bits (174), Expect = 1e-12 Identities = 36/75 (48%), Positives = 52/75 (69%) Frame = +2 Query: 329 NDIGVTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLA 508 N++G +DDIG ++E+V LPL+ P+LF K KP +G+L++GPPGTGKT++A Sbjct: 209 NEVG--YDDIGGCRKQMAQIREMVELPLRHPQLF-KAIGIKPPRGVLMYGPPGTGKTLMA 265 Query: 509 KAVATEAGANFINIS 553 +AVA E GA F I+ Sbjct: 266 RAVANETGAFFFLIN 280
>TBP6_YEAST (P40328) Probable 26S protease subunit YTA6 (TAT-binding homolog 6)| Length = 754 Score = 84.7 bits (208), Expect = 2e-16 Identities = 44/78 (56%), Positives = 58/78 (74%) Frame = +2 Query: 332 DIGVTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAK 511 D V ++DI L N K +LKE V+ P RP+LF KG L +P +G+LLFGPPGTGKTM+AK Sbjct: 465 DEKVYWEDIAGLRNAKNSLKEAVVYPFLRPDLF-KG-LREPVRGMLLFGPPGTGKTMIAK 522 Query: 512 AVATEAGANFINISMSSI 565 AVATE+ + F ++S SS+ Sbjct: 523 AVATESNSTFFSVSASSL 540
>KATL1_HUMAN (Q9BW62) Katanin p60 ATPase-containing subunit A-like 1 (EC| 3.6.4.3) (Katanin p60 subunit A-like 1) (p60 katanin-like 1) Length = 490 Score = 84.0 bits (206), Expect = 3e-16 Identities = 44/94 (46%), Positives = 63/94 (67%) Frame = +2 Query: 284 ENEFEKRLLADVIPPNDIGVTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKG 463 + + + L D++ N + +DDI LE K+ L+E V+LP+ P+ F KG + +P KG Sbjct: 187 DKDLVEALERDIVSRNP-SIHWDDIADLEEAKKLLREAVVLPMWMPDFF-KG-IRRPWKG 243 Query: 464 ILLFGPPGTGKTMLAKAVATEAGANFINISMSSI 565 +L+ GPPGTGKTMLAKAVATE G F N+S S++ Sbjct: 244 VLMVGPPGTGKTMLAKAVATECGTTFFNVSSSTL 277
>KATL1_RAT (Q5XIK7) Katanin p60 ATPase-containing subunit A-like 1 (EC| 3.6.4.3) (Katanin p60 subunit A-like 1) (p60 katanin-like 1) Length = 488 Score = 84.0 bits (206), Expect = 3e-16 Identities = 44/94 (46%), Positives = 63/94 (67%) Frame = +2 Query: 284 ENEFEKRLLADVIPPNDIGVTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKG 463 + + + L D++ N + +DDI LE K+ L+E V+LP+ P+ F KG + +P KG Sbjct: 185 DKDLVEALERDIVSRNP-SIHWDDIADLEEAKKLLREAVVLPMWMPDFF-KG-IRRPWKG 241 Query: 464 ILLFGPPGTGKTMLAKAVATEAGANFINISMSSI 565 +L+ GPPGTGKTMLAKAVATE G F N+S S++ Sbjct: 242 VLMVGPPGTGKTMLAKAVATECGTTFFNVSSSTL 275
>KATL1_MOUSE (Q8K0T4) Katanin p60 ATPase-containing subunit A-like 1 (EC| 3.6.4.3) (Katanin p60 subunit A-like 1) (p60 katanin-like 1) Length = 488 Score = 84.0 bits (206), Expect = 3e-16 Identities = 44/94 (46%), Positives = 63/94 (67%) Frame = +2 Query: 284 ENEFEKRLLADVIPPNDIGVTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKG 463 + + + L D++ N + +DDI LE K+ L+E V+LP+ P+ F KG + +P KG Sbjct: 185 DKDLVEALERDIVSRNP-SIHWDDIADLEEAKKLLREAVVLPMWMPDFF-KG-IRRPWKG 241 Query: 464 ILLFGPPGTGKTMLAKAVATEAGANFINISMSSI 565 +L+ GPPGTGKTMLAKAVATE G F N+S S++ Sbjct: 242 VLMVGPPGTGKTMLAKAVATECGTTFFNVSSSTL 275
>KTNA1_ARATH (Q9SEX2) Katanin p60 ATPase-containing subunit (EC 3.6.4.3)| (Katanin p60 subunit) (p60 katanin) (Atp60) (CAD ATPase) (Katanin 1) (BOTERO1 protein) (ECTOPIC ROOT HAIR 3 protein) (FAT ROOT protein) (FRAGILE FIBER 2 protein) (AtAAA1) Length = 523 Score = 83.6 bits (205), Expect = 4e-16 Identities = 40/76 (52%), Positives = 53/76 (69%) Frame = +2 Query: 338 GVTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAV 517 GV +DD+ L K L+E V+LPL PE F + +P KG+L+FGPPGTGKT+LAKAV Sbjct: 235 GVRWDDVAGLSEAKRLLEEAVVLPLWMPEYF--QGIRRPWKGVLMFGPPGTGKTLLAKAV 292 Query: 518 ATEAGANFINISMSSI 565 ATE G F N+S +++ Sbjct: 293 ATECGTTFFNVSSATL 308
>KTNA1_XENLA (Q9PUL2) Katanin p60 ATPase-containing subunit (EC 3.6.4.3)| (Katanin p60 subunit) (p60 katanin) (Fragment) Length = 486 Score = 83.2 bits (204), Expect = 5e-16 Identities = 46/94 (48%), Positives = 62/94 (65%) Frame = +2 Query: 284 ENEFEKRLLADVIPPNDIGVTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKG 463 + + + L D+I N + +DDI LE K+ LKE V+LP+ PE F KG + +P KG Sbjct: 185 DKDLIEALERDIISQNP-NIRWDDIADLEEAKKLLKEAVVLPMWMPEFF-KG-IRRPWKG 241 Query: 464 ILLFGPPGTGKTMLAKAVATEAGANFINISMSSI 565 +L+ GPPGTGKT+LAKAVATE F NIS S++ Sbjct: 242 VLMVGPPGTGKTLLAKAVATECKTTFFNISSSTL 275
>PEX6_SCHPO (O13764) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 948 Score = 83.2 bits (204), Expect = 5e-16 Identities = 41/70 (58%), Positives = 51/70 (72%) Frame = +2 Query: 341 VTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVA 520 V +DDIG LE K L++ + LPLQ PELF +G KP G+LL+GPPGTGKT+LAKAVA Sbjct: 652 VNWDDIGGLEEAKTVLRDTLQLPLQFPELFSQG--LKPRSGVLLYGPPGTGKTLLAKAVA 709 Query: 521 TEAGANFINI 550 TE F++I Sbjct: 710 TELSLEFVSI 719
>TERA_XENLA (P23787) Transitional endoplasmic reticulum ATPase (TER ATPase)| (15S Mg(2+)-ATPase p97 subunit) Length = 805 Score = 82.4 bits (202), Expect = 8e-16 Identities = 40/70 (57%), Positives = 53/70 (75%) Frame = +2 Query: 341 VTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVA 520 VT++DIG LE+VK L+ELV P++ P+ F K +T P KG+L +GPPG GKT+LAKA+A Sbjct: 474 VTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMT-PSKGVLFYGPPGCGKTLLAKAIA 532 Query: 521 TEAGANFINI 550 E ANFI+I Sbjct: 533 NECQANFISI 542 Score = 72.8 bits (177), Expect = 6e-13 Identities = 39/75 (52%), Positives = 51/75 (68%) Frame = +2 Query: 329 NDIGVTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLA 508 N++G +DDIG +KE+V LPL+ P LF K KP +GILL+GPPGTGKT++A Sbjct: 199 NEVG--YDDIGGCRKQLAQIKEMVELPLRHPALF-KAIGVKPPRGILLYGPPGTGKTLIA 255 Query: 509 KAVATEAGANFINIS 553 +AVA E GA F I+ Sbjct: 256 RAVANETGAFFFLIN 270
>TERA_RAT (P46462) Transitional endoplasmic reticulum ATPase (TER ATPase)| (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP) Length = 805 Score = 82.4 bits (202), Expect = 8e-16 Identities = 40/70 (57%), Positives = 53/70 (75%) Frame = +2 Query: 341 VTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVA 520 VT++DIG LE+VK L+ELV P++ P+ F K +T P KG+L +GPPG GKT+LAKA+A Sbjct: 473 VTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMT-PSKGVLFYGPPGCGKTLLAKAIA 531 Query: 521 TEAGANFINI 550 E ANFI+I Sbjct: 532 NECQANFISI 541 Score = 72.8 bits (177), Expect = 6e-13 Identities = 39/75 (52%), Positives = 51/75 (68%) Frame = +2 Query: 329 NDIGVTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLA 508 N++G +DDIG +KE+V LPL+ P LF K KP +GILL+GPPGTGKT++A Sbjct: 198 NEVG--YDDIGGCRKQLAQIKEMVELPLRHPALF-KAIGVKPPRGILLYGPPGTGKTLIA 254 Query: 509 KAVATEAGANFINIS 553 +AVA E GA F I+ Sbjct: 255 RAVANETGAFFFLIN 269
>TERA_MOUSE (Q01853) Transitional endoplasmic reticulum ATPase (TER ATPase)| (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP) Length = 805 Score = 82.4 bits (202), Expect = 8e-16 Identities = 40/70 (57%), Positives = 53/70 (75%) Frame = +2 Query: 341 VTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVA 520 VT++DIG LE+VK L+ELV P++ P+ F K +T P KG+L +GPPG GKT+LAKA+A Sbjct: 473 VTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMT-PSKGVLFYGPPGCGKTLLAKAIA 531 Query: 521 TEAGANFINI 550 E ANFI+I Sbjct: 532 NECQANFISI 541 Score = 72.4 bits (176), Expect = 8e-13 Identities = 38/75 (50%), Positives = 51/75 (68%) Frame = +2 Query: 329 NDIGVTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLA 508 N++G +DD+G +KE+V LPL+ P LF K KP +GILL+GPPGTGKT++A Sbjct: 198 NEVG--YDDVGGCRKQLAQIKEMVELPLRHPALF-KAIGVKPPRGILLYGPPGTGKTLIA 254 Query: 509 KAVATEAGANFINIS 553 +AVA E GA F I+ Sbjct: 255 RAVANETGAFFFLIN 269
>TERA_HUMAN (P55072) Transitional endoplasmic reticulum ATPase (TER ATPase)| (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP) Length = 805 Score = 82.4 bits (202), Expect = 8e-16 Identities = 40/70 (57%), Positives = 53/70 (75%) Frame = +2 Query: 341 VTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVA 520 VT++DIG LE+VK L+ELV P++ P+ F K +T P KG+L +GPPG GKT+LAKA+A Sbjct: 473 VTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMT-PSKGVLFYGPPGCGKTLLAKAIA 531 Query: 521 TEAGANFINI 550 E ANFI+I Sbjct: 532 NECQANFISI 541 Score = 72.8 bits (177), Expect = 6e-13 Identities = 39/75 (52%), Positives = 51/75 (68%) Frame = +2 Query: 329 NDIGVTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLA 508 N++G +DDIG +KE+V LPL+ P LF K KP +GILL+GPPGTGKT++A Sbjct: 198 NEVG--YDDIGGCRKQLAQIKEMVELPLRHPALF-KAIGVKPPRGILLYGPPGTGKTLIA 254 Query: 509 KAVATEAGANFINIS 553 +AVA E GA F I+ Sbjct: 255 RAVANETGAFFFLIN 269
>VPS4_YEAST (P52917) Vacuolar protein sorting-associated protein VPS4 (END13| protein) (DOA4-independent degradation protein 6) Length = 437 Score = 82.0 bits (201), Expect = 1e-15 Identities = 45/94 (47%), Positives = 61/94 (64%) Frame = +2 Query: 284 ENEFEKRLLADVIPPNDIGVTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKG 463 +N+ + L+ I V ++D+ LE KE LKE V+LP++ P LF KG KP G Sbjct: 111 DNKKLRGALSSAILSEKPNVKWEDVAGLEGAKEALKEAVILPVKFPHLF-KGN-RKPTSG 168 Query: 464 ILLFGPPGTGKTMLAKAVATEAGANFINISMSSI 565 ILL+GPPGTGK+ LAKAVATEA + F ++S S + Sbjct: 169 ILLYGPPGTGKSYLAKAVATEANSTFFSVSSSDL 202
>Y1156_METJA (Q58556) Cell division cycle protein 48 homolog MJ1156| Length = 903 Score = 82.0 bits (201), Expect = 1e-15 Identities = 42/70 (60%), Positives = 55/70 (78%) Frame = +2 Query: 341 VTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVA 520 V ++DIG LE VK+ L+E V PL+ E+F K + +P KG+LLFGPPGTGKT+LAKAVA Sbjct: 449 VKWEDIGGLEEVKQELREAVEWPLKAKEVFEKIGV-RPPKGVLLFGPPGTGKTLLAKAVA 507 Query: 521 TEAGANFINI 550 E+GANFI++ Sbjct: 508 NESGANFISV 517 Score = 80.1 bits (196), Expect = 4e-15 Identities = 42/91 (46%), Positives = 62/91 (68%) Frame = +2 Query: 281 TENEFEKRLLADVIPPNDIGVTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCK 460 T E ++ ++++ VT++DIG L+ + ++E++ LP++ PELF K + P K Sbjct: 156 THVELKEEPVSEIKETKVPDVTYEDIGGLKEEVKKVREMIELPMRHPELFEKLGIEPP-K 214 Query: 461 GILLFGPPGTGKTMLAKAVATEAGANFINIS 553 G+LL GPPGTGKT+LAKAVA EAGANF I+ Sbjct: 215 GVLLVGPPGTGKTLLAKAVANEAGANFYVIN 245
>ATD1A_BRARE (Q7ZZ25) ATPase family AAA domain-containing protein 1-A| Length = 380 Score = 81.6 bits (200), Expect = 1e-15 Identities = 36/92 (39%), Positives = 59/92 (64%) Frame = +2 Query: 290 EFEKRLLADVIPPNDIGVTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGIL 469 E+E + ++ P I VT+ D+ L+ + +++ V+LP Q+ LF +L +P KG+L Sbjct: 74 EYEMNIATLLVDPRSIKVTWRDVAGLDEIISEMQDTVILPFQKRHLFSGSKLLQPPKGVL 133 Query: 470 LFGPPGTGKTMLAKAVATEAGANFINISMSSI 565 L+GPPG GKT++AKA A +G FIN+ S++ Sbjct: 134 LYGPPGCGKTLIAKATAKASGCRFINLQASTL 165
>PSMR_METJA (Q58576) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 430 Score = 81.6 bits (200), Expect = 1e-15 Identities = 42/75 (56%), Positives = 54/75 (72%) Frame = +2 Query: 341 VTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVA 520 V ++DIG LE + ++E+V LPL+ PELF K + P KGILL+GPPGTGKT+LAKAVA Sbjct: 167 VRYEDIGGLEKQMQEIREVVELPLKHPELFEKVGIEPP-KGILLYGPPGTGKTLLAKAVA 225 Query: 521 TEAGANFINISMSSI 565 TE A FI + S + Sbjct: 226 TETNATFIRVVGSEL 240
>TERA_PIG (P03974) Transitional endoplasmic reticulum ATPase (TER ATPase)| (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP) Length = 805 Score = 81.3 bits (199), Expect = 2e-15 Identities = 39/70 (55%), Positives = 53/70 (75%) Frame = +2 Query: 341 VTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVA 520 VT++DIG LE+VK L++LV P++ P+ F K +T P KG+L +GPPG GKT+LAKA+A Sbjct: 473 VTWEDIGGLEDVKRELQDLVQYPVEHPDKFLKFGMT-PSKGVLFYGPPGCGKTLLAKAIA 531 Query: 521 TEAGANFINI 550 E ANFI+I Sbjct: 532 NECQANFISI 541 Score = 72.8 bits (177), Expect = 6e-13 Identities = 39/75 (52%), Positives = 51/75 (68%) Frame = +2 Query: 329 NDIGVTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLA 508 N++G +DDIG +KE+V LPL+ P LF K KP +GILL+GPPGTGKT++A Sbjct: 198 NEVG--YDDIGGCRKQLAQIKEMVELPLRHPALF-KAIGVKPPRGILLYGPPGTGKTLIA 254 Query: 509 KAVATEAGANFINIS 553 +AVA E GA F I+ Sbjct: 255 RAVANETGAFFFLIN 269
>Y1297_ARCFU (O28972) Cell division cycle protein 48 homolog AF1297| Length = 733 Score = 81.3 bits (199), Expect = 2e-15 Identities = 41/70 (58%), Positives = 53/70 (75%) Frame = +2 Query: 341 VTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVA 520 V ++DIG LE+ K+ L E V PL+ PE+F + KP +GILLFGPPGTGKT+LAKAVA Sbjct: 452 VKWEDIGGLEHAKQELMEAVEWPLKYPEVFRAANI-KPPRGILLFGPPGTGKTLLAKAVA 510 Query: 521 TEAGANFINI 550 E+ ANFI++ Sbjct: 511 NESNANFISV 520 Score = 77.4 bits (189), Expect = 3e-14 Identities = 38/71 (53%), Positives = 53/71 (74%) Frame = +2 Query: 341 VTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVA 520 VT++DIG L+ ++E++ LPL+ PELF + + P KG+LL+GPPGTGKT++AKAVA Sbjct: 179 VTYEDIGGLKRELRLVREMIELPLKHPELFQRLGIEPP-KGVLLYGPPGTGKTLIAKAVA 237 Query: 521 TEAGANFINIS 553 E A+FI IS Sbjct: 238 NEVDAHFIPIS 248
>KTNA1_HUMAN (O75449) Katanin p60 ATPase-containing subunit A1 (EC 3.6.4.3)| (Katanin p60 subunit A1) (p60 katanin) Length = 491 Score = 80.9 bits (198), Expect = 2e-15 Identities = 45/94 (47%), Positives = 61/94 (64%) Frame = +2 Query: 284 ENEFEKRLLADVIPPNDIGVTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKG 463 + + + L D+I N V +DDI L K+ LKE V+LP+ PE F KG + +P KG Sbjct: 188 DKDLVEALERDIISQNP-NVRWDDIADLVEAKKLLKEAVVLPMWMPEFF-KG-IRRPWKG 244 Query: 464 ILLFGPPGTGKTMLAKAVATEAGANFINISMSSI 565 +L+ GPPGTGKT+LAKAVATE F N+S S++ Sbjct: 245 VLMVGPPGTGKTLLAKAVATECKTTFFNVSSSTL 278
>PSMR_METMP (Q6LWR0) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 407 Score = 80.5 bits (197), Expect = 3e-15 Identities = 40/75 (53%), Positives = 54/75 (72%) Frame = +2 Query: 341 VTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVA 520 ++F+DIG L N +KE+V LPL+ PELF K + P KG+LL+GPPGTGKT+LAKAVA Sbjct: 145 ISFEDIGGLNNQIRDIKEVVELPLKNPELFEKVGIVPP-KGVLLYGPPGTGKTLLAKAVA 203 Query: 521 TEAGANFINISMSSI 565 E A+F+ + S + Sbjct: 204 YETNASFVRVVGSEL 218
>KTNA1_STRPU (O61577) Katanin p60 ATPase-containing subunit (EC 3.6.4.3)| (Katanin p60 subunit) (p60 katanin) Length = 516 Score = 79.7 bits (195), Expect = 5e-15 Identities = 44/94 (46%), Positives = 60/94 (63%) Frame = +2 Query: 284 ENEFEKRLLADVIPPNDIGVTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKG 463 + + + L D++ N V + DI L K L+E V+LPL P+ F KG + +P KG Sbjct: 213 DKDLVENLERDIVQRNP-NVHWADIAGLTEAKRLLEEAVVLPLWMPDYF-KG-IRRPWKG 269 Query: 464 ILLFGPPGTGKTMLAKAVATEAGANFINISMSSI 565 +L+ GPPGTGKTMLAKAVATE G F N+S +S+ Sbjct: 270 VLMVGPPGTGKTMLAKAVATECGTTFFNVSSASL 303
>CD48D_ARATH (Q9SCN8) Putative cell division control protein 48 homolog D| (AtCDC48d) (Transitional endoplasmic reticulum ATPase D) Length = 815 Score = 79.3 bits (194), Expect = 7e-15 Identities = 39/70 (55%), Positives = 52/70 (74%) Frame = +2 Query: 341 VTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVA 520 V+++DIG LENVK L+E V P++ PE F K ++ P KG+L +GPPG GKT+LAKA+A Sbjct: 478 VSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMS-PSKGVLFYGPPGCGKTLLAKAIA 536 Query: 521 TEAGANFINI 550 E ANFI+I Sbjct: 537 NECQANFISI 546 Score = 73.2 bits (178), Expect = 5e-13 Identities = 37/71 (52%), Positives = 50/71 (70%) Frame = +2 Query: 341 VTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVA 520 V +DD+G + ++ELV LPL+ P+LF K KP KGILL+GPPG+GKT++A+AVA Sbjct: 205 VGYDDVGGVRKQMAQIRELVELPLRHPQLF-KSIGVKPPKGILLYGPPGSGKTLIARAVA 263 Query: 521 TEAGANFINIS 553 E GA F I+ Sbjct: 264 NETGAFFFCIN 274
>CDC48_SOYBN (P54774) Cell division cycle protein 48 homolog (Valosin-containing| protein homolog) (VCP) Length = 807 Score = 79.0 bits (193), Expect = 9e-15 Identities = 38/70 (54%), Positives = 52/70 (74%) Frame = +2 Query: 341 VTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVA 520 V+++DIG LENVK L+E V P++ PE F K ++ P KG+L +GPPG GKT+LAKA+A Sbjct: 478 VSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMS-PSKGVLFYGPPGCGKTLLAKAIA 536 Query: 521 TEAGANFINI 550 E ANFI++ Sbjct: 537 NECQANFISV 546 Score = 73.2 bits (178), Expect = 5e-13 Identities = 37/71 (52%), Positives = 50/71 (70%) Frame = +2 Query: 341 VTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVA 520 V +DD+G + ++ELV LPL+ P+LF K KP KGILL+GPPG+GKT++A+AVA Sbjct: 205 VGYDDVGGVRKQMAQIRELVELPLRHPQLF-KSIGVKPPKGILLYGPPGSGKTLIARAVA 263 Query: 521 TEAGANFINIS 553 E GA F I+ Sbjct: 264 NETGAFFFCIN 274
