| Clone Name | bags18f07 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC146592.1| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0010P23 PCR product, complete sequence Length = 19234 Score = 234 bits (118), Expect = 3e-58 Identities = 166/182 (91%) Strand = Plus / Minus Query: 270 aggatgttgccacagagaacgaatttgagaaaaggcttttggcagatgttataccaccga 329 ||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||| | Sbjct: 17479 aggatgttgtcacagagaacgaatttgagaaaaggcttctggcagatgttataccaccta 17420 Query: 330 atgatatcggagtcacctttgatgatattggtgcgttggagaatgtaaaggaaacattga 389 |||| || ||||||||||||||||||||||| || ||||| |||||||| || ||||||| Sbjct: 17419 atgacattggagtcacctttgatgatattggagccttggaaaatgtaaaagacacattga 17360 Query: 390 aggagttggtgatgctcccactgcaaaggccggaattgttctgcaaagggcagttaacga 449 ||||| |||||||||| || ||||||||||| ||||||||||||||||| ||| |||||| Sbjct: 17359 aggagctggtgatgcttcctctgcaaaggcctgaattgttctgcaaaggacagctaacga 17300 Query: 450 ag 451 || Sbjct: 17299 ag 17298 Score = 176 bits (89), Expect = 5e-41 Identities = 110/117 (94%) Strand = Plus / Minus Query: 450 agccttgcaagggaatattgctctttggacctcctggcactgggaaaactatgcttgcta 509 |||||||||||||||||||||| |||||||||||||| ||||||||||| |||||||||| Sbjct: 16833 agccttgcaagggaatattgctgtttggacctcctggtactgggaaaaccatgcttgcta 16774 Query: 510 aagcagtagcaactgaagcaggcgctaacttcatcaatatatcaatgtcaagcatta 566 | |||||||||||||||||||| ||||||||||| || ||||||||||||||||||| Sbjct: 16773 aggcagtagcaactgaagcaggtgctaacttcattaacatatcaatgtcaagcatta 16717 Score = 87.7 bits (44), Expect = 4e-14 Identities = 71/80 (88%) Strand = Plus / Minus Query: 105 atgtggacaagattgttgggtacgctgtcagttatcatcttaagcacaataaagttgaaa 164 ||||||||||||| ||||| || ||||| |||||||| ||||||||||||||||| || | Sbjct: 17826 atgtggacaagatagttggctatgctgttagttatcaccttaagcacaataaagtcgaga 17767 Query: 165 cctccaaggacggtaaactt 184 ||||||||| ||||||||| Sbjct: 17766 tctccaaggatggtaaactt 17747 Score = 58.0 bits (29), Expect = 3e-05 Identities = 59/69 (85%) Strand = Plus / Minus Query: 28 gtttctgagtcgcagtgcgatcgaatgcaatgaccttgaagaattgttcattaaggatca 87 ||||||||| |||| || || ||||||| ||||||||||||||| ||||| || ||||| Sbjct: 17981 gtttctgagccgcaatggaattgaatgcagtgaccttgaagaattattcatcaaagatca 17922 Query: 88 gtcactgac 96 |||||||| Sbjct: 17921 atcactgac 17913 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Minus Query: 200 agccttaagcatggcctcgacatgctacagagcatccatagtgataacaagagctc 255 |||||||||||||| ||| ||||||| |||| || || ||||||||||||||||| Sbjct: 17645 agccttaagcatgggctcaacatgctgcagaatatgcaaagtgataacaagagctc 17590
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 234 bits (118), Expect = 3e-58 Identities = 166/182 (91%) Strand = Plus / Minus Query: 270 aggatgttgccacagagaacgaatttgagaaaaggcttttggcagatgttataccaccga 329 ||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||| | Sbjct: 25687269 aggatgttgtcacagagaacgaatttgagaaaaggcttctggcagatgttataccaccta 25687210 Query: 330 atgatatcggagtcacctttgatgatattggtgcgttggagaatgtaaaggaaacattga 389 |||| || ||||||||||||||||||||||| || ||||| |||||||| || ||||||| Sbjct: 25687209 atgacattggagtcacctttgatgatattggagccttggaaaatgtaaaagacacattga 25687150 Query: 390 aggagttggtgatgctcccactgcaaaggccggaattgttctgcaaagggcagttaacga 449 ||||| |||||||||| || ||||||||||| ||||||||||||||||| ||| |||||| Sbjct: 25687149 aggagctggtgatgcttcctctgcaaaggcctgaattgttctgcaaaggacagctaacga 25687090 Query: 450 ag 451 || Sbjct: 25687089 ag 25687088 Score = 176 bits (89), Expect = 5e-41 Identities = 110/117 (94%) Strand = Plus / Minus Query: 450 agccttgcaagggaatattgctctttggacctcctggcactgggaaaactatgcttgcta 509 |||||||||||||||||||||| |||||||||||||| ||||||||||| |||||||||| Sbjct: 25686623 agccttgcaagggaatattgctgtttggacctcctggtactgggaaaaccatgcttgcta 25686564 Query: 510 aagcagtagcaactgaagcaggcgctaacttcatcaatatatcaatgtcaagcatta 566 | |||||||||||||||||||| ||||||||||| || ||||||||||||||||||| Sbjct: 25686563 aggcagtagcaactgaagcaggtgctaacttcattaacatatcaatgtcaagcatta 25686507 Score = 87.7 bits (44), Expect = 4e-14 Identities = 71/80 (88%) Strand = Plus / Minus Query: 105 atgtggacaagattgttgggtacgctgtcagttatcatcttaagcacaataaagttgaaa 164 ||||||||||||| ||||| || ||||| |||||||| ||||||||||||||||| || | Sbjct: 25687616 atgtggacaagatagttggctatgctgttagttatcaccttaagcacaataaagtcgaga 25687557 Query: 165 cctccaaggacggtaaactt 184 ||||||||| ||||||||| Sbjct: 25687556 tctccaaggatggtaaactt 25687537 Score = 58.0 bits (29), Expect = 3e-05 Identities = 59/69 (85%) Strand = Plus / Minus Query: 28 gtttctgagtcgcagtgcgatcgaatgcaatgaccttgaagaattgttcattaaggatca 87 ||||||||| |||| || || ||||||| ||||||||||||||| ||||| || ||||| Sbjct: 25687771 gtttctgagccgcaatggaattgaatgcagtgaccttgaagaattattcatcaaagatca 25687712 Query: 88 gtcactgac 96 |||||||| Sbjct: 25687711 atcactgac 25687703 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Minus Query: 200 agccttaagcatggcctcgacatgctacagagcatccatagtgataacaagagctc 255 |||||||||||||| ||| ||||||| |||| || || ||||||||||||||||| Sbjct: 25687435 agccttaagcatgggctcaacatgctgcagaatatgcaaagtgataacaagagctc 25687380
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 234 bits (118), Expect = 3e-58 Identities = 166/182 (91%) Strand = Plus / Minus Query: 270 aggatgttgccacagagaacgaatttgagaaaaggcttttggcagatgttataccaccga 329 ||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||| | Sbjct: 26005939 aggatgttgtcacagagaacgaatttgagaaaaggcttctggcagatgttataccaccta 26005880 Query: 330 atgatatcggagtcacctttgatgatattggtgcgttggagaatgtaaaggaaacattga 389 |||| || ||||||||||||||||||||||| || ||||| |||||||| || ||||||| Sbjct: 26005879 atgacattggagtcacctttgatgatattggagccttggaaaatgtaaaagacacattga 26005820 Query: 390 aggagttggtgatgctcccactgcaaaggccggaattgttctgcaaagggcagttaacga 449 ||||| |||||||||| || ||||||||||| ||||||||||||||||| ||| |||||| Sbjct: 26005819 aggagctggtgatgcttcctctgcaaaggcctgaattgttctgcaaaggacagctaacga 26005760 Query: 450 ag 451 || Sbjct: 26005759 ag 26005758 Score = 176 bits (89), Expect = 5e-41 Identities = 110/117 (94%) Strand = Plus / Minus Query: 450 agccttgcaagggaatattgctctttggacctcctggcactgggaaaactatgcttgcta 509 |||||||||||||||||||||| |||||||||||||| ||||||||||| |||||||||| Sbjct: 26005293 agccttgcaagggaatattgctgtttggacctcctggtactgggaaaaccatgcttgcta 26005234 Query: 510 aagcagtagcaactgaagcaggcgctaacttcatcaatatatcaatgtcaagcatta 566 | |||||||||||||||||||| ||||||||||| || ||||||||||||||||||| Sbjct: 26005233 aggcagtagcaactgaagcaggtgctaacttcattaacatatcaatgtcaagcatta 26005177 Score = 87.7 bits (44), Expect = 4e-14 Identities = 71/80 (88%) Strand = Plus / Minus Query: 105 atgtggacaagattgttgggtacgctgtcagttatcatcttaagcacaataaagttgaaa 164 ||||||||||||| ||||| || ||||| |||||||| ||||||||||||||||| || | Sbjct: 26006286 atgtggacaagatagttggctatgctgttagttatcaccttaagcacaataaagtcgaga 26006227 Query: 165 cctccaaggacggtaaactt 184 ||||||||| ||||||||| Sbjct: 26006226 tctccaaggatggtaaactt 26006207 Score = 58.0 bits (29), Expect = 3e-05 Identities = 59/69 (85%) Strand = Plus / Minus Query: 28 gtttctgagtcgcagtgcgatcgaatgcaatgaccttgaagaattgttcattaaggatca 87 ||||||||| |||| || || ||||||| ||||||||||||||| ||||| || ||||| Sbjct: 26006441 gtttctgagccgcaatggaattgaatgcagtgaccttgaagaattattcatcaaagatca 26006382 Query: 88 gtcactgac 96 |||||||| Sbjct: 26006381 atcactgac 26006373 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Minus Query: 200 agccttaagcatggcctcgacatgctacagagcatccatagtgataacaagagctc 255 |||||||||||||| ||| ||||||| |||| || || ||||||||||||||||| Sbjct: 26006105 agccttaagcatgggctcaacatgctgcagaatatgcaaagtgataacaagagctc 26006050
>ref|NM_116481.2| Arabidopsis thaliana ATP binding / ATPase/ nucleoside-triphosphatase/ nucleotide binding AT4G02480 mRNA, complete cds Length = 4287 Score = 147 bits (74), Expect = 5e-32 Identities = 242/298 (81%) Strand = Plus / Plus Query: 269 aaggatgttgccacagagaacgaatttgagaaaaggcttttggcagatgttataccaccg 328 |||||||||| || ||||||||||||||||||| || ||| | ||||| || ||||| Sbjct: 2972 aaggatgttgttactgagaacgaatttgagaaaaaactgttgtcggatgtcattccacct 3031 Query: 329 aatgatatcggagtcacctttgatgatattggtgcgttggagaatgtaaaggaaacattg 388 | ||||| || || |||||||||||||||| || |||| ||||| || ||||| ||| Sbjct: 3032 agcgatataggtgtttcctttgatgatattggagctctggaaaatgtgaaagaaacgttg 3091 Query: 389 aaggagttggtgatgctcccactgcaaaggccggaattgttctgcaaagggcagttaacg 448 ||||||||||||||||| || || || || ||||||||||| |||||| ||| | || Sbjct: 3092 aaggagttggtgatgcttcctcttcagagaccggaattgtttgacaaaggccagctcaca 3151 Query: 449 aagccttgcaagggaatattgctctttggacctcctggcactgggaaaactatgcttgct 508 |||||| || || ||| || | |||||||||||||| ||||| || || ||||| || Sbjct: 3152 aagcctacgaaaggtatactgttgtttggacctcctggtactggaaagacgatgctggca 3211 Query: 509 aaagcagtagcaactgaagcaggcgctaacttcatcaatatatcaatgtcaagcatta 566 ||||||||||||||||| || ||||| || ||||||||||| |||||||| ||||||| Sbjct: 3212 aaagcagtagcaactgaggctggcgcaaatttcatcaatatctcaatgtccagcatta 3269
>gb|AY090948.1| Arabidopsis thaliana unknown protein (At4g02480) mRNA, complete cds Length = 4184 Score = 147 bits (74), Expect = 5e-32 Identities = 242/298 (81%) Strand = Plus / Plus Query: 269 aaggatgttgccacagagaacgaatttgagaaaaggcttttggcagatgttataccaccg 328 |||||||||| || ||||||||||||||||||| || ||| | ||||| || ||||| Sbjct: 2934 aaggatgttgttactgagaacgaatttgagaaaaaactgttgtcggatgtcattccacct 2993 Query: 329 aatgatatcggagtcacctttgatgatattggtgcgttggagaatgtaaaggaaacattg 388 | ||||| || || |||||||||||||||| || |||| ||||| || ||||| ||| Sbjct: 2994 agcgatataggtgtttcctttgatgatattggagctctggaaaatgtgaaagaaacgttg 3053 Query: 389 aaggagttggtgatgctcccactgcaaaggccggaattgttctgcaaagggcagttaacg 448 ||||||||||||||||| || || || || ||||||||||| |||||| ||| | || Sbjct: 3054 aaggagttggtgatgcttcctcttcagagaccggaattgtttgacaaaggccagctcaca 3113 Query: 449 aagccttgcaagggaatattgctctttggacctcctggcactgggaaaactatgcttgct 508 |||||| || || ||| || | |||||||||||||| ||||| || || ||||| || Sbjct: 3114 aagcctacgaaaggtatactgttgtttggacctcctggtactggaaagacgatgctggca 3173 Query: 509 aaagcagtagcaactgaagcaggcgctaacttcatcaatatatcaatgtcaagcatta 566 ||||||||||||||||| || ||||| || ||||||||||| |||||||| ||||||| Sbjct: 3174 aaagcagtagcaactgaggctggcgcaaatttcatcaatatctcaatgtccagcatta 3231
>gb|BT019198.1| Zea mays clone Contig871.F mRNA sequence Length = 1247 Score = 121 bits (61), Expect = 3e-24 Identities = 238/297 (80%) Strand = Plus / Plus Query: 269 aaggatgttgccacagagaacgaatttgagaaaaggcttttggcagatgttataccaccg 328 |||||||||| ||||||||| |||||||| ||| | ||| | ||||||| || || || Sbjct: 65 aaggatgttgtcacagagaatgaatttgaaaaacgtcttcttccagatgtcatccctcca 124 Query: 329 aatgatatcggagtcacctttgatgatattggtgcgttggagaatgtaaaggaaacattg 388 |||| || || || |||||||| |||||||| || || || ||||| |||||||| ||| Sbjct: 125 gatgagattggtgttacctttgaggatattggagcattagaaaatgtcaaggaaactttg 184 Query: 389 aaggagttggtgatgctcccactgcaaaggccggaattgttctgcaaagggcagttaacg 448 ||||||| || ||||| || |||||||||| || ||||||| |||||| || | | | Sbjct: 185 caggagttagttatgcttcctttgcaaaggcctgagttgttctccaaaggacaacttatg 244 Query: 449 aagccttgcaagggaatattgctctttggacctcctggcactgggaaaactatgcttgct 508 ||||| || || || |||||||| ||||| || |||||||| || || || |||||||| Sbjct: 245 aagccatgtaaagggatattgctttttggtccacctggcaccggtaagaccatgcttgcc 304 Query: 509 aaagcagtagcaactgaagcaggcgctaacttcatcaatatatcaatgtcaagcatt 565 ||||| || ||||| || || || ||||| || ||||| |||||||||||||||||| Sbjct: 305 aaagctgttgcaacagaggctggtgctaattttatcaacatatcaatgtcaagcatt 361
>ref|XM_479469.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3673 Score = 111 bits (56), Expect = 3e-21 Identities = 155/188 (82%) Strand = Plus / Plus Query: 371 aatgtaaaggaaacattgaaggagttggtgatgctcccactgcaaaggccggaattgttc 430 ||||| |||||||| |||||||| | |||||||| || |||||||||| ||||||||| Sbjct: 2518 aatgtcaaggaaactttgaaggaactagtgatgcttccgttgcaaaggcccgaattgttc 2577 Query: 431 tgcaaagggcagttaacgaagccttgcaagggaatattgctctttggacctcctggcact 490 | |||||| || | | |||||| || |||||||||||||| ||||| || ||||| || Sbjct: 2578 tccaaaggacaacttatgaagccatgtaagggaatattgctttttggcccacctggtacg 2637 Query: 491 gggaaaactatgcttgctaaagcagtagcaactgaagcaggcgctaacttcatcaatata 550 ||||| || |||||||||||||| || ||||| || || ||||| || || ||||| ||| Sbjct: 2638 gggaagaccatgcttgctaaagctgttgcaacagaggctggcgccaattttatcaacata 2697 Query: 551 tcaatgtc 558 |||||||| Sbjct: 2698 tcaatgtc 2705
