ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags17p11 |
|---|---|
| Clone Library Name | barley_pub |
>AGO1_ARATH (O04379) Argonaute protein| Length = 1048 Score = 107 bits (268), Expect = 2e-23 Identities = 69/211 (32%), Positives = 118/211 (55%), Gaps = 7/211 (3%) Frame = +1 Query: 7 SLRVIDIILRQHSAKQGCLLVRQSFFHNNPSNFVDLGGGVMGCRGFHSSFRATQSGLSLN 186 +L+V+DI+LR+ + + V +SF+ + LG G+ RGF+ S R TQ GLSLN Sbjct: 317 ALQVLDIVLRELPTSR-YIPVGRSFYSPDIGKKQSLGDGLESWRGFYQSIRPTQMGLSLN 375 Query: 187 IDVSTTMIVKPGPVVDFL--LANQKVDHP--NKIDWPKAKRALKNLRIKTSPANT---EY 345 ID+S+T ++ PV+ F+ L N+ + + D K K+AL+ ++++ + +Y Sbjct: 376 IDMSSTAFIEANPVIQFVCDLLNRDISSRPLSDADRVKIKKALRGVKVEVTHRGNMRRKY 435 Query: 346 KIVGLSDRNCYEQMFSLKQRNGGNGEPEAIEISVYDYFVKNRGIELRYSGDFPCINVGKP 525 +I GL+ E F + +RN + SV +YF + G ++++ PC+ VG Sbjct: 436 RISGLTAVATRELTFPVDERN--------TQKSVVEYFHETYGFRIQHT-QLPCLQVGNS 486 Query: 526 KRPTYFPIELCQLVPLQRYTKSLSTLQRSSL 618 RP Y P+E+C++V QRY+K L+ Q ++L Sbjct: 487 NRPNYLPMEVCKIVEGQRYSKRLNERQITAL 517
>PINH_ARATH (Q9XGW1) PINHEAD protein (ZWILLE protein)| Length = 988 Score = 105 bits (261), Expect = 1e-22 Identities = 70/211 (33%), Positives = 119/211 (56%), Gaps = 7/211 (3%) Frame = +1 Query: 7 SLRVIDIILRQHSAKQGCLLVRQSFFHNNPSNFVDLGGGVMGCRGFHSSFRATQSGLSLN 186 +++++DI+LR+ S K+ C + R SFF + LG G+ GF+ S R TQ GLSLN Sbjct: 267 AVQILDIVLRELSVKRFCPVGR-SFFSPDIKTPQRLGEGLESWCGFYQSIRPTQMGLSLN 325 Query: 187 IDVSTTMIVKPGPVVDF---LLANQKVDHP-NKIDWPKAKRALKNLRIK-TSPANT--EY 345 ID+++ ++P PV++F LL + P + D K K+ L+ ++++ T AN +Y Sbjct: 326 IDMASAAFIEPLPVIEFVAQLLGKDVLSKPLSDSDRVKIKKGLRGVKVEVTHRANVRRKY 385 Query: 346 KIVGLSDRNCYEQMFSLKQRNGGNGEPEAIEISVYDYFVKNRGIELRYSGDFPCINVGKP 525 ++ GL+ + E MF + + SV +YF + G ++++ PC+ VG Sbjct: 386 RVAGLTTQPTRELMFPV--------DENCTMKSVIEYFQEMYGFTIQHT-HLPCLQVGNQ 436 Query: 526 KRPTYFPIELCQLVPLQRYTKSLSTLQRSSL 618 K+ +Y P+E C++V QRYTK L+ Q ++L Sbjct: 437 KKASYLPMEACKIVEGQRYTKRLNEKQITAL 467