>CD48E_ARATH (Q9LZF6) Cell division control protein 48 homolog E (AtCDC48e)| (Transitional endoplasmic reticulum ATPase E) Length = 810 Score = 79.0 bits (193), Expect = 9e-15 Identities = 38/70 (54%), Positives = 52/70 (74%) Frame = +2 Query: 341 VTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVA 520 V+++DIG LENVK L+E V P++ PE F K ++ P KG+L +GPPG GKT+LAKA+A Sbjct: 477 VSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMS-PSKGVLFYGPPGCGKTLLAKAIA 535 Query: 521 TEAGANFINI 550 E ANFI++ Sbjct: 536 NECQANFISV 545 Score = 73.2 bits (178), Expect = 5e-13 Identities = 37/71 (52%), Positives = 50/71 (70%) Frame = +2 Query: 341 VTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVA 520 V +DD+G + ++ELV LPL+ P+LF K KP KGILL+GPPG+GKT++A+AVA Sbjct: 204 VGYDDVGGVRKQMAQIRELVELPLRHPQLF-KSIGVKPPKGILLYGPPGSGKTLIARAVA 262 Query: 521 TEAGANFINIS 553 E GA F I+ Sbjct: 263 NETGAFFFCIN 273
>PEX6_CANGA (Q6FW67) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 1017 Score = 79.0 bits (193), Expect = 9e-15 Identities = 42/95 (44%), Positives = 59/95 (62%), Gaps = 3/95 (3%) Frame = +2 Query: 275 VATENEFEK---RLLADVIPPNDIGVTFDDIGALENVKETLKELVMLPLQRPELFCKGQL 445 ++ +N EK A + P+ VT+DD+G L +VK+ + E + LPL+ PELF G Sbjct: 690 ISIQNALEKVRSDYSASIGAPSIPNVTWDDVGGLSSVKDAIMETIDLPLKHPELFGSG-- 747 Query: 446 TKPCKGILLFGPPGTGKTMLAKAVATEAGANFINI 550 K GIL +GPPGTGKT+LAKA+AT NF ++ Sbjct: 748 LKKRSGILFYGPPGTGKTLLAKAIATNFSLNFFSV 782
>CDCH_HALSA (Q9HPF0) Protein cdcH| Length = 742 Score = 79.0 bits (193), Expect = 9e-15 Identities = 37/72 (51%), Positives = 55/72 (76%) Frame = +2 Query: 338 GVTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAV 517 G+T++DIG LEN + ++E+V LP++ P++F K + P +G+LL GPPGTGKT+LAKAV Sbjct: 185 GITYEDIGGLENEIQRVREMVELPMKHPQIFQKLGIEPP-QGVLLHGPPGTGKTLLAKAV 243 Query: 518 ATEAGANFINIS 553 A E A+F +I+ Sbjct: 244 ANETSASFFSIA 255 Score = 76.3 bits (186), Expect = 6e-14 Identities = 36/70 (51%), Positives = 49/70 (70%) Frame = +2 Query: 341 VTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVA 520 +T+DD+G L K +KE V PL +PE F + + P G+LL+GPPGTGKT++AKAVA Sbjct: 459 ITWDDVGGLTEAKNNVKESVEWPLNQPEKFTRMGVEPPA-GVLLYGPPGTGKTLMAKAVA 517 Query: 521 TEAGANFINI 550 E ANFI++ Sbjct: 518 NETNANFISV 527
>PRS10_YEAST (P53549) 26S protease subunit RPT4 (26S protease subunit SUG2)| (Proteasomal cap subunit) Length = 437 Score = 78.6 bits (192), Expect = 1e-14 Identities = 41/75 (54%), Positives = 52/75 (69%) Frame = +2 Query: 341 VTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVA 520 +TFD IG L L+E++ LPL+ PE+F + + KP KG+LL+GPPGTGKT+LAKAVA Sbjct: 178 ITFDGIGGLTEQIRELREVIELPLKNPEIFQRVGI-KPPKGVLLYGPPGTGKTLLAKAVA 236 Query: 521 TEAGANFINISMSSI 565 GANFI S I Sbjct: 237 ATIGANFIFSPASGI 251
>CD48A_ARATH (P54609) Cell division control protein 48 homolog A (AtCDC48a)| Length = 809 Score = 78.6 bits (192), Expect = 1e-14 Identities = 38/70 (54%), Positives = 52/70 (74%) Frame = +2 Query: 341 VTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVA 520 V+++DIG LENVK L+E V P++ PE F K ++ P KG+L +GPPG GKT+LAKA+A Sbjct: 477 VSWNDIGGLENVKRELQETVQYPVEHPEKFEKFGMS-PSKGVLFYGPPGCGKTLLAKAIA 535 Query: 521 TEAGANFINI 550 E ANFI++ Sbjct: 536 NECQANFISV 545 Score = 73.6 bits (179), Expect = 4e-13 Identities = 38/75 (50%), Positives = 53/75 (70%) Frame = +2 Query: 329 NDIGVTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLA 508 +D+G +DD+G + ++ELV LPL+ P+LF K KP KGILL+GPPG+GKT++A Sbjct: 202 DDVG--YDDVGGVRKQMAQIRELVELPLRHPQLF-KSIGVKPPKGILLYGPPGSGKTLIA 258 Query: 509 KAVATEAGANFINIS 553 +AVA E GA F I+ Sbjct: 259 RAVANETGAFFFCIN 273
>PSMR_SULSO (Q980M1) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 393 Score = 78.6 bits (192), Expect = 1e-14 Identities = 41/73 (56%), Positives = 54/73 (73%) Frame = +2 Query: 341 VTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVA 520 VT+ +IG LE L+E+V LPL+ PE+F + + P KG+LL+GPPGTGKTMLAKAVA Sbjct: 131 VTYSEIGGLEEQIRELREVVELPLKNPEIFREIGVEPP-KGVLLYGPPGTGKTMLAKAVA 189 Query: 521 TEAGANFINISMS 559 TE+ A FI++ S Sbjct: 190 TESNAVFIHVVAS 202
>CDC48_CAPAN (Q96372) Cell division cycle protein 48 homolog| Length = 805 Score = 78.2 bits (191), Expect = 2e-14 Identities = 38/70 (54%), Positives = 52/70 (74%) Frame = +2 Query: 341 VTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVA 520 V+++DIG LENVK L+E V P++ PE F K ++ P KG+L +GPPG GKT+LAKA+A Sbjct: 478 VSWEDIGGLENVKRELQETVQYPVEPPEKFEKFGMS-PSKGVLFYGPPGCGKTLLAKAIA 536 Query: 521 TEAGANFINI 550 E ANFI++ Sbjct: 537 NECQANFISV 546 Score = 73.2 bits (178), Expect = 5e-13 Identities = 37/71 (52%), Positives = 50/71 (70%) Frame = +2 Query: 341 VTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVA 520 V +DD+G + ++ELV LPL+ P+LF K KP KGILL+GPPG+GKT++A+AVA Sbjct: 205 VGYDDVGGVRKQMAQIRELVELPLRHPQLF-KSIGVKPPKGILLYGPPGSGKTLIARAVA 263 Query: 521 TEAGANFINIS 553 E GA F I+ Sbjct: 264 NETGAFFFCIN 274
>TERA2_CAEEL (P54812) Transitional endoplasmic reticulum ATPase homolog 2| (p97/CDC48 homolog 2) Length = 810 Score = 78.2 bits (191), Expect = 2e-14 Identities = 37/69 (53%), Positives = 51/69 (73%) Frame = +2 Query: 344 TFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVAT 523 T+ DIG L+NVK L+ELV P++ PE + K + +P +G+L +GPPG GKT+LAKA+A Sbjct: 480 TWSDIGGLQNVKRELQELVQYPVEHPEKYLKFGM-QPSRGVLFYGPPGCGKTLLAKAIAN 538 Query: 524 EAGANFINI 550 E ANFI+I Sbjct: 539 ECQANFISI 547 Score = 75.1 bits (183), Expect = 1e-13 Identities = 39/75 (52%), Positives = 53/75 (70%) Frame = +2 Query: 329 NDIGVTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLA 508 N++G +DD+G + +KE+V LPL+ P+LF K KP +GILLFGPPGTGKT++A Sbjct: 204 NEVG--YDDLGGVRKQLAQIKEMVELPLRHPQLF-KAIGVKPPRGILLFGPPGTGKTLIA 260 Query: 509 KAVATEAGANFINIS 553 +AVA E GA F I+ Sbjct: 261 RAVANETGAFFFLIN 275
>CDC48_SCHPO (Q9P3A7) Cell division cycle protein 48| Length = 815 Score = 78.2 bits (191), Expect = 2e-14 Identities = 38/70 (54%), Positives = 50/70 (71%) Frame = +2 Query: 341 VTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVA 520 V ++DIG LE VK L+E V +P+ E F + +T P KG+L FGPPGTGKT+LAKA+A Sbjct: 494 VRWEDIGGLEEVKRELRETVQMPVMYAEKFLRFGVT-PSKGVLFFGPPGTGKTLLAKAIA 552 Query: 521 TEAGANFINI 550 E ANFI++ Sbjct: 553 NECSANFISV 562 Score = 72.0 bits (175), Expect = 1e-12 Identities = 37/71 (52%), Positives = 49/71 (69%) Frame = +2 Query: 341 VTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVA 520 V +DDIG ++ELV LPL+ P+LF K KP +GIL++GPPGTGKT++A+AVA Sbjct: 221 VGYDDIGGCRRQMAQIRELVELPLRHPQLF-KSIGIKPPRGILMYGPPGTGKTLMARAVA 279 Query: 521 TEAGANFINIS 553 E GA F I+ Sbjct: 280 NETGAFFFLIN 290
>TERA1_CAEEL (P54811) Transitional endoplasmic reticulum ATPase homolog 1| (p97/CDC48 homolog 1) Length = 809 Score = 78.2 bits (191), Expect = 2e-14 Identities = 37/69 (53%), Positives = 51/69 (73%) Frame = +2 Query: 344 TFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVAT 523 T+ DIG L+NVK L+ELV P++ PE + K + +P +G+L +GPPG GKT+LAKA+A Sbjct: 481 TWSDIGGLQNVKRELQELVQYPVEHPEKYLKFGM-QPSRGVLFYGPPGCGKTLLAKAIAN 539 Query: 524 EAGANFINI 550 E ANFI+I Sbjct: 540 ECQANFISI 548 Score = 75.5 bits (184), Expect = 1e-13 Identities = 40/75 (53%), Positives = 53/75 (70%) Frame = +2 Query: 329 NDIGVTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLA 508 NDIG +DD+G + +KE+V LPL+ P+LF K KP +GILLFGPPGTGKT++A Sbjct: 205 NDIG--YDDLGGVRKQLAQIKEMVELPLRHPQLF-KAIGIKPPRGILLFGPPGTGKTLIA 261 Query: 509 KAVATEAGANFINIS 553 +AVA E G+ F I+ Sbjct: 262 RAVANETGSFFFLIN 276
>PSMR_METTH (O26824) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 410 Score = 76.6 bits (187), Expect = 4e-14 Identities = 41/73 (56%), Positives = 51/73 (69%) Frame = +2 Query: 341 VTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVA 520 V+++ IG LE +KE V LPL++PELF K + P KG+LL+GPPGTGKT+LAKAVA Sbjct: 148 VSYEQIGGLEEQVREVKETVELPLKKPELFEKIGIEPP-KGVLLYGPPGTGKTLLAKAVA 206 Query: 521 TEAGANFINISMS 559 E A FI I S Sbjct: 207 HETNATFIKIVAS 219
>PSMR_METKA (Q8TX03) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 436 Score = 75.9 bits (185), Expect = 8e-14 Identities = 42/89 (47%), Positives = 60/89 (67%) Frame = +2 Query: 287 NEFEKRLLADVIPPNDIGVTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGI 466 +E + R+LA + + V++DDIG L+ ++E+V PL+ PELF K + P KG+ Sbjct: 159 SEKDSRVLAMEVDESP-DVSYDDIGGLDEQIREIREVVEKPLKEPELFEKVGVEPP-KGV 216 Query: 467 LLFGPPGTGKTMLAKAVATEAGANFINIS 553 LL+GPPGTGKT+LAKAVA A A FI ++ Sbjct: 217 LLYGPPGTGKTLLAKAVANHADATFIRLA 245
>KTNA1_RAT (Q6E0V2) Katanin p60 ATPase-containing subunit A1 (EC 3.6.4.3)| (Katanin p60 subunit A1) (p60 katanin) Length = 491 Score = 75.9 bits (185), Expect = 8e-14 Identities = 43/94 (45%), Positives = 60/94 (63%) Frame = +2 Query: 284 ENEFEKRLLADVIPPNDIGVTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKG 463 + + + L D+I N V + DI L K+ L+E V+LP+ PE F KG + +P KG Sbjct: 188 DKDLVEALERDIISQNP-NVRWYDIADLVEAKKLLQEAVVLPMWMPEFF-KG-IRRPWKG 244 Query: 464 ILLFGPPGTGKTMLAKAVATEAGANFINISMSSI 565 +L+ GPPGTGKT+LAKAVATE F N+S S++ Sbjct: 245 VLMVGPPGTGKTLLAKAVATECKTTFFNVSSSTL 278
>KTNA1_MOUSE (Q9WV86) Katanin p60 ATPase-containing subunit A1 (EC 3.6.4.3)| (Katanin p60 subunit A1) (p60 katanin) (Lipotransin) Length = 491 Score = 75.9 bits (185), Expect = 8e-14 Identities = 43/94 (45%), Positives = 60/94 (63%) Frame = +2 Query: 284 ENEFEKRLLADVIPPNDIGVTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKG 463 + + + L D+I N V + DI L K+ L+E V+LP+ PE F KG + +P KG Sbjct: 188 DKDLVEALERDIISQNP-NVRWYDIADLVEAKKLLQEAVVLPMWMPEFF-KG-IRRPWKG 244 Query: 464 ILLFGPPGTGKTMLAKAVATEAGANFINISMSSI 565 +L+ GPPGTGKT+LAKAVATE F N+S S++ Sbjct: 245 VLMVGPPGTGKTLLAKAVATECKTTFFNVSSSTL 278
>VPS4A_MOUSE (Q8VEJ9) Vacuolar sorting protein 4a| Length = 437 Score = 75.9 bits (185), Expect = 8e-14 Identities = 45/97 (46%), Positives = 66/97 (68%), Gaps = 3/97 (3%) Frame = +2 Query: 284 ENEFEKRLLADVI--PPNDIGVTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPC 457 + + +++L+ V+ PN + ++D+ LE KE LKE V+LP++ P LF G+ T P Sbjct: 106 KKKLQEQLMGAVVMEKPN---IRWNDVAGLEGAKEALKEAVILPIKFPHLFT-GKRT-PW 160 Query: 458 KGILLFGPPGTGKTMLAKAVATEA-GANFINISMSSI 565 +GILLFGPPGTGK+ LAKAVATEA + F ++S S + Sbjct: 161 RGILLFGPPGTGKSYLAKAVATEANNSTFFSVSSSDL 197
>VPS4A_HUMAN (Q9UN37) Vacuolar sorting protein 4a (SKD2 protein) (hVPS4)| (VPS4-1) Length = 437 Score = 75.9 bits (185), Expect = 8e-14 Identities = 45/97 (46%), Positives = 66/97 (68%), Gaps = 3/97 (3%) Frame = +2 Query: 284 ENEFEKRLLADVI--PPNDIGVTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPC 457 + + +++L+ V+ PN + ++D+ LE KE LKE V+LP++ P LF G+ T P Sbjct: 106 KKKLQEQLMGAVVMEKPN---IRWNDVAGLEGAKEALKEAVILPIKFPHLFT-GKRT-PW 160 Query: 458 KGILLFGPPGTGKTMLAKAVATEA-GANFINISMSSI 565 +GILLFGPPGTGK+ LAKAVATEA + F ++S S + Sbjct: 161 RGILLFGPPGTGKSYLAKAVATEANNSTFFSVSSSDL 197
>MSP1_CAEEL (P54815) Protein MSP1 homolog| Length = 342 Score = 75.9 bits (185), Expect = 8e-14 Identities = 39/93 (41%), Positives = 57/93 (61%) Frame = +2 Query: 287 NEFEKRLLADVIPPNDIGVTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGI 466 +E E R+ + D+G +D+IG E + LK+ ++LPL+ L P +GI Sbjct: 62 SEHEIRIATQFVGGEDVGADWDEIGGCEELVAELKDRIILPLRFASQ-SGSHLLSPPRGI 120 Query: 467 LLFGPPGTGKTMLAKAVATEAGANFINISMSSI 565 LL+GPPG GKT+LAKAVA AG FIN+ +S++ Sbjct: 121 LLYGPPGCGKTLLAKAVARAAGCRFINLQVSNL 153
>PRS10_SCHPO (O74445) Probable 26S protease subunit rpt4| Length = 388 Score = 75.9 bits (185), Expect = 8e-14 Identities = 39/80 (48%), Positives = 54/80 (67%) Frame = +2 Query: 326 PNDIGVTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTML 505 P DI +F +G L L+E++ LPL+ PELF + + KP KG+LL+GPPGTGKT+L Sbjct: 126 PGDI--SFAGVGGLNEQIRELREVIELPLKNPELFLRVGI-KPPKGVLLYGPPGTGKTLL 182 Query: 506 AKAVATEAGANFINISMSSI 565 A+AVA G NF+ + S+I Sbjct: 183 ARAVAASLGVNFLKVVSSAI 202
>PEX6_YEAST (P33760) Peroxisomal biogenesis factor 6 (Peroxin-6) (Peroxisome| biosynthesis protein PAS8) Length = 1030 Score = 75.5 bits (184), Expect = 1e-13 Identities = 40/88 (45%), Positives = 55/88 (62%) Frame = +2 Query: 287 NEFEKRLLADVIPPNDIGVTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGI 466 NEF + A IP VT+DDIG ++ VK + + + +PL+ PELF G K GI Sbjct: 715 NEFSVSIGAPQIP----NVTWDDIGGIDFVKGEILDTIDMPLKHPELFTSGM--KKRSGI 768 Query: 467 LLFGPPGTGKTMLAKAVATEAGANFINI 550 L +GPPGTGKT++AKA+AT NF ++ Sbjct: 769 LFYGPPGTGKTLMAKAIATNFSLNFFSV 796
>VPS4B_MOUSE (P46467) Vacuolar sorting protein 4b (SKD1 protein)| Length = 444 Score = 75.5 bits (184), Expect = 1e-13 Identities = 43/76 (56%), Positives = 54/76 (71%), Gaps = 1/76 (1%) Frame = +2 Query: 341 VTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVA 520 V + D+ LE KE LKE V+LP++ P LF G+ T P +GILLFGPPGTGK+ LAKAVA Sbjct: 131 VKWSDVAGLEGAKEALKEAVILPIKFPHLFT-GKRT-PWRGILLFGPPGTGKSYLAKAVA 188 Query: 521 TEA-GANFINISMSSI 565 TEA + F +IS S + Sbjct: 189 TEANNSTFFSISSSDL 204
>VPS4B_HUMAN (O75351) Vacuolar sorting protein 4b (SKD1 protein)| Length = 444 Score = 75.5 bits (184), Expect = 1e-13 Identities = 43/76 (56%), Positives = 54/76 (71%), Gaps = 1/76 (1%) Frame = +2 Query: 341 VTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVA 520 V + D+ LE KE LKE V+LP++ P LF G+ T P +GILLFGPPGTGK+ LAKAVA Sbjct: 131 VKWSDVAGLEGAKEALKEAVILPIKFPHLFT-GKRT-PWRGILLFGPPGTGKSYLAKAVA 188 Query: 521 TEA-GANFINISMSSI 565 TEA + F +IS S + Sbjct: 189 TEANNSTFFSISSSDL 204
>PSMR_SULTO (Q975U2) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 392 Score = 75.1 bits (183), Expect = 1e-13 Identities = 38/73 (52%), Positives = 51/73 (69%) Frame = +2 Query: 341 VTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVA 520 V + DIG L ++E++ LPL+ PELF + + P KG+LL+GPPGTGKT+LAKAVA Sbjct: 131 VHYSDIGGLNEQINEIREVIELPLKNPELFKEIGIDPP-KGVLLYGPPGTGKTLLAKAVA 189 Query: 521 TEAGANFINISMS 559 TE+ A FI + S Sbjct: 190 TESNATFIQVVAS 202
>PEX6_PICAN (Q9UVU5) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 1135 Score = 74.7 bits (182), Expect = 2e-13 Identities = 39/88 (44%), Positives = 56/88 (63%) Frame = +2 Query: 287 NEFEKRLLADVIPPNDIGVTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGI 466 N+F + A IP V ++D+G L+ VK+ + + + +PL+ PELF KG K GI Sbjct: 796 NKFSDMIGAPRIPD----VKWEDVGGLDVVKDEILDTIEMPLKHPELFSKGM--KKRSGI 849 Query: 467 LLFGPPGTGKTMLAKAVATEAGANFINI 550 L +GPPGTGKT+LAKA+AT NF ++ Sbjct: 850 LFYGPPGTGKTLLAKAIATNFALNFFSV 877
>PSMR_ARCFU (O28303) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 398 Score = 74.7 bits (182), Expect = 2e-13 Identities = 37/70 (52%), Positives = 51/70 (72%) Frame = +2 Query: 341 VTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVA 520 V+++DIG L+ E ++E V LPL +PELF + + P KG+LL+GPPGTGKT+LAKAVA Sbjct: 138 VSYEDIGGLDVQIEEIREAVELPLLKPELFAEVGIEPP-KGVLLYGPPGTGKTLLAKAVA 196 Query: 521 TEAGANFINI 550 + A FI + Sbjct: 197 NQTRATFIRV 206
>PRS10_CAEEL (O17071) Probable 26S protease regulatory subunit S10B (Proteasome| regulatory particle ATPase-like protein 4) Length = 406 Score = 74.3 bits (181), Expect = 2e-13 Identities = 37/75 (49%), Positives = 52/75 (69%) Frame = +2 Query: 341 VTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVA 520 +++ D+G L L+E+V LPL PELF + +T P KG LLFGPPGTGKT+LA+AVA Sbjct: 147 ISYSDVGGLAEQIRELREVVELPLINPELFKRVGITPP-KGCLLFGPPGTGKTLLARAVA 205 Query: 521 TEAGANFINISMSSI 565 ++ NF+ + S+I Sbjct: 206 SQLDCNFLKVVSSAI 220
>PSMR_PYRKO (Q5JHS5) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 397 Score = 73.9 bits (180), Expect = 3e-13 Identities = 37/75 (49%), Positives = 51/75 (68%) Frame = +2 Query: 341 VTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVA 520 VT++DIG LE + L+E + LPL+ PELF + + P KG+LL+GPPG GKT++AKAVA Sbjct: 135 VTYNDIGGLEKQLQELREAIELPLKHPELFEQVGIEPP-KGVLLYGPPGCGKTLMAKAVA 193 Query: 521 TEAGANFINISMSSI 565 A FI + S + Sbjct: 194 NHVNATFIRVVGSEL 208