>dbj|AK067432.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013100B13, full insert sequence Length = 3673 Score = 111 bits (56), Expect = 3e-21 Identities = 155/188 (82%) Strand = Plus / Plus Query: 371 aatgtaaaggaaacattgaaggagttggtgatgctcccactgcaaaggccggaattgttc 430 ||||| |||||||| |||||||| | |||||||| || |||||||||| ||||||||| Sbjct: 2518 aatgtcaaggaaactttgaaggaactagtgatgcttccgttgcaaaggcccgaattgttc 2577 Query: 431 tgcaaagggcagttaacgaagccttgcaagggaatattgctctttggacctcctggcact 490 | |||||| || | | |||||| || |||||||||||||| ||||| || ||||| || Sbjct: 2578 tccaaaggacaacttatgaagccatgtaagggaatattgctttttggcccacctggtacg 2637 Query: 491 gggaaaactatgcttgctaaagcagtagcaactgaagcaggcgctaacttcatcaatata 550 ||||| || |||||||||||||| || ||||| || || ||||| || || ||||| ||| Sbjct: 2638 gggaagaccatgcttgctaaagctgttgcaacagaggctggcgccaattttatcaacata 2697 Query: 551 tcaatgtc 558 |||||||| Sbjct: 2698 tcaatgtc 2705
>gb|AC161032.19| Medicago truncatula clone mth2-21b7, complete sequence Length = 130355 Score = 97.6 bits (49), Expect = 4e-17 Identities = 100/117 (85%) Strand = Plus / Plus Query: 450 agccttgcaagggaatattgctctttggacctcctggcactgggaaaactatgcttgcta 509 |||||||||||||||||||||| || || || |||||||| || ||||| |||||||| | Sbjct: 19290 agccttgcaagggaatattgcttttcggtccccctggcacgggaaaaacaatgcttgcaa 19349 Query: 510 aagcagtagcaactgaagcaggcgctaacttcatcaatatatcaatgtcaagcatta 566 | || |||||||||||||| || || || |||||||| || |||||||| ||||||| Sbjct: 19350 aggctgtagcaactgaagctggagcaaatttcatcaacatttcaatgtccagcatta 19406 Score = 81.8 bits (41), Expect = 2e-12 Identities = 98/117 (83%) Strand = Plus / Plus Query: 450 agccttgcaagggaatattgctctttggacctcctggcactgggaaaactatgcttgcta 509 |||||||||||||||||||||| ||||| || |||||||| || ||||| |||||||| | Sbjct: 38440 agccttgcaagggaatattgctttttggcccccctggcacgggaaaaacaatgcttgcaa 38499 Query: 510 aagcagtagcaactgaagcaggcgctaacttcatcaatatatcaatgtcaagcatta 566 | || |||||||| ||||| || || || ||||| || || || ||||| ||||||| Sbjct: 38500 aggcggtagcaaccgaagctggagcaaatttcattaacatctccatgtctagcatta 38556
>emb|AL161494.2|ATCHRIV6 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 6 Length = 194892 Score = 91.7 bits (46), Expect = 2e-15 Identities = 82/94 (87%) Strand = Plus / Minus Query: 473 tttggacctcctggcactgggaaaactatgcttgctaaagcagtagcaactgaagcaggc 532 |||||||||||||| ||||| || || ||||| || ||||||||||||||||| || ||| Sbjct: 119066 tttggacctcctggtactggaaagacgatgctggcaaaagcagtagcaactgaggctggc 119007 Query: 533 gctaacttcatcaatatatcaatgtcaagcatta 566 || || ||||||||||| |||||||| ||||||| Sbjct: 119006 gcaaatttcatcaatatctcaatgtccagcatta 118973 Score = 87.7 bits (44), Expect = 4e-14 Identities = 131/160 (81%) Strand = Plus / Minus Query: 270 aggatgttgccacagagaacgaatttgagaaaaggcttttggcagatgttataccaccga 329 ||||||||| || ||||||||||||||||||| || ||| | ||||| || ||||| | Sbjct: 119354 aggatgttgttactgagaacgaatttgagaaaaaactgttgtcggatgtcattccaccta 119295 Query: 330 atgatatcggagtcacctttgatgatattggtgcgttggagaatgtaaaggaaacattga 389 ||||| || || |||||||||||||||| || |||| ||||| || ||||| |||| Sbjct: 119294 gcgatataggtgtttcctttgatgatattggagctctggaaaatgtgaaagaaacgttga 119235 Query: 390 aggagttggtgatgctcccactgcaaaggccggaattgtt 429 |||||||||||||||| || || || || ||||||||||| Sbjct: 119234 aggagttggtgatgcttcctcttcagagaccggaattgtt 119195
>gb|AF069298.1|T14P8 Arabidopsis thaliana BAC T14P8 Length = 94536 Score = 91.7 bits (46), Expect = 2e-15 Identities = 82/94 (87%) Strand = Plus / Plus Query: 473 tttggacctcctggcactgggaaaactatgcttgctaaagcagtagcaactgaagcaggc 532 |||||||||||||| ||||| || || ||||| || ||||||||||||||||| || ||| Sbjct: 27548 tttggacctcctggtactggaaagacgatgctggcaaaagcagtagcaactgaggctggc 27607 Query: 533 gctaacttcatcaatatatcaatgtcaagcatta 566 || || ||||||||||| |||||||| ||||||| Sbjct: 27608 gcaaatttcatcaatatctcaatgtccagcatta 27641 Score = 87.7 bits (44), Expect = 4e-14 Identities = 131/160 (81%) Strand = Plus / Plus Query: 270 aggatgttgccacagagaacgaatttgagaaaaggcttttggcagatgttataccaccga 329 ||||||||| || ||||||||||||||||||| || ||| | ||||| || ||||| | Sbjct: 27260 aggatgttgttactgagaacgaatttgagaaaaaactgttgtcggatgtcattccaccta 27319 Query: 330 atgatatcggagtcacctttgatgatattggtgcgttggagaatgtaaaggaaacattga 389 ||||| || || |||||||||||||||| || |||| ||||| || ||||| |||| Sbjct: 27320 gcgatataggtgtttcctttgatgatattggagctctggaaaatgtgaaagaaacgttga 27379 Query: 390 aggagttggtgatgctcccactgcaaaggccggaattgtt 429 |||||||||||||||| || || || || ||||||||||| Sbjct: 27380 aggagttggtgatgcttcctcttcagagaccggaattgtt 27419
>ref|NM_100170.2| Arabidopsis thaliana ATP binding / ATPase/ nucleoside-triphosphatase/ nucleotide binding AT1G02890 mRNA, complete cds Length = 4148 Score = 85.7 bits (43), Expect = 1e-13 Identities = 172/215 (80%) Strand = Plus / Plus Query: 352 tgatattggtgcgttggagaatgtaaaggaaacattgaaggagttggtgatgctcccact 411 ||||||||| || ||||| ||||| || || || |||||||||||||||||||| || || Sbjct: 2959 tgatattggggctttggaaaatgtgaaagataccttgaaggagttggtgatgcttcctct 3018 Query: 412 gcaaaggccggaattgttctgcaaagggcagttaacgaagccttgcaagggaatattgct 471 ||||| || |||||||| ||||||| || | || |||||| ||||| ||| | | Sbjct: 3019 tcaaagacccgaattgtttggcaaaggtcaacttacaaagcctacaaagggtatactatt 3078 Query: 472 ctttggacctcctggcactgggaaaactatgcttgctaaagcagtagcaactgaagcagg 531 |||||||| ||||| || ||||| || ||||| || ||||| |||||||| || || || Sbjct: 3079 gtttggaccgcctggtacggggaagacaatgctggcaaaagctgtagcaaccgaggctgg 3138 Query: 532 cgctaacttcatcaatatatcaatgtcaagcatta 566 || ||||| |||||||| |||||||| ||||||| Sbjct: 3139 ggcaaactttatcaatatttcaatgtccagcatta 3173
>dbj|AK066938.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013093A20, full insert sequence Length = 2902 Score = 79.8 bits (40), Expect = 9e-12 Identities = 232/296 (78%) Strand = Plus / Plus Query: 269 aaggatgttgccacagagaacgaatttgagaaaaggcttttggcagatgttataccaccg 328 |||||| |||| || ||||| |||||||| || | ||| | || ||||||||||| ||| Sbjct: 1339 aaggatattgctactgagaatgaatttgaaaagcgacttcttgctgatgttatacccccg 1398 Query: 329 aatgatatcggagtcacctttgatgatattggtgcgttggagaatgtaaaggaaacattg 388 | || || || ||||||||||| || ||||| || ||||| | ||| |||||||| | Sbjct: 1399 gacgaaataggtgtcacctttgaggacattggggcattggaaagtgtcaaggaaactctt 1458 Query: 389 aaggagttggtgatgctcccactgcaaaggccggaattgttctgcaaagggcagttaacg 448 |||||||| |||||||| || |||||||||| |||||||| | || ||| || | | | Sbjct: 1459 aaggagttagtgatgctacctttgcaaaggcctgaattgttttccagaggtcaacttatg 1518 Query: 449 aagccttgcaagggaatattgctctttggacctcctggcactgggaaaactatgcttgct 508 ||||| || || |||||||| || ||||| || ||||| || || || || |||||||| Sbjct: 1519 aagccatgtaaaggaatattactttttggcccgcctggtacaggaaagacaatgcttgcc 1578 Query: 509 aaagcagtagcaactgaagcaggcgctaacttcatcaatatatcaatgtcaagcat 564 ||||| || || || || || || || || ||||| |||||||||||||| ||||| Sbjct: 1579 aaagctgtggctacagaggctggtgcgaatttcataaatatatcaatgtcgagcat 1634
>ref|NM_104894.2| Arabidopsis thaliana ATP binding / ATPase/ nucleoside-triphosphatase/ nucleotide binding AT1G62130 mRNA, complete cds Length = 3078 Score = 75.8 bits (38), Expect = 1e-10 Identities = 110/134 (82%) Strand = Plus / Plus Query: 428 ttctgcaaagggcagttaacgaagccttgcaagggaatattgctctttggacctcctggc 487 |||||||| ||||| ||||| |||||||| || ||||| | | ||||||||| |||| Sbjct: 2281 ttctgcaaggggcaattaacaaagccttgtaacggaattctcttatttggaccttctgga 2340 Query: 488 actgggaaaactatgcttgctaaagcagtagcaactgaagcaggcgctaacttcatcaat 547 ||||| || || |||||||| || ||||| ||||| ||||| || |||||| ||||||| Sbjct: 2341 actggaaagaccatgcttgcaaaggcagtggcaacggaagctggtgctaacctcatcaac 2400 Query: 548 atatcaatgtcaag 561 || ||||||||||| Sbjct: 2401 atgtcaatgtcaag 2414
>ref|NM_118619.2| Arabidopsis thaliana ATP binding / nucleoside-triphosphatase/ nucleotide binding AT4G24860 mRNA, complete cds Length = 3400 Score = 73.8 bits (37), Expect = 6e-10 Identities = 112/137 (81%) Strand = Plus / Plus Query: 428 ttctgcaaagggcagttaacgaagccttgcaagggaatattgctctttggacctcctggc 487 |||||||| ||| | ||||| |||||||| || ||||| | | |||||||||||||| Sbjct: 2536 ttctgcaagggggaattaacaaagccttgtaaaggaattcttttatttggacctcctgga 2595 Query: 488 actgggaaaactatgcttgctaaagcagtagcaactgaagcaggcgctaacttcatcaat 547 ||||| || || |||||||| |||||||| |||| ||||| | || ||||||||||| Sbjct: 2596 actggaaagaccatgcttgcaaaagcagtggcaaaggaagctgatgcgaacttcatcaac 2655 Query: 548 atatcaatgtcaagcat 564 || |||||||||||||| Sbjct: 2656 atctcaatgtcaagcat 2672
>gb|AY142498.1| Arabidopsis thaliana unknown protein (At4g24850) mRNA, complete cds Length = 1360 Score = 73.8 bits (37), Expect = 6e-10 Identities = 112/137 (81%) Strand = Plus / Plus Query: 428 ttctgcaaagggcagttaacgaagccttgcaagggaatattgctctttggacctcctggc 487 |||||||| ||| | ||||| |||||||| || ||||| | | |||||||||||||| Sbjct: 496 ttctgcaagggggaattaacaaagccttgtaaaggaattcttttatttggacctcctgga 555 Query: 488 actgggaaaactatgcttgctaaagcagtagcaactgaagcaggcgctaacttcatcaat 547 ||||| || || |||||||| |||||||| |||| ||||| | || ||||||||||| Sbjct: 556 actggaaagaccatgcttgcaaaagcagtggcaaaggaagctgatgcgaacttcatcaac 615 Query: 548 atatcaatgtcaagcat 564 || |||||||||||||| Sbjct: 616 atctcaatgtcaagcat 632
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 73.8 bits (37), Expect = 6e-10 Identities = 85/101 (84%) Strand = Plus / Plus Query: 458 aagggaatattgctctttggacctcctggcactgggaaaactatgcttgctaaagcagta 517 |||||||||||||| ||||| || ||||| || ||||| || |||||||||||||| || Sbjct: 28379436 aagggaatattgctttttggcccacctggtacggggaagaccatgcttgctaaagctgtt 28379495 Query: 518 gcaactgaagcaggcgctaacttcatcaatatatcaatgtc 558 ||||| || || ||||| || || ||||| ||||||||||| Sbjct: 28379496 gcaacagaggctggcgccaattttatcaacatatcaatgtc 28379536
>dbj|AP004300.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0470D12 Length = 157248 Score = 73.8 bits (37), Expect = 6e-10 Identities = 85/101 (84%) Strand = Plus / Plus Query: 458 aagggaatattgctctttggacctcctggcactgggaaaactatgcttgctaaagcagta 517 |||||||||||||| ||||| || ||||| || ||||| || |||||||||||||| || Sbjct: 104999 aagggaatattgctttttggcccacctggtacggggaagaccatgcttgctaaagctgtt 105058 Query: 518 gcaactgaagcaggcgctaacttcatcaatatatcaatgtc 558 ||||| || || ||||| || || ||||| ||||||||||| Sbjct: 105059 gcaacagaggctggcgccaattttatcaacatatcaatgtc 105099
>emb|AL161562.2|ATCHRIV62 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 62 Length = 197070 Score = 71.9 bits (36), Expect = 2e-09 Identities = 78/92 (84%) Strand = Plus / Minus Query: 473 tttggacctcctggcactgggaaaactatgcttgctaaagcagtagcaactgaagcaggc 532 |||||||||||||| ||||| || || |||||||| |||||||| |||| ||||| | Sbjct: 77224 tttggacctcctggaactggaaagaccatgcttgcaaaagcagtggcaaaggaagctgat 77165 Query: 533 gctaacttcatcaatatatcaatgtcaagcat 564 || ||||||||||| || |||||||||||||| Sbjct: 77164 gcgaacttcatcaacatctcaatgtcaagcat 77133
>emb|AL049657.1|ATF6I7 Arabidopsis thaliana DNA chromosome 4, BAC clone F6I7 (ESSA project) Length = 95185 Score = 71.9 bits (36), Expect = 2e-09 Identities = 78/92 (84%) Strand = Plus / Minus Query: 473 tttggacctcctggcactgggaaaactatgcttgctaaagcagtagcaactgaagcaggc 532 |||||||||||||| ||||| || || |||||||| |||||||| |||| ||||| | Sbjct: 47800 tttggacctcctggaactggaaagaccatgcttgcaaaagcagtggcaaaggaagctgat 47741 Query: 533 gctaacttcatcaatatatcaatgtcaagcat 564 || ||||||||||| || |||||||||||||| Sbjct: 47740 gcgaacttcatcaacatctcaatgtcaagcat 47709
>gb|AC000375.1|F19K23 Sequence of BAC F19K23 from Arabidopsis thaliana chromosome 1, complete sequence Length = 97451 Score = 65.9 bits (33), Expect = 1e-07 Identities = 75/89 (84%) Strand = Plus / Minus Query: 473 tttggacctcctggcactgggaaaactatgcttgctaaagcagtagcaactgaagcaggc 532 ||||||||| |||| ||||| || || |||||||| || ||||| ||||| ||||| || Sbjct: 25159 tttggaccttctggaactggaaagaccatgcttgcaaaggcagtggcaacggaagctggt 25100 Query: 533 gctaacttcatcaatatatcaatgtcaag 561 |||||| ||||||| || ||||||||||| Sbjct: 25099 gctaacctcatcaacatgtcaatgtcaag 25071