>AGOL_ARATH (Q9SJK3) Argonaute-like protein At2g27880| Length = 997 Score = 95.5 bits (236), Expect = 1e-19 Identities = 70/215 (32%), Positives = 105/215 (48%), Gaps = 11/215 (5%) Frame = +1 Query: 7 SLRVIDIILRQHSAKQGCLLVRQSFFHNNPSNFV-----DLGGGVMGCRGFHSSFRATQS 171 +++V+D++LR + + V +SFFH + +LG G+ RG+ S R TQ Sbjct: 284 TIQVLDVVLRDKPSND-YVSVGRSFFHTSLGKDARDGRGELGDGIEYWRGYFQSLRLTQM 342 Query: 172 GLSLNIDVSTTMIVKPGPVVDFLLANQKVDHPNK----IDWPKAKRALKNLRIKTSPAN- 336 GLSLNIDVS +P V DF+ + N+ D K K+ L+ L++K N Sbjct: 343 GLSLNIDVSARSFYEPIVVTDFISKFLNIRDLNRPLRDSDRLKVKKVLRTLKVKLLHWNC 402 Query: 337 -TEYKIVGLSDRNCYEQMFSLKQRNGGNGEPEAIEISVYDYFVKNRGIELRYSGDFPCIN 513 KI G+S E F+L+ ++ E +V YF + ++Y P I Sbjct: 403 TKSAKISGISSLPIRELRFTLEDKS---------EKTVVQYFAEKYNYRVKYQA-LPAIQ 452 Query: 514 VGKPKRPTYFPIELCQLVPLQRYTKSLSTLQRSSL 618 G RP Y P+ELCQ+ QRYTK L+ Q ++L Sbjct: 453 TGSDTRPVYLPMELCQIDEGQRYTKRLNEKQVTAL 487
>I2C4_HUMAN (Q9HCK5) Eukaryotic translation initiation factor 2C 4 (eIF2C 4)| (eIF-2C 4) (Argonaute-4) Length = 861 Score = 92.4 bits (228), Expect = 9e-19 Identities = 61/214 (28%), Positives = 106/214 (49%), Gaps = 10/214 (4%) Frame = +1 Query: 7 SLRVIDIILRQHSAKQGCLLVRQSFFHNNPSNFVDLGGGVMGCRGFHSSFRATQSGLSLN 186 S++ +D+I R H V +SFF + LGGG GFH S R + LN Sbjct: 148 SVQALDVITR-HLPSMRYTPVGRSFFSPPEGYYHPLGGGREVWFGFHQSVRPAMWNMMLN 206 Query: 187 IDVSTTMIVKPGPVVDFLLANQKVDHPNKIDWP-------KAKRALKNLRIKTS---PAN 336 IDVS T + P+++F+ + + N+ P K + ++ L+++ + Sbjct: 207 IDVSATAFYRAQPIIEFMCEVLDIQNINEQTKPLTDSQRVKFTKEIRGLKVEVTHCGQMK 266 Query: 337 TEYKIVGLSDRNCYEQMFSLKQRNGGNGEPEAIEISVYDYFVKNRGIELRYSGDFPCINV 516 +Y++ ++ R Q F L+ NG +A+E +V YF + ++L+Y PC+ V Sbjct: 267 RKYRVCNVTRRPASHQTFPLQLENG-----QAMECTVAQYFKQKYSLQLKYP-HLPCLQV 320 Query: 517 GKPKRPTYFPIELCQLVPLQRYTKSLSTLQRSSL 618 G+ ++ TY P+E+C +V QR K L+ Q S++ Sbjct: 321 GQEQKHTYLPLEVCNIVAGQRCIKKLTDNQTSTM 354
>I2C1_HUMAN (Q9UL18) Eukaryotic translation initiation factor 2C 1 (eIF2C 1)| (eIF-2C 1) (Argonaute-1) (Putative RNA-binding protein Q99) Length = 857 Score = 90.5 bits (223), Expect = 4e-18 Identities = 63/216 (29%), Positives = 107/216 (49%), Gaps = 12/216 (5%) Frame = +1 Query: 7 SLRVIDIILRQHSAKQGCLLVRQSFFHNNPSNFVDLGGGVMGCRGFHSSFRATQSGLSLN 186 S++ +D+ +R H A V +SFF + LGGG GFH S R + LN Sbjct: 156 SVQALDVAMR-HLASMRYTPVGRSFFSPPEGYYHPLGGGREVWFGFHQSVRPAMWKMMLN 214 Query: 187 IDVSTTMIVKPGPVVDFLLANQKVDHPNKIDWPKA---------KRALKNLRIKTS---P 330 IDVS T K PV++F+ + +D N + PK + +K L+++ + Sbjct: 215 IDVSATAFYKAQPVIEFMC--EVLDIRNIDEQPKPLTDSQRVRFTKEIKGLKVEVTHCGQ 272 