>CDAT_PLAF7 (P46468) Putative cell division cycle ATPase| Length = 1229 Score = 73.2 bits (178), Expect = 5e-13 Identities = 37/70 (52%), Positives = 50/70 (71%) Frame = +2 Query: 341 VTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVA 520 VT++DIG + VKE LKE ++ PL+ L+ K + KGILL+GPPG GKT+LAKA+A Sbjct: 931 VTWNDIGGMNEVKEQLKETILYPLEYKHLYNKFN-SNYNKGILLYGPPGCGKTLLAKAIA 989 Query: 521 TEAGANFINI 550 E ANFI++ Sbjct: 990 NECKANFISV 999 Score = 63.9 bits (154), Expect = 3e-10 Identities = 31/80 (38%), Positives = 52/80 (65%) Frame = +2 Query: 296 EKRLLADVIPPNDIGVTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLF 475 E+ L + N+ +T++D+G ++ ++EL+ LPL+ PE+F ++ P KG+L+ Sbjct: 509 EEYLKREDYEENNDDITYEDLGGMKKQLNKIRELIELPLKYPEIFMSIGISAP-KGVLMH 567 Query: 476 GPPGTGKTMLAKAVATEAGA 535 G PGTGKT +AKA+A E+ A Sbjct: 568 GIPGTGKTSIAKAIANESNA 587
>PSMR_PYRFU (Q8U4H3) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 396 Score = 73.2 bits (178), Expect = 5e-13 Identities = 36/75 (48%), Positives = 52/75 (69%) Frame = +2 Query: 341 VTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVA 520 VT++DIG L+ + L+E + LPL+ PELF + + P KG+LL+GPPG GKT++AKA+A Sbjct: 134 VTYNDIGGLKKQLQELREAIELPLKHPELFEEVGIDPP-KGVLLYGPPGCGKTLMAKAIA 192 Query: 521 TEAGANFINISMSSI 565 E A FI + S + Sbjct: 193 HEVNATFIRVVGSEL 207
>PEX6_DEBHA (Q6BS73) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 1198 Score = 73.2 bits (178), Expect = 5e-13 Identities = 39/88 (44%), Positives = 55/88 (62%) Frame = +2 Query: 287 NEFEKRLLADVIPPNDIGVTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGI 466 N+F + A IP V ++DIG L+ VK+ + + + +PL+ PELF G K GI Sbjct: 822 NQFSDSIGAPRIPD----VKWEDIGGLDLVKDEIMDTIDMPLKHPELFSNG--LKKRSGI 875 Query: 467 LLFGPPGTGKTMLAKAVATEAGANFINI 550 L +GPPGTGKT+LAKA+AT NF ++ Sbjct: 876 LFYGPPGTGKTLLAKAIATNFSLNFFSV 903
>TBP7_YEAST (P40340) TAT-binding homolog 7| Length = 1379 Score = 72.8 bits (177), Expect = 6e-13 Identities = 38/82 (46%), Positives = 55/82 (67%), Gaps = 1/82 (1%) Frame = +2 Query: 296 EKRLLADVIPPN-DIGVTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILL 472 +K +AD+ P D+ V FDDIG L+N + LKE+V LPL PEL+ +T P +G+L Sbjct: 394 KKPEIADLDPLGVDMNVNFDDIGGLDNYIDQLKEMVALPLLYPELYQNFNITPP-RGVLF 452 Query: 473 FGPPGTGKTMLAKAVATEAGAN 538 GPPGTGKT++A+A+A ++ Sbjct: 453 HGPPGTGKTLMARALAASCSSD 474
>PSMR_PYRHO (O57940) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 399 Score = 72.4 bits (176), Expect = 8e-13 Identities = 36/75 (48%), Positives = 52/75 (69%) Frame = +2 Query: 341 VTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVA 520 VT++DIG L+ + L+E + LPL+ PELF + + P KG+LL+GPPG GKT++AKA+A Sbjct: 137 VTYNDIGGLKKQLQELREAIELPLKHPELFEEVGIDPP-KGVLLYGPPGCGKTLMAKALA 195 Query: 521 TEAGANFINISMSSI 565 E A FI + S + Sbjct: 196 HEVNATFIRVVGSEL 210
>PSMR_PYRAB (Q9V287) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 399 Score = 72.4 bits (176), Expect = 8e-13 Identities = 36/75 (48%), Positives = 52/75 (69%) Frame = +2 Query: 341 VTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVA 520 VT++DIG L+ + L+E + LPL+ PELF + + P KG+LL+GPPG GKT++AKA+A Sbjct: 137 VTYNDIGGLKKQLQELREAIELPLKHPELFEEVGIDPP-KGVLLYGPPGCGKTLMAKALA 195 Query: 521 TEAGANFINISMSSI 565 E A FI + S + Sbjct: 196 HEVNATFIRVVGSEL 210
>PRS4_RAT (P62193) 26S protease regulatory subunit 4 (P26s4) (Proteasome 26S| subunit ATPase 1) Length = 440 Score = 72.4 bits (176), Expect = 8e-13 Identities = 36/74 (48%), Positives = 51/74 (68%) Frame = +2 Query: 344 TFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVAT 523 T+ DIG L+N + +KE V LPL PE + + + KP KG++L+GPPGTGKT+LAKAVA Sbjct: 183 TYADIGGLDNQIQEIKESVELPLTHPEYYEEMGI-KPPKGVILYGPPGTGKTLLAKAVAN 241 Query: 524 EAGANFINISMSSI 565 + A F+ + S + Sbjct: 242 QTSATFLRVVGSEL 255
>PRS4_MOUSE (P62192) 26S protease regulatory subunit 4 (P26s4) (Proteasome 26S| subunit ATPase 1) Length = 440 Score = 72.4 bits (176), Expect = 8e-13 Identities = 36/74 (48%), Positives = 51/74 (68%) Frame = +2 Query: 344 TFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVAT 523 T+ DIG L+N + +KE V LPL PE + + + KP KG++L+GPPGTGKT+LAKAVA Sbjct: 183 TYADIGGLDNQIQEIKESVELPLTHPEYYEEMGI-KPPKGVILYGPPGTGKTLLAKAVAN 241 Query: 524 EAGANFINISMSSI 565 + A F+ + S + Sbjct: 242 QTSATFLRVVGSEL 255
>PRS4_HUMAN (P62191) 26S protease regulatory subunit 4 (P26s4) (Proteasome 26S| subunit ATPase 1) Length = 440 Score = 72.4 bits (176), Expect = 8e-13 Identities = 36/74 (48%), Positives = 51/74 (68%) Frame = +2 Query: 344 TFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVAT 523 T+ DIG L+N + +KE V LPL PE + + + KP KG++L+GPPGTGKT+LAKAVA Sbjct: 183 TYADIGGLDNQIQEIKESVELPLTHPEYYEEMGI-KPPKGVILYGPPGTGKTLLAKAVAN 241 Query: 524 EAGANFINISMSSI 565 + A F+ + S + Sbjct: 242 QTSATFLRVVGSEL 255
>PRS4_CHICK (Q90732) 26S protease regulatory subunit 4 (P26s4) (Proteasome 26S| subunit ATPase 1) Length = 440 Score = 72.4 bits (176), Expect = 8e-13 Identities = 36/74 (48%), Positives = 51/74 (68%) Frame = +2 Query: 344 TFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVAT 523 T+ DIG L+N + +KE V LPL PE + + + KP KG++L+GPPGTGKT+LAKAVA Sbjct: 183 TYADIGGLDNQIQEIKESVELPLTHPEYYEEMGI-KPPKGVILYGPPGTGKTLLAKAVAN 241 Query: 524 EAGANFINISMSSI 565 + A F+ + S + Sbjct: 242 QTSATFLRVVGSEL 255
>PEX6_ASHGO (Q74Z13) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 1021 Score = 72.4 bits (176), Expect = 8e-13 Identities = 41/88 (46%), Positives = 54/88 (61%) Frame = +2 Query: 287 NEFEKRLLADVIPPNDIGVTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGI 466 +EF + A IP V ++DIG LE VK + + + +PL+ PELF G K GI Sbjct: 706 DEFSDSIGAPKIP----NVFWEDIGGLEMVKGEILDTIDMPLKFPELFASGM--KKRSGI 759 Query: 467 LLFGPPGTGKTMLAKAVATEAGANFINI 550 L +GPPGTGKT+LAKAVAT NF ++ Sbjct: 760 LFYGPPGTGKTLLAKAVATNFSLNFFSV 787
>NVL_HUMAN (O15381) Nuclear valosin-containing protein-like (Nuclear VCP-like| protein) (NVLp) Length = 856 Score = 72.0 bits (175), Expect = 1e-12 Identities = 36/70 (51%), Positives = 50/70 (71%) Frame = +2 Query: 341 VTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVA 520 VT+ DIGALE+++E L ++ P++ P+ F L P G+LL GPPG GKT+LAKAVA Sbjct: 578 VTWADIGALEDIREELTMAILAPVRNPDQFKALGLVTPA-GVLLAGPPGCGKTLLAKAVA 636 Query: 521 TEAGANFINI 550 E+G NFI++ Sbjct: 637 NESGLNFISV 646 Score = 46.2 bits (108), Expect = 6e-05 Identities = 27/77 (35%), Positives = 46/77 (59%), Gaps = 2/77 (2%) Frame = +2 Query: 341 VTFDDIGALENVKETLKEL--VMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKA 514 V F+D+G + TLKE+ +++ ++ PE++ + P +G+LL GPPG GKT+LA A Sbjct: 262 VKFEDVGGNDM---TLKEVCKMLIHMRHPEVYHHLGVVPP-RGVLLHGPPGCGKTLLAHA 317 Query: 515 VATEAGANFINISMSSI 565 +A E + ++ I Sbjct: 318 IAGELDLPILKVAAPEI 334
>PRS10_SPETR (P62335) 26S protease regulatory subunit S10B (Proteasome subunit| p42) (Proteasome 26S subunit ATPase 6) (Conserved ATPase domain protein 44) (CADp44) Length = 389 Score = 72.0 bits (175), Expect = 1e-12 Identities = 36/75 (48%), Positives = 51/75 (68%) Frame = +2 Query: 341 VTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVA 520 V++ +IG L L+E++ LPL PELF + + P KG LL+GPPGTGKT+LA+AVA Sbjct: 130 VSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPP-KGCLLYGPPGTGKTLLARAVA 188 Query: 521 TEAGANFINISMSSI 565 ++ NF+ + SSI Sbjct: 189 SQLDCNFLKVVSSSI 203
>PRS10_MOUSE (P62334) 26S protease regulatory subunit S10B (Proteasome subunit| p42) (Proteasome 26S subunit ATPase 6) Length = 389 Score = 72.0 bits (175), Expect = 1e-12 Identities = 36/75 (48%), Positives = 51/75 (68%) Frame = +2 Query: 341 VTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVA 520 V++ +IG L L+E++ LPL PELF + + P KG LL+GPPGTGKT+LA+AVA Sbjct: 130 VSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPP-KGCLLYGPPGTGKTLLARAVA 188 Query: 521 TEAGANFINISMSSI 565 ++ NF+ + SSI Sbjct: 189 SQLDCNFLKVVSSSI 203
>PRS10_HUMAN (P62333) 26S protease regulatory subunit S10B (Proteasome subunit| p42) (Proteasome 26S subunit ATPase 6) Length = 389 Score = 72.0 bits (175), Expect = 1e-12 Identities = 36/75 (48%), Positives = 51/75 (68%) Frame = +2 Query: 341 VTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVA 520 V++ +IG L L+E++ LPL PELF + + P KG LL+GPPGTGKT+LA+AVA Sbjct: 130 VSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPP-KGCLLYGPPGTGKTLLARAVA 188 Query: 521 TEAGANFINISMSSI 565 ++ NF+ + SSI Sbjct: 189 SQLDCNFLKVVSSSI 203
>PEX6_KLULA (Q6CPV1) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 1000 Score = 72.0 bits (175), Expect = 1e-12 Identities = 35/75 (46%), Positives = 49/75 (65%) Frame = +2 Query: 326 PNDIGVTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTML 505 P VT+DDIG ++ VK + + + +PL+ PELF G K GIL +GPPGTGKT+L Sbjct: 694 PKIPNVTWDDIGGMDVVKGEIMDTIDMPLKHPELFSSGM--KKRSGILFYGPPGTGKTLL 751 Query: 506 AKAVATEAGANFINI 550 AKA+A+ NF ++ Sbjct: 752 AKAIASNFSLNFFSV 766
>PEX6_PICPA (P33289) Peroxisomal biogenesis factor 6 (Peroxin-6) (Peroxisome| biosynthesis protein PAS5) Length = 1165 Score = 71.6 bits (174), Expect = 1e-12 Identities = 37/88 (42%), Positives = 55/88 (62%) Frame = +2 Query: 287 NEFEKRLLADVIPPNDIGVTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGI 466 N+F + A IP V ++D+G L+ VK+ + + + +P++ PELF G K GI Sbjct: 802 NKFSDSIGAPRIP----NVKWEDVGGLDVVKDEILDTIDMPMKHPELFSNG--IKKRSGI 855 Query: 467 LLFGPPGTGKTMLAKAVATEAGANFINI 550 L +GPPGTGKT+LAKA+AT NF ++ Sbjct: 856 LFYGPPGTGKTLLAKAIATNFALNFFSV 883
>RIX7_YEAST (Q07844) Ribosome biogenesis ATPase RIX7| Length = 837 Score = 71.2 bits (173), Expect = 2e-12 Identities = 36/70 (51%), Positives = 53/70 (75%) Frame = +2 Query: 341 VTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVA 520 VT+ ++GAL+ V+ L ++ P++RPEL+ K ++ P G+LL+GPPG GKT+LAKAVA Sbjct: 530 VTWANVGALQRVRLELNMAIVQPIKRPELYEKVGISAP-GGVLLWGPPGCGKTLLAKAVA 588 Query: 521 TEAGANFINI 550 E+ ANFI+I Sbjct: 589 NESRANFISI 598 Score = 62.0 bits (149), Expect = 1e-09 Identities = 34/89 (38%), Positives = 52/89 (58%) Frame = +2 Query: 299 KRLLADVIPPNDIGVTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFG 478 +++ D PPN + +G +++V L EL+ LP+ PE+F + P +G+LL G Sbjct: 191 QKIKEDRSPPNS---SLKSLGGMDDVVAQLMELIGLPILHPEIFLSTGVEPP-RGVLLHG 246 Query: 479 PPGTGKTMLAKAVATEAGANFINISMSSI 565 PPG GKT +A A+A E FI+IS S+ Sbjct: 247 PPGCGKTSIANALAGELQVPFISISAPSV 275
>PRS8_DICDI (P34124) 26S protease regulatory subunit 8 (TAT-binding protein| homolog 10) (Fragment) Length = 389 Score = 70.9 bits (172), Expect = 2e-12 Identities = 34/74 (45%), Positives = 51/74 (68%) Frame = +2 Query: 344 TFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVAT 523 T+D +G L+ + +KE++ LP++ PELF + +P KG+LL+GPPGTGKT+LA+AVA Sbjct: 129 TYDMVGGLDKQIKEIKEVIELPIKHPELFESLGIAQP-KGVLLYGPPGTGKTLLARAVAH 187 Query: 524 EAGANFINISMSSI 565 FI +S S + Sbjct: 188 HTDCTFIRVSGSEL 201
>AFG2_YEAST (P32794) Protein AFG2| Length = 780 Score = 70.5 bits (171), Expect = 3e-12 Identities = 33/70 (47%), Positives = 49/70 (70%) Frame = +2 Query: 341 VTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVA 520 V + DIG E +K +KE++ LPL+ E F + ++ P KG+LL+GPPG KT+ AKA+A Sbjct: 513 VYWSDIGGQEELKTKMKEMIQLPLEASETFARLGISAP-KGVLLYGPPGCSKTLTAKALA 571 Query: 521 TEAGANFINI 550 TE+G NF+ + Sbjct: 572 TESGINFLAV 581 Score = 60.5 bits (145), Expect = 3e-09 Identities = 31/75 (41%), Positives = 48/75 (64%) Frame = +2 Query: 341 VTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVA 520 +++ +G L+ E+LK + +PL +P LF ++ P +GILL GPPGTGKTML + VA Sbjct: 242 LSYAAVGGLDKEIESLKSAIEIPLHQPTLFSSFGVSPP-RGILLHGPPGTGKTMLLRVVA 300 Query: 521 TEAGANFINISMSSI 565 + A+ + I+ SI Sbjct: 301 NTSNAHVLTINGPSI 315
>FTSH1_SYNY3 (Q55700) Cell division protein ftsH homolog 1 (EC 3.4.24.-)| Length = 627 Score = 70.5 bits (171), Expect = 3e-12 Identities = 39/74 (52%), Positives = 50/74 (67%) Frame = +2 Query: 338 GVTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAV 517 GV FDD+ ++ KE L+E+V L++PE F P KG+LL GPPGTGKT+LAKA+ Sbjct: 168 GVMFDDVAGIDEAKEELQEVVTF-LKQPERFTAVGAKIP-KGVLLVGPPGTGKTLLAKAI 225 Query: 518 ATEAGANFINISMS 559 A EAG F +IS S Sbjct: 226 AGEAGVPFFSISGS 239
>PEX6_RAT (P54777) Peroxisome assembly factor 2 (PAF-2) (Peroxisomal-type| ATPase 1) (Peroxin-6) (Peroxisomal biogenesis factor 6) Length = 978 Score = 70.5 bits (171), Expect = 3e-12 Identities = 35/75 (46%), Positives = 49/75 (65%) Frame = +2 Query: 326 PNDIGVTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTML 505 P V++ D+G L++VK+ + E + LPL+ PEL G G+LL GPPGTGKT+L Sbjct: 695 PKIPSVSWHDVGGLQDVKKEILETIQLPLEHPELLSLGLRRS---GLLLHGPPGTGKTLL 751 Query: 506 AKAVATEAGANFINI 550 AKAVATE F+++ Sbjct: 752 AKAVATECSLTFLSV 766 Score = 34.3 bits (77), Expect = 0.25 Identities = 17/50 (34%), Positives = 25/50 (50%) Frame = +2 Query: 416 RPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSI 565 +P L G L +LL GPPG+GKT A + G + + + SS+ Sbjct: 450 KPHLQPGGTLLTGTSCVLLQGPPGSGKTTAVTAACSRLGLHLLKVPCSSL 499
>PEX6_MOUSE (Q99LC9) Peroxisome assembly factor 2 (PAF-2) (Peroxisomal-type| ATPase 1) (Peroxin-6) (Peroxisomal biogenesis factor 6) Length = 981 Score = 70.5 bits (171), Expect = 3e-12 Identities = 35/75 (46%), Positives = 49/75 (65%) Frame = +2 Query: 326 PNDIGVTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTML 505 P V++ D+G L++VK+ + E + LPL+ PEL G G+LL GPPGTGKT+L Sbjct: 698 PRIPSVSWHDVGGLQDVKKEILETIQLPLEHPELLSLGLRRS---GLLLHGPPGTGKTLL 754 Query: 506 AKAVATEAGANFINI 550 AKAVATE F+++ Sbjct: 755 AKAVATECSLTFLSV 769 Score = 34.3 bits (77), Expect = 0.25 Identities = 17/50 (34%), Positives = 25/50 (50%) Frame = +2 Query: 416 RPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSI 565 +P L G L +LL GPPG+GKT A + G + + + SS+ Sbjct: 451 KPHLQPGGTLLTGTSCVLLQGPPGSGKTTAVTAACSRLGLHLLKVPCSSL 500
>PEX6_HUMAN (Q13608) Peroxisome assembly factor 2 (PAF-2) (Peroxisomal-type| ATPase 1) (Peroxin-6) (Peroxisomal biogenesis factor 6) Length = 980 Score = 70.1 bits (170), Expect = 4e-12 Identities = 35/75 (46%), Positives = 48/75 (64%) Frame = +2 Query: 326 PNDIGVTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTML 505 P V++ D+G L+ VK+ + E + LPL+ PEL G G+LL GPPGTGKT+L Sbjct: 697 PKIPSVSWHDVGGLQEVKKEILETIQLPLEHPELLSLGLRRS---GLLLHGPPGTGKTLL 753 Query: 506 AKAVATEAGANFINI 550 AKAVATE F+++ Sbjct: 754 AKAVATECSLTFLSV 768 Score = 35.4 bits (80), Expect = 0.11 Identities = 17/50 (34%), Positives = 25/50 (50%) Frame = +2 Query: 416 RPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSI 565 +P L G L +LL GPPG GKT + A + G + + + SS+ Sbjct: 450 KPRLQPGGALLTGTSSVLLRGPPGCGKTTVVAAACSHLGLHLLKVPCSSL 499
>PRS4_YEAST (P40327) 26S protease regulatory subunit 4 homolog (TAT-binding| homolog 5) Length = 437 Score = 70.1 bits (170), Expect = 4e-12 Identities = 36/74 (48%), Positives = 51/74 (68%) Frame = +2 Query: 344 TFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVAT 523 ++ DIG LE+ + +KE V LPL PEL+ + + KP KG++L+G PGTGKT+LAKAVA Sbjct: 180 SYSDIGGLESQIQEIKESVELPLTHPELYEEMGI-KPPKGVILYGAPGTGKTLLAKAVAN 238 Query: 524 EAGANFINISMSSI 565 + A F+ I S + Sbjct: 239 QTSATFLRIVGSEL 252
>PRS8_SCHPO (P41836) 26S protease regulatory subunit 8 homolog (Protein let1)| Length = 403 Score = 70.1 bits (170), Expect = 4e-12 Identities = 35/74 (47%), Positives = 51/74 (68%) Frame = +2 Query: 344 TFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVAT 523 T++ +G LE + +KE++ LP++ PELF + +P KGILL+GPPGTGKT+LA+AVA Sbjct: 143 TYEMVGGLEKQIKEIKEVIELPVKHPELFESLGIPQP-KGILLYGPPGTGKTLLARAVAH 201 Query: 524 EAGANFINISMSSI 565 FI +S S + Sbjct: 202 HTDCKFIRVSGSEL 215
>PRS4_DROME (P48601) 26S protease regulatory subunit 4 (P26s4)| Length = 439 Score = 70.1 bits (170), Expect = 4e-12 Identities = 35/74 (47%), Positives = 50/74 (67%) Frame = +2 Query: 344 TFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVAT 523 T+ DIG L+ + +KE V LPL PE + + + KP KG++L+GPPGTGKT+LAKAVA Sbjct: 182 TYADIGGLDTQIQEIKESVELPLTHPEYYEEMGI-KPPKGVILYGPPGTGKTLLAKAVAN 240 Query: 524 EAGANFINISMSSI 565 + A F+ + S + Sbjct: 241 QTSATFLRVVGSEL 254