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 63.9 bits (32), Expect = 5e-07 Identities = 95/116 (81%) Strand = Plus / Minus Query: 314 gatgttataccaccgaatgatatcggagtcacctttgatgatattggtgcgttggagaat 373 ||||||||||| ||| | || || || ||||||||||| || ||||| || ||||| | | Sbjct: 12813991 gatgttatacccccggacgaaataggtgtcacctttgaggacattggggcattggaaagt 12813932 Query: 374 gtaaaggaaacattgaaggagttggtgatgctcccactgcaaaggccggaattgtt 429 || |||||||| | |||||||| |||||||| || |||||||||| |||||||| Sbjct: 12813931 gtcaaggaaactcttaaggagttagtgatgctacctttgcaaaggcctgaattgtt 12813876 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 475 tggacctcctggcactgggaa 495 ||||||||||||||||||||| Sbjct: 21484016 tggacctcctggcactgggaa 21484036 Score = 40.1 bits (20), Expect = 7.7 Identities = 83/104 (79%) Strand = Plus / Minus Query: 461 ggaatattgctctttggacctcctggcactgggaaaactatgcttgctaaagcagtagca 520 |||||||| || ||||| || ||||| || || || || |||||||| ||||| || || Sbjct: 12813443 ggaatattactttttggcccgcctggtacaggaaagacaatgcttgccaaagctgtggct 12813384 Query: 521 actgaagcaggcgctaacttcatcaatatatcaatgtcaagcat 564 || || || || || || ||||| |||||||||||||| ||||| Sbjct: 12813383 acagaggctggtgcgaatttcataaatatatcaatgtcgagcat 12813340
>gb|AC148339.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone B1339A06, complete sequence Length = 132243 Score = 63.9 bits (32), Expect = 5e-07 Identities = 95/116 (81%) Strand = Plus / Minus Query: 314 gatgttataccaccgaatgatatcggagtcacctttgatgatattggtgcgttggagaat 373 ||||||||||| ||| | || || || ||||||||||| || ||||| || ||||| | | Sbjct: 52207 gatgttatacccccggacgaaataggtgtcacctttgaggacattggggcattggaaagt 52148 Query: 374 gtaaaggaaacattgaaggagttggtgatgctcccactgcaaaggccggaattgtt 429 || |||||||| | |||||||| |||||||| || |||||||||| |||||||| Sbjct: 52147 gtcaaggaaactcttaaggagttagtgatgctacctttgcaaaggcctgaattgtt 52092 Score = 40.1 bits (20), Expect = 7.7 Identities = 83/104 (79%) Strand = Plus / Minus Query: 461 ggaatattgctctttggacctcctggcactgggaaaactatgcttgctaaagcagtagca 520 |||||||| || ||||| || ||||| || || || || |||||||| ||||| || || Sbjct: 51659 ggaatattactttttggcccgcctggtacaggaaagacaatgcttgccaaagctgtggct 51600 Query: 521 actgaagcaggcgctaacttcatcaatatatcaatgtcaagcat 564 || || || || || || ||||| |||||||||||||| ||||| Sbjct: 51599 acagaggctggtgcgaatttcataaatatatcaatgtcgagcat 51556
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 63.9 bits (32), Expect = 5e-07 Identities = 95/116 (81%) Strand = Plus / Minus Query: 314 gatgttataccaccgaatgatatcggagtcacctttgatgatattggtgcgttggagaat 373 ||||||||||| ||| | || || || ||||||||||| || ||||| || ||||| | | Sbjct: 12810754 gatgttatacccccggacgaaataggtgtcacctttgaggacattggggcattggaaagt 12810695 Query: 374 gtaaaggaaacattgaaggagttggtgatgctcccactgcaaaggccggaattgtt 429 || |||||||| | |||||||| |||||||| || |||||||||| |||||||| Sbjct: 12810694 gtcaaggaaactcttaaggagttagtgatgctacctttgcaaaggcctgaattgtt 12810639 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 475 tggacctcctggcactgggaa 495 ||||||||||||||||||||| Sbjct: 21477045 tggacctcctggcactgggaa 21477065 Score = 40.1 bits (20), Expect = 7.7 Identities = 83/104 (79%) Strand = Plus / Minus Query: 461 ggaatattgctctttggacctcctggcactgggaaaactatgcttgctaaagcagtagca 520 |||||||| || ||||| || ||||| || || || || |||||||| ||||| || || Sbjct: 12810206 ggaatattactttttggcccgcctggtacaggaaagacaatgcttgccaaagctgtggct 12810147 Query: 521 actgaagcaggcgctaacttcatcaatatatcaatgtcaagcat 564 || || || || || || ||||| |||||||||||||| ||||| Sbjct: 12810146 acagaggctggtgcgaatttcataaatatatcaatgtcgagcat 12810103
>gb|AC009525.3| Arabidopsis thaliana chromosome I BAC F22D16 genomic sequence, complete sequence Length = 100239 Score = 61.9 bits (31), Expect = 2e-06 Identities = 73/87 (83%) Strand = Plus / Plus Query: 352 tgatattggtgcgttggagaatgtaaaggaaacattgaaggagttggtgatgctcccact 411 ||||||||| || ||||| ||||| || || || |||||||||||||||||||| || || Sbjct: 45601 tgatattggggctttggaaaatgtgaaagataccttgaaggagttggtgatgcttcctct 45660 Query: 412 gcaaaggccggaattgttctgcaaagg 438 ||||| || |||||||| ||||||| Sbjct: 45661 tcaaagacccgaattgtttggcaaagg 45687
>ref|XM_662535.1| Cryptosporidium hominis TU502 26S proteasome AAA-ATPase subunit RPT3 (Chro.40284) partial mRNA Length = 1206 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 475 tggacctcctggcactgggaaaactatgcttgctaaagc 513 |||||||||||| ||||| |||||||||||||||||||| Sbjct: 561 tggacctcctggaactggtaaaactatgcttgctaaagc 599
>gb|AC126782.23| Medicago truncatula clone mth2-14p11, complete sequence Length = 135659 Score = 61.9 bits (31), Expect = 2e-06 Identities = 133/167 (79%) Strand = Plus / Minus Query: 281 acagagaacgaatttgagaaaaggcttttggcagatgttataccaccgaatgatatcgga 340 ||||| ||||| ||||| || |||||| ||| |||||||| ||||| || || || || Sbjct: 90164 acagaaaacgagtttgaaaagaggcttctgggtgatgttattccacctaacgacattggt 90105 Query: 341 gtcacctttgatgatattggtgcgttggagaatgtaaaggaaacattgaaggagttggtg 400 || || |||||||||||||| || | || ||||| ||||| ||| ||||||| |||||| Sbjct: 90104 gttacttttgatgatattggagctcttgaaaatgtcaaggatacactgaaggaattggtg 90045 Query: 401 atgctcccactgcaaaggccggaattgttctgcaaagggcagttaac 447 ||||| || | || ||||| || | |||||||| ||||||||||| Sbjct: 90044 atgcttcctttacagaggcccgagcttttctgcaaggggcagttaac 89998 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 536 aacttcatcaatatatcaatgtcaagcat 564 |||||||||||||| || ||||||||||| Sbjct: 89221 aacttcatcaatatttcgatgtcaagcat 89193
>gb|AE012985.1| Thermoanaerobacter tengcongensis MB4, section 12 of 244 of the complete genome Length = 10523 Score = 58.0 bits (29), Expect = 3e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 457 caagggaatattgctctttggacctcctggcactgggaaaactatgcttgctaaagc 513 |||||| |||||||| |||| |||||||| || ||||||||| ||||||||||||| Sbjct: 9226 caaggggatattgcttattgggcctcctggaacggggaaaactttgcttgctaaagc 9282
>gb|AC125783.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBb0039K08, complete sequence Length = 122163 Score = 58.0 bits (29), Expect = 3e-05 Identities = 59/69 (85%) Strand = Plus / Minus Query: 28 gtttctgagtcgcagtgcgatcgaatgcaatgaccttgaagaattgttcattaaggatca 87 ||||||||| |||| || || ||||||| ||||||||||||||| ||||| || ||||| Sbjct: 114 gtttctgagccgcaatggaattgaatgcagtgaccttgaagaattattcatcaaagatca 55 Query: 88 gtcactgac 96 |||||||| Sbjct: 54 atcactgac 46
>ref|NM_118907.2| Arabidopsis thaliana ATP binding / ATPase/ nucleoside-triphosphatase/ nucleotide binding AT4G27680 mRNA, complete cds Length = 1610 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 467 ttgctctttggacctcctggcactgggaaaactatgcttgctaa 510 ||||||| |||||||||||| ||||| || |||||||||||||| Sbjct: 524 ttgctctatggacctcctggtactggaaagactatgcttgctaa 567
>gb|BT000126.1| Arabidopsis thaliana putative protein (At4g27680) mRNA, complete cds Length = 1240 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 467 ttgctctttggacctcctggcactgggaaaactatgcttgctaa 510 ||||||| |||||||||||| ||||| || |||||||||||||| Sbjct: 367 ttgctctatggacctcctggtactggaaagactatgcttgctaa 410
>emb|AL161571.2|ATCHRIV67 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 67 Length = 200001 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 467 ttgctctttggacctcctggcactgggaaaactatgcttgctaa 510 ||||||| |||||||||||| ||||| || |||||||||||||| Sbjct: 132317 ttgctctatggacctcctggtactggaaagactatgcttgctaa 132360
>emb|AL035602.1|ATT29A15 Arabidopsis thaliana DNA chromosome 4, BAC clone T29A15 (ESSA project) Length = 95679 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 467 ttgctctttggacctcctggcactgggaaaactatgcttgctaa 510 ||||||| |||||||||||| ||||| || |||||||||||||| Sbjct: 71607 ttgctctatggacctcctggtactggaaagactatgcttgctaa 71650
>gb|CP000077.1| Sulfolobus acidocaldarius DSM 639, complete genome Length = 2225959 Score = 56.0 bits (28), Expect = 1e-04 Identities = 46/52 (88%) Strand = Plus / Plus Query: 475 tggacctcctggcactgggaaaactatgcttgctaaagcagtagcaactgaa 526 |||||| ||||||||||| ||||| |||||||| ||||| |||||| ||||| Sbjct: 520409 tggaccccctggcactggaaaaaccatgcttgccaaagctgtagcagctgaa 520460
>gb|AY093063.1| Arabidopsis thaliana putative protein (At4g27680) mRNA, complete cds Length = 1500 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 467 ttgctctttggacctcctggcactgggaaaactatgcttgctaa 510 ||||||| |||||||||||| ||||| || |||||||||||||| Sbjct: 519 ttgctctatggacctcctggtactggaaagactatgcttgctaa 562
>gb|AY229998.1| Sulfolobus acidocaldarius strain DSM 639 putative 26S proteasome regulatory subunit 4, putative MBP-like protein, putative GTP-binding protein (hflx), conserved hypothetical protein, and conserved hypothetical protein genes, complete cds Length = 4449 Score = 56.0 bits (28), Expect = 1e-04 Identities = 46/52 (88%) Strand = Plus / Minus Query: 475 tggacctcctggcactgggaaaactatgcttgctaaagcagtagcaactgaa 526 |||||| ||||||||||| ||||| |||||||| ||||| |||||| ||||| Sbjct: 975 tggaccccctggcactggaaaaaccatgcttgccaaagctgtagcagctgaa 924
>gb|AY085265.1| Arabidopsis thaliana clone 142160 mRNA, complete sequence Length = 1520 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 467 ttgctctttggacctcctggcactgggaaaactatgcttgctaa 510 ||||||| |||||||||||| ||||| || |||||||||||||| Sbjct: 434 ttgctctatggacctcctggtactggaaagactatgcttgctaa 477
>ref|NM_124734.2| Arabidopsis thaliana ATP binding / ATP-dependent peptidase/ ATPase/ nucleoside-triphosphatase/ nucleotide binding / serine-type endopeptidase AT5G53540 mRNA, complete cds Length = 1625 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 479 cctcctggcactgggaaaactatgcttgctaaagc 513 |||||||| |||||||| ||||||||||||||||| Sbjct: 526 cctcctggaactgggaagactatgcttgctaaagc 560
>gb|AY058857.1| Arabidopsis thaliana AT5g53540/MNC6_8 mRNA, complete cds Length = 1490 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 479 cctcctggcactgggaaaactatgcttgctaaagc 513 |||||||| |||||||| ||||||||||||||||| Sbjct: 526 cctcctggaactgggaagactatgcttgctaaagc 560
>ref|XM_625842.1| Cryptosporidium parvum Iowa II 26S proteasome regulatory subunit 26b like AAA ATpase (cgd4_2540), partial mRNA Length = 1206 Score = 54.0 bits (27), Expect = 5e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 475 tggacctcctggcactgggaaaactatgcttgctaaagc 513 ||||||||| || ||||| |||||||||||||||||||| Sbjct: 561 tggacctcccggaactggtaaaactatgcttgctaaagc 599
>emb|BX832791.1|CNS0A0J8 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL12ZF07 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1354 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 479 cctcctggcactgggaaaactatgcttgctaaagc 513 |||||||| |||||||| ||||||||||||||||| Sbjct: 446 cctcctggaactgggaagactatgcttgctaaagc 480
>emb|BX831377.1|CNS0A0O8 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS84ZD01 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1388 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 479 cctcctggcactgggaaaactatgcttgctaaagc 513 |||||||| |||||||| ||||||||||||||||| Sbjct: 439 cctcctggaactgggaagactatgcttgctaaagc 473
>emb|BX830961.1|CNS0A0PQ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS42ZB10 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1355 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 479 cctcctggcactgggaaaactatgcttgctaaagc 513 |||||||| |||||||| ||||||||||||||||| Sbjct: 439 cctcctgggactgggaagactatgcttgctaaagc 473
>gb|AY089146.1| Arabidopsis thaliana clone 38213 mRNA, complete sequence Length = 1407 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 479 cctcctggcactgggaaaactatgcttgctaaagc 513 |||||||| |||||||| ||||||||||||||||| Sbjct: 436 cctcctggaactgggaagactatgcttgctaaagc 470
>gb|BT002644.1| Arabidopsis thaliana At5g53540/MNC6_8 gene, complete cds Length = 1212 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 479 cctcctggcactgggaaaactatgcttgctaaagc 513 |||||||| |||||||| ||||||||||||||||| Sbjct: 388 cctcctggaactgggaagactatgcttgctaaagc 422
>dbj|AB015476.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MNC6 Length = 82952 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 479 cctcctggcactgggaaaactatgcttgctaaagc 513 |||||||| |||||||| ||||||||||||||||| Sbjct: 36862 cctcctggaactgggaagactatgcttgctaaagc 36828
>ref|XM_857738.1| PREDICTED: Canis familiaris similar to spastin isoform 1, transcript variant 2 (LOC608582), mRNA Length = 1959 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 470 ctctttggacctcctggcactgggaaaactatgcttgctaaagcagtagc 519 |||||||| || ||||| | ||||||||| ||||| |||||||||||||| Sbjct: 1066 ctctttggtccacctggaaatgggaaaacaatgctggctaaagcagtagc 1115