Query: 331 ANTEYKIVGLSDRNCYEQMFSLKQRNGGNGEPEAIEISVYDYFVKNRGIELRYSGDFPCI 510 +Y++ ++ R Q F L+ +G + +E +V YF + ++L+Y PC+ Sbjct: 273 MKRKYRVCNVTRRPASHQTFPLQLESG-----QTVECTVAQYFKQKYNLQLKYP-HLPCL 326 Query: 511 NVGKPKRPTYFPIELCQLVPLQRYTKSLSTLQRSSL 618 VG+ ++ TY P+E+C +V QR K L+ Q S++ Sbjct: 327 QVGQEQKHTYLPLEVCNIVAGQRCIKKLTDNQTSTM 362
>I2C4_MOUSE (Q8CJF8) Eukaryotic translation initiation factor 2C 4 (eIF2C 4)| (eIF-2C 4) (Argonaute-4) (Piwi/argonaute family protein meIF2C4) Length = 861 Score = 90.5 bits (223), Expect = 4e-18 Identities = 60/214 (28%), Positives = 106/214 (49%), Gaps = 10/214 (4%) Frame = +1 Query: 7 SLRVIDIILRQHSAKQGCLLVRQSFFHNNPSNFVDLGGGVMGCRGFHSSFRATQSGLSLN 186 S++ +D+I R H V +SFF + LGGG GFH S R + LN Sbjct: 148 SVQALDVITR-HLPSMRYTPVGRSFFSPPEGYYHPLGGGREVWFGFHQSVRPAMWNMMLN 206 Query: 187 IDVSTTMIVKPGPVVDFLLANQKVDHPNKIDWP-------KAKRALKNLRIKTS---PAN 336 IDVS T + P+++F+ + + N+ P K + ++ L+++ + Sbjct: 207 IDVSATAFYRAQPIIEFMCEVLDIQNINEQTKPLTDSQRVKFTKEIRGLKVEVTHCGQMK 266 Query: 337 TEYKIVGLSDRNCYEQMFSLKQRNGGNGEPEAIEISVYDYFVKNRGIELRYSGDFPCINV 516 +Y++ ++ R Q F L+ NG +A+E +V YF + ++L++ PC+ V Sbjct: 267 RKYRVCNVTRRPASHQTFPLQLENG-----QAMECTVAQYFKQKYSLQLKHP-HLPCLQV 320 Query: 517 GKPKRPTYFPIELCQLVPLQRYTKSLSTLQRSSL 618 G+ ++ TY P+E+C +V QR K L+ Q S++ Sbjct: 321 GQEQKHTYLPLEVCNIVAGQRCIKKLTDNQTSTM 354
>I2C3_MOUSE (Q8CJF9) Eukaryotic translation initiation factor 2C 3 (eIF2C 3)| (eIF-2C 3) (Argonaute-3) (Piwi/argonaute family protein meIF2C3) Length = 860 Score = 88.6 bits (218), Expect = 1e-17 Identities = 62/213 (29%), Positives = 103/213 (48%), Gaps = 10/213 (4%) Frame = +1 Query: 10 LRVIDIILRQHSAKQGCLLVRQSFFHNNPSNFVDLGGGVMGCRGFHSSFRATQSGLSLNI 189 + +D++LR H V +SFF LGGG GFH S R + LNI Sbjct: 160 VHAVDVVLR-HLPSMKYTPVGRSFFSAPEGYDHPLGGGREVWFGFHQSVRPAMWKMMLNI 218 Query: 190 DVSTTMIVKPGPVVDFLLANQKVDHPNKIDWP-------KAKRALKNLRIKTSPANT--- 339 DVS T K PV+ F+ + + ++ P K + +K L+++ + T Sbjct: 219 DVSATAFYKAQPVIQFMCEVLDIHNIDEQPRPLTDSHRVKFTKEIKGLKVEVTHCGTMRR 278 Query: 340 EYKIVGLSDRNCYEQMFSLKQRNGGNGEPEAIEISVYDYFVKNRGIELRYSGDFPCINVG 519 +Y++ ++ R Q F L+ NG + +E +V YF + ++L+Y PC+ VG Sbjct: 279 KYRVCNVTRRPASHQTFPLQLENG-----QTVERTVAQYFREKYTLQLKYP-HLPCLQVG 332 Query: 520 KPKRPTYFPIELCQLVPLQRYTKSLSTLQRSSL 618 + ++ TY P+E+C +V QR K L+ Q S++ Sbjct: 333 QEQKHTYLPLEVCNIVAGQRCIKKLTDNQTSTM 365