>NVL_MOUSE (Q9DBY8) Nuclear valosin-containing protein-like (Nuclear VCP-like| protein) (NVLp) Length = 855 Score = 69.7 bits (169), Expect = 5e-12 Identities = 36/70 (51%), Positives = 50/70 (71%) Frame = +2 Query: 341 VTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVA 520 VT+ DIGALE++++ L ++ P++ P+ F L P GILL GPPG GKT+LAKAVA Sbjct: 577 VTWADIGALEDIRDELIMAILAPVRNPDQFRTLGLGTPA-GILLAGPPGCGKTLLAKAVA 635 Query: 521 TEAGANFINI 550 E+G NFI++ Sbjct: 636 NESGLNFISV 645 Score = 46.6 bits (109), Expect = 5e-05 Identities = 27/77 (35%), Positives = 46/77 (59%), Gaps = 2/77 (2%) Frame = +2 Query: 341 VTFDDIGALENVKETLKEL--VMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKA 514 V F+D+G + TLKE+ +++ ++ PE++ + P +G+LL GPPG GKT+LA A Sbjct: 261 VKFEDVGGND---ATLKEVCKMLIHMRHPEVYQHLGVVPP-RGVLLHGPPGCGKTLLAHA 316 Query: 515 VATEAGANFINISMSSI 565 +A E + ++ I Sbjct: 317 IAGELDLPILKVAAPEI 333
>FTSH_GUITH (O78516) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 631 Score = 69.3 bits (168), Expect = 7e-12 Identities = 38/74 (51%), Positives = 50/74 (67%) Frame = +2 Query: 338 GVTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAV 517 GVTF+D+ ++ KE +E+V L++PE F P KG+LL GPPGTGKT+LAKA+ Sbjct: 169 GVTFNDVAGVDEAKEEFEEVVSF-LKKPERFTAVGAKIP-KGVLLVGPPGTGKTLLAKAI 226 Query: 518 ATEAGANFINISMS 559 A EAG F +IS S Sbjct: 227 AGEAGVPFFSISGS 240
>PRS4_SCHPO (P36612) 26S protease regulatory subunit 4 homolog (Protein mts2)| Length = 448 Score = 69.3 bits (168), Expect = 7e-12 Identities = 35/74 (47%), Positives = 51/74 (68%) Frame = +2 Query: 344 TFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVAT 523 ++ DIG LE+ + +KE V LPL PEL+ + + KP KG++L+G PGTGKT+LAKAVA Sbjct: 189 SYADIGGLESQIQEIKEAVELPLTHPELYEEMGI-KPPKGVILYGAPGTGKTLLAKAVAN 247 Query: 524 EAGANFINISMSSI 565 + A F+ + S + Sbjct: 248 QTSATFLRVVGSEL 261
>FTSH2_SYNY3 (P73179) Cell division protein ftsH homolog 2 (EC 3.4.24.-)| Length = 665 Score = 68.9 bits (167), Expect = 9e-12 Identities = 38/74 (51%), Positives = 50/74 (67%) Frame = +2 Query: 338 GVTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAV 517 GV FDD+ ++ KE L+E+V L++PE F P +G+LL GPPGTGKT+LAKA+ Sbjct: 207 GVGFDDVAGIDEAKEELQEVVTF-LKQPEKFTAIGAKIP-RGVLLIGPPGTGKTLLAKAI 264 Query: 518 ATEAGANFINISMS 559 A EAG F +IS S Sbjct: 265 AGEAGVPFFSISGS 278
>PRS8_RAT (P62198) 26S protease regulatory subunit 8 (Proteasome subunit p45)| (p45/SUG) (Proteasome 26S subunit ATPase 5) (Thyroid hormone receptor-interacting protein 1) (TRIP1) Length = 406 Score = 68.9 bits (167), Expect = 9e-12 Identities = 34/74 (45%), Positives = 51/74 (68%) Frame = +2 Query: 344 TFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVAT 523 T++ IG L+ + +KE++ LP++ PELF + +P KG+LL+GPPGTGKT+LA+AVA Sbjct: 147 TYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQP-KGVLLYGPPGTGKTLLARAVAH 205 Query: 524 EAGANFINISMSSI 565 FI +S S + Sbjct: 206 HTDCTFIRVSGSEL 219
>PRS8_PIG (P62197) 26S protease regulatory subunit 8 (Proteasome subunit p45)| (p45/SUG) (Proteasome 26S subunit ATPase 5) (TAT-binding protein homolog 10) (TBP10) Length = 406 Score = 68.9 bits (167), Expect = 9e-12 Identities = 34/74 (45%), Positives = 51/74 (68%) Frame = +2 Query: 344 TFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVAT 523 T++ IG L+ + +KE++ LP++ PELF + +P KG+LL+GPPGTGKT+LA+AVA Sbjct: 147 TYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQP-KGVLLYGPPGTGKTLLARAVAH 205 Query: 524 EAGANFINISMSSI 565 FI +S S + Sbjct: 206 HTDCTFIRVSGSEL 219
>PRS8_MOUSE (P62196) 26S protease regulatory subunit 8 (Proteasome subunit p45)| (p45/SUG) (Proteasome 26S subunit ATPase 5) (mSUG1) Length = 406 Score = 68.9 bits (167), Expect = 9e-12 Identities = 34/74 (45%), Positives = 51/74 (68%) Frame = +2 Query: 344 TFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVAT 523 T++ IG L+ + +KE++ LP++ PELF + +P KG+LL+GPPGTGKT+LA+AVA Sbjct: 147 TYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQP-KGVLLYGPPGTGKTLLARAVAH 205 Query: 524 EAGANFINISMSSI 565 FI +S S + Sbjct: 206 HTDCTFIRVSGSEL 219
>PRS8_HUMAN (P62195) 26S protease regulatory subunit 8 (Proteasome subunit p45)| (p45/SUG) (Proteasome 26S subunit ATPase 5) (Thyroid hormone receptor-interacting protein 1) (TRIP1) Length = 406 Score = 68.9 bits (167), Expect = 9e-12 Identities = 34/74 (45%), Positives = 51/74 (68%) Frame = +2 Query: 344 TFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVAT 523 T++ IG L+ + +KE++ LP++ PELF + +P KG+LL+GPPGTGKT+LA+AVA Sbjct: 147 TYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQP-KGVLLYGPPGTGKTLLARAVAH 205 Query: 524 EAGANFINISMSSI 565 FI +S S + Sbjct: 206 HTDCTFIRVSGSEL 219
>PRS8_BOVIN (P62194) 26S protease regulatory subunit 8 (Proteasome subunit p45)| (p45/SUG) (Proteasome 26S subunit ATPase 5) Length = 406 Score = 68.9 bits (167), Expect = 9e-12 Identities = 34/74 (45%), Positives = 51/74 (68%) Frame = +2 Query: 344 TFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVAT 523 T++ IG L+ + +KE++ LP++ PELF + +P KG+LL+GPPGTGKT+LA+AVA Sbjct: 147 TYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQP-KGVLLYGPPGTGKTLLARAVAH 205 Query: 524 EAGANFINISMSSI 565 FI +S S + Sbjct: 206 HTDCTFIRVSGSEL 219
>PRS7_SCHPO (O42931) 26S protease regulatory subunit 7 homolog| Length = 438 Score = 68.9 bits (167), Expect = 9e-12 Identities = 36/75 (48%), Positives = 48/75 (64%) Frame = +2 Query: 341 VTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVA 520 VT+ D+G + E L+E+V LPL PE F K + P KGI+L+GPPGTGKT+ A+AVA Sbjct: 176 VTYGDVGGCKEQIERLREVVELPLLSPERFVKLGIDPP-KGIMLYGPPGTGKTLCARAVA 234 Query: 521 TEAGANFINISMSSI 565 A FI + S + Sbjct: 235 NRTDATFIRVIGSEL 249
>PRS6B_ENCCU (Q8SQI9) 26S protease regulatory subunit 6B homolog| Length = 387 Score = 68.6 bits (166), Expect = 1e-11 Identities = 35/73 (47%), Positives = 50/73 (68%) Frame = +2 Query: 341 VTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVA 520 VT+ D+G L+ K+ +KE V LPL + +L+ + + P +G+LL+GPPGTGKTML KAVA Sbjct: 131 VTYGDVGGLDVQKQEIKETVELPLLQSDLYRQIGIDPP-QGVLLYGPPGTGKTMLVKAVA 189 Query: 521 TEAGANFINISMS 559 A FI ++ S Sbjct: 190 NHTKATFIRVNGS 202
>PRS8_DROME (O18413) 26S protease regulatory subunit 8| Length = 405 Score = 68.6 bits (166), Expect = 1e-11 Identities = 33/74 (44%), Positives = 51/74 (68%) Frame = +2 Query: 344 TFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVAT 523 T++ +G L+ + +KE++ LP++ PELF + +P KG+LL+GPPGTGKT+LA+AVA Sbjct: 146 TYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQP-KGVLLYGPPGTGKTLLARAVAH 204 Query: 524 EAGANFINISMSSI 565 FI +S S + Sbjct: 205 HTECTFIRVSGSEL 218
>PRS8_MANSE (P54814) 26S protease regulatory subunit 8 (18-56 protein)| Length = 402 Score = 68.6 bits (166), Expect = 1e-11 Identities = 33/74 (44%), Positives = 51/74 (68%) Frame = +2 Query: 344 TFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVAT 523 T++ +G L+ + +KE++ LP++ PELF + +P KG+LL+GPPGTGKT+LA+AVA Sbjct: 143 TYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQP-KGVLLYGPPGTGKTLLARAVAH 201 Query: 524 EAGANFINISMSSI 565 FI +S S + Sbjct: 202 HTECTFIRVSGSEL 215
>PRS7_YEAST (P33299) 26S protease regulatory subunit 7 homolog (CIM5 protein)| (TAT-binding homolog 3) Length = 467 Score = 68.6 bits (166), Expect = 1e-11 Identities = 36/75 (48%), Positives = 48/75 (64%) Frame = +2 Query: 341 VTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVA 520 VT+ D+G ++ E L+E+V LPL PE F + P KGILL+GPPGTGKT+ A+AVA Sbjct: 206 VTYSDVGGCKDQIEKLREVVELPLLSPERFATLGIDPP-KGILLYGPPGTGKTLCARAVA 264 Query: 521 TEAGANFINISMSSI 565 A FI + S + Sbjct: 265 NRTDATFIRVIGSEL 279
>PSMR_AERPE (Q9YAC7) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 409 Score = 68.6 bits (166), Expect = 1e-11 Identities = 37/75 (49%), Positives = 48/75 (64%) Frame = +2 Query: 341 VTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVA 520 V F D+G LE + E V+LP++ P LF + + P KG+LL GPPGTGKT+LAKAVA Sbjct: 136 VFFKDVGGLEEQIREIYEAVVLPIKNPHLFRELGIDPP-KGVLLHGPPGTGKTLLAKAVA 194 Query: 521 TEAGANFINISMSSI 565 E A FI + S + Sbjct: 195 GETEATFIRVVGSEL 209
>FTSH_PORPU (P51327) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 628 Score = 68.2 bits (165), Expect = 2e-11 Identities = 38/74 (51%), Positives = 49/74 (66%) Frame = +2 Query: 338 GVTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAV 517 GV F+D+ +E KE +E+V L++PE F P KG+LL GPPGTGKT+LAKA+ Sbjct: 169 GVVFNDVAGVEEAKEEFQEVVTF-LKQPESFTAVGAKIP-KGVLLVGPPGTGKTLLAKAI 226 Query: 518 ATEAGANFINISMS 559 A EAG F +IS S Sbjct: 227 AGEAGVPFFSISGS 240
>PRS6B_SCHPO (O74894) 26S protease regulatory subunit 6B homolog| Length = 389 Score = 68.2 bits (165), Expect = 2e-11 Identities = 37/93 (39%), Positives = 55/93 (59%), Gaps = 12/93 (12%) Frame = +2 Query: 308 LADVIPPNDIG------------VTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTK 451 L D++PP V++ D+G L+ K+ ++E V LPL + +L+ + + Sbjct: 108 LVDILPPEADSSISMLRPDERPDVSYADVGGLDVQKQEVREAVELPLTQGDLYRQIGIDP 167 Query: 452 PCKGILLFGPPGTGKTMLAKAVATEAGANFINI 550 P +G+LL+GPPGTGKTML KAVA ANFI + Sbjct: 168 P-RGVLLYGPPGTGKTMLVKAVANSTAANFIRV 199
>PRS6B_YEAST (P33298) 26S protease regulatory subunit 6B homolog (YNT1 protein)| (TAT-binding homolog 2) Length = 428 Score = 68.2 bits (165), Expect = 2e-11 Identities = 38/96 (39%), Positives = 57/96 (59%), Gaps = 12/96 (12%) Frame = +2 Query: 308 LADVIPPNDIG------------VTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTK 451 L D++PP+ VT+ D+G L+ K+ ++E V LPL + +L+ + + Sbjct: 146 LVDILPPDSDSSISVMGENEKPDVTYADVGGLDMQKQEIREAVELPLVQADLYEQIGIDP 205 Query: 452 PCKGILLFGPPGTGKTMLAKAVATEAGANFINISMS 559 P +G+LL+GPPGTGKTML KAVA A FI ++ S Sbjct: 206 P-RGVLLYGPPGTGKTMLVKAVANSTKAAFIRVNGS 240
>ATAD2_HUMAN (Q6PL18) ATPase family AAA domain-containing protein 2| Length = 1390 Score = 67.8 bits (164), Expect = 2e-11 Identities = 37/74 (50%), Positives = 49/74 (66%), Gaps = 1/74 (1%) Frame = +2 Query: 308 LADVIPPN-DIGVTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPP 484 LADV P D V FD +G L N LKE+V+ PL PE+F K ++ P +G L +GPP Sbjct: 411 LADVDPMQLDSSVRFDSVGGLSNHIAALKEMVVFPLLYPEVFEKFKIQPP-RGCLFYGPP 469 Query: 485 GTGKTMLAKAVATE 526 GTGKT++A+A+A E Sbjct: 470 GTGKTLVARALANE 483
>PRS7_SPIOL (Q41365) 26S protease regulatory subunit 7 (26S proteasome subunit| 7) (26S proteasome AAA-ATPase subunit RPT1) (Regulatory particle triple-A ATPase subunit 1) Length = 426 Score = 67.8 bits (164), Expect = 2e-11 Identities = 34/75 (45%), Positives = 49/75 (65%) Frame = +2 Query: 341 VTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVA 520 VT++D+G + E ++E+V LP+ PE F K + P KG+L +GPPGTGKT+LA+AVA Sbjct: 165 VTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPP-KGVLCYGPPGTGKTLLARAVA 223 Query: 521 TEAGANFINISMSSI 565 A FI + S + Sbjct: 224 NRTDACFIRVIGSEL 238
>PRS7_ORYSA (Q9FXT9) 26S protease regulatory subunit 7 (26S proteasome subunit| 7) (26S proteasome AAA-ATPase subunit RPT1) (Regulatory particle triple-A ATPase subunit 1) Length = 426 Score = 67.8 bits (164), Expect = 2e-11 Identities = 34/75 (45%), Positives = 49/75 (65%) Frame = +2 Query: 341 VTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVA 520 VT++D+G + E ++E+V LP+ PE F K + P KG+L +GPPGTGKT+LA+AVA Sbjct: 165 VTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPP-KGVLCYGPPGTGKTLLARAVA 223 Query: 521 TEAGANFINISMSSI 565 A FI + S + Sbjct: 224 NRTDACFIRVIGSEL 238
>PRS7_ARATH (Q9SSB5) 26S protease regulatory subunit 7 (26S proteasome subunit| 7) (26S proteasome AAA-ATPase subunit RPT1a) (Regulatory particle triple-A ATPase subunit 1a) Length = 426 Score = 67.8 bits (164), Expect = 2e-11 Identities = 34/75 (45%), Positives = 49/75 (65%) Frame = +2 Query: 341 VTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVA 520 VT++D+G + E ++E+V LP+ PE F K + P KG+L +GPPGTGKT+LA+AVA Sbjct: 165 VTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPP-KGVLCYGPPGTGKTLLARAVA 223 Query: 521 TEAGANFINISMSSI 565 A FI + S + Sbjct: 224 NRTDACFIRVIGSEL 238
>PRS8_NAEFO (Q25544) 26S protease regulatory subunit 8 homolog (TAT-binding| protein homolog) Length = 414 Score = 67.8 bits (164), Expect = 2e-11 Identities = 31/74 (41%), Positives = 51/74 (68%) Frame = +2 Query: 344 TFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVAT 523 T++ +G L+ + +KE++ LP++ PELF + +P KG++++GPPGTGKT+LA+AVA Sbjct: 154 TYEMVGGLDEQIKEIKEVIELPIKHPELFESLGIAQP-KGVIMYGPPGTGKTLLARAVAH 212 Query: 524 EAGANFINISMSSI 565 FI +S S + Sbjct: 213 HTDCTFIRVSGSEL 226
>ATAD2_PONPY (Q5RDX4) ATPase family AAA domain-containing protein 2| Length = 1091 Score = 67.8 bits (164), Expect = 2e-11 Identities = 37/74 (50%), Positives = 49/74 (66%), Gaps = 1/74 (1%) Frame = +2 Query: 308 LADVIPPN-DIGVTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPP 484 LADV P D V FD +G L N LKE+V+ PL PE+F K ++ P +G L +GPP Sbjct: 242 LADVDPMQLDSSVRFDSVGGLSNHIAALKEMVVFPLLYPEVFEKFKIQPP-RGCLFYGPP 300 Query: 485 GTGKTMLAKAVATE 526 GTGKT++A+A+A E Sbjct: 301 GTGKTLVARALANE 314
>PRS7_PRUPE (O64982) 26S protease regulatory subunit 7 (26S proteasome subunit| 7) (26S proteasome AAA-ATPase subunit RPT1) (Regulatory particle triple-A ATPase subunit 1) Length = 425 Score = 67.8 bits (164), Expect = 2e-11 Identities = 34/75 (45%), Positives = 49/75 (65%) Frame = +2 Query: 341 VTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVA 520 VT++D+G + E ++E+V LP+ PE F K + P KG+L +GPPGTGKT+LA+AVA Sbjct: 164 VTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPP-KGVLCYGPPGTGKTLLARAVA 222 Query: 521 TEAGANFINISMSSI 565 A FI + S + Sbjct: 223 NRTDACFIRVIGSEL 237
>PRS6B_SOLTU (P54778) 26S protease regulatory subunit 6B homolog| Length = 413 Score = 67.8 bits (164), Expect = 2e-11 Identities = 40/93 (43%), Positives = 54/93 (58%), Gaps = 12/93 (12%) Frame = +2 Query: 308 LADVIPPNDIG------------VTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTK 451 L DV+PP VT++DIG + K+ ++E V LPL EL+ + + Sbjct: 134 LVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDP 193 Query: 452 PCKGILLFGPPGTGKTMLAKAVATEAGANFINI 550 P +G+LL+GPPGTGKTMLAKAVA A FI + Sbjct: 194 P-RGVLLYGPPGTGKTMLAKAVAHHTTAAFIRV 225
>PRS6B_ASPNG (P78578) 26S protease regulatory subunit 6B homolog| Length = 423 Score = 67.8 bits (164), Expect = 2e-11 Identities = 38/96 (39%), Positives = 57/96 (59%), Gaps = 12/96 (12%) Frame = +2 Query: 308 LADVIPPNDIG------------VTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTK 451 L D++PP VT+ D+G L+ K+ ++E V LPL + +L+ + + Sbjct: 140 LVDILPPEADSSIAMLGENEKPDVTYADVGGLDMQKQEIREAVELPLTQFDLYKQIGIDP 199 Query: 452 PCKGILLFGPPGTGKTMLAKAVATEAGANFINISMS 559 P +G+LL+GPPGTGKTML KAVA A+FI ++ S Sbjct: 200 P-RGVLLYGPPGTGKTMLVKAVANSTTASFIRVNGS 234
>PRS8_YEAST (Q01939) 26S protease regulatory subunit 8 homolog (SUG1 protein)| (CIM3 protein) (TAT-binding protein TBY1) Length = 405 Score = 67.4 bits (163), Expect = 3e-11 Identities = 32/70 (45%), Positives = 48/70 (68%) Frame = +2 Query: 344 TFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVAT 523 T+D +G L + +KE++ LP++ PELF + +P KG++L+GPPGTGKT+LA+AVA Sbjct: 146 TYDMVGGLTKQIKEIKEVIELPVKHPELFESLGIAQP-KGVILYGPPGTGKTLLARAVAH 204 Query: 524 EAGANFINIS 553 FI +S Sbjct: 205 HTDCKFIRVS 214
>PSMR_METMA (Q8PY58) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 420 Score = 67.0 bits (162), Expect = 4e-11 Identities = 40/98 (40%), Positives = 55/98 (56%), Gaps = 12/98 (12%) Frame = +2 Query: 308 LADVIPPND------------IGVTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTK 451 +A+VIP + + V +D IG L+ + L+E V LPL PE F + + Sbjct: 133 IAEVIPSTEEPFVAAMEVIESVEVDYDQIGGLDEQIQELQEAVELPLTSPERFARIGIEP 192 Query: 452 PCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSI 565 P KG+LL+G PGTGKT+LAKAVA A FI + S + Sbjct: 193 P-KGVLLYGLPGTGKTLLAKAVAHRTNATFIRVVGSEL 229