>ref|XM_845880.1| PREDICTED: Canis familiaris similar to spastin isoform 1, transcript variant 1 (LOC608582), mRNA Length = 2055 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 470 ctctttggacctcctggcactgggaaaactatgcttgctaaagcagtagc 519 |||||||| || ||||| | ||||||||| ||||| |||||||||||||| Sbjct: 1162 ctctttggtccacctggaaatgggaaaacaatgctggctaaagcagtagc 1211
>gb|AF540879.1| Sus scrofa spastin (SPG4) mRNA, complete cds Length = 2231 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 470 ctctttggacctcctggcactgggaaaactatgcttgctaaagcagtagc 519 |||||||| || ||||| | ||||||||| ||||| |||||||||||||| Sbjct: 1131 ctctttggtccacctggaaatgggaaaacaatgctggctaaagcagtagc 1180
>gb|AC156245.2| Xenopus tropicalis clone ISB1-123H20, complete sequence Length = 43215 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Plus Query: 474 ttggacctcctggcactgggaaaactatgcttgctaaagcagtagc 519 ||||||||||||| || || ||||| |||||||||||||| ||||| Sbjct: 14006 ttggacctcctggaacaggcaaaaccatgcttgctaaagccgtagc 14051
>dbj|BA000023.2| Sulfolobus tokodaii str. 7 DNA, complete genome Length = 2694756 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 473 tttggacctcctggcactgggaaaactatgcttgctaa 510 ||||| |||||||| ||||| ||||||||||||||||| Sbjct: 232769 tttggtcctcctggtactggtaaaactatgcttgctaa 232806 Score = 44.1 bits (22), Expect = 0.49 Identities = 34/38 (89%) Strand = Plus / Plus Query: 473 tttggacctcctggcactgggaaaactatgcttgctaa 510 ||||| |||||||| ||||| || |||||||||||||| Sbjct: 393439 tttggtcctcctggtactggtaagactatgcttgctaa 393476
>ref|NM_213749.1| Sus scrofa spastin (SPG4), mRNA Length = 2231 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 470 ctctttggacctcctggcactgggaaaactatgcttgctaaagcagtagc 519 |||||||| || ||||| | ||||||||| ||||| |||||||||||||| Sbjct: 1131 ctctttggtccacctggaaatgggaaaacaatgctggctaaagcagtagc 1180
>gb|U43398.1|STU43398 Solanum tuberosum POTATP1 mRNA, complete cds Length = 1473 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Plus Query: 467 ttgctctttggacctcctggcactgggaaaactatgcttgctaaagcagtagca 520 ||||||| ||| || || ||||||||||||||||||||||| || || |||||| Sbjct: 614 ttgctctatggtccaccaggcactgggaaaactatgcttgcaaaggctgtagca 667
>gb|BC000612.2| Homo sapiens katanin p60 subunit A-like 1, mRNA (cDNA clone MGC:2599 IMAGE:3347282), complete cds Length = 1691 Score = 50.1 bits (25), Expect = 0.008 Identities = 46/53 (86%) Strand = Plus / Plus Query: 474 ttggacctcctggcactgggaaaactatgcttgctaaagcagtagcaactgaa 526 ||||||| || |||||||| ||||||||||| |||||||| || || |||||| Sbjct: 871 ttggacccccaggcactggtaaaactatgctagctaaagctgttgccactgaa 923
>ref|NM_032116.3| Homo sapiens katanin p60 subunit A-like 1 (KATNAL1), transcript variant 1, mRNA Length = 7536 Score = 50.1 bits (25), Expect = 0.008 Identities = 46/53 (86%) Strand = Plus / Plus Query: 474 ttggacctcctggcactgggaaaactatgcttgctaaagcagtagcaactgaa 526 ||||||| || |||||||| ||||||||||| |||||||| || || |||||| Sbjct: 871 ttggacccccaggcactggtaaaactatgctagctaaagctgttgccactgaa 923
>ref|NM_001014380.1| Homo sapiens katanin p60 subunit A-like 1 (KATNAL1), transcript variant 2, mRNA Length = 7506 Score = 50.1 bits (25), Expect = 0.008 Identities = 46/53 (86%) Strand = Plus / Plus Query: 474 ttggacctcctggcactgggaaaactatgcttgctaaagcagtagcaactgaa 526 ||||||| || |||||||| ||||||||||| |||||||| || || |||||| Sbjct: 841 ttggacccccaggcactggtaaaactatgctagctaaagctgttgccactgaa 893
>emb|AL356750.16| Human DNA sequence from clone RP11-374F3 on chromosome 13 Contains the KATNAL1 gene for katanin p60 subunit A-like 1, a peroxiredoxin 2 (PRDX2) pseudogene, two novel genes and two CpG islands, complete sequence Length = 182303 Score = 50.1 bits (25), Expect = 0.008 Identities = 46/53 (86%) Strand = Plus / Minus Query: 474 ttggacctcctggcactgggaaaactatgcttgctaaagcagtagcaactgaa 526 ||||||| || |||||||| ||||||||||| |||||||| || || |||||| Sbjct: 32981 ttggacccccaggcactggtaaaactatgctagctaaagctgttgccactgaa 32929
>dbj|AK097423.1| Homo sapiens cDNA FLJ40104 fis, clone TESTI2006111, moderately similar to Xenopus laevis katanin p60 mRNA Length = 1634 Score = 50.1 bits (25), Expect = 0.008 Identities = 46/53 (86%) Strand = Plus / Plus Query: 474 ttggacctcctggcactgggaaaactatgcttgctaaagcagtagcaactgaa 526 ||||||| || |||||||| ||||||||||| |||||||| || || |||||| Sbjct: 841 ttggacccccaggcactggtaaaactatgctagctaaagctgttgccactgaa 893
>ref|XM_695622.1| PREDICTED: Danio rerio similar to Mov10, Moloney leukemia virus 10, homolog (LOC571974), mRNA Length = 1768 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Plus Query: 471 tctttggacctcctggcactgggaaaact 499 |||||||||||||||||||||| |||||| Sbjct: 92 tctttggacctcctggcactggcaaaact 120
>ref|XM_690145.1| PREDICTED: Danio rerio similar to Mov10, Moloney leukemia virus 10, homolog (LOC566858), partial mRNA Length = 2229 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Plus Query: 471 tctttggacctcctggcactgggaaaact 499 |||||||||||||||||||||| |||||| Sbjct: 2012 tctttggacctcctggcactggcaaaact 2040 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Plus Query: 471 tctttggacctcctggcactgggaaaact 499 |||||||||||||||||||||| |||||| Sbjct: 1670 tctttggacctcctggcactggcaaaact 1698
>gb|AC157954.2| Pan troglodytes BAC clone CH251-514O14 from chromosome unknown, complete sequence Length = 210950 Score = 50.1 bits (25), Expect = 0.008 Identities = 46/53 (86%) Strand = Plus / Plus Query: 474 ttggacctcctggcactgggaaaactatgcttgctaaagcagtagcaactgaa 526 ||||||| || |||||||| ||||||||||| |||||||| || || |||||| Sbjct: 105766 ttggacccccaggcactggtaaaactatgctagctaaagctgttgccactgaa 105818
>gb|AC087104.2|AC087104 Danio rerio clone 20A7, complete sequence Length = 76922 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Minus Query: 471 tctttggacctcctggcactgggaaaact 499 |||||||||||||||||||||| |||||| Sbjct: 14864 tctttggacctcctggcactggcaaaact 14836
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 50.1 bits (25), Expect = 0.008 Identities = 43/49 (87%) Strand = Plus / Minus Query: 450 agccttgcaagggaatattgctctttggacctcctggcactgggaaaac 498 |||||||||| || |||||||| ||||||||||| || || |||||||| Sbjct: 6516676 agccttgcaaaggtatattgctttttggacctccagggacagggaaaac 6516628
>gb|AY140458.1| Arabidopsis lyrata clone P1WA2-D03-KAR99-14 unknown protein gene, exons 8 through 13 and partial cds Length = 1562 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 470 ctctttggacctcctggcactgggaaaactatg 502 ||||||||||| ||||| ||||||||||||||| Sbjct: 494 ctctttggaccacctggtactgggaaaactatg 526
>gb|AY140457.1| Arabidopsis lyrata clone P1WA2-D03-KAR99-3 unknown protein gene, exons 8 through 13 and partial cds Length = 1562 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 470 ctctttggacctcctggcactgggaaaactatg 502 ||||||||||| ||||| ||||||||||||||| Sbjct: 494 ctctttggaccacctggtactgggaaaactatg 526
>dbj|AP003513.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0690H04 Length = 137319 Score = 50.1 bits (25), Expect = 0.008 Identities = 43/49 (87%) Strand = Plus / Minus Query: 450 agccttgcaagggaatattgctctttggacctcctggcactgggaaaac 498 |||||||||| || |||||||| ||||||||||| || || |||||||| Sbjct: 33052 agccttgcaaaggtatattgctttttggacctccagggacagggaaaac 33004
>dbj|AK063910.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-123-A05, full insert sequence Length = 1227 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 534 ctaacttcatcaatatatcaatgtcaagcatta 566 |||||||||| || ||||||||||||||||||| Sbjct: 1 ctaacttcattaacatatcaatgtcaagcatta 33
>gb|AC002402.1|AC002402 Human Chromosome 11 pac pDJ205d23, complete sequence Length = 130381 Score = 50.1 bits (25), Expect = 0.008 Identities = 46/53 (86%) Strand = Plus / Minus Query: 474 ttggacctcctggcactgggaaaactatgcttgctaaagcagtagcaactgaa 526 ||||||| || |||||||| ||||||||||| |||||||| || || |||||| Sbjct: 16815 ttggacccccaggcactggtaaaactatgctagctaaagctgttgccactgaa 16763
>ref|XM_508608.1| PREDICTED: Pan troglodytes similar to DNA helicase (LOC451384), mRNA Length = 3705 Score = 48.1 bits (24), Expect = 0.032 Identities = 24/24 (100%) Strand = Plus / Plus Query: 475 tggacctcctggcactgggaaaac 498 |||||||||||||||||||||||| Sbjct: 1110 tggacctcctggcactgggaaaac 1133
>gb|BC015666.2| Homo sapiens immunoglobulin mu binding protein 2, mRNA (cDNA clone IMAGE:4548704), partial cds Length = 2638 Score = 48.1 bits (24), Expect = 0.032 Identities = 24/24 (100%) Strand = Plus / Plus Query: 475 tggacctcctggcactgggaaaac 498 |||||||||||||||||||||||| Sbjct: 672 tggacctcctggcactgggaaaac 695
>gb|BC062312.1| Homo sapiens immunoglobulin mu binding protein 2, mRNA (cDNA clone IMAGE:4110524), partial cds Length = 2638 Score = 48.1 bits (24), Expect = 0.032 Identities = 24/24 (100%) Strand = Plus / Plus Query: 475 tggacctcctggcactgggaaaac 498 |||||||||||||||||||||||| Sbjct: 672 tggacctcctggcactgggaaaac 695
>ref|XM_861110.1| PREDICTED: Canis familiaris similar to Transitional endoplasmic reticulum ATPase (TER ATPase) (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP), transcript variant 13 (LOC481590), mRNA Length = 3371 Score = 48.1 bits (24), Expect = 0.032 Identities = 33/36 (91%) Strand = Plus / Plus Query: 460 gggaatattgctctttggacctcctggcactgggaa 495 |||||| ||||||| |||||||||||| |||||||| Sbjct: 985 gggaatcttgctctatggacctcctggaactgggaa 1020
>ref|XM_861098.1| PREDICTED: Canis familiaris similar to Transitional endoplasmic reticulum ATPase (TER ATPase) (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP), transcript variant 12 (LOC481590), mRNA Length = 3398 Score = 48.1 bits (24), Expect = 0.032 Identities = 33/36 (91%) Strand = Plus / Plus Query: 460 gggaatattgctctttggacctcctggcactgggaa 495 |||||| ||||||| |||||||||||| |||||||| Sbjct: 985 gggaatcttgctctatggacctcctggaactgggaa 1020
>ref|XM_538712.2| PREDICTED: Canis familiaris similar to Transitional endoplasmic reticulum ATPase (TER ATPase) (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP), transcript variant 1 (LOC481590), mRNA Length = 3377 Score = 48.1 bits (24), Expect = 0.032 Identities = 33/36 (91%) Strand = Plus / Plus Query: 460 gggaatattgctctttggacctcctggcactgggaa 495 |||||| ||||||| |||||||||||| |||||||| Sbjct: 985 gggaatcttgctctatggacctcctggaactgggaa 1020
>ref|XM_861074.1| PREDICTED: Canis familiaris similar to Transitional endoplasmic reticulum ATPase (TER ATPase) (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP), transcript variant 11 (LOC481590), mRNA Length = 2599 Score = 48.1 bits (24), Expect = 0.032 Identities = 33/36 (91%) Strand = Plus / Plus Query: 460 gggaatattgctctttggacctcctggcactgggaa 495 |||||| ||||||| |||||||||||| |||||||| Sbjct: 985 gggaatcttgctctatggacctcctggaactgggaa 1020
>ref|XM_861059.1| PREDICTED: Canis familiaris similar to Transitional endoplasmic reticulum ATPase (TER ATPase) (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP), transcript variant 10 (LOC481590), mRNA Length = 3227 Score = 48.1 bits (24), Expect = 0.032 Identities = 33/36 (91%) Strand = Plus / Plus Query: 460 gggaatattgctctttggacctcctggcactgggaa 495 |||||| ||||||| |||||||||||| |||||||| Sbjct: 853 gggaatcttgctctatggacctcctggaactgggaa 888
>ref|XM_861044.1| PREDICTED: Canis familiaris similar to Transitional endoplasmic reticulum ATPase (TER ATPase) (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP), transcript variant 9 (LOC481590), mRNA Length = 3302 Score = 48.1 bits (24), Expect = 0.032 Identities = 33/36 (91%) Strand = Plus / Plus Query: 460 gggaatattgctctttggacctcctggcactgggaa 495 |||||| ||||||| |||||||||||| |||||||| Sbjct: 985 gggaatcttgctctatggacctcctggaactgggaa 1020
>ref|XM_861028.1| PREDICTED: Canis familiaris similar to Transitional endoplasmic reticulum ATPase (TER ATPase) (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP), transcript variant 8 (LOC481590), mRNA Length = 2404 Score = 48.1 bits (24), Expect = 0.032 Identities = 33/36 (91%) Strand = Plus / Plus Query: 460 gggaatattgctctttggacctcctggcactgggaa 495 |||||| ||||||| |||||||||||| |||||||| Sbjct: 985 gggaatcttgctctatggacctcctggaactgggaa 1020