>I2C3_HUMAN (Q9H9G7) Eukaryotic translation initiation factor 2C 3 (eIF2C 3)| (eIF-2C 3) (Argonaute-3) Length = 860 Score = 88.6 bits (218), Expect = 1e-17 Identities = 62/213 (29%), Positives = 103/213 (48%), Gaps = 10/213 (4%) Frame = +1 Query: 10 LRVIDIILRQHSAKQGCLLVRQSFFHNNPSNFVDLGGGVMGCRGFHSSFRATQSGLSLNI 189 + +D++LR H V +SFF LGGG GFH S R + LNI Sbjct: 160 VHAVDVVLR-HLPSMKYTPVGRSFFSAPEGYDHPLGGGREVWFGFHQSVRPAMWKMMLNI 218 Query: 190 DVSTTMIVKPGPVVDFLLANQKVDHPNKIDWP-------KAKRALKNLRIKTSPANT--- 339 DVS T K PV+ F+ + + ++ P K + +K L+++ + T Sbjct: 219 DVSATAFYKAQPVIQFMCEVLDIHNIDEQPRPLTDSHRVKFTKEIKGLKVEVTHCGTMRR 278 Query: 340 EYKIVGLSDRNCYEQMFSLKQRNGGNGEPEAIEISVYDYFVKNRGIELRYSGDFPCINVG 519 +Y++ ++ R Q F L+ NG + +E +V YF + ++L+Y PC+ VG Sbjct: 279 KYRVCNVTRRPASHQTFPLQLENG-----QTVERTVAQYFREKYTLQLKYP-HLPCLQVG 332 Query: 520 KPKRPTYFPIELCQLVPLQRYTKSLSTLQRSSL 618 + ++ TY P+E+C +V QR K L+ Q S++ Sbjct: 333 QEQKHTYLPLEVCNIVAGQRCIKKLTDNQTSTM 365
>I2C1_MOUSE (Q8CJG1) Eukaryotic translation initiation factor 2C 1 (eIF2C 1)| (eIF-2C 1) (Argonaute-1) (Piwi/argonaute family protein meIF2C1) Length = 857 Score = 88.6 bits (218), Expect = 1e-17 Identities = 62/216 (28%), Positives = 107/216 (49%), Gaps = 12/216 (5%) Frame = +1 Query: 7 SLRVIDIILRQHSAKQGCLLVRQSFFHNNPSNFVDLGGGVMGCRGFHSSFRATQSGLSLN 186 S++ +D+ +R H A V +SFF + LGGG GFH S R + LN Sbjct: 156 SVQALDVAMR-HLASMRYTPVGRSFFSPPEGYYHPLGGGREVWFGFHQSVRPAMWKMMLN 214 Query: 187 IDVSTTMIVKPGPVVDFLLANQKVDHPNKIDWPKA---------KRALKNLRIKTS---P 330 IDVS T K PV++F+ + +D N + PK + +K L+++ + Sbjct: 215 IDVSATAFYKAQPVIEFMC--EVLDIRNIDEQPKPLTDSQRVRFTKEIKGLKVEVTHCGQ 272 Query: 331 ANTEYKIVGLSDRNCYEQMFSLKQRNGGNGEPEAIEISVYDYFVKNRGIELRYSGDFPCI 510 +Y++ ++ R Q F L+ +G + +E +V +F + ++L+Y PC+ Sbjct: 273 MKRKYRVCNVTRRPASHQTFPLQLESG-----QTVECTVAQHFKQKYNLQLKYP-HLPCL 326 Query: 511 NVGKPKRPTYFPIELCQLVPLQRYTKSLSTLQRSSL 618 VG+ ++ TY P+E+C +V QR K L+ Q S++ Sbjct: 327 QVGQEQKHTYLPLEVCNIVAGQRCIKKLTDNQTSTM 362
>I2C2_HUMAN (Q9UKV8) Eukaryotic translation initiation factor 2C 2 (eIF2C 2)| (eIF-2C 2) (Argonaute-2) (Slicer protein) (PAZ Piwi domain protein) (PPD) Length = 851