>PRS6B_ARATH (Q9SEI4) 26S protease regulatory subunit 6B homolog (26S proteasome| AAA-ATPase subunit RPT3) (Regulatory particle triple-A ATPase subunit 3) Length = 408 Score = 67.0 bits (162), Expect = 4e-11 Identities = 39/93 (41%), Positives = 54/93 (58%), Gaps = 12/93 (12%) Frame = +2 Query: 308 LADVIPPNDIG------------VTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTK 451 L DV+PP V+++DIG + K+ ++E V LPL EL+ + + Sbjct: 129 LVDVLPPEADSSISLLSQSEKPDVSYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDP 188 Query: 452 PCKGILLFGPPGTGKTMLAKAVATEAGANFINI 550 P +G+LL+GPPGTGKTMLAKAVA A FI + Sbjct: 189 P-RGVLLYGPPGTGKTMLAKAVANHTTAAFIRV 220
>PSMR_METAC (Q8TI88) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 421 Score = 67.0 bits (162), Expect = 4e-11 Identities = 41/98 (41%), Positives = 55/98 (56%), Gaps = 12/98 (12%) Frame = +2 Query: 308 LADVIPPND------------IGVTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTK 451 +A+VIP + I V +D IG L+ + L+E V LPL PE F + + Sbjct: 133 IAEVIPSTEEPFVAAMEVIESIEVDYDQIGGLDEQIQELQEAVELPLIEPERFARIGIEP 192 Query: 452 PCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSI 565 P KG+LL+G PGTGKT+LAKAVA A FI + S + Sbjct: 193 P-KGVLLYGLPGTGKTLLAKAVAHRTNATFIRVVGSEL 229
>PEX6_YARLI (P36966) Peroxisomal biogenesis factor 6 (Peroxin-6) (Peroxisome| biosynthesis protein PAY4) Length = 1024 Score = 67.0 bits (162), Expect = 4e-11 Identities = 33/75 (44%), Positives = 46/75 (61%) Frame = +2 Query: 326 PNDIGVTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTML 505 P V +DD+G +E VK+ + + + PL+ P F G K GIL +GPPGTGKT+L Sbjct: 711 PRIPNVGWDDVGGMEGVKKDILDTIETPLKYPHWFSDG--VKKRSGILFYGPPGTGKTLL 768 Query: 506 AKAVATEAGANFINI 550 AKA+AT NF ++ Sbjct: 769 AKAIATTFSLNFFSV 783
>PRS6B_CAEEL (P46502) Probable 26S protease regulatory subunit 6B| Length = 414 Score = 66.6 bits (161), Expect = 5e-11 Identities = 37/93 (39%), Positives = 54/93 (58%), Gaps = 12/93 (12%) Frame = +2 Query: 308 LADVIPPNDIG------------VTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTK 451 L DV+PP +++ DIG L+ K+ ++E V LPL EL+ + + Sbjct: 135 LVDVLPPEADSSIQMLRPDEKPDISYGDIGGLDMQKQEVREAVELPLTHGELYQQIGIDP 194 Query: 452 PCKGILLFGPPGTGKTMLAKAVATEAGANFINI 550 P +G+L++GPPG GKTMLAKAVA A+FI + Sbjct: 195 P-RGVLMYGPPGCGKTMLAKAVAANTAASFIRV 226
>FTSH_CYAME (Q9TJ83) Cell division protein ftsH homolog (EC 3.4.24.-) (FtsHCP)| Length = 603 Score = 66.6 bits (161), Expect = 5e-11 Identities = 37/74 (50%), Positives = 47/74 (63%) Frame = +2 Query: 338 GVTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAV 517 G+ FDD+ +E KE L E+V L+ P F + P KG+LL GPPGTGKT+LAKA+ Sbjct: 150 GIMFDDVAGIEEAKEELAEVVAF-LKNPSKFLAVGASIP-KGVLLVGPPGTGKTLLAKAI 207 Query: 518 ATEAGANFINISMS 559 A EA F +IS S Sbjct: 208 AGEASVPFFSISGS 221
>PEX1_HUMAN (O43933) Peroxisome biogenesis factor 1 (Peroxin-1) (Peroxisome| biogenesis disorder protein 1) Length = 1283 Score = 66.2 bits (160), Expect = 6e-11 Identities = 34/75 (45%), Positives = 49/75 (65%) Frame = +2 Query: 326 PNDIGVTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTML 505 P D+G +D IG L V++ L + + LP + PELF + + GILL+GPPGTGKT+L Sbjct: 834 PRDLG--WDKIGGLHEVRQILMDTIQLPAKYPELFANLPIRQRT-GILLYGPPGTGKTLL 890 Query: 506 AKAVATEAGANFINI 550 A +A E+ NFI++ Sbjct: 891 AGVIARESRMNFISV 905
>PRS7_XENLA (P46472) 26S protease regulatory subunit 7 (MSS1 protein)| Length = 433 Score = 66.2 bits (160), Expect = 6e-11 Identities = 35/75 (46%), Positives = 46/75 (61%) Frame = +2 Query: 341 VTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVA 520 VT+ D+G + E L+E+V PL PE F + P KG+LLFGPPGTGKT+ A+AVA Sbjct: 172 VTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPP-KGVLLFGPPGTGKTLCARAVA 230 Query: 521 TEAGANFINISMSSI 565 A FI + S + Sbjct: 231 NRTDACFIRVIGSEL 245
>PRS7_MOUSE (P46471) 26S protease regulatory subunit 7 (MSS1 protein)| Length = 432 Score = 66.2 bits (160), Expect = 6e-11 Identities = 35/75 (46%), Positives = 46/75 (61%) Frame = +2 Query: 341 VTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVA 520 VT+ D+G + E L+E+V PL PE F + P KG+LLFGPPGTGKT+ A+AVA Sbjct: 171 VTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPP-KGVLLFGPPGTGKTLCARAVA 229 Query: 521 TEAGANFINISMSSI 565 A FI + S + Sbjct: 230 NRTDACFIRVIGSEL 244
>PRS7_HUMAN (P35998) 26S protease regulatory subunit 7 (MSS1 protein)| Length = 432 Score = 66.2 bits (160), Expect = 6e-11 Identities = 35/75 (46%), Positives = 46/75 (61%) Frame = +2 Query: 341 VTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVA 520 VT+ D+G + E L+E+V PL PE F + P KG+LLFGPPGTGKT+ A+AVA Sbjct: 171 VTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPP-KGVLLFGPPGTGKTLCARAVA 229 Query: 521 TEAGANFINISMSSI 565 A FI + S + Sbjct: 230 NRTDACFIRVIGSEL 244
>TBP7_CAEEL (P54816) TAT-binding homolog 7| Length = 1242 Score = 66.2 bits (160), Expect = 6e-11 Identities = 36/85 (42%), Positives = 57/85 (67%), Gaps = 3/85 (3%) Frame = +2 Query: 311 ADVIPPN-DIGVTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPG 487 +D+ P + D V FD +G L + ++LKE+V+ P+ PE+F K ++ P KG++ +GPPG Sbjct: 377 SDIDPMSVDSSVGFDQVGGLGHHIQSLKEVVLFPMLYPEVFEKFRINPP-KGVVFYGPPG 435 Query: 488 TGKTMLAKAVATEA--GANFINISM 556 TGKT++A+A+A E GAN + M Sbjct: 436 TGKTLVARALANECRRGANKVAFFM 460
>ATAD2_MOUSE (Q8CDM1) ATPase family AAA domain-containing protein 2| Length = 1040 Score = 66.2 bits (160), Expect = 6e-11 Identities = 36/74 (48%), Positives = 49/74 (66%), Gaps = 1/74 (1%) Frame = +2 Query: 308 LADVIPPN-DIGVTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPP 484 LADV P D V FD +G L + LKE+V+ PL PE+F K ++ P +G L +GPP Sbjct: 66 LADVDPMQLDTSVRFDSVGGLSSHIAALKEMVVFPLLYPEVFEKFKIQPP-RGCLFYGPP 124 Query: 485 GTGKTMLAKAVATE 526 GTGKT++A+A+A E Sbjct: 125 GTGKTLVARALANE 138
>PRS8_XENLA (P46470) 26S protease regulatory subunit 8 (SUG1 homolog) (xSUG1)| Length = 461 Score = 66.2 bits (160), Expect = 6e-11 Identities = 33/74 (44%), Positives = 50/74 (67%) Frame = +2 Query: 344 TFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVAT 523 T++ IG L+ + +KE++ LP++ PE F + +P KG+LL+GPPGTGKT+LA+AVA Sbjct: 142 TYEMIGGLDKQIKEIKEVIELPVKHPEHFEALGIAQP-KGVLLYGPPGTGKTLLARAVAH 200 Query: 524 EAGANFINISMSSI 565 FI +S S + Sbjct: 201 HTDCTFIRVSGSEL 214
>FTSH_CYACA (O19922) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 614 Score = 66.2 bits (160), Expect = 6e-11 Identities = 37/74 (50%), Positives = 48/74 (64%) Frame = +2 Query: 338 GVTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAV 517 G+ F+D+ +E KE L+E+V L+ F T P KG+LL GPPGTGKT+LAKA+ Sbjct: 167 GIVFEDVAGIEEAKEELQEIVAF-LKDSRKFTNVGATIP-KGVLLVGPPGTGKTLLAKAI 224 Query: 518 ATEAGANFINISMS 559 A EA A F +IS S Sbjct: 225 AGEASAPFFSISGS 238
>PSMR1_HALSA (Q9HNP9) Proteasome-activating nucleotidase 1 (Proteasome| regulatory subunit 1) Length = 411 Score = 65.5 bits (158), Expect = 1e-10 Identities = 36/75 (48%), Positives = 48/75 (64%) Frame = +2 Query: 341 VTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVA 520 VT+ DIG L++ ++E V PL PE F +P G+LL GPPGTGKTMLAKAVA Sbjct: 149 VTYADIGGLDDQLREVREAVEDPLVNPEKF-DAVGVEPPSGVLLHGPPGTGKTMLAKAVA 207 Query: 521 TEAGANFINISMSSI 565 + A+FI ++ S + Sbjct: 208 NQTDASFIKMAGSEL 222
>PRS7_RAT (Q63347) 26S protease regulatory subunit 7 (MSS1 protein)| Length = 432 Score = 65.5 bits (158), Expect = 1e-10 Identities = 35/75 (46%), Positives = 46/75 (61%) Frame = +2 Query: 341 VTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVA 520 VT+ D+G + E L+E+V PL PE F + P KG+LLFGPPGTGKT+ A+AVA Sbjct: 171 VTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPP-KGVLLFGPPGTGKTLCARAVA 229 Query: 521 TEAGANFINISMSSI 565 A FI + S + Sbjct: 230 NRTDACFIPVIGSEL 244
>PRS4_CAEEL (O16368) Probable 26S protease regulatory subunit 4| Length = 443 Score = 65.5 bits (158), Expect = 1e-10 Identities = 33/74 (44%), Positives = 49/74 (66%) Frame = +2 Query: 344 TFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVAT 523 T+ D+G L+ + +KE V LPL PE + + + +P KG++L+G PGTGKT+LAKAVA Sbjct: 186 TYADVGGLDQQIQEIKEAVELPLTHPEYYEEMGI-RPPKGVILYGCPGTGKTLLAKAVAN 244 Query: 524 EAGANFINISMSSI 565 + A F+ I S + Sbjct: 245 QTSATFLRIVGSEL 258
>PSMR2_HALSA (Q9HRW6) Proteasome-activating nucleotidase 2 (Proteasome| regulatory subunit 2) Length = 407 Score = 65.1 bits (157), Expect = 1e-10 Identities = 33/75 (44%), Positives = 51/75 (68%) Frame = +2 Query: 341 VTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVA 520 V ++DIG L++ ++E V LP++ P LF + P G+LL GPPGTGKT++AKAVA Sbjct: 146 VGYEDIGGLDDQLREVRETVELPMKDPGLFETVGINPP-SGVLLHGPPGTGKTLMAKAVA 204 Query: 521 TEAGANFINISMSSI 565 ++ A+FI ++ S + Sbjct: 205 SQTDASFIKMAGSEL 219
>MEI1_CAEEL (P34808) Meiotic spindle formation protein mei-1 (EC 3.6.4.3)| (Katanin ATPase-containing subunit) Length = 472 Score = 65.1 bits (157), Expect = 1e-10 Identities = 32/75 (42%), Positives = 49/75 (65%) Frame = +2 Query: 341 VTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVA 520 ++ DDI + +VK+ L E V LPL PE F L P K ++L GPPGTGKT++A+A+A Sbjct: 190 MSLDDIIGMHDVKQVLHEAVTLPLLVPEFF--QGLRSPWKAMVLAGPPGTGKTLIARAIA 247 Query: 521 TEAGANFINISMSSI 565 +E+ + F +S + + Sbjct: 248 SESSSTFFTVSSTDL 262
>FTSH_BUCBP (Q89AF2) Cell division protein ftsH (EC 3.4.24.-)| Length = 610 Score = 64.7 bits (156), Expect = 2e-10 Identities = 38/83 (45%), Positives = 51/83 (61%) Frame = +2 Query: 311 ADVIPPNDIGVTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGT 490 A ++P + + +TF D+ + KE ++ELV L+ P F K P KGIL+ GPPGT Sbjct: 139 ARMLPEDQVKITFSDVAGCDEAKEEVQELVEY-LKEPSRFQKLGGKIP-KGILMVGPPGT 196 Query: 491 GKTMLAKAVATEAGANFINISMS 559 GKT+LAKA+A EA F IS S Sbjct: 197 GKTLLAKAIAGEAKVPFFTISGS 219
>PRS6A_ARATH (O04019) 26S protease regulatory subunit 6A homolog (TAT-binding| protein homolog 1) (TBP-1) Length = 419 Score = 64.3 bits (155), Expect = 2e-10 Identities = 36/92 (39%), Positives = 57/92 (61%), Gaps = 3/92 (3%) Frame = +2 Query: 287 NEFEKRLLA---DVIPPNDIGVTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPC 457 +E++ R+ A D P D ++DIG LE + L E ++LP+ E F K + +P Sbjct: 146 SEYDSRVKAMEVDEKPTED----YNDIGGLEKQIQELVEAIVLPMTHKEQFEKLGI-RPP 200 Query: 458 KGILLFGPPGTGKTMLAKAVATEAGANFINIS 553 KG+LL+GPPGTGKT++A+A A + A F+ ++ Sbjct: 201 KGVLLYGPPGTGKTLMARACAAQTNATFLKLA 232
>PRS4_ORYSA (P46466) 26S protease regulatory subunit 4 homolog (TAT-binding| protein homolog 2) Length = 448 Score = 64.3 bits (155), Expect = 2e-10 Identities = 33/74 (44%), Positives = 48/74 (64%) Frame = +2 Query: 344 TFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVAT 523 ++ DIG L+ + +KE V LPL PEL+ + +P KG++L+G PGTGKT+LAKAVA Sbjct: 191 SYADIGGLDAQIQEIKEAVELPLTHPELY-EDIGIRPPKGVILYGEPGTGKTLLAKAVAN 249 Query: 524 EAGANFINISMSSI 565 A F+ + S + Sbjct: 250 STSATFLRVVGSEL 263
>PRS7_CAEEL (Q18787) Probable 26S protease regulatory subunit 7| Length = 435 Score = 64.3 bits (155), Expect = 2e-10 Identities = 33/75 (44%), Positives = 47/75 (62%) Frame = +2 Query: 341 VTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVA 520 VT+ D+G ++ E L+E+V PL PE + + P KG+LL+GPPGTGKT+ A+AVA Sbjct: 174 VTYSDVGGCKDQIEKLREVVETPLLHPERYVNLGIEPP-KGVLLYGPPGTGKTLCARAVA 232 Query: 521 TEAGANFINISMSSI 565 A FI + S + Sbjct: 233 NRTDACFIRVIGSEL 247
>PRS6A_SCHPO (O14126) 26S protease regulatory subunit 6A| Length = 438 Score = 64.3 bits (155), Expect = 2e-10 Identities = 32/69 (46%), Positives = 47/69 (68%) Frame = +2 Query: 347 FDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATE 526 + DIG L E L E ++LP+Q+ + F K + KP KG L+FGPPGTGKT+LA+A A + Sbjct: 184 YSDIGGLSKQIEELFEAIVLPMQQADKFRKLGV-KPPKGCLMFGPPGTGKTLLARACAAQ 242 Query: 527 AGANFINIS 553 + A F+ ++ Sbjct: 243 SNATFLKLA 251
>CD48C_ARATH (Q9SS94) Cell division control protein 48 homolog C (AtCDC48c)| Length = 820 Score = 63.9 bits (154), Expect = 3e-10 Identities = 34/76 (44%), Positives = 45/76 (59%) Frame = +2 Query: 338 GVTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAV 517 G TF D G ++ + + L+ V+ P+ PE F K + KP GIL GPPG GKT LA A+ Sbjct: 229 GPTFKDFGGIKKILDELEMNVLFPILNPEPFKKIGV-KPPSGILFHGPPGCGKTKLANAI 287 Query: 518 ATEAGANFINISMSSI 565 A EAG F IS + + Sbjct: 288 ANEAGVPFYKISATEV 303 Score = 62.8 bits (151), Expect = 7e-10 Identities = 29/70 (41%), Positives = 48/70 (68%) Frame = +2 Query: 341 VTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVA 520 V +DD+G L++++ ++ P+++P+++ K G LL+GPPG GKT++AKA A Sbjct: 525 VKWDDVGGLDHLRLQFNRYIVRPIKKPDIY-KAFGVDLETGFLLYGPPGCGKTLIAKAAA 583 Query: 521 TEAGANFINI 550 EAGANF++I Sbjct: 584 NEAGANFMHI 593
>PRS6A_BRACM (O23894) 26S protease regulatory subunit 6A homolog (TAT-binding| protein homolog 1) (TBP-1) Length = 424 Score = 63.9 bits (154), Expect = 3e-10 Identities = 36/92 (39%), Positives = 57/92 (61%), Gaps = 3/92 (3%) Frame = +2 Query: 287 NEFEKRLLA---DVIPPNDIGVTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPC 457 +E++ R+ A D P D ++DIG LE + L E ++LP+ E F K + +P Sbjct: 151 SEYDSRVKAMEVDEKPTED----YNDIGGLEKQIQELVEAIVLPMTHKERFEKLGV-RPP 205 Query: 458 KGILLFGPPGTGKTMLAKAVATEAGANFINIS 553 KG+LL+GPPGTGKT++A+A A + A F+ ++ Sbjct: 206 KGVLLYGPPGTGKTLMARACAAQTNATFLKLA 237
>CD48B_ARATH (Q9ZPR1) Cell division control protein 48 homolog B (AtCDC48b)| Length = 603 Score = 63.5 bits (153), Expect = 4e-10 Identities = 32/75 (42%), Positives = 50/75 (66%) Frame = +2 Query: 341 VTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVA 520 VT+DD+G L+++K+ L++ V P++ F K ++ P +GILL GPPG KT LAKA A Sbjct: 283 VTWDDVGGLKDLKKKLQQAVEWPIKHSAAFVKMGIS-PMRGILLHGPPGCSKTTLAKAAA 341 Query: 521 TEAGANFINISMSSI 565 A A+F ++S + + Sbjct: 342 NAAQASFFSLSCAEL 356 Score = 53.1 bits (126), Expect = 5e-07 Identities = 29/71 (40%), Positives = 43/71 (60%) Frame = +2 Query: 353 DIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEAG 532 +IG E + L+EL++ P + P L + K +G+LL+GPPGTGKT L +AV E Sbjct: 23 EIGGNERALQALRELIIFPFRYP-LEARTLGLKWPRGLLLYGPPGTGKTSLVRAVVQECD 81 Query: 533 ANFINISMSSI 565 A+ I +S S+ Sbjct: 82 AHLIVLSPHSV 92
>PRS6A_LYCES (P54776) 26S protease regulatory subunit 6A homolog (TAT-binding| protein homolog 1) (TBP-1) (Mg(2+)-dependent ATPase 1) (LEMA-1) Length = 423 Score = 63.5 bits (153), Expect = 4e-10 Identities = 36/92 (39%), Positives = 56/92 (60%), Gaps = 3/92 (3%) Frame = +2 Query: 287 NEFEKRLLA---DVIPPNDIGVTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPC 457 +E++ R+ A D P D + DIG LE + L E ++LP+ E F K + +P Sbjct: 150 SEYDSRVKAMEVDEKPTED----YHDIGGLEKQIQELVEAIVLPMTHQERFQKLGV-RPP 204 Query: 458 KGILLFGPPGTGKTMLAKAVATEAGANFINIS 553 KG+LL+GPPGTGKT++A+A A + A F+ ++ Sbjct: 205 KGVLLYGPPGTGKTLMARACAAQTNATFLKLA 236
>PRS6A_ORYSA (P46465) 26S protease regulatory subunit 6A homolog (TAT-binding| protein homolog 1) (TBP-1) Length = 429 Score = 63.5 bits (153), Expect = 4e-10 Identities = 35/92 (38%), Positives = 57/92 (61%), Gaps = 3/92 (3%) Frame = +2 Query: 287 NEFEKRLLA---DVIPPNDIGVTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPC 457 +E++ R+ A D P D ++DIG LE + L E ++LP+ + F K + +P Sbjct: 156 SEYDSRVKAMEVDEKPTED----YNDIGGLEKQIQELVEAIVLPMTHKDRFQKLGI-RPP 210 Query: 458 KGILLFGPPGTGKTMLAKAVATEAGANFINIS 553 KG+LL+GPPGTGKT++A+A A + A F+ ++ Sbjct: 211 KGVLLYGPPGTGKTLMARACAAQTNATFLKLA 242
>PRS6A_YEAST (P33297) 26S protease regulatory subunit 6A (TAT-binding protein| homolog 1) (TBP-1) Length = 434 Score = 63.2 bits (152), Expect = 5e-10 Identities = 33/89 (37%), Positives = 54/89 (60%) Frame = +2 Query: 287 NEFEKRLLADVIPPNDIGVTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGI 466 +EF+ R+ A + T+ D+G L+ E L E ++LP++R + F + P KG Sbjct: 161 SEFDSRVKAMEVDEKPTE-TYSDVGGLDKQIEELVEAIVLPMKRADKFKDMGIRAP-KGA 218 Query: 467 LLFGPPGTGKTMLAKAVATEAGANFINIS 553 L++GPPGTGKT+LA+A A + A F+ ++ Sbjct: 219 LMYGPPGTGKTLLARACAAQTNATFLKLA 247
>FTSH_AQUAE (O67077) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 634 Score = 62.8 bits (151), Expect = 7e-10 Identities = 36/73 (49%), Positives = 49/73 (67%) Frame = +2 Query: 341 VTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVA 520 VTF D+ +E VKE +KE++ L+ P F K +P KG+LL+G PG GKT+LAKA+A Sbjct: 152 VTFKDVAGIEEVKEEVKEIIEY-LKDPVKFQKLG-GRPPKGVLLYGEPGVGKTLLAKAIA 209 Query: 521 TEAGANFINISMS 559 EA FI++S S Sbjct: 210 GEAHVPFISVSGS 222