>ref|XM_861011.1| PREDICTED: Canis familiaris similar to Transitional endoplasmic reticulum ATPase (TER ATPase) (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP), transcript variant 7 (LOC481590), mRNA Length = 1639 Score = 48.1 bits (24), Expect = 0.032 Identities = 33/36 (91%) Strand = Plus / Plus Query: 460 gggaatattgctctttggacctcctggcactgggaa 495 |||||| ||||||| |||||||||||| |||||||| Sbjct: 985 gggaatcttgctctatggacctcctggaactgggaa 1020
>ref|XM_860998.1| PREDICTED: Canis familiaris similar to Transitional endoplasmic reticulum ATPase (TER ATPase) (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP), transcript variant 6 (LOC481590), mRNA Length = 1049 Score = 48.1 bits (24), Expect = 0.032 Identities = 33/36 (91%) Strand = Plus / Plus Query: 460 gggaatattgctctttggacctcctggcactgggaa 495 |||||| ||||||| |||||||||||| |||||||| Sbjct: 987 gggaatcttgctctatggacctcctggaactgggaa 1022
>ref|XM_860982.1| PREDICTED: Canis familiaris similar to Transitional endoplasmic reticulum ATPase (TER ATPase) (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP), transcript variant 5 (LOC481590), mRNA Length = 2660 Score = 48.1 bits (24), Expect = 0.032 Identities = 33/36 (91%) Strand = Plus / Plus Query: 460 gggaatattgctctttggacctcctggcactgggaa 495 |||||| ||||||| |||||||||||| |||||||| Sbjct: 985 gggaatcttgctctatggacctcctggaactgggaa 1020
>ref|XM_860961.1| PREDICTED: Canis familiaris similar to Transitional endoplasmic reticulum ATPase (TER ATPase) (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP), transcript variant 4 (LOC481590), mRNA Length = 3361 Score = 48.1 bits (24), Expect = 0.032 Identities = 33/36 (91%) Strand = Plus / Plus Query: 460 gggaatattgctctttggacctcctggcactgggaa 495 |||||| ||||||| |||||||||||| |||||||| Sbjct: 987 gggaatcttgctctatggacctcctggaactgggaa 1022
>ref|XM_847533.1| PREDICTED: Canis familiaris similar to Transitional endoplasmic reticulum ATPase (TER ATPase) (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP), transcript variant 3 (LOC481590), mRNA Length = 3359 Score = 48.1 bits (24), Expect = 0.032 Identities = 33/36 (91%) Strand = Plus / Plus Query: 460 gggaatattgctctttggacctcctggcactgggaa 495 |||||| ||||||| |||||||||||| |||||||| Sbjct: 985 gggaatcttgctctatggacctcctggaactgggaa 1020
>gb|BC025299.1| Homo sapiens immunoglobulin mu binding protein 2, mRNA (cDNA clone IMAGE:4890919), containing frame-shift errors Length = 2653 Score = 48.1 bits (24), Expect = 0.032 Identities = 24/24 (100%) Strand = Plus / Plus Query: 475 tggacctcctggcactgggaaaac 498 |||||||||||||||||||||||| Sbjct: 686 tggacctcctggcactgggaaaac 709
>gb|BC052278.1| Homo sapiens immunoglobulin mu binding protein 2, mRNA (cDNA clone IMAGE:4129446), partial cds Length = 2653 Score = 48.1 bits (24), Expect = 0.032 Identities = 24/24 (100%) Strand = Plus / Plus Query: 475 tggacctcctggcactgggaaaac 498 |||||||||||||||||||||||| Sbjct: 686 tggacctcctggcactgggaaaac 709
>ref|NM_002180.1| Homo sapiens immunoglobulin mu binding protein 2 (IGHMBP2), mRNA Length = 3892 Score = 48.1 bits (24), Expect = 0.032 Identities = 24/24 (100%) Strand = Plus / Plus Query: 475 tggacctcctggcactgggaaaac 498 |||||||||||||||||||||||| Sbjct: 688 tggacctcctggcactgggaaaac 711
>gb|L24544.1|HUMDNAHEL Homo sapiens DNA helicase gene, complete cds Length = 3888 Score = 48.1 bits (24), Expect = 0.032 Identities = 24/24 (100%) Strand = Plus / Plus Query: 475 tggacctcctggcactgggaaaac 498 |||||||||||||||||||||||| Sbjct: 674 tggacctcctggcactgggaaaac 697
>gb|BC080519.1| Homo sapiens immunoglobulin mu binding protein 2, mRNA (cDNA clone IMAGE:3509475) Length = 2653 Score = 48.1 bits (24), Expect = 0.032 Identities = 24/24 (100%) Strand = Plus / Plus Query: 475 tggacctcctggcactgggaaaac 498 |||||||||||||||||||||||| Sbjct: 686 tggacctcctggcactgggaaaac 709
>gb|BC000290.2| Homo sapiens immunoglobulin mu binding protein 2, mRNA (cDNA clone IMAGE:2819268), partial cds Length = 2620 Score = 48.1 bits (24), Expect = 0.032 Identities = 24/24 (100%) Strand = Plus / Plus Query: 475 tggacctcctggcactgggaaaac 498 |||||||||||||||||||||||| Sbjct: 654 tggacctcctggcactgggaaaac 677
>gb|BC105088.1| Homo sapiens immunoglobulin mu binding protein 2, mRNA (cDNA clone MGC:132748 IMAGE:8144091), complete cds Length = 3116 Score = 48.1 bits (24), Expect = 0.032 Identities = 24/24 (100%) Strand = Plus / Plus Query: 475 tggacctcctggcactgggaaaac 498 |||||||||||||||||||||||| Sbjct: 678 tggacctcctggcactgggaaaac 701
>gb|BC105090.1| Homo sapiens immunoglobulin mu binding protein 2, mRNA (cDNA clone MGC:132750 IMAGE:8144093), complete cds Length = 3116 Score = 48.1 bits (24), Expect = 0.032 Identities = 24/24 (100%) Strand = Plus / Plus Query: 475 tggacctcctggcactgggaaaac 498 |||||||||||||||||||||||| Sbjct: 678 tggacctcctggcactgggaaaac 701
>dbj|AK058549.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-017-C07, full insert sequence Length = 1466 Score = 48.1 bits (24), Expect = 0.032 Identities = 42/48 (87%) Strand = Plus / Plus Query: 451 gccttgcaagggaatattgctctttggacctcctggcactgggaaaac 498 ||||||||| || |||||||| ||||||||||| || || |||||||| Sbjct: 331 gccttgcaaaggtatattgctttttggacctccagggacagggaaaac 378
>dbj|AP000808.6| Homo sapiens genomic DNA, chromosome 11 clone:RP11-757G1, complete sequence Length = 175883 Score = 48.1 bits (24), Expect = 0.032 Identities = 24/24 (100%) Strand = Plus / Plus Query: 475 tggacctcctggcactgggaaaac 498 |||||||||||||||||||||||| Sbjct: 72447 tggacctcctggcactgggaaaac 72470
>dbj|AP003732.4| Homo sapiens genomic DNA, chromosome 11 clone:RP11-682D22, complete sequence Length = 193132 Score = 48.1 bits (24), Expect = 0.032 Identities = 24/24 (100%) Strand = Plus / Plus Query: 475 tggacctcctggcactgggaaaac 498 |||||||||||||||||||||||| Sbjct: 166831 tggacctcctggcactgggaaaac 166854
>gb|BC041808.1| Homo sapiens cDNA clone IMAGE:5267989, containing frame-shift errors Length = 3935 Score = 48.1 bits (24), Expect = 0.032 Identities = 24/24 (100%) Strand = Plus / Plus Query: 475 tggacctcctggcactgggaaaac 498 |||||||||||||||||||||||| Sbjct: 709 tggacctcctggcactgggaaaac 732
>dbj|AB208802.1| Homo sapiens mRNA for immunoglobulin mu binding protein 2 variant protein Length = 4789 Score = 48.1 bits (24), Expect = 0.032 Identities = 24/24 (100%) Strand = Plus / Plus Query: 475 tggacctcctggcactgggaaaac 498 |||||||||||||||||||||||| Sbjct: 683 tggacctcctggcactgggaaaac 706
>gb|L14754.1|HUMSMBP2X Human DNA-binding protein (SMBP2) mRNA, complete cds Length = 3892 Score = 48.1 bits (24), Expect = 0.032 Identities = 24/24 (100%) Strand = Plus / Plus Query: 475 tggacctcctggcactgggaaaac 498 |||||||||||||||||||||||| Sbjct: 688 tggacctcctggcactgggaaaac 711
>ref|XM_527740.1| PREDICTED: Pan troglodytes similar to fidgetin-like 1 (LOC472365), mRNA Length = 2265 Score = 46.1 bits (23), Expect = 0.12 Identities = 35/39 (89%) Strand = Plus / Plus Query: 461 ggaatattgctctttggacctcctggcactgggaaaact 499 ||||| ||||||||||| |||||||| ||||| |||||| Sbjct: 1546 ggaattttgctctttggtcctcctgggactggtaaaact 1584
>gb|BC051867.1| Homo sapiens fidgetin-like 1, mRNA (cDNA clone MGC:60239 IMAGE:6158883), complete cds Length = 3478 Score = 46.1 bits (23), Expect = 0.12 Identities = 35/39 (89%) Strand = Plus / Plus Query: 461 ggaatattgctctttggacctcctggcactgggaaaact 499 ||||| ||||||||||| |||||||| ||||| |||||| Sbjct: 1617 ggaattttgctctttggtcctcctgggactggtaaaact 1655
>ref|XM_455008.1| Kluyveromyces lactis NRRL Y-1140, KLLA0E23485g predicted mRNA Length = 1992 Score = 46.1 bits (23), Expect = 0.12 Identities = 41/47 (87%) Strand = Plus / Plus Query: 461 ggaatattgctctttggacctcctggcactgggaaaactatgcttgc 507 |||||||||||||| ||||| ||||| ||||| || |||||| |||| Sbjct: 1249 ggaatattgctcttcggaccacctggtactggtaagactatgattgc 1295
>ref|NM_022116.2| Homo sapiens fidgetin-like 1 (FIGNL1), mRNA Length = 3497 Score = 46.1 bits (23), Expect = 0.12 Identities = 35/39 (89%) Strand = Plus / Plus Query: 461 ggaatattgctctttggacctcctggcactgggaaaact 499 ||||| ||||||||||| |||||||| ||||| |||||| Sbjct: 1636 ggaattttgctctttggtcctcctgggactggtaaaact 1674
>gb|BC054143.1| Xenopus laevis xMSS1 protein, mRNA (cDNA clone MGC:64244 IMAGE:6872349), complete cds Length = 1492 Score = 46.1 bits (23), Expect = 0.12 Identities = 38/43 (88%) Strand = Plus / Plus Query: 457 caagggaatattgctctttggacctcctggcactgggaaaact 499 ||||||| || |||| |||||||||||||| ||||| |||||| Sbjct: 705 caagggagtactgctgtttggacctcctgggactggcaaaact 747
>gb|AC018705.10| Homo sapiens BAC clone RP11-95E2 from 7, complete sequence Length = 174970 Score = 46.1 bits (23), Expect = 0.12 Identities = 35/39 (89%) Strand = Plus / Minus Query: 461 ggaatattgctctttggacctcctggcactgggaaaact 499 ||||| ||||||||||| |||||||| ||||| |||||| Sbjct: 38497 ggaattttgctctttggtcctcctgggactggtaaaact 38459
>gb|BC027856.2| Homo sapiens fidgetin-like 1, mRNA (cDNA clone MGC:34206 IMAGE:5222008), complete cds Length = 3772 Score = 46.1 bits (23), Expect = 0.12 Identities = 35/39 (89%) Strand = Plus / Plus Query: 461 ggaatattgctctttggacctcctggcactgggaaaact 499 ||||| ||||||||||| |||||||| ||||| |||||| Sbjct: 2860 ggaattttgctctttggtcctcctgggactggtaaaact 2898
>gb|AC142290.1| Pan troglodytes BAC clone RP43-180M6 from 7, complete sequence Length = 234045 Score = 46.1 bits (23), Expect = 0.12 Identities = 35/39 (89%) Strand = Plus / Plus Query: 461 ggaatattgctctttggacctcctggcactgggaaaact 499 ||||| ||||||||||| |||||||| ||||| |||||| Sbjct: 169732 ggaattttgctctttggtcctcctgggactggtaaaact 169770
>gb|AF426837.1| Nicotiana tabacum Tobacco mosaic virus helicase domain-binding protein mRNA, partial cds Length = 1962 Score = 46.1 bits (23), Expect = 0.12 Identities = 41/47 (87%) Strand = Plus / Plus Query: 473 tttggacctcctggcactgggaaaactatgcttgctaaagcagtagc 519 |||||||| || || ||||| ||||| |||||||| ||||||||||| Sbjct: 913 tttggaccaccgggtactggaaaaaccatgcttgccaaagcagtagc 959
>emb|X80157.1|XLMSS1R X.laevis xMSS1 mRNA Length = 1537 Score = 46.1 bits (23), Expect = 0.12 Identities = 38/43 (88%) Strand = Plus / Plus Query: 457 caagggaatattgctctttggacctcctggcactgggaaaact 499 ||||||| || |||| |||||||||||||| ||||| |||||| Sbjct: 738 caagggagtactgctgtttggacctcctgggactggcaaaact 780
>emb|CR382125.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome E of strain NRRL Y-1140 of Kluyveromyces lactis Length = 2234072 Score = 46.1 bits (23), Expect = 0.12 Identities = 41/47 (87%) Strand = Plus / Minus Query: 461 ggaatattgctctttggacctcctggcactgggaaaactatgcttgc 507 |||||||||||||| ||||| ||||| ||||| || |||||| |||| Sbjct: 2082858 ggaatattgctcttcggaccacctggtactggtaagactatgattgc 2082812
>emb|AL834387.1|HSM805465 Homo sapiens mRNA; cDNA DKFZp434K142 (from clone DKFZp434K142) Length = 3076 Score = 46.1 bits (23), Expect = 0.12 Identities = 35/39 (89%) Strand = Plus / Plus Query: 461 ggaatattgctctttggacctcctggcactgggaaaact 499 ||||| ||||||||||| |||||||| ||||| |||||| Sbjct: 1217 ggaattttgctctttggtcctcctgggactggtaaaact 1255
>dbj|AK027537.1| Homo sapiens cDNA FLJ14631 fis, clone NT2RP2000660, weakly similar to SAP1 PROTEIN Length = 3588 Score = 46.1 bits (23), Expect = 0.12 Identities = 35/39 (89%) Strand = Plus / Plus Query: 461 ggaatattgctctttggacctcctggcactgggaaaact 499 ||||| ||||||||||| |||||||| ||||| |||||| Sbjct: 2083 ggaattttgctctttggtcctcctgggactggtaaaact 2121
>dbj|AK023411.1| Homo sapiens cDNA FLJ13349 fis, clone OVARC1002138, moderately similar to SAP1 PROTEIN Length = 1931 Score = 46.1 bits (23), Expect = 0.12 Identities = 35/39 (89%) Strand = Plus / Plus Query: 461 ggaatattgctctttggacctcctggcactgggaaaact 499 ||||| ||||||||||| |||||||| ||||| |||||| Sbjct: 85 ggaattttgctctttggtcctcctgggactggtaaaact 123
>dbj|AK023142.1| Homo sapiens cDNA FLJ13080 fis, clone NT2RP3002007, weakly similar to SAP1 PROTEIN Length = 2496 Score = 46.1 bits (23), Expect = 0.12 Identities = 35/39 (89%) Strand = Plus / Plus Query: 461 ggaatattgctctttggacctcctggcactgggaaaact 499 ||||| ||||||||||| |||||||| ||||| |||||| Sbjct: 1636 ggaattttgctctttggtcctcctgggactggtaaaact 1674