>FTSH_STRR6 (P59652) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 652 Score = 62.4 bits (150), Expect = 9e-10 Identities = 39/76 (51%), Positives = 47/76 (61%) Frame = +2 Query: 332 DIGVTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAK 511 DI V F D+ E K+ L E+V L+ P+ F K P G+LL GPPGTGKT+LAK Sbjct: 181 DIKVRFSDVAGAEEEKQELVEVVEF-LKDPKRFTKLGARIPA-GVLLEGPPGTGKTLLAK 238 Query: 512 AVATEAGANFINISMS 559 AVA EAG F +IS S Sbjct: 239 AVAGEAGVPFFSISGS 254
>FTSH_STRPN (O69076) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 652 Score = 62.4 bits (150), Expect = 9e-10 Identities = 39/76 (51%), Positives = 47/76 (61%) Frame = +2 Query: 332 DIGVTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAK 511 DI V F D+ E K+ L E+V L+ P+ F K P G+LL GPPGTGKT+LAK Sbjct: 181 DIKVRFSDVAGAEEEKQELVEVVEF-LKDPKRFTKLGARIPA-GVLLEGPPGTGKTLLAK 238 Query: 512 AVATEAGANFINISMS 559 AVA EAG F +IS S Sbjct: 239 AVAGEAGVPFFSISGS 254
>PRS6B_MANSE (P46507) 26S protease regulatory subunit 6B (ATPase MS73)| Length = 415 Score = 62.4 bits (150), Expect = 9e-10 Identities = 36/93 (38%), Positives = 51/93 (54%), Gaps = 12/93 (12%) Frame = +2 Query: 308 LADVIPPNDIG------------VTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTK 451 L DV+PP V + DIG ++ K+ ++E V LPL EL+ + + Sbjct: 136 LVDVLPPEADSSISMLQADEKPDVQYSDIGGMDTQKQEIREAVELPLTHVELYRQIGIEP 195 Query: 452 PCKGILLFGPPGTGKTMLAKAVATEAGANFINI 550 P +G+L++GPPG GKTMLA AVA A FI + Sbjct: 196 P-RGVLMYGPPGCGKTMLANAVAHHTTAAFIRV 227
>FTSH_RICPR (Q9ZEA2) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 637 Score = 62.4 bits (150), Expect = 9e-10 Identities = 41/88 (46%), Positives = 53/88 (60%), Gaps = 2/88 (2%) Frame = +2 Query: 302 RLLADVIPPNDIGVTFDDIGALENVKETLKELVMLPLQRPELFCK--GQLTKPCKGILLF 475 RLL+D P +TF D+ ++ KE L E+V L+ P F K G++ K C LL Sbjct: 143 RLLSDKGPK----ITFKDVAGIDEAKEELTEIVDF-LRDPSKFQKLGGKIPKGC---LLI 194 Query: 476 GPPGTGKTMLAKAVATEAGANFINISMS 559 GPPGTGKT+LAKA+A EA F +IS S Sbjct: 195 GPPGTGKTLLAKAIAGEANVPFFSISGS 222
>FTSH_RICCN (Q92JJ9) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 637 Score = 62.4 bits (150), Expect = 9e-10 Identities = 41/88 (46%), Positives = 53/88 (60%), Gaps = 2/88 (2%) Frame = +2 Query: 302 RLLADVIPPNDIGVTFDDIGALENVKETLKELVMLPLQRPELFCK--GQLTKPCKGILLF 475 RLL+D P +TF D+ ++ KE L E+V L+ P F K G++ K C LL Sbjct: 143 RLLSDKGPK----ITFKDVAGIDEAKEELTEIVDF-LRDPSKFQKLGGKIPKGC---LLI 194 Query: 476 GPPGTGKTMLAKAVATEAGANFINISMS 559 GPPGTGKT+LAKA+A EA F +IS S Sbjct: 195 GPPGTGKTLLAKAIAGEANVPFFSISGS 222
>PRS6B_DICDI (P34123) 26S protease regulatory subunit 6B homolog (TAT-binding| protein homolog 2) Length = 403 Score = 61.2 bits (147), Expect = 2e-09 Identities = 32/69 (46%), Positives = 45/69 (65%) Frame = +2 Query: 344 TFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVAT 523 ++ DIG + K+ ++E V LPL L+ + + P +G+LL+GPPGTGKTMLAKAVA Sbjct: 148 SYSDIGGGDIQKQEMREAVELPLTHHNLYKQIGIDPP-RGVLLYGPPGTGKTMLAKAVAH 206 Query: 524 EAGANFINI 550 A FI + Sbjct: 207 HTSAAFIRV 215
>PRS6B_RAT (Q63570) 26S protease regulatory subunit 6B (TAT-binding protein 7)| (TBP-7) Length = 418 Score = 61.2 bits (147), Expect = 2e-09 Identities = 37/93 (39%), Positives = 52/93 (55%), Gaps = 12/93 (12%) Frame = +2 Query: 308 LADVIPPNDIG------------VTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTK 451 L DV+PP V + DIG ++ K+ ++E V LPL EL+ + + Sbjct: 139 LVDVLPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDP 198 Query: 452 PCKGILLFGPPGTGKTMLAKAVATEAGANFINI 550 P +G+L++GPPG GKTMLAKAVA A FI + Sbjct: 199 P-RGVLMYGPPGCGKTMLAKAVAHHTTAAFIRV 230
>PRS6B_MOUSE (P54775) 26S protease regulatory subunit 6B (MIP224)| (MB67-interacting protein) (TAT-binding protein 7) (TBP-7) (CIP21) Length = 418 Score = 61.2 bits (147), Expect = 2e-09 Identities = 37/93 (39%), Positives = 52/93 (55%), Gaps = 12/93 (12%) Frame = +2 Query: 308 LADVIPP------------NDIGVTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTK 451 L DV+PP V + DIG ++ K+ ++E V LPL EL+ + + Sbjct: 139 LVDVLPPAADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDP 198 Query: 452 PCKGILLFGPPGTGKTMLAKAVATEAGANFINI 550 P +G+L++GPPG GKTMLAKAVA A FI + Sbjct: 199 P-RGVLMYGPPGCGKTMLAKAVAHHTTAAFIRV 230
>PRS6B_HUMAN (P43686) 26S protease regulatory subunit 6B (MIP224)| (MB67-interacting protein) (TAT-binding protein 7) (TBP-7) Length = 418 Score = 61.2 bits (147), Expect = 2e-09 Identities = 37/93 (39%), Positives = 52/93 (55%), Gaps = 12/93 (12%) Frame = +2 Query: 308 LADVIPPNDIG------------VTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTK 451 L DV+PP V + DIG ++ K+ ++E V LPL EL+ + + Sbjct: 139 LVDVLPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDP 198 Query: 452 PCKGILLFGPPGTGKTMLAKAVATEAGANFINI 550 P +G+L++GPPG GKTMLAKAVA A FI + Sbjct: 199 P-RGVLMYGPPGCGKTMLAKAVAHHTTAAFIRV 230
>FTSH3_SYNY3 (P73437) Cell division protein ftsH homolog 3 (EC 3.4.24.-)| Length = 628 Score = 60.8 bits (146), Expect = 3e-09 Identities = 37/73 (50%), Positives = 45/73 (61%) Frame = +2 Query: 341 VTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVA 520 VTFDD+ +E K L E+V L+ P+ + P KG+LL GPPGTGKT+LAKA A Sbjct: 171 VTFDDVAGVEEAKTELSEVVDF-LKFPQRYTALGAKIP-KGVLLVGPPGTGKTLLAKAAA 228 Query: 521 TEAGANFINISMS 559 EAG F IS S Sbjct: 229 GEAGVPFFIISGS 241
>FTSH_ODOSI (P49825) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 644 Score = 60.8 bits (146), Expect = 3e-09 Identities = 34/76 (44%), Positives = 47/76 (61%) Frame = +2 Query: 332 DIGVTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAK 511 D GV+F DI ++ K +E+V L+ P+ + P KGILL GPPGTGKT+LAK Sbjct: 180 DTGVSFKDIAGIDEAKTEFEEIVSF-LKEPDKYTIVGAKIP-KGILLVGPPGTGKTLLAK 237 Query: 512 AVATEAGANFINISMS 559 A+A EA F +++ S Sbjct: 238 AIANEADVPFFSVAGS 253
>FTSH4_SYNY3 (P72991) Cell division protein ftsH homolog 4 (EC 3.4.24.-)| Length = 616 Score = 60.5 bits (145), Expect = 3e-09 Identities = 37/73 (50%), Positives = 46/73 (63%) Frame = +2 Query: 341 VTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVA 520 VTF D+ +E K L E+V L+ + F + P KG+LL GPPGTGKT+LAKAVA Sbjct: 158 VTFGDVAGIEQAKLELTEVVDF-LKNADRFTELGAKIP-KGVLLVGPPGTGKTLLAKAVA 215 Query: 521 TEAGANFINISMS 559 EAG F +IS S Sbjct: 216 GEAGVPFFSISGS 228
>PR6AA_XENLA (O42587) 26S protease regulatory subunit 6A-A (TAT-binding protein| 6) (TBP-6) Length = 405 Score = 59.7 bits (143), Expect = 6e-09 Identities = 28/69 (40%), Positives = 45/69 (65%) Frame = +2 Query: 347 FDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATE 526 + DIG L+ + L E ++LP+ E F + +P KG+L++GPPGTGKT+LA+A A + Sbjct: 169 YSDIGGLDKQIQELVEAIVLPMNHKEKF-ENLGIQPPKGVLMYGPPGTGKTLLARACAAQ 227 Query: 527 AGANFINIS 553 A F+ ++ Sbjct: 228 TKATFLKLA 236
>PRS6A_MOUSE (O88685) 26S protease regulatory subunit 6A (TAT-binding protein 1)| (TBP-1) Length = 442 Score = 59.7 bits (143), Expect = 6e-09 Identities = 28/69 (40%), Positives = 45/69 (65%) Frame = +2 Query: 347 FDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATE 526 + DIG L+ + L E ++LP+ E F + +P KG+L++GPPGTGKT+LA+A A + Sbjct: 188 YSDIGGLDKQIQELVEAIVLPMNHKEKF-ENLGIQPPKGVLMYGPPGTGKTLLARACAAQ 246 Query: 527 AGANFINIS 553 A F+ ++ Sbjct: 247 TKATFLKLA 255
>PRS6A_RAT (Q63569) 26S protease regulatory subunit 6A (TAT-binding protein 1)| (TBP-1) (Spermatogenic cell/sperm-associated TAT-binding protein homolog SATA) Length = 439 Score = 59.7 bits (143), Expect = 6e-09 Identities = 28/69 (40%), Positives = 45/69 (65%) Frame = +2 Query: 347 FDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATE 526 + DIG L+ + L E ++LP+ E F + +P KG+L++GPPGTGKT+LA+A A + Sbjct: 185 YSDIGGLDKQIQELVEAIVLPMNHKEKF-ENLGIQPPKGVLMYGPPGTGKTLLARACAAQ 243 Query: 527 AGANFINIS 553 A F+ ++ Sbjct: 244 TKATFLKLA 252
>PRS6A_HUMAN (P17980) 26S protease regulatory subunit 6A (TAT-binding protein 1)| (TBP-1) (Proteasome subunit P50) Length = 439 Score = 59.7 bits (143), Expect = 6e-09 Identities = 28/69 (40%), Positives = 45/69 (65%) Frame = +2 Query: 347 FDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATE 526 + DIG L+ + L E ++LP+ E F + +P KG+L++GPPGTGKT+LA+A A + Sbjct: 185 YSDIGGLDKQIQELVEAIVLPMNHKEKF-ENLGIQPPKGVLMYGPPGTGKTLLARACAAQ 243 Query: 527 AGANFINIS 553 A F+ ++ Sbjct: 244 TKATFLKLA 252
>FTSH_BUCAP (Q8K9G8) Cell division protein ftsH (EC 3.4.24.-)| Length = 613 Score = 59.7 bits (143), Expect = 6e-09 Identities = 38/83 (45%), Positives = 48/83 (57%) Frame = +2 Query: 311 ADVIPPNDIGVTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGT 490 A ++ + I TF D+ + KE + ELV L+ P F K P KGIL+ GPPGT Sbjct: 139 ARMLSEDQIQTTFADVAGCDEAKEEVSELVEY-LKEPSRFQKLGGKIP-KGILMVGPPGT 196 Query: 491 GKTMLAKAVATEAGANFINISMS 559 GKT+LAKA+A EA F IS S Sbjct: 197 GKTLLAKAIAGEAKVPFFTISGS 219
>PR6AB_XENLA (O42586) 26S protease regulatory subunit 6A-B (TAT-binding protein| 10) (TBP-10) Length = 404 Score = 59.7 bits (143), Expect = 6e-09 Identities = 28/69 (40%), Positives = 45/69 (65%) Frame = +2 Query: 347 FDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATE 526 + DIG L+ + L E ++LP+ E F + +P KG+L++GPPGTGKT+LA+A A + Sbjct: 150 YSDIGGLDKQIQELVEAIVLPMNHKEKF-ENLGIQPPKGVLMYGPPGTGKTLLARACAAQ 208 Query: 527 AGANFINIS 553 A F+ ++ Sbjct: 209 TKATFLKLA 217
>FTSH_BUCAI (P57462) Cell division protein ftsH (EC 3.4.24.-)| Length = 611 Score = 59.7 bits (143), Expect = 6e-09 Identities = 38/83 (45%), Positives = 48/83 (57%) Frame = +2 Query: 311 ADVIPPNDIGVTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGT 490 A ++ + I TF D+ + KE + ELV L+ P F K P KGIL+ GPPGT Sbjct: 139 ARMLSEDQIQTTFADVAGCDEAKEEVSELVEY-LKEPSRFQKLGGKIP-KGILMVGPPGT 196 Query: 491 GKTMLAKAVATEAGANFINISMS 559 GKT+LAKA+A EA F IS S Sbjct: 197 GKTLLAKAIAGEAKVPFFTISGS 219
>FTSH_SHIFL (P0AAI4) Cell division protein ftsH (EC 3.4.24.-)| Length = 644 Score = 58.9 bits (141), Expect = 1e-08 Identities = 37/83 (44%), Positives = 48/83 (57%) Frame = +2 Query: 311 ADVIPPNDIGVTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGT 490 A ++ + I TF D+ + KE + ELV L+ P F K P KG+L+ GPPGT Sbjct: 139 ARMLTEDQIKTTFADVAGCDEAKEEVAELVEY-LREPSRFQKLGGKIP-KGVLMVGPPGT 196 Query: 491 GKTMLAKAVATEAGANFINISMS 559 GKT+LAKA+A EA F IS S Sbjct: 197 GKTLLAKAIAGEAKVPFFTISGS 219
>FTSH_SALTY (P63343) Cell division protease ftsH (EC 3.4.24.-)| Length = 644 Score = 58.9 bits (141), Expect = 1e-08 Identities = 37/83 (44%), Positives = 48/83 (57%) Frame = +2 Query: 311 ADVIPPNDIGVTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGT 490 A ++ + I TF D+ + KE + ELV L+ P F K P KG+L+ GPPGT Sbjct: 139 ARMLTEDQIKTTFADVAGCDEAKEEVAELVEY-LREPSRFQKLGGKIP-KGVLMVGPPGT 196 Query: 491 GKTMLAKAVATEAGANFINISMS 559 GKT+LAKA+A EA F IS S Sbjct: 197 GKTLLAKAIAGEAKVPFFTISGS 219
>FTSH_SALTI (P63344) Cell division protease ftsH (EC 3.4.24.-)| Length = 644 Score = 58.9 bits (141), Expect = 1e-08 Identities = 37/83 (44%), Positives = 48/83 (57%) Frame = +2 Query: 311 ADVIPPNDIGVTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGT 490 A ++ + I TF D+ + KE + ELV L+ P F K P KG+L+ GPPGT Sbjct: 139 ARMLTEDQIKTTFADVAGCDEAKEEVAELVEY-LREPSRFQKLGGKIP-KGVLMVGPPGT 196 Query: 491 GKTMLAKAVATEAGANFINISMS 559 GKT+LAKA+A EA F IS S Sbjct: 197 GKTLLAKAIAGEAKVPFFTISGS 219
>FTSH_ECOLI (P0AAI3) Cell division protein ftsH (EC 3.4.24.-)| Length = 644 Score = 58.9 bits (141), Expect = 1e-08 Identities = 37/83 (44%), Positives = 48/83 (57%) Frame = +2 Query: 311 ADVIPPNDIGVTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGT 490 A ++ + I TF D+ + KE + ELV L+ P F K P KG+L+ GPPGT Sbjct: 139 ARMLTEDQIKTTFADVAGCDEAKEEVAELVEY-LREPSRFQKLGGKIP-KGVLMVGPPGT 196 Query: 491 GKTMLAKAVATEAGANFINISMS 559 GKT+LAKA+A EA F IS S Sbjct: 197 GKTLLAKAIAGEAKVPFFTISGS 219
>FTSH_ECO57 (Q8X9L0) Cell division protease ftsH (EC 3.4.24.-)| Length = 644 Score = 58.9 bits (141), Expect = 1e-08 Identities = 37/83 (44%), Positives = 48/83 (57%) Frame = +2 Query: 311 ADVIPPNDIGVTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGT 490 A ++ + I TF D+ + KE + ELV L+ P F K P KG+L+ GPPGT Sbjct: 139 ARMLTEDQIKTTFADVAGCDEAKEEVAELVEY-LREPSRFQKLGGKIP-KGVLMVGPPGT 196 Query: 491 GKTMLAKAVATEAGANFINISMS 559 GKT+LAKA+A EA F IS S Sbjct: 197 GKTLLAKAIAGEAKVPFFTISGS 219
>FTSH2_ARATH (Q9FH02) Cell division protein ftsH homolog 2, chloroplast| precursor (EC 3.4.24.-) Length = 704 Score = 57.8 bits (138), Expect = 2e-08 Identities = 34/76 (44%), Positives = 46/76 (60%) Frame = +2 Query: 332 DIGVTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAK 511 + GVTF D+ + K L+E+V L+ P+ + P KG LL GPPGTGKT+LA+ Sbjct: 244 ETGVTFGDVAGADQAKLELQEVVDF-LKNPDKYTALGAKIP-KGCLLVGPPGTGKTLLAR 301 Query: 512 AVATEAGANFINISMS 559 AVA EAG F + + S Sbjct: 302 AVAGEAGVPFFSCAAS 317
>PEX1_YEAST (P24004) Peroxisome biosynthesis protein PAS1 (Peroxin-1)| Length = 1043 Score = 57.4 bits (137), Expect = 3e-08 Identities = 34/86 (39%), Positives = 47/86 (54%) Frame = +2 Query: 293 FEKRLLADVIPPNDIGVTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILL 472 F L V + + + DIGAL N K+ L E + P + +F L + GILL Sbjct: 678 FTPSALRGVKLTKETNIKWGDIGALANAKDVLLETLEWPTKYEPIFVNCPL-RLRSGILL 736 Query: 473 FGPPGTGKTMLAKAVATEAGANFINI 550 +G PG GKT+LA AVA + G NFI++ Sbjct: 737 YGYPGCGKTLLASAVAQQCGLNFISV 762
>FTSH_TOBAC (O82150) Cell division protein ftsH homolog, chloroplast precursor| (EC 3.4.24.-) (DS9) Length = 714 Score = 57.4 bits (137), Expect = 3e-08 Identities = 34/76 (44%), Positives = 46/76 (60%) Frame = +2 Query: 332 DIGVTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAK 511 + GVTF D+ + K L+E+V L+ P+ + P KG LL GPPGTGKT+LA+ Sbjct: 247 ETGVTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIP-KGCLLVGPPGTGKTLLAR 304 Query: 512 AVATEAGANFINISMS 559 AVA EAG F + + S Sbjct: 305 AVAGEAGVPFFSCAAS 320
>FTSH_CAPAN (Q39444) Cell division protein ftsH homolog, chloroplast precursor| (EC 3.4.24.-) (Fragment) Length = 662 Score = 57.4 bits (137), Expect = 3e-08 Identities = 34/76 (44%), Positives = 46/76 (60%) Frame = +2 Query: 332 DIGVTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAK 511 + GVTF D+ + K L+E+V L+ P+ + P KG LL GPPGTGKT+LA+ Sbjct: 224 ETGVTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIP-KGCLLVGPPGTGKTLLAR 281 Query: 512 AVATEAGANFINISMS 559 AVA EAG F + + S Sbjct: 282 AVAGEAGVPFFSCAAS 297
>FTSH_MEDSA (Q9BAE0) Cell division protein ftsH homolog, chloroplast precursor| (EC 3.4.24.-) Length = 706 Score = 57.4 bits (137), Expect = 3e-08 Identities = 34/76 (44%), Positives = 46/76 (60%) Frame = +2 Query: 332 DIGVTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAK 511 + GVTF D+ + K L+E+V L+ P+ + P KG LL GPPGTGKT+LA+ Sbjct: 247 ETGVTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIP-KGCLLVGPPGTGKTLLAR 304 Query: 512 AVATEAGANFINISMS 559 AVA EAG F + + S Sbjct: 305 AVAGEAGTPFFSCAAS 320
>FTSH_MYCLE (Q9CD58) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 787 Score = 57.4 bits (137), Expect = 3e-08 Identities = 36/74 (48%), Positives = 45/74 (60%), Gaps = 2/74 (2%) Frame = +2 Query: 344 TFDDIGALENVKETLKELVMLPLQRPELFCKGQL--TKPCKGILLFGPPGTGKTMLAKAV 517 TF D+ ++ E L E+ LQ P C+ Q K KG+LL+GPPGTGKT+LA+AV Sbjct: 161 TFADVAGVDEAVEELYEIKDF-LQNP---CRYQTLGAKIPKGVLLYGPPGTGKTLLARAV 216 Query: 518 ATEAGANFINISMS 559 A EAG F IS S Sbjct: 217 AGEAGVPFFTISGS 230
>Y2139_MYCBO (P63346) Putative AAA-family ATPase Mb2139c| Length = 609 Score = 57.0 bits (136), Expect = 4e-08 Identities = 29/60 (48%), Positives = 41/60 (68%) Frame = +2 Query: 341 VTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVA 520 V++ DIG L E +++ V LP EL+ + L +P KG+LL+GPPG GKT++AKAVA Sbjct: 249 VSYADIGGLSRQIEQIRDAVELPFLHKELYREYSL-RPPKGVLLYGPPGCGKTLIAKAVA 307
>Y2115_MYCTU (P63345) Putative AAA-family ATPase Rv2115c/MT2175| Length = 609 Score = 57.0 bits (136), Expect = 4e-08 Identities = 29/60 (48%), Positives = 41/60 (68%) Frame = +2 Query: 341 VTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVA 520 V++ DIG L E +++ V LP EL+ + L +P KG+LL+GPPG GKT++AKAVA Sbjct: 249 VSYADIGGLSRQIEQIRDAVELPFLHKELYREYSL-RPPKGVLLYGPPGCGKTLIAKAVA 307