>gb|AE009780.1|AE009780 Pyrobaculum aerophilum strain IM2 section 35 of 201 of the complete genome Length = 10514 Score = 46.1 bits (23), Expect = 0.12 Identities = 35/39 (89%) Strand = Plus / Plus Query: 457 caagggaatattgctctttggacctcctggcactgggaa 495 |||||| ||||||||||| || ||||| ||||||||||| Sbjct: 8419 caagggcatattgctcttcgggcctcccggcactgggaa 8457
>ref|XM_515388.1| PREDICTED: Pan troglodytes LOC459133 (LOC459133), mRNA Length = 2449 Score = 44.1 bits (22), Expect = 0.49 Identities = 43/50 (86%) Strand = Plus / Plus Query: 470 ctctttggacctcctggcactgggaaaactatgcttgctaaagcagtagc 519 |||||||| || ||||| | |||||| || ||||| |||||||||||||| Sbjct: 1099 ctctttggtccacctgggaatgggaagacaatgctggctaaagcagtagc 1148
>emb|AL138693.45| Human DNA sequence from clone RP11-321C24 on chromosome 13 Contains a novel gene, the 5' end of the GTF2F2 gene for general transcription factor IIF, polypeptide 2, 30kDa, a novel gene similar to RIKEN cDNA 2210017A09 gene and a CpG island, complete sequence Length = 160582 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 476 ggacctcctggcactgggaaaa 497 |||||||||||||||||||||| Sbjct: 49322 ggacctcctggcactgggaaaa 49343
>emb|AJ246001.1|HSA246001 Homo sapiens mRNA for spastin protein (Spast gene) Length = 3263 Score = 44.1 bits (22), Expect = 0.49 Identities = 43/50 (86%) Strand = Plus / Plus Query: 470 ctctttggacctcctggcactgggaaaactatgcttgctaaagcagtagc 519 |||||||| || ||||| | |||||| || ||||| |||||||||||||| Sbjct: 1263 ctctttggtccacctgggaatgggaagacaatgctggctaaagcagtagc 1312
>dbj|AB029006.1| Homo sapiens mRNA for KIAA1083 protein, complete cds Length = 5120 Score = 44.1 bits (22), Expect = 0.49 Identities = 43/50 (86%) Strand = Plus / Plus Query: 470 ctctttggacctcctggcactgggaaaactatgcttgctaaagcagtagc 519 |||||||| || ||||| | |||||| || ||||| |||||||||||||| Sbjct: 1263 ctctttggtccacctgggaatgggaagacaatgctggctaaagcagtagc 1312
>ref|NM_014946.3| Homo sapiens spastin (SPAST), transcript variant 1, mRNA Length = 5221 Score = 44.1 bits (22), Expect = 0.49 Identities = 43/50 (86%) Strand = Plus / Plus Query: 470 ctctttggacctcctggcactgggaaaactatgcttgctaaagcagtagc 519 |||||||| || ||||| | |||||| || ||||| |||||||||||||| Sbjct: 1359 ctctttggtccacctgggaatgggaagacaatgctggctaaagcagtagc 1408
>ref|NM_199436.1| Homo sapiens spastin (SPAST), transcript variant 2, mRNA Length = 5125 Score = 44.1 bits (22), Expect = 0.49 Identities = 43/50 (86%) Strand = Plus / Plus Query: 470 ctctttggacctcctggcactgggaaaactatgcttgctaaagcagtagc 519 |||||||| || ||||| | |||||| || ||||| |||||||||||||| Sbjct: 1263 ctctttggtccacctgggaatgggaagacaatgctggctaaagcagtagc 1312
>ref|XM_693639.1| PREDICTED: Danio rerio similar to Potential helicase MOV-10 (Moloney leukemia virus 10 protein) (LOC570192), mRNA Length = 8065 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Plus Query: 473 tttggacctcctggcactgggaaaac 498 |||||||||||||||||||| ||||| Sbjct: 6490 tttggacctcctggcactggtaaaac 6515
>ref|XM_693610.1| PREDICTED: Danio rerio similar to Potential helicase MOV-10 (Moloney leukemia virus 10 protein) (LOC570166), mRNA Length = 2976 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Plus Query: 473 tttggacctcctggcactgggaaaac 498 |||||||||||||||||||| ||||| Sbjct: 1588 tttggacctcctggcactggtaaaac 1613
>ref|XM_678715.1| PREDICTED: Danio rerio similar to Potential helicase MOV-10 (Moloney leukemia virus 10 protein) (LOC556024), mRNA Length = 2362 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Plus Query: 473 tttggacctcctggcactgggaaaac 498 |||||||||||||||||||| ||||| Sbjct: 787 tttggacctcctggcactggtaaaac 812
>ref|XM_678613.1| PREDICTED: Danio rerio similar to Potential helicase MOV-10 (Moloney leukemia virus 10 protein) (LOC555950), mRNA Length = 2976 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Plus Query: 473 tttggacctcctggcactgggaaaac 498 |||||||||||||||||||| ||||| Sbjct: 1588 tttggacctcctggcactggtaaaac 1613
>dbj|AB179108.1| Macaca fascicularis testis cDNA clone: QtsA-12977, similar to human katanin p60 (ATPase-containing) subunit A 1 (KATNA1), mRNA, RefSeq: NM_007044.2 Length = 1718 Score = 44.1 bits (22), Expect = 0.49 Identities = 34/38 (89%) Strand = Plus / Plus Query: 482 cctggcactgggaaaactatgcttgctaaagcagtagc 519 |||||||||||||| || | ||||||||||||||||| Sbjct: 819 cctggcactgggaagacgctccttgctaaagcagtagc 856
>emb|BX248319.5| Zebrafish DNA sequence from clone CH211-218O3 in linkage group 8, complete sequence Length = 193173 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Minus Query: 473 tttggacctcctggcactgggaaaac 498 |||||||||||||||||||| ||||| Sbjct: 116653 tttggacctcctggcactggtaaaac 116628 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Minus Query: 473 tttggacctcctggcactgggaaaac 498 |||||||||||||||||||| ||||| Sbjct: 88281 tttggacctcctggcactggtaaaac 88256
>emb|BX323059.7| Zebrafish DNA sequence from clone DKEYP-38G6 in linkage group 8, complete sequence Length = 89925 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Minus Query: 473 tttggacctcctggcactgggaaaac 498 |||||||||||||||||||| ||||| Sbjct: 52006 tttggacctcctggcactggtaaaac 51981 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Minus Query: 473 tttggacctcctggcactgggaaaac 498 |||||||||||||||||||| ||||| Sbjct: 23578 tttggacctcctggcactggtaaaac 23553
>ref|NM_118938.1| Arabidopsis thaliana ATP binding / ATPase/ nucleoside-triphosphatase/ nucleotide binding AT4G28000 mRNA, complete cds Length = 2181 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 470 ctctttggacctcctggcactgggaaaactatg 502 ||||||||||| ||||| ||||| ||||||||| Sbjct: 1357 ctctttggaccacctggtactggaaaaactatg 1389
>gb|CP000108.1| Chlorobium chlorochromatii CaD3, complete genome Length = 2572079 Score = 42.1 bits (21), Expect = 1.9 Identities = 33/37 (89%) Strand = Plus / Plus Query: 474 ttggacctcctggcactgggaaaactatgcttgctaa 510 ||||||||||||| ||||| ||||| |||||||||| Sbjct: 8957 ttggacctcctggtactggtaaaaccttgcttgctaa 8993
>gb|CP000141.1| Carboxydothermus hydrogenoformans Z-2901, complete genome Length = 2401520 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 491 gggaaaactatgcttgctaaa 511 ||||||||||||||||||||| Sbjct: 1063941 gggaaaactatgcttgctaaa 1063961
>gb|AC133003.3| Oryza sativa chromosome 3 BAC OSJNBa0010D22 genomic sequence, complete sequence Length = 190055 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 475 tggacctcctggcactgggaa 495 ||||||||||||||||||||| Sbjct: 176927 tggacctcctggcactgggaa 176947
>gb|BT013464.1| Lycopersicon esculentum clone 132123R, mRNA sequence Length = 2129 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 479 cctcctggcactgggaaaactatgcttgc 507 |||||||||||||||||||| ||| |||| Sbjct: 1315 cctcctggcactgggaaaacaatggttgc 1343
>emb|AL161572.2|ATCHRIV68 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 68 Length = 199749 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 470 ctctttggacctcctggcactgggaaaactatg 502 ||||||||||| ||||| ||||| ||||||||| Sbjct: 43604 ctctttggaccacctggtactggaaaaactatg 43636
>emb|AL035524.1|ATT13J8 Arabidopsis thaliana DNA chromosome 4, BAC clone T13J8 (ESSAII project) Length = 83693 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 470 ctctttggacctcctggcactgggaaaactatg 502 ||||||||||| ||||| ||||| ||||||||| Sbjct: 38468 ctctttggaccacctggtactggaaaaactatg 38500
>gb|AY140456.1| Arabidopsis thaliana clone P1WA2-D03-6094 unknown protein gene, exons 8 through 13 and partial cds Length = 1573 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 470 ctctttggacctcctggcactgggaaaactatg 502 ||||||||||| ||||| ||||| ||||||||| Sbjct: 492 ctctttggaccacctggtactggaaaaactatg 524
>gb|AY140455.1| Arabidopsis thaliana clone P1WA2-D03-6092 unknown protein gene, exons 8 through 13 and partial cds Length = 1573 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 470 ctctttggacctcctggcactgggaaaactatg 502 ||||||||||| ||||| ||||| ||||||||| Sbjct: 493 ctctttggaccacctggtactggaaaaactatg 525
>gb|AY140454.1| Arabidopsis thaliana clone P1WA2-D03-6054 unknown protein gene, exons 8 through 13 and partial cds Length = 1573 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 470 ctctttggacctcctggcactgggaaaactatg 502 ||||||||||| ||||| ||||| ||||||||| Sbjct: 492 ctctttggaccacctggtactggaaaaactatg 524
>gb|AY140453.1| Arabidopsis thaliana clone P1WA2-D03-1248 unknown protein gene, exons 8 through 13 and partial cds Length = 1573 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 470 ctctttggacctcctggcactgggaaaactatg 502 ||||||||||| ||||| ||||| ||||||||| Sbjct: 492 ctctttggaccacctggtactggaaaaactatg 524
>gb|AY140452.1| Arabidopsis thaliana clone P1WA2-D03-1220 unknown protein gene, exons 8 through 13 and partial cds Length = 1573 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 470 ctctttggacctcctggcactgggaaaactatg 502 ||||||||||| ||||| ||||| ||||||||| Sbjct: 492 ctctttggaccacctggtactggaaaaactatg 524
>gb|AY140451.1| Arabidopsis thaliana clone P1WA2-D03-1084 unknown protein gene, exons 8 through 13 and partial cds Length = 1573 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 470 ctctttggacctcctggcactgggaaaactatg 502 ||||||||||| ||||| ||||| ||||||||| Sbjct: 492 ctctttggaccacctggtactggaaaaactatg 524
>gb|AY140450.1| Arabidopsis thaliana clone P1WA2-D03-1074 unknown protein gene, exons 8 through 13 and partial cds Length = 1573 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 470 ctctttggacctcctggcactgggaaaactatg 502 ||||||||||| ||||| ||||| ||||||||| Sbjct: 492 ctctttggaccacctggaactggaaaaactatg 524
>gb|AY140449.1| Arabidopsis thaliana clone P1WA2-D03-1006 unknown protein gene, exons 8 through 13 and partial cds Length = 1573 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 470 ctctttggacctcctggcactgggaaaactatg 502 ||||||||||| ||||| ||||| ||||||||| Sbjct: 493 ctctttggaccacctggtactggaaaaactatg 525
>gb|AY140448.1| Arabidopsis thaliana clone P1WA2-D03-996 unknown protein gene, exons 8 through 13 and partial cds Length = 1573 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 470 ctctttggacctcctggcactgggaaaactatg 502 ||||||||||| ||||| ||||| ||||||||| Sbjct: 492 ctctttggaccacctggtactggaaaaactatg 524
>gb|AY140447.1| Arabidopsis thaliana clone P1WA2-D03-970 unknown protein gene, exons 8 through 13 and partial cds Length = 1573 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 470 ctctttggacctcctggcactgggaaaactatg 502 ||||||||||| ||||| ||||| ||||||||| Sbjct: 492 ctctttggaccacctggtactggaaaaactatg 524
>dbj|AB025633.2| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MQM1 Length = 81365 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 373 tgtaaaggaaacattgaaggagttggtga 401 |||| ||||||| |||||||||||||||| Sbjct: 36815 tgtacaggaaaccttgaaggagttggtga 36787
>dbj|AK099721.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013088F16, full insert sequence Length = 2451 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 475 tggacctcctggcactgggaa 495 ||||||||||||||||||||| Sbjct: 705 tggacctcctggcactgggaa 725
>gb|BC088959.1| Xenopus laevis hypothetical LOC496357, mRNA (cDNA clone MGC:85105 IMAGE:6867821), complete cds Length = 1050 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 152 aataaagttgaaacctccaag 172 ||||||||||||||||||||| Sbjct: 433 aataaagttgaaacctccaag 453
>gb|AC115018.7| Mus musculus chromosome 3, clone RP24-221D2, complete sequence Length = 164720 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 377 aaggaaacattgaaggagttg 397 ||||||||||||||||||||| Sbjct: 150141 aaggaaacattgaaggagttg 150121
>ref|NM_125214.4| Arabidopsis thaliana RPT3; ATPase AT5G58290 (RPT3) mRNA, complete cds Length = 1518 Score = 40.1 bits (20), Expect = 7.7 Identities = 32/36 (88%) Strand = Plus / Plus Query: 467 ttgctctttggacctcctggcactgggaaaactatg 502 ||||||| |||||||||||| ||||| || |||||| Sbjct: 654 ttgctctatggacctcctggtactggaaagactatg 689
>ref|NM_122138.2| Arabidopsis thaliana nucleoside-triphosphatase/ nucleotide binding AT5G22330 mRNA, complete cds Length = 1730 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 475 tggacctcctggcactgggaaaac 498 |||||||||||| ||||||||||| Sbjct: 339 tggacctcctggaactgggaaaac 362
>ref|NM_001036854.1| Arabidopsis thaliana unknown protein AT5G23610 transcript variant AT5G23610.2 mRNA, complete cds Length = 1384 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 378 aggaaacattgaaggagttggtga 401 ||||||| |||||||||||||||| Sbjct: 965 aggaaaccttgaaggagttggtga 988
>ref|NM_122267.4| Arabidopsis thaliana unknown protein AT5G23610 transcript variant AT5G23610.1 mRNA, complete cds Length = 2105 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 378 aggaaacattgaaggagttggtga 401 ||||||| |||||||||||||||| Sbjct: 1686 aggaaaccttgaaggagttggtga 1709
>ref|NM_100425.2| Arabidopsis thaliana SDE3 (SILENCING DEFECTIVE) AT1G05460 (SDE3) mRNA, complete cds Length = 3491 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 475 tggacctcctggcactgggaaaac 498 |||||||||||| ||||||||||| Sbjct: 1417 tggacctcctggtactgggaaaac 1440
>gb|BT020373.1| Arabidopsis thaliana At5g58290 gene, complete cds Length = 1227 Score = 40.1 bits (20), Expect = 7.7 Identities = 32/36 (88%) Strand = Plus / Plus Query: 467 ttgctctttggacctcctggcactgggaaaactatg 502 ||||||| |||||||||||| ||||| || |||||| Sbjct: 577 ttgctctatggacctcctggtactggaaagactatg 612
>ref|NM_001034294.1| Bos taurus similar to Transitional endoplasmic reticulum ATPase (TER ATPase) (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP) (MGC128142), mRNA Length = 3258 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 468 tgctctttggacctcctggcactgggaa 495 |||||| |||||||||||| |||||||| Sbjct: 986 tgctctatggacctcctgggactgggaa 1013
>ref|NM_031586.1| Rattus norvegicus immunoglobulin mu binding protein 2 (Ighmbp2), mRNA Length = 3166 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 479 cctcctggcactgggaaaac 498 |||||||||||||||||||| Sbjct: 640 cctcctggcactgggaaaac 659
>ref|NM_025959.2| Mus musculus proteasome (prosome, macropain) 26S subunit, ATPase, 6 (Psmc6), mRNA Length = 1565 Score = 40.1 bits (20), Expect = 7.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 467 ttgctctttggacctcctggcactgggaaaac 498 ||||||| |||||| || |||||||||||||| Sbjct: 536 ttgctctatggaccgccaggcactgggaaaac 567
>ref|XM_586673.2| PREDICTED: Bos taurus similar to katanin p60 subunit A 1 (LOC509662), partial mRNA Length = 774 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 503 cttgctaaagcagtagcaac 522 |||||||||||||||||||| Sbjct: 658 cttgctaaagcagtagcaac 677 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 503 cttgctaaagcagtagcaac 522 |||||||||||||||||||| Sbjct: 43 cttgctaaagcagtagcaac 62
>ref|XM_423372.1| PREDICTED: Gallus gallus similar to vacuolar protein sorting protein 4a (LOC425637), partial mRNA Length = 565 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 468 tgctctttggacctcctggcactgggaa 495 ||||||| || ||||||||||||||||| Sbjct: 232 tgctcttcgggcctcctggcactgggaa 259
>gb|BT014984.1| Arabidopsis thaliana At5g23610 gene, complete cds Length = 1444 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 378 aggaaacattgaaggagttggtga 401 ||||||| |||||||||||||||| Sbjct: 1251 aggaaaccttgaaggagttggtga 1274
>gb|BC037099.1| Mus musculus proteasome (prosome, macropain) 26S subunit, ATPase, 6, mRNA (cDNA clone IMAGE:5351949), partial cds Length = 1329 Score = 40.1 bits (20), Expect = 7.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 467 ttgctctttggacctcctggcactgggaaaac 498 ||||||| |||||| || |||||||||||||| Sbjct: 533 ttgctctatggaccgccaggcactgggaaaac 564
>ref|XM_714227.1| Candida albicans SC5314 putative AAA family ATPase (CaO19_7558), mRNA Length = 2463 Score = 40.1 bits (20), Expect = 7.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 488 actgggaaaactatgcttgctaaagcagtagc 519 ||||||||||||||| | |||| ||||||||| Sbjct: 1744 actgggaaaactatgttagctagagcagtagc 1775
>gb|BT012705.1| Lycopersicon esculentum clone 113583F, mRNA sequence Length = 1608 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 488 actgggaaaactatgcttgc 507 |||||||||||||||||||| Sbjct: 668 actgggaaaactatgcttgc 687
>gb|AY815849.1| Schistosoma japonicum SJCHGC09453 protein mRNA, complete cds Length = 2882 Score = 40.1 bits (20), Expect = 7.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 461 ggaatattgctctttggacctcctggcactgg 492 |||||| |||| | |||||||||||||||||| Sbjct: 746 ggaatactgctttatggacctcctggcactgg 777
>gb|BC066215.1| Mus musculus immunoglobulin mu binding protein 2, mRNA (cDNA clone IMAGE:30429580), partial cds Length = 2767 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 479 cctcctggcactgggaaaac 498 |||||||||||||||||||| Sbjct: 807 cctcctggcactgggaaaac 826
>gb|BC025134.1| Mus musculus proteasome (prosome, macropain) 26S subunit, ATPase, 6, mRNA (cDNA clone IMAGE:2812662), partial cds Length = 1022 Score = 40.1 bits (20), Expect = 7.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 467 ttgctctttggacctcctggcactgggaaaac 498 ||||||| |||||| || |||||||||||||| Sbjct: 223 ttgctctatggaccgccaggcactgggaaaac 254
>gb|BT000923.1| Arabidopsis thaliana clone C105109 putative Ruv DNA-helicase (At5g22330) mRNA, complete cds Length = 1408 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 475 tggacctcctggcactgggaaaac 498 |||||||||||| ||||||||||| Sbjct: 216 tggacctcctggaactgggaaaac 239
>ref|XM_647974.1| Entamoeba histolytica HM-1:IMSS AAA family ATPase (95.t00012) partial mRNA Length = 1962 Score = 40.1 bits (20), Expect = 7.7 Identities = 41/48 (85%) Strand = Plus / Plus Query: 475 tggacctcctggcactgggaaaactatgcttgctaaagcagtagcaac 522 |||||||||||| || || || ||| | ||||| |||||||||||||| Sbjct: 1338 tggacctcctggaacaggaaagactcttcttgcaaaagcagtagcaac 1385
>gb|BC043044.1| Mus musculus proteasome (prosome, macropain) 26S subunit, ATPase, 6, mRNA (cDNA clone IMAGE:5701431), partial cds Length = 2190 Score = 40.1 bits (20), Expect = 7.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 467 ttgctctttggacctcctggcactgggaaaac 498 ||||||| |||||| || |||||||||||||| Sbjct: 514 ttgctctatggaccgccaggcactgggaaaac 545
>ref|XM_761406.1| Theileria parva strain Muguga chromosome 1 replication factor C subunit 2 (TP01_0978) partial mRNA Length = 1043 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 475 tggacctcctggcactgggaaaac 498 |||||||||||| ||||||||||| Sbjct: 147 tggacctcctggaactgggaaaac 170
>gb|AY223282.1| Schistosoma japonicum clone ZZD502 mRNA sequence Length = 1642 Score = 40.1 bits (20), Expect = 7.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 461 ggaatattgctctttggacctcctggcactgg 492 |||||| |||| | |||||||||||||||||| Sbjct: 706 ggaatactgctttatggacctcctggcactgg 737
>gb|BC057997.1| Mus musculus proteasome (prosome, macropain) 26S subunit, ATPase, 6, mRNA (cDNA clone IMAGE:5342248), partial cds Length = 2156 Score = 40.1 bits (20), Expect = 7.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 467 ttgctctttggacctcctggcactgggaaaac 498 ||||||| |||||| || |||||||||||||| Sbjct: 491 ttgctctatggaccgccaggcactgggaaaac 522
>ref|XM_661355.1| Cryptosporidium hominis TU502 AAA family ATPase (Chro.50096) partial mRNA Length = 1611 Score = 40.1 bits (20), Expect = 7.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 473 tttggacctcctggcactgggaaaactatgct 504 ||||| |||||||| ||||| ||||||||||| Sbjct: 883 tttggtcctcctggtactggaaaaactatgct 914
>gb|AC148655.4| Medicago truncatula clone mth2-61c11, complete sequence Length = 89884 Score = 40.1 bits (20), Expect = 7.7 Identities = 53/64 (82%) Strand = Plus / Minus Query: 465 tattgctctttggacctcctggcactgggaaaactatgcttgctaaagcagtagcaactg 524 ||||||| |||||||||||||| || || || || |||||||| || ||| | |||| || Sbjct: 79228 tattgctttttggacctcctggtacaggaaagacaatgcttgccaaggcaattgcaaatg 79169 Query: 525 aagc 528 |||| Sbjct: 79168 aagc 79165
>gb|BC099790.1| Rattus norvegicus immunoglobulin mu binding protein 2, mRNA (cDNA clone MGC:124598 IMAGE:7934952), complete cds Length = 3510 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 479 cctcctggcactgggaaaac 498 |||||||||||||||||||| Sbjct: 836 cctcctggcactgggaaaac 855
>gb|AY046031.1| Arabidopsis thaliana At5g22330 mRNA sequence Length = 1644 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 475 tggacctcctggcactgggaaaac 498 |||||||||||| ||||||||||| Sbjct: 328 tggacctcctggaactgggaaaac 351
>emb|Z54354.1|SPAC2G11 S.pombe chromosome I cosmid c2G11 Length = 36162 Score = 40.1 bits (20), Expect = 7.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 461 ggaatattgctctttggacctcctggcactgg 492 ||||||||||||| ||| |||||||| ||||| Sbjct: 12908 ggaatattgctctatggtcctcctggtactgg 12939
>emb|X81707.1|TGTHI12 T.gesneriana Thi1-2 mRNA for thionin class 1 Length = 609 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 501 tgcttgctaaagcagtagcaactg 524 |||||||| ||||||||||||||| Sbjct: 371 tgcttgcttaagcagtagcaactg 348
>gb|BC103125.1| Bos taurus similar to Transitional endoplasmic reticulum ATPase (TER ATPase) (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP), mRNA (cDNA clone MGC:128142 IMAGE:7988284), complete cds Length = 3258 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 468 tgctctttggacctcctggcactgggaa 495 |||||| |||||||||||| |||||||| Sbjct: 986 tgctctatggacctcctgggactgggaa 1013
>dbj|AK142456.1| Mus musculus 13 days embryo stomach cDNA, RIKEN full-length enriched library, clone:D530020F24 product:immunoglobulin mu binding protein 2, full insert sequence Length = 2609 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 479 cctcctggcactgggaaaac 498 |||||||||||||||||||| Sbjct: 668 cctcctggcactgggaaaac 687
>dbj|AK155899.1| Mus musculus B6-derived CD11 +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F730316H08 product:immunoglobulin mu binding protein 2, full insert sequence Length = 3710 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 479 cctcctggcactgggaaaac 498 |||||||||||||||||||| Sbjct: 861 cctcctggcactgggaaaac 880
>dbj|AK154805.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630107E17 product:immunoglobulin mu binding protein 2, full insert sequence Length = 3710 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 479 cctcctggcactgggaaaac 498 |||||||||||||||||||| Sbjct: 861 cctcctggcactgggaaaac 880
>dbj|AK153763.1| Mus musculus 3 days neonate thymus cDNA, RIKEN full-length enriched library, clone:A630078O04 product:immunoglobulin mu binding protein 2, full insert sequence Length = 3674 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 479 cctcctggcactgggaaaac 498 |||||||||||||||||||| Sbjct: 825 cctcctggcactgggaaaac 844
>gb|AY070466.1| Arabidopsis thaliana AT4g10340/F24G24_140 mRNA, complete cds Length = 1950 Score = 40.1 bits (20), Expect = 7.7 Identities = 32/36 (88%) Strand = Plus / Plus Query: 467 ttgctctttggacctcctggcactgggaaaactatg 502 ||||||| |||||||||||| ||||| || |||||| Sbjct: 1093 ttgctctatggacctcctggtactggaaagactatg 1128
>dbj|AK144728.1| Mus musculus lung RCB-0558 LLC cDNA, RIKEN full-length enriched library, clone:G730027J22 product:proteasome (prosome, macropain) 26S subunit, ATPase, 6, full insert sequence Length = 2182 Score = 40.1 bits (20), Expect = 7.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 467 ttgctctttggacctcctggcactgggaaaac 498 ||||||| |||||| || |||||||||||||| Sbjct: 532 ttgctctatggaccgccaggcactgggaaaac 563
>ref|NM_009212.1| Mus musculus immunoglobulin mu binding protein 2 (Ighmbp2), mRNA Length = 5459 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 479 cctcctggcactgggaaaac 498 |||||||||||||||||||| Sbjct: 760 cctcctggcactgggaaaac 779
>dbj|AK166961.1| Mus musculus blastocyst blastocyst cDNA, RIKEN full-length enriched library, clone:I1C0025K12 product:proteasome (prosome, macropain) 26S subunit, ATPase, 6, full insert sequence Length = 1549 Score = 40.1 bits (20), Expect = 7.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 467 ttgctctttggacctcctggcactgggaaaac 498 ||||||| |||||| || |||||||||||||| Sbjct: 520 ttgctctatggaccgccaggcactgggaaaac 551
>ref|XM_626215.1| Cryptosporidium parvum Iowa II katanin p60/fidgetin family with AAA ATpase (cgd5_2790), partial mRNA Length = 1614 Score = 40.1 bits (20), Expect = 7.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 473 tttggacctcctggcactgggaaaactatgct 504 ||||| |||||||| ||||| ||||||||||| Sbjct: 886 tttggtcctcctggtactggaaaaactatgct 917
>emb|CR390723.1| Gallus gallus finished cDNA, clone ChEST604d16 Length = 671 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 468 tgctctttggacctcctggcactgggaa 495 ||||||| || ||||||||||||||||| Sbjct: 211 tgctcttcgggcctcctggcactgggaa 238