>Y1316_MYCLE (P46509) Putative AAA-family ATPase ML1316| Length = 609 Score = 57.0 bits (136), Expect = 4e-08 Identities = 29/60 (48%), Positives = 41/60 (68%) Frame = +2 Query: 341 VTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVA 520 V++ DIG L E +++ V LP EL+ + L +P KG+LL+GPPG GKT++AKAVA Sbjct: 249 VSYQDIGGLTRQIEQIRDAVELPFLHKELYREYAL-RPPKGVLLYGPPGCGKTLIAKAVA 307
>FTSH_MYCTU (P0A4V8) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 760 Score = 57.0 bits (136), Expect = 4e-08 Identities = 34/72 (47%), Positives = 44/72 (61%) Frame = +2 Query: 344 TFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVAT 523 TF D+ ++ E L E+ LQ P + + K KG+LL+GPPGTGKT+LA+AVA Sbjct: 161 TFADVAGVDEAVEELYEIKDF-LQNPSRY-QALGAKIPKGVLLYGPPGTGKTLLARAVAG 218 Query: 524 EAGANFINISMS 559 EAG F IS S Sbjct: 219 EAGVPFFTISGS 230
>FTSH_MYCBO (P0A4V9) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 760 Score = 57.0 bits (136), Expect = 4e-08 Identities = 34/72 (47%), Positives = 44/72 (61%) Frame = +2 Query: 344 TFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVAT 523 TF D+ ++ E L E+ LQ P + + K KG+LL+GPPGTGKT+LA+AVA Sbjct: 161 TFADVAGVDEAVEELYEIKDF-LQNPSRY-QALGAKIPKGVLLYGPPGTGKTLLARAVAG 218 Query: 524 EAGANFINISMS 559 EAG F IS S Sbjct: 219 EAGVPFFTISGS 230
>FTSH_BACSU (P37476) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 637 Score = 57.0 bits (136), Expect = 4e-08 Identities = 35/73 (47%), Positives = 44/73 (60%) Frame = +2 Query: 341 VTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVA 520 V F D+ + K+ L E+V L+ P F + P KG+LL GPPGTGKT+LAKA A Sbjct: 158 VKFKDVAGADEEKQELVEVVEF-LKDPRKFAELGARIP-KGVLLVGPPGTGKTLLAKACA 215 Query: 521 TEAGANFINISMS 559 EAG F +IS S Sbjct: 216 GEAGVPFFSISGS 228
>FTSH1_HAEIN (P71377) Cell division protein ftsH homolog 1 (EC 3.4.24.-)| Length = 635 Score = 56.6 bits (135), Expect = 5e-08 Identities = 36/83 (43%), Positives = 49/83 (59%) Frame = +2 Query: 311 ADVIPPNDIGVTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGT 490 A ++ + I VTF D+ + KE + E+V L+ P F + K KGIL+ GPPGT Sbjct: 138 AKMLNQDQIKVTFADVAGCDEAKEEVGEIVDF-LRDPNKF-QNLGGKIPKGILMVGPPGT 195 Query: 491 GKTMLAKAVATEAGANFINISMS 559 GKT+LA+A+A EA F IS S Sbjct: 196 GKTLLARAIAGEAKVPFFTISGS 218
>FTSH_MYCPN (P75120) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 709 Score = 56.6 bits (135), Expect = 5e-08 Identities = 32/67 (47%), Positives = 43/67 (64%) Frame = +2 Query: 341 VTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVA 520 V FD+I L+ K L E+V L+ P + + P +G++L+GPPGTGKT+LAKAVA Sbjct: 225 VRFDNIAGLQEEKHELLEIVDY-LKNPLKYAQMGARSP-RGVILYGPPGTGKTLLAKAVA 282 Query: 521 TEAGANF 541 EAG F Sbjct: 283 GEAGVPF 289
>PEX1_PICPA (P46463) Peroxisome biosynthesis protein PAS1 (Peroxin-1)| Length = 1157 Score = 56.2 bits (134), Expect = 6e-08 Identities = 32/70 (45%), Positives = 42/70 (60%) Frame = +2 Query: 341 VTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVA 520 V +DDIG L + K L E + P + +F L + GILL+G PG GKT+LA AVA Sbjct: 796 VRWDDIGGLRDAKSILLETLEWPTKYAPIFSSCPL-RLRSGILLYGYPGCGKTLLASAVA 854 Query: 521 TEAGANFINI 550 + G NFI+I Sbjct: 855 AQCGLNFISI 864
>FTSH_HELPY (P71408) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 632 Score = 56.2 bits (134), Expect = 6e-08 Identities = 35/74 (47%), Positives = 45/74 (60%) Frame = +2 Query: 341 VTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVA 520 V F+D+ E KE + E+V L+ PE + P KG+LL GPPGTGKT+LAKAVA Sbjct: 167 VRFNDMAGNEEAKEEVVEIVDF-LKYPERYANLGAKIP-KGVLLVGPPGTGKTLLAKAVA 224 Query: 521 TEAGANFINISMSS 562 EA F ++ SS Sbjct: 225 GEAHVPFFSMGGSS 238
>FTSH_HELPJ (Q9ZM66) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 632 Score = 56.2 bits (134), Expect = 6e-08 Identities = 35/74 (47%), Positives = 45/74 (60%) Frame = +2 Query: 341 VTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVA 520 V F+D+ E KE + E+V L+ PE + P KG+LL GPPGTGKT+LAKAVA Sbjct: 167 VRFNDMAGNEEAKEEVVEIVDF-LKYPERYANLGAKIP-KGVLLVGPPGTGKTLLAKAVA 224 Query: 521 TEAGANFINISMSS 562 EA F ++ SS Sbjct: 225 GEAHVPFFSMGGSS 238
>FTSH_HELFE (O32617) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 638 Score = 55.8 bits (133), Expect = 8e-08 Identities = 34/74 (45%), Positives = 45/74 (60%) Frame = +2 Query: 341 VTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVA 520 V F+D+ E KE + E+V L+ P+ + P KG+LL GPPGTGKT+LAKAVA Sbjct: 173 VRFNDMAGNEEAKEEVVEIVDF-LKYPDRYASLGAKIP-KGVLLVGPPGTGKTLLAKAVA 230 Query: 521 TEAGANFINISMSS 562 EA F ++ SS Sbjct: 231 GEASVPFFSMGGSS 244
>FTSH1_ARATH (Q39102) Cell division protein ftsH homolog 1, chloroplast| precursor (EC 3.4.24.-) Length = 716 Score = 55.8 bits (133), Expect = 8e-08 Identities = 33/76 (43%), Positives = 46/76 (60%) Frame = +2 Query: 332 DIGVTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAK 511 + GV+F D+ + K L+E+V L+ P+ + P KG LL GPPGTGKT+LA+ Sbjct: 256 ETGVSFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIP-KGCLLVGPPGTGKTLLAR 313 Query: 512 AVATEAGANFINISMS 559 AVA EAG F + + S Sbjct: 314 AVAGEAGVPFFSCAAS 329
>SPG7_HUMAN (Q9UQ90) Paraplegin (EC 3.4.24.-) (Spastic paraplegia protein 7)| Length = 795 Score = 55.8 bits (133), Expect = 8e-08 Identities = 33/69 (47%), Positives = 42/69 (60%) Frame = +2 Query: 338 GVTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAV 517 GV+F D+ + K ++E V L+ PE F + P KG LL GPPG GKT+LAKAV Sbjct: 305 GVSFKDVAGMHEAKLEVREFVDY-LKSPERFLQLGAKVP-KGALLLGPPGCGKTLLAKAV 362 Query: 518 ATEAGANFI 544 ATEA F+ Sbjct: 363 ATEAQVPFL 371
>YMEL1_RAT (Q925S8) ATP-dependent metalloprotease YME1L1 (EC 3.4.24.-)| (YME1-like protein 1) (ATP-dependent metalloprotease FtsH1) (Meg-4) Length = 715 Score = 55.5 bits (132), Expect = 1e-07 Identities = 36/75 (48%), Positives = 47/75 (62%), Gaps = 2/75 (2%) Frame = +2 Query: 341 VTFDDIGALENVKETLKELVMLPLQRPELFCK--GQLTKPCKGILLFGPPGTGKTMLAKA 514 VTF+ + +E K+ L+E+V L+ P+ F G+L K GILL GPPGTGKT+LA+A Sbjct: 278 VTFEHVKGVEEAKQELQEVVEF-LKNPQKFTVLGGKLPK---GILLVGPPGTGKTLLARA 333 Query: 515 VATEAGANFINISMS 559 VA EA F S S Sbjct: 334 VAGEADVPFYYASGS 348
>YMEL1_MOUSE (O88967) ATP-dependent metalloprotease YME1L1 (EC 3.4.24.-)| (YME1-like protein 1) (ATP-dependent metalloprotease FtsH1) Length = 715 Score = 55.5 bits (132), Expect = 1e-07 Identities = 36/75 (48%), Positives = 47/75 (62%), Gaps = 2/75 (2%) Frame = +2 Query: 341 VTFDDIGALENVKETLKELVMLPLQRPELFCK--GQLTKPCKGILLFGPPGTGKTMLAKA 514 VTF+ + +E K+ L+E+V L+ P+ F G+L K GILL GPPGTGKT+LA+A Sbjct: 278 VTFEHVKGVEEAKQELQEVVEF-LKNPQKFTVLGGKLPK---GILLVGPPGTGKTLLARA 333 Query: 515 VATEAGANFINISMS 559 VA EA F S S Sbjct: 334 VAGEADVPFYYASGS 348
>YMEL1_HUMAN (Q96TA2) ATP-dependent metalloprotease YME1L1 (EC 3.4.24.-)| (YME1-like protein 1) (ATP-dependent metalloprotease FtsH1) (Meg-4) (Presenilin-associated metalloprotease) (PAMP) Length = 773 Score = 55.5 bits (132), Expect = 1e-07 Identities = 36/75 (48%), Positives = 47/75 (62%), Gaps = 2/75 (2%) Frame = +2 Query: 341 VTFDDIGALENVKETLKELVMLPLQRPELFC--KGQLTKPCKGILLFGPPGTGKTMLAKA 514 VTF+ + +E K+ L+E+V L+ P+ F G+L K GILL GPPGTGKT+LA+A Sbjct: 336 VTFEHVKGVEEAKQELQEVVEF-LKNPQKFTILGGKLPK---GILLVGPPGTGKTLLARA 391 Query: 515 VATEAGANFINISMS 559 VA EA F S S Sbjct: 392 VAGEADVPFYYASGS 406
>FTSH_BACPF (P94304) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 679 Score = 55.5 bits (132), Expect = 1e-07 Identities = 34/71 (47%), Positives = 43/71 (60%) Frame = +2 Query: 347 FDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATE 526 F D+ + K+ L E+V L+ P F P KG+LL GPPGTGKT+LA+AVA E Sbjct: 165 FKDVAGADEEKQELVEVVEF-LKDPRKFSAIGARIP-KGVLLVGPPGTGKTLLARAVAGE 222 Query: 527 AGANFINISMS 559 AG F +IS S Sbjct: 223 AGVPFFSISGS 233
>RCA1_YEAST (P40341) Mitochondrial respiratory chain complexes assembly protein| RCA1 (EC 3.4.24.-) (TAT-binding homolog 12) Length = 825 Score = 55.1 bits (131), Expect = 1e-07 Identities = 32/76 (42%), Positives = 43/76 (56%) Frame = +2 Query: 332 DIGVTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAK 511 D+ + F D+ + KE + E V L+ P + K P +G +L GPPGTGKT+LAK Sbjct: 342 DVKIKFKDVAGCDEAKEEIMEFVSF-LKEPSRYEKMGAKIP-RGAILSGPPGTGKTLLAK 399 Query: 512 AVATEAGANFINISMS 559 A A EAG F +S S Sbjct: 400 ATAGEAGVPFYFVSGS 415
>YME1_SCHMA (P46508) Protein YME1 homolog (EC 3.4.24.-)| Length = 662 Score = 55.1 bits (131), Expect = 1e-07 Identities = 34/74 (45%), Positives = 46/74 (62%) Frame = +2 Query: 341 VTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVA 520 V+F D+ + VK+ L ++V L+ PE F + P KG+LL GPPG GKT+LAKAV+ Sbjct: 163 VSFSDVQGCDEVKKELVDVVEF-LRNPEKFNQIGAKLP-KGVLLVGPPGVGKTLLAKAVS 220 Query: 521 TEAGANFINISMSS 562 EA F+ S SS Sbjct: 221 GEAQVPFLYASGSS 234
>FTSH_MYCGE (P47695) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 702 Score = 53.9 bits (128), Expect = 3e-07 Identities = 31/67 (46%), Positives = 42/67 (62%) Frame = +2 Query: 341 VTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVA 520 V F +I L+ K L E+V L+ P + + P +G++L+GPPGTGKT+LAKAVA Sbjct: 228 VKFTNIAGLQEEKHELLEIVDY-LKNPLKYAQMGARSP-RGVILYGPPGTGKTLLAKAVA 285 Query: 521 TEAGANF 541 EAG F Sbjct: 286 GEAGVPF 292
>FTSH_LACLA (P46469) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 695 Score = 53.9 bits (128), Expect = 3e-07 Identities = 35/73 (47%), Positives = 44/73 (60%) Frame = +2 Query: 341 VTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVA 520 V F D+ E K+ L E+V L+ P+ + P G+LL GPPGTGKT+LAKAVA Sbjct: 190 VRFADVAGSEEEKQELVEVVDF-LKNPKKYHDLGARIPA-GVLLEGPPGTGKTLLAKAVA 247 Query: 521 TEAGANFINISMS 559 EAG F +IS S Sbjct: 248 GEAGVPFYSISGS 260
>AF3G2_MOUSE (Q8JZQ2) AFG3-like protein 2 (EC 3.4.24.-)| Length = 802 Score = 53.1 bits (126), Expect = 5e-07 Identities = 33/77 (42%), Positives = 44/77 (57%) Frame = +2 Query: 329 NDIGVTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLA 508 ++I V F D+ E K + E V L+ P+ + + K KG +L GPPGTGKT+LA Sbjct: 300 DEIDVKFKDVAGCEEAKLEIMEFVNF-LKNPKQY-QDLGAKIPKGAILTGPPGTGKTLLA 357 Query: 509 KAVATEAGANFINISMS 559 KA A EA FI +S S Sbjct: 358 KATAGEANVPFITVSGS 374
>AFG3_YEAST (P39925) Mitochondrial respiratory chain complexes assembly protein| AFG3 (EC 3.4.24.-) (TAT-binding homolog 10) Length = 761 Score = 53.1 bits (126), Expect = 5e-07 Identities = 30/76 (39%), Positives = 45/76 (59%) Frame = +2 Query: 332 DIGVTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAK 511 DI ++F ++ + K+ + E V L+ P + K P +G +L GPPGTGKT+LAK Sbjct: 282 DIKISFKNVAGCDEAKQEIMEFVHF-LKNPGKYTKLGAKIP-RGAILSGPPGTGKTLLAK 339 Query: 512 AVATEAGANFINISMS 559 A A EA F+++S S Sbjct: 340 ATAGEANVPFLSVSGS 355
>AFG32_HUMAN (Q9Y4W6) AFG3-like protein 2 (EC 3.4.24.-) (Paraplegin-like| protein) Length = 797 Score = 53.1 bits (126), Expect = 5e-07 Identities = 33/77 (42%), Positives = 44/77 (57%) Frame = +2 Query: 329 NDIGVTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLA 508 ++I V F D+ E K + E V L+ P+ + + K KG +L GPPGTGKT+LA Sbjct: 301 DEIDVKFKDVAGCEEAKLEIMEFVNF-LKNPKQY-QDLGAKIPKGAILTGPPGTGKTLLA 358 Query: 509 KAVATEAGANFINISMS 559 KA A EA FI +S S Sbjct: 359 KATAGEANVPFITVSGS 375
>AFG31_MOUSE (Q920A7) AFG3-like protein 1 (EC 3.4.24.-)| Length = 663 Score = 53.1 bits (126), Expect = 5e-07 Identities = 33/77 (42%), Positives = 44/77 (57%) Frame = +2 Query: 329 NDIGVTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLA 508 N+I V F D+ E K + E V L+ P+ + + K KG +L GPPGTGKT+LA Sbjct: 167 NNIDVRFADVAGCEEAKLEIMEFVNF-LKNPKQY-QDLGAKIPKGAMLTGPPGTGKTLLA 224 Query: 509 KAVATEAGANFINISMS 559 KA A EA FI ++ S Sbjct: 225 KATAGEANVPFITVNGS 241
>FTSH_MYCPU (Q98PE4) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 725 Score = 52.8 bits (125), Expect = 7e-07 Identities = 35/72 (48%), Positives = 42/72 (58%) Frame = +2 Query: 347 FDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATE 526 F DI + E ++ELV L+ P+ + P KGILL GPPGTGKT+LAKA A E Sbjct: 211 FTDIAGNKEPIEEVQELVDY-LKNPKKYAAAGARFP-KGILLGGPPGTGKTLLAKATAGE 268 Query: 527 AGANFINISMSS 562 A F IS SS Sbjct: 269 ANVPFFFISASS 280
>FTSH_TREPA (O83746) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 609 Score = 52.4 bits (124), Expect = 9e-07 Identities = 32/71 (45%), Positives = 44/71 (61%) Frame = +2 Query: 347 FDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATE 526 F D+ ++ KE L E+V L+ P+ + + P +G+LL GPPGTGKT+LA+AVA E Sbjct: 140 FADVAGVDEAKEELMEVVDF-LKFPKKYTEIGGKIP-RGVLLVGPPGTGKTLLARAVAGE 197 Query: 527 AGANFINISMS 559 A F IS S Sbjct: 198 ASVPFFRISGS 208
>YME1_YEAST (P32795) Protein YME1 (EC 3.4.24.-) (TAT-binding homolog 11) (OSD1| protein) Length = 747 Score = 52.0 bits (123), Expect = 1e-06 Identities = 32/73 (43%), Positives = 45/73 (61%) Frame = +2 Query: 341 VTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVA 520 V FDD+ + + L+E+V L+ P + + K KG+LL GPPGTGKT+LA+A A Sbjct: 278 VKFDDVCGCDEARAELEEIVDF-LKDPTKY-ESLGGKLPKGVLLTGPPGTGKTLLARATA 335 Query: 521 TEAGANFINISMS 559 EAG +F +S S Sbjct: 336 GEAGVDFFFMSGS 348
>PRS2_METJA (Q58889) Putative 26S protease regulatory subunit homolog MJ1494| Length = 371 Score = 49.7 bits (117), Expect = 6e-06 Identities = 30/90 (33%), Positives = 51/90 (56%) Frame = +2 Query: 275 VATENEFEKRLLADVIPPNDIGVTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKP 454 + +E F+ + V+ F +I E K+ + ++M L+ P+LF G+ Sbjct: 99 ITSETVFKLQTPKKVLRTQFKKAKFSEIIGQEEAKKKCR-IIMKYLENPKLF--GEWAP- 154 Query: 455 CKGILLFGPPGTGKTMLAKAVATEAGANFI 544 K +L +GPPGTGKT++A+A+ATE ++FI Sbjct: 155 -KNVLFYGPPGTGKTLMARALATETNSSFI 183
>YCF2_MESVI (Q9MUP8) Protein ycf2 (RF2)| Length = 890 Score = 47.4 bits (111), Expect = 3e-05 Identities = 27/73 (36%), Positives = 40/73 (54%) Frame = +2 Query: 341 VTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVA 520 +TF DIG +E++K+ L + L Q K G L GPPGTGKT++AKA++ Sbjct: 346 ITFRDIGGMESLKQELATVAFLLKQ------KNYSNSYPMGYLFAGPPGTGKTLMAKAMS 399 Query: 521 TEAGANFINISMS 559 EA ++ + S Sbjct: 400 YEAETPYLYVEGS 412
>RFCL_METJA (Q58294) Replication factor C large subunit (RFC large subunit)| (Clamp loader large subunit) Length = 516 Score = 46.2 bits (108), Expect = 6e-05 Identities = 29/69 (42%), Positives = 37/69 (53%) Frame = +2 Query: 353 DIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEAG 532 D+ E VKE LK + E + KG+ KP ILL GPPG GKT LA A+A + G Sbjct: 15 DVAGHEKVKEKLKTWI-------ESYLKGETPKP---ILLVGPPGCGKTTLAYALANDYG 64 Query: 533 ANFINISMS 559 I ++ S Sbjct: 65 FEVIELNAS 73
>LON1_BACSU (P37945) ATP-dependent protease La 1 (EC 3.4.21.53)| Length = 774 Score = 45.4 bits (106), Expect = 1e-04 Identities = 27/69 (39%), Positives = 37/69 (53%), Gaps = 2/69 (2%) Frame = +2 Query: 365 LENVKETLKELVMLPLQRPELFCKGQLTKPCKG--ILLFGPPGTGKTMLAKAVATEAGAN 538 LE VKE + E + + +LTK KG + L GPPG GKT LAK++A G Sbjct: 325 LEKVKERILEYLAVQ----------KLTKSLKGPILCLAGPPGVGKTSLAKSIAKSLGRK 374 Query: 539 FINISMSSI 565 F+ IS+ + Sbjct: 375 FVRISLGGV 383
>FTSH_CHLVU (P56369) Cell division protein ftsH homolog| Length = 1720 Score = 44.7 bits (104), Expect = 2e-04 Identities = 31/73 (42%), Positives = 41/73 (56%) Frame = +2 Query: 347 FDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATE 526 F DI ++ V L E+V+ F + T P GILL GPPGTGKT+L +A+A E Sbjct: 973 FTDIVGIQKVLLELYEIVLFLRNSGRNFTHSE-TLP-HGILLTGPPGTGKTLLVQALAGE 1030 Query: 527 AGANFINISMSSI 565 A I +S SS+ Sbjct: 1031 AQVPVIVLSGSSL 1043
>YME1_CAEEL (P54813) Protein YME1 homolog (EC 3.4.24.-)| Length = 676 Score = 44.7 bits (104), Expect = 2e-04 Identities = 28/67 (41%), Positives = 43/67 (64%), Gaps = 2/67 (2%) Frame = +2 Query: 365 LENVKETLKELVMLPLQRPELFCK--GQLTKPCKGILLFGPPGTGKTMLAKAVATEAGAN 538 ++ K ++E+V L+ PE + + G+L K G+LL GPPGTGKT+LA+A+A EA Sbjct: 206 MDEAKLEVEEIVDY-LKDPEKYSRLGGRLPK---GVLLVGPPGTGKTLLARAIAGEAQVP 261 Query: 539 FINISMS 559 F + + S Sbjct: 262 FFHTAGS 268