>ref|NM_001018484.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPAC2G11.06), partial mRNA Length = 1299 Score = 40.1 bits (20), Expect = 7.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 461 ggaatattgctctttggacctcctggcactgg 492 ||||||||||||| ||| |||||||| ||||| Sbjct: 490 ggaatattgctctatggtcctcctggtactgg 521
>dbj|AK008996.1| Mus musculus adult male tongue cDNA, RIKEN full-length enriched library, clone:2300001E01 product:26S PROTEASE REGULATORY SUBUNIT S10B (PROTEASOME SUBUNIT P42) (P44) (CONSERVED ATPASE DOMAIN PROTEIN 44) (CADP44) homolog [Mus musculus], full insert sequence Length = 1917 Score = 40.1 bits (20), Expect = 7.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 467 ttgctctttggacctcctggcactgggaaaac 498 ||||||| |||||| || |||||||||||||| Sbjct: 279 ttgctctatggaccgccaggcactgggaaaac 310
>gb|BC111211.1| Bos taurus cDNA clone IMAGE:8058879, containing frame-shift errors Length = 1590 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 503 cttgctaaagcagtagcaac 522 |||||||||||||||||||| Sbjct: 804 cttgctaaagcagtagcaac 823
>dbj|AK012174.1| Mus musculus 10 days embryo whole body cDNA, RIKEN full-length enriched library, clone:2610528I24 product:26S PROTEASE REGULATORY SUBUNIT S10B (PROTEASOME SUBUNIT P42) (P44) (CONSERVED ATPASE DOMAIN PROTEIN 44) (CADP44) homolog [Mus musculus], full insert sequence Length = 1565 Score = 40.1 bits (20), Expect = 7.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 467 ttgctctttggacctcctggcactgggaaaac 498 ||||||| |||||| || |||||||||||||| Sbjct: 536 ttgctctatggaccgccaggcactgggaaaac 567
>gb|BC083142.1| Mus musculus immunoglobulin mu binding protein 2, mRNA (cDNA clone IMAGE:30107143) Length = 2629 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 479 cctcctggcactgggaaaac 498 |||||||||||||||||||| Sbjct: 669 cctcctggcactgggaaaac 688
>gb|BC052025.1| Mus musculus immunoglobulin mu binding protein 2, mRNA (cDNA clone IMAGE:6402634), containing frame-shift errors Length = 2701 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 479 cctcctggcactgggaaaac 498 |||||||||||||||||||| Sbjct: 736 cctcctggcactgggaaaac 755
>gb|BC060085.1| Mus musculus immunoglobulin mu binding protein 2, mRNA (cDNA clone IMAGE:6402634) Length = 2701 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 479 cctcctggcactgggaaaac 498 |||||||||||||||||||| Sbjct: 736 cctcctggcactgggaaaac 755
>dbj|AK014354.1| Mus musculus 17 days embryo head cDNA, RIKEN full-length enriched library, clone:3300001L20 product:26S PROTEASE REGULATORY SUBUNIT S10B (PROTEASOME SUBUNIT P42) (P44) (CONSERVED ATPASE DOMAIN PROTEIN 44) (CADP44) homolog [Mus musculus], full insert sequence Length = 1301 Score = 40.1 bits (20), Expect = 7.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 467 ttgctctttggacctcctggcactgggaaaac 498 ||||||| |||||| || |||||||||||||| Sbjct: 523 ttgctctatggaccgccaggcactgggaaaac 554
>gb|AF339908.1|AF339908 Arabidopsis thaliana RNA helicase SDE3 (SDE3) gene, complete cds Length = 4060 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 475 tggacctcctggcactgggaaaac 498 |||||||||||| ||||||||||| Sbjct: 2041 tggacctcctggtactgggaaaac 2064
>emb|BX829795.1|CNS0A1EZ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB37ZG03 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1432 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 378 aggaaacattgaaggagttggtga 401 ||||||| |||||||||||||||| Sbjct: 1251 aggaaaccttgaaggagttggtga 1274
>emb|BX831897.1|CNS0A143 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH38ZC02 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1670 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 475 tggacctcctggcactgggaaaac 498 |||||||||||| ||||||||||| Sbjct: 325 tggacctcctggaactgggaaaac 348
>emb|BX831143.1|CNS09ZD2 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS60ZH10 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1426 Score = 40.1 bits (20), Expect = 7.7 Identities = 32/36 (88%) Strand = Plus / Plus Query: 467 ttgctctttggacctcctggcactgggaaaactatg 502 ||||||| |||||||||||| ||||| || |||||| Sbjct: 626 ttgctctatggacctcctggtactggaaagactatg 661
>emb|BX831136.1|CNS09ZEE Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS60ZB05 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1414 Score = 40.1 bits (20), Expect = 7.7 Identities = 32/36 (88%) Strand = Plus / Plus Query: 467 ttgctctttggacctcctggcactgggaaaactatg 502 ||||||| |||||||||||| ||||| || |||||| Sbjct: 607 ttgctctatggacctcctggtactggaaagactatg 642
>emb|BX831437.1|CNS09ZEY Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS90ZD08 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1389 Score = 40.1 bits (20), Expect = 7.7 Identities = 32/36 (88%) Strand = Plus / Plus Query: 467 ttgctctttggacctcctggcactgggaaaactatg 502 ||||||| |||||||||||| ||||| || |||||| Sbjct: 682 ttgctctatggacctcctggtactggaaagactatg 717
>gb|AF199411.1|AF199411 Rattus norvegicus antifreeze-enhancer binding protein AEP mRNA, complete cds Length = 3166 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 479 cctcctggcactgggaaaac 498 |||||||||||||||||||| Sbjct: 640 cctcctggcactgggaaaac 659
>gb|AC113382.2| Homo sapiens chromosome 5 clone RP11-325L7, complete sequence Length = 166870 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 374 gtaaaggaaacattgaagga 393 |||||||||||||||||||| Sbjct: 112878 gtaaaggaaacattgaagga 112859
>ref|XM_214147.3| PREDICTED: Rattus norvegicus proteasome (prosome, macropain) 26S subunit, ATPase, 6 (predicted) (Psmc6_predicted), mRNA Length = 1713 Score = 40.1 bits (20), Expect = 7.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 467 ttgctctttggacctcctggcactgggaaaac 498 ||||||| |||||| || |||||||||||||| Sbjct: 553 ttgctctatggaccaccaggcactgggaaaac 584
>gb|AY084606.1| Arabidopsis thaliana clone 113109 mRNA, complete sequence Length = 1612 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 475 tggacctcctggcactgggaaaac 498 |||||||||||| ||||||||||| Sbjct: 339 tggacctcctggaactgggaaaac 362
>gb|AC005106.2|AC005106 Genomic sequence for Arabidopsis thaliana BAC T25N20 from chromosome I, complete sequence Length = 84203 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 475 tggacctcctggcactgggaaaac 498 |||||||||||| ||||||||||| Sbjct: 35269 tggacctcctggtactgggaaaac 35246
>dbj|AB019228.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MCK7 Length = 87090 Score = 40.1 bits (20), Expect = 7.7 Identities = 32/36 (88%) Strand = Plus / Plus Query: 467 ttgctctttggacctcctggcactgggaaaactatg 502 ||||||| |||||||||||| ||||| || |||||| Sbjct: 42964 ttgctctatggacctcctggtactggaaagactatg 42999
>dbj|AK117698.1| Arabidopsis thaliana At1g05460 mRNA for unknown protein, complete cds, clone: RAFL17-37-C03 Length = 3376 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 475 tggacctcctggcactgggaaaac 498 |||||||||||| ||||||||||| Sbjct: 1417 tggacctcctggtactgggaaaac 1440
>dbj|AB007651.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MWD9 Length = 85421 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 475 tggacctcctggcactgggaaaac 498 |||||||||||| ||||||||||| Sbjct: 32213 tggacctcctggaactgggaaaac 32190
>gb|AF123392.1|AF123392 Arabidopsis thaliana 26S proteasome AAA-ATPase subunit RPT3 (RPT3) mRNA, complete cds Length = 1301 Score = 40.1 bits (20), Expect = 7.7 Identities = 32/36 (88%) Strand = Plus / Plus Query: 467 ttgctctttggacctcctggcactgggaaaactatg 502 ||||||| |||||||||||| ||||| || |||||| Sbjct: 618 ttgctctatggacctcctggtactggaaagactatg 653
>emb|AJ970710.1| Candidatus Phytoplasma solani partial pseudogene, clone SR02G05 Length = 808 Score = 40.1 bits (20), Expect = 7.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 482 cctggcactgggaaaactatgcttgctaaagc 513 ||||||||||| |||||| | ||||||||||| Sbjct: 388 cctggcactggtaaaactttacttgctaaagc 419
>emb|AM180252.1| Lawsonia intracellularis PHE/MN1-00 Length = 1457619 Score = 40.1 bits (20), Expect = 7.7 Identities = 32/36 (88%) Strand = Plus / Minus Query: 476 ggacctcctggcactgggaaaactatgcttgctaaa 511 ||||||||||| | ||| || ||||||||||||||| Sbjct: 936711 ggacctcctggaagtggtaagactatgcttgctaaa 936676
>gb|BT020606.1| Arabidopsis thaliana At5g23610 gene, complete cds Length = 1083 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 378 aggaaacattgaaggagttggtga 401 ||||||| |||||||||||||||| Sbjct: 965 aggaaaccttgaaggagttggtga 988
>gb|AE016830.1| Enterococcus faecalis V583, complete genome Length = 3218031 Score = 40.1 bits (20), Expect = 7.7 Identities = 47/56 (83%) Strand = Plus / Plus Query: 476 ggacctcctggcactgggaaaactatgcttgctaaagcagtagcaactgaagcagg 531 |||||||| || ||||| ||||| | ||||||||||| |||||| ||||||||| Sbjct: 242669 ggacctccagggactggtaaaacgttacttgctaaagccgtagcaggtgaagcagg 242724
>emb|CT033586.1| Platynereis dumerilii EST IB0AAA17DA06EM1 Length = 885 Score = 40.1 bits (20), Expect = 7.7 Identities = 41/48 (85%) Strand = Plus / Plus Query: 457 caagggaatattgctctttggacctcctggcactgggaaaactatgct 504 ||||||| ||||| | | ||||||||||||||| || |||||| |||| Sbjct: 557 caagggagtattgttgtatggacctcctggcacaggtaaaactttgct 604
>emb|CT033264.1| Platynereis dumerilii EST IB0AAA23DB12EM1 Length = 944 Score = 40.1 bits (20), Expect = 7.7 Identities = 41/48 (85%) Strand = Plus / Plus Query: 457 caagggaatattgctctttggacctcctggcactgggaaaactatgct 504 ||||||| ||||| | | ||||||||||||||| || |||||| |||| Sbjct: 363 caagggagtattgttgtatggacctcctggcacaggtaaaactttgct 410
>emb|CT033184.1| Platynereis dumerilii EST IB0AAA25BD05EM1 Length = 900 Score = 40.1 bits (20), Expect = 7.7 Identities = 41/48 (85%) Strand = Plus / Plus Query: 457 caagggaatattgctctttggacctcctggcactgggaaaactatgct 504 ||||||| ||||| | | ||||||||||||||| || |||||| |||| Sbjct: 547 caagggagtattgttgtatggacctcctggcacaggtaaaactttgct 594
>tpd|BR000114.1| TPA: TPA_exp: Ciona intestinalis Ci-ZF(AN1/A20like)-2 mRNA for zinc finger protein, complete cds Length = 3418 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 475 tggacctcctggcactgggaaaac 498 |||||||||||| ||||||||||| Sbjct: 638 tggacctcctggaactgggaaaac 661
>emb|AL626765.22| Mouse DNA sequence from clone RP23-179N14 on chromosome 19, complete sequence Length = 206196 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 479 cctcctggcactgggaaaac 498 |||||||||||||||||||| Sbjct: 59617 cctcctggcactgggaaaac 59598
>gb|BC107950.1| Rattus norvegicus cDNA clone IMAGE:7446304, partial cds Length = 1305 Score = 40.1 bits (20), Expect = 7.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 467 ttgctctttggacctcctggcactgggaaaac 498 ||||||| |||||| || |||||||||||||| Sbjct: 487 ttgctctatggaccaccaggcactgggaaaac 518
>gb|L10075.1|MUSSSBIND Mouse DNA-binding protein (Smbp-2) mRNA, complete cds Length = 5459 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 479 cctcctggcactgggaaaac 498 |||||||||||||||||||| Sbjct: 760 cctcctggcactgggaaaac 779
>gb|L33456.1|YSPSUPPRO Schizosaccharomyces pombe supressor protein, complete cds Length = 1481 Score = 40.1 bits (20), Expect = 7.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 461 ggaatattgctctttggacctcctggcactgg 492 ||||||||||||| ||| |||||||| ||||| Sbjct: 597 ggaatattgctctatggtcctcctggtactgg 628
>dbj|D85464.1| Halocynthia roretzi mRNA for homolog of DPP subclass BMP, complete cds Length = 3995 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 287 aacgaatttgagaaaaggcttttg 310 |||||||||||||||| ||||||| Sbjct: 292 aacgaatttgagaaaaagcttttg 315 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,628,351 Number of Sequences: 3902068 Number of extensions: 4628351 Number of successful extensions: 82901 Number of sequences better than 10.0: 224 Number of HSP's better than 10.0 without gapping: 226 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 82325 Number of HSP's gapped (non-prelim): 570 length of query: 566 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 543 effective length of database: 17,143,297,704 effective search space: 9308810653272 effective search space used: 9308810653272 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)