>RFCL_PYRAE (Q8ZYK3) Replication factor C large subunit (RFC large subunit)| (Clamp loader large subunit) Length = 422 Score = 44.3 bits (103), Expect = 2e-04 Identities = 28/80 (35%), Positives = 37/80 (46%), Gaps = 6/80 (7%) Frame = +2 Query: 344 TFDDIGALENVKETLKELVMLPLQRPELFCKGQLTK------PCKGILLFGPPGTGKTML 505 +F +I E K TL + L + P+ FC K K ILL GPPG GKT L Sbjct: 13 SFAEIVNQEEAKYTLASWICLKFRAPKEFCTRWAKKRDKEVAEAKAILLAGPPGVGKTTL 72 Query: 506 AKAVATEAGANFINISMSSI 565 A+A E I ++ S + Sbjct: 73 VHALAREIRYELIELNASDV 92
>LON_CAUCR (P52977) ATP-dependent protease La (EC 3.4.21.53)| Length = 799 Score = 41.6 bits (96), Expect = 0.002 Identities = 25/76 (32%), Positives = 38/76 (50%) Frame = +2 Query: 338 GVTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAV 517 G+ D LE VKE + E + + + L KG + + L GPPG GKT L K++ Sbjct: 314 GILDADHYGLEKVKERILEYLAVQARTNSL--KGPI------LCLVGPPGVGKTSLGKSI 365 Query: 518 ATEAGANFINISMSSI 565 A G F+ +S+ + Sbjct: 366 AKATGREFVRMSLGGV 381
>SEC18_CANAL (P34732) Vesicular-fusion protein SEC18| Length = 794 Score = 40.8 bits (94), Expect = 0.003 Identities = 15/24 (62%), Positives = 22/24 (91%) Frame = +2 Query: 449 KPCKGILLFGPPGTGKTMLAKAVA 520 K CKG+LL+GPPGTGKT++A+ ++ Sbjct: 308 KHCKGLLLYGPPGTGKTLIARKLS 331 Score = 34.3 bits (77), Expect = 0.25 Identities = 15/35 (42%), Positives = 22/35 (62%) Frame = +2 Query: 446 TKPCKGILLFGPPGTGKTMLAKAVATEAGANFINI 550 T+ + ILL+GPPG GKT +A +A + FI + Sbjct: 590 TEHLRSILLYGPPGVGKTSIATTLALNSDFPFIKM 624
>RUVB_NITEU (Q82XP4) Holliday junction ATP-dependent DNA helicase ruvB (EC| 3.6.1.-) Length = 346 Score = 40.8 bits (94), Expect = 0.003 Identities = 25/66 (37%), Positives = 30/66 (45%) Frame = +2 Query: 341 VTFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVA 520 V DD E ++E LK + R E +LLFGPPG GKT LA +A Sbjct: 27 VQLDDYVGQEKIREQLKIFIEAARLRQEAL---------DHVLLFGPPGLGKTTLAHIIA 77 Query: 521 TEAGAN 538 E G N Sbjct: 78 REMGVN 83
>RUVB_CAUCR (Q9A3G8) Holliday junction ATP-dependent DNA helicase ruvB (EC| 3.6.1.-) Length = 346 Score = 40.8 bits (94), Expect = 0.003 Identities = 18/26 (69%), Positives = 20/26 (76%) Frame = +2 Query: 464 ILLFGPPGTGKTMLAKAVATEAGANF 541 +LLFGPPG GKT LA+ VA E G NF Sbjct: 56 VLLFGPPGLGKTTLAQIVARELGVNF 81
>RUVB_FUSNN (Q8RE97) Holliday junction ATP-dependent DNA helicase ruvB (EC| 3.6.1.-) Length = 332 Score = 40.8 bits (94), Expect = 0.003 Identities = 27/87 (31%), Positives = 44/87 (50%), Gaps = 7/87 (8%) Frame = +2 Query: 299 KRLLADVIPPNDIGV-------TFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPC 457 +R+++++ PN+I + +FD+ EN+KE + + +R + Sbjct: 2 ERIISELEMPNEIEIQKSLRPKSFDEYIGQENLKEKMSISIKAAQKRNMVV--------- 52 Query: 458 KGILLFGPPGTGKTMLAKAVATEAGAN 538 ILL+GPPG GKT LA +A E AN Sbjct: 53 DHILLYGPPGLGKTTLAGVIANEMKAN 79
>LON_AZOBR (P77810) ATP-dependent protease La (EC 3.4.21.53)| Length = 810 Score = 40.8 bits (94), Expect = 0.003 Identities = 23/67 (34%), Positives = 36/67 (53%) Frame = +2 Query: 365 LENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEAGANFI 544 LE VKE + E + + + ++ KG + L GPPG GKT L K++A G NF+ Sbjct: 332 LEKVKERILEYLRVQNRMNKV--KGPIQS------LVGPPGVGKTSLGKSIAKSTGRNFV 383 Query: 545 NISMSSI 565 +S+ + Sbjct: 384 RMSLGGV 390
>NSF2_DROME (P54351) Vesicular-fusion protein Nsf2 (N-ethylmaleimide-sensitive| fusion protein 2) (NEM-sensitive fusion protein 2) (dNsf-2) Length = 752 Score = 40.4 bits (93), Expect = 0.004 Identities = 17/29 (58%), Positives = 22/29 (75%) Frame = +2 Query: 449 KPCKGILLFGPPGTGKTMLAKAVATEAGA 535 K KGILL+GPPGTGKT++A+ + T A Sbjct: 256 KHVKGILLYGPPGTGKTLMARQIGTMLNA 284
>RUVB_THETH (Q56214) Holliday junction ATP-dependent DNA helicase ruvB (EC| 3.6.1.-) Length = 324 Score = 40.4 bits (93), Expect = 0.004 Identities = 24/65 (36%), Positives = 32/65 (49%) Frame = +2 Query: 344 TFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVAT 523 T D+ E +K+ L+ + R E P + +LLFGPPG GKT LA +A Sbjct: 10 TLDEYIGQERLKQKLRVYLEAAKARKE---------PLEHLLLFGPPGLGKTTLAHVIAH 60 Query: 524 EAGAN 538 E G N Sbjct: 61 ELGVN 65
>RUVB_THET8 (Q5SL87) Holliday junction ATP-dependent DNA helicase ruvB (EC| 3.6.1.-) Length = 324 Score = 40.4 bits (93), Expect = 0.004 Identities = 24/65 (36%), Positives = 32/65 (49%) Frame = +2 Query: 344 TFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVAT 523 T D+ E +K+ L+ + R E P + +LLFGPPG GKT LA +A Sbjct: 10 TLDEYIGQERLKQKLRVYLEAAKARKE---------PLEHLLLFGPPGLGKTTLAHVIAH 60 Query: 524 EAGAN 538 E G N Sbjct: 61 ELGVN 65
>LON1_MYXXA (P36773) ATP-dependent protease La 1 (EC 3.4.21.53)| Length = 817 Score = 40.4 bits (93), Expect = 0.004 Identities = 19/44 (43%), Positives = 27/44 (61%), Gaps = 2/44 (4%) Frame = +2 Query: 440 QLTKPCKGILL--FGPPGTGKTMLAKAVATEAGANFINISMSSI 565 QL K KG +L GPPG GKT LA+++A G F+ +S+ + Sbjct: 354 QLVKKLKGPVLCFVGPPGVGKTSLARSIARATGRKFVRLSLGGV 397
>RUVB_THET2 (P61537) Holliday junction ATP-dependent DNA helicase ruvB (EC| 3.6.1.-) Length = 336 Score = 40.4 bits (93), Expect = 0.004 Identities = 24/65 (36%), Positives = 32/65 (49%) Frame = +2 Query: 344 TFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVAT 523 T D+ E +K+ L+ + R E P + +LLFGPPG GKT LA +A Sbjct: 22 TLDEYIGQERLKQKLRVYLEAAKARKE---------PLEHLLLFGPPGLGKTTLAHVIAH 72 Query: 524 EAGAN 538 E G N Sbjct: 73 ELGVN 77
>NSF1_DROME (P46461) Vesicular-fusion protein Nsf1 (N-ethylmaleimide-sensitive| fusion protein 1) (NEM-sensitive fusion protein 1) (dNsf-1) (Protein comatose) Length = 745 Score = 40.4 bits (93), Expect = 0.004 Identities = 17/29 (58%), Positives = 22/29 (75%) Frame = +2 Query: 449 KPCKGILLFGPPGTGKTMLAKAVATEAGA 535 K KGILL+GPPGTGKT++A+ + T A Sbjct: 251 KHVKGILLYGPPGTGKTLMARQIGTMLNA 279
>RUVB_BDEBA (P61529) Holliday junction ATP-dependent DNA helicase ruvB (EC| 3.6.1.-) Length = 329 Score = 40.0 bits (92), Expect = 0.005 Identities = 26/73 (35%), Positives = 34/73 (46%) Frame = +2 Query: 347 FDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATE 526 F+D ++VKE LK V R E +LL GPPG GKT L+K +A + Sbjct: 25 FEDFPGQDDVKEKLKVFVAAAKHRGESL---------DHVLLCGPPGLGKTTLSKIIAND 75 Query: 527 AGANFINISMSSI 565 GA S +I Sbjct: 76 MGAEIKMTSAPAI 88
>RFCL_METKA (Q8TZC5) Replication factor C large subunit (RFC large subunit)| (Clamp loader large subunit) Length = 510 Score = 40.0 bits (92), Expect = 0.005 Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 6/65 (9%) Frame = +2 Query: 383 TLKELVMLPLQRPEL------FCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEAGANFI 544 +LKELV + EL + +G + +P + +LL GPPGTGKT A A+A + G + I Sbjct: 12 SLKELVNQDEAKKELAAWANEWARGSIPEP-RAVLLHGPPGTGKTSAAYALAHDFGWDVI 70 Query: 545 NISMS 559 ++ S Sbjct: 71 ELNAS 75
>RUVB_BURS3 (Q39JJ1) Holliday junction ATP-dependent DNA helicase ruvB (EC| 3.6.1.-) Length = 356 Score = 39.7 bits (91), Expect = 0.006 Identities = 24/63 (38%), Positives = 30/63 (47%) Frame = +2 Query: 350 DDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEA 529 DD E V+ L+ + +R E P +LLFGPPG GKT LA +A E Sbjct: 36 DDYVGQEKVRGQLEIFIEAAKRRSE---------PLDHVLLFGPPGLGKTTLAHIIAREM 86 Query: 530 GAN 538 G N Sbjct: 87 GVN 89
>RUVB_BURCE (Q93LP2) Holliday junction ATP-dependent DNA helicase ruvB (EC| 3.6.1.-) Length = 355 Score = 39.7 bits (91), Expect = 0.006 Identities = 24/63 (38%), Positives = 30/63 (47%) Frame = +2 Query: 350 DDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEA 529 DD E V+ L+ + +R E P +LLFGPPG GKT LA +A E Sbjct: 35 DDYVGQEKVRGQLEIFIEAAKRRSE---------PLDHVLLFGPPGLGKTTLAHIIAREM 85 Query: 530 GAN 538 G N Sbjct: 86 GVN 88
>LON_BUCAI (P57549) ATP-dependent protease La (EC 3.4.21.53)| Length = 777 Score = 39.7 bits (91), Expect = 0.006 Identities = 21/67 (31%), Positives = 37/67 (55%) Frame = +2 Query: 365 LENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEAGANFI 544 LE VK+ + E + + ++ ++ KG + + L GPPG GKT L K++A G ++ Sbjct: 327 LETVKDRILEYLAVQSRKNKI--KGPI------LCLIGPPGVGKTSLGKSIARSTGRKYV 378 Query: 545 NISMSSI 565 I++ I Sbjct: 379 RIALGGI 385
>RUVB_SALRD (Q2S3F9) Holliday junction ATP-dependent DNA helicase ruvB (EC| 3.6.1.-) Length = 344 Score = 39.7 bits (91), Expect = 0.006 Identities = 24/64 (37%), Positives = 30/64 (46%) Frame = +2 Query: 344 TFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVAT 523 + D+ E +KE L + LQR E +LL GPPG GKT LA +A Sbjct: 28 SLDEFVGQEKIKENLNVFMKAALQRGETL---------DHVLLSGPPGLGKTTLAHIIAN 78 Query: 524 EAGA 535 E GA Sbjct: 79 EMGA 82
>RUVB_STRMU (Q8DWI4) Holliday junction ATP-dependent DNA helicase ruvB (EC| 3.6.1.-) Length = 344 Score = 39.3 bits (90), Expect = 0.008 Identities = 24/66 (36%), Positives = 31/66 (46%) Frame = +2 Query: 368 ENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEAGANFIN 547 + VK+ LK + QR E +LLFGPPG GKT +A +A E G N Sbjct: 45 DKVKDQLKIFIKAAKQRDEAL---------DHVLLFGPPGLGKTTMAFVIANELGVNLKQ 95 Query: 548 ISMSSI 565 S +I Sbjct: 96 TSGPAI 101
>RUVB_SHISS (Q3Z2L8) Holliday junction ATP-dependent DNA helicase ruvB (EC| 3.6.1.-) Length = 336 Score = 39.3 bits (90), Expect = 0.008 Identities = 28/72 (38%), Positives = 37/72 (51%), Gaps = 5/72 (6%) Frame = +2 Query: 338 GVTFDDIGALENVK-ETLKELVMLPLQRP--ELFCKGQLTK--PCKGILLFGPPGTGKTM 502 G T + GA ++ + L+E V P R E+F K + +L+FGPPG GKT Sbjct: 11 GTTLPEDGADRAIRPKLLEEYVGQPQVRSQMEIFIKAAKLRGDALDHLLIFGPPGLGKTT 70 Query: 503 LAKAVATEAGAN 538 LA VA E G N Sbjct: 71 LANIVANEMGVN 82
>LON_TREPA (O83536) ATP-dependent protease La (EC 3.4.21.53)| Length = 881 Score = 39.3 bits (90), Expect = 0.008 Identities = 26/72 (36%), Positives = 36/72 (50%) Frame = +2 Query: 350 DDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEA 529 +D LENVKE + E + + R + KG + ILL GPPG GKT + K++A Sbjct: 406 EDHYGLENVKERIVEYLAVRKLRADT--KGSI------ILLVGPPGVGKTSVGKSIARAI 457 Query: 530 GANFINISMSSI 565 F S+ I Sbjct: 458 HKPFFRFSVGGI 469
>RUVB_SYMTH (Q67Q97) Holliday junction ATP-dependent DNA helicase ruvB (EC| 3.6.1.-) Length = 347 Score = 39.3 bits (90), Expect = 0.008 Identities = 24/62 (38%), Positives = 29/62 (46%) Frame = +2 Query: 353 DIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEAG 532 D E VKE L + +R E P +LL+GPPG GKT LA +A E G Sbjct: 29 DYPGQERVKEQLSIYIAAAKKRGE---------PLDHVLLYGPPGLGKTTLAHIIAHEMG 79 Query: 533 AN 538 N Sbjct: 80 VN 81
>RFCL_NANEQ (P60373) Replication factor C large subunit (RFC large subunit)| (Clamp loader large subunit) Length = 430 Score = 39.3 bits (90), Expect = 0.008 Identities = 24/72 (33%), Positives = 38/72 (52%) Frame = +2 Query: 344 TFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVAT 523 T D++ E K+ L++ V+ ++ KG K +LL+GPPGTGKT A+A Sbjct: 41 TLDEVENQEQAKQILRDYVINYKKK----YKG------KALLLYGPPGTGKTSSVYALAN 90 Query: 524 EAGANFINISMS 559 E G + ++ S Sbjct: 91 ELGYEVLEVNAS 102
>RUVB_NEIMB (Q9JZ86) Holliday junction ATP-dependent DNA helicase ruvB (EC| 3.6.1.-) Length = 343 Score = 39.3 bits (90), Expect = 0.008 Identities = 24/65 (36%), Positives = 29/65 (44%) Frame = +2 Query: 344 TFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVAT 523 T DD + KE L + +R E +LLFGPPG GKT LA +A Sbjct: 36 TLDDYIGQDKAKEQLAIFIQAAKKRGEAL---------DHVLLFGPPGLGKTTLAHIIAK 86 Query: 524 EAGAN 538 E G N Sbjct: 87 ELGVN 91
>RUVB_NOVAD (Q2GBA2) Holliday junction ATP-dependent DNA helicase ruvB (EC| 3.6.1.-) Length = 342 Score = 38.9 bits (89), Expect = 0.010 Identities = 16/26 (61%), Positives = 19/26 (73%) Frame = +2 Query: 464 ILLFGPPGTGKTMLAKAVATEAGANF 541 +L FGPPG GKT LA+ +A E G NF Sbjct: 55 VLFFGPPGLGKTTLAQIIARELGVNF 80
>RUVB_BACLD (Q65GP6) Holliday junction DNA helicase ruvB| Length = 334 Score = 38.9 bits (89), Expect = 0.010 Identities = 24/66 (36%), Positives = 30/66 (45%) Frame = +2 Query: 368 ENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEAGANFIN 547 E VK+ LK + R E +LL+GPPG GKT LA +A E G N Sbjct: 33 EKVKDNLKVFIEAAKMREETL---------DHVLLYGPPGLGKTTLAAIIANEMGVNLRT 83 Query: 548 ISMSSI 565 S +I Sbjct: 84 TSGPAI 89
>RFCL_SULAC (Q4JAB1) Replication factor C large subunit (RFC large subunit)| (Clamp loader large subunit) Length = 437 Score = 38.9 bits (89), Expect = 0.010 Identities = 23/64 (35%), Positives = 36/64 (56%) Frame = +2 Query: 368 ENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEAGANFIN 547 + VKE LK+ + E + G+ T K +LL+GPPG GKT LA+A+A + + Sbjct: 21 DEVKEELKKWI-------ESWLNGEPT--AKAVLLYGPPGVGKTTLAEALARDYKLELLE 71 Query: 548 ISMS 559 ++ S Sbjct: 72 MNAS 75
>LON_RHIME (O69177) ATP-dependent protease La (EC 3.4.21.53)| Length = 806 Score = 38.9 bits (89), Expect = 0.010 Identities = 21/67 (31%), Positives = 37/67 (55%) Frame = +2 Query: 365 LENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEAGANFI 544 L+ VKE + E + + + ++ KG + + L GPPG GKT LAK++A G +I Sbjct: 330 LDKVKERIVEYLAVQARSSKI--KGPI------LCLVGPPGVGKTSLAKSIAKATGREYI 381 Query: 545 NISMSSI 565 +++ + Sbjct: 382 RMALGGV 388
>SEC18_YEAST (P18759) Vesicular-fusion protein SEC18| Length = 758 Score = 38.9 bits (89), Expect = 0.010 Identities = 15/26 (57%), Positives = 21/26 (80%) Frame = +2 Query: 458 KGILLFGPPGTGKTMLAKAVATEAGA 535 KG+LL+GPPGTGKT++A+ + T A Sbjct: 275 KGLLLYGPPGTGKTLIARKIGTMLNA 300 Score = 31.2 bits (69), Expect = 2.1 Identities = 13/29 (44%), Positives = 20/29 (68%) Frame = +2 Query: 464 ILLFGPPGTGKTMLAKAVATEAGANFINI 550 +L+ GP G+GKT LA +A ++G FI + Sbjct: 560 LLIHGPAGSGKTALAAEIALKSGFPFIRL 588
>RUVB_COLP3 (Q483C4) Holliday junction ATP-dependent DNA helicase ruvB (EC| 3.6.1.-) Length = 337 Score = 38.9 bits (89), Expect = 0.010 Identities = 17/30 (56%), Positives = 20/30 (66%) Frame = +2 Query: 449 KPCKGILLFGPPGTGKTMLAKAVATEAGAN 538 +P +L+FGPPG GKT LA VA E G N Sbjct: 53 EPLDHLLIFGPPGLGKTTLANIVANEMGVN 82
>Y3868_MYCTU (O69733) Hypothetical protein Rv3868/MT3981| Length = 573 Score = 38.9 bits (89), Expect = 0.010 Identities = 27/83 (32%), Positives = 40/83 (48%), Gaps = 1/83 (1%) Frame = +2 Query: 275 VATENEFEKRLLADVIPPNDIGVTFDDIGALENVKETLKELVMLPLQRPELFCKG-QLTK 451 V T+N +RLLA+ D + L VK ++ L KG ++ + Sbjct: 272 VVTDNSGRERLLAEAQAELDRQI------GLTRVKNQIERYRAATLMARVRAAKGMKVAQ 325 Query: 452 PCKGILLFGPPGTGKTMLAKAVA 520 P K ++ GPPGTGKT +A+ VA Sbjct: 326 PSKHMIFTGPPGTGKTTIARVVA 348
>LONH_MIMIV (Q5UPT0) Lon protease homolog (EC 3.4.21.-)| Length = 1023 Score = 38.5 bits (88), Expect = 0.013 Identities = 25/55 (45%), Positives = 31/55 (56%) Frame = +2 Query: 368 ENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEAG 532 EN K+ L ELV +Q PE GQ+ I L GPPG GKT+LAK ++ G Sbjct: 487 ENSKKVLIELVGKWIQNPE--SSGQV------IGLVGPPGVGKTLLAKGISAALG 533
>LON_BRECH (P36772) ATP-dependent protease La (EC 3.4.21.53)| Length = 779 Score = 38.5 bits (88), Expect = 0.013 Identities = 16/34 (47%), Positives = 22/34 (64%) Frame = +2 Query: 464 ILLFGPPGTGKTMLAKAVATEAGANFINISMSSI 565 + L GPPG GKT LA++VA G F+ IS+ + Sbjct: 351 LCLVGPPGVGKTSLARSVARALGREFVRISLGGV 384
>RUVB_STAHJ (Q4L6Y6) Holliday junction ATP-dependent DNA helicase ruvB (EC| 3.6.1.-) Length = 331 Score = 38.5 bits (88), Expect = 0.013 Identities = 17/39 (43%), Positives = 23/39 (58%) Frame = +2 Query: 449 KPCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSI 565 +P +LLFGPPG GKT L+ +A E N +S S+ Sbjct: 51 EPLDHVLLFGPPGLGKTTLSNIIANEMNVNIRTVSGPSL 89
>RUVB_NEIMA (Q9JUB0) Holliday junction ATP-dependent DNA helicase ruvB (EC| 3.6.1.-) Length = 343 Score = 38.5 bits (88), Expect = 0.013 Identities = 24/65 (36%), Positives = 28/65 (43%) Frame = +2 Query: 344 TFDDIGALENVKETLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVAT 523 T DD KE L + +R E +LLFGPPG GKT LA +A Sbjct: 36 TLDDYIGQHKAKEQLAIFIQAAKKRGEAL---------DHVLLFGPPGLGKTTLAHIIAK 86 Query: 524 EAGAN 538 E G N Sbjct: 87 ELGVN 91 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 74,055,000 Number of Sequences: 219361 Number of extensions: 1482565 Number of successful extensions: 8410 Number of sequences better than 10.0: 500 Number of HSP's better than 10.0 without gapping: 7788 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 8238 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4700377760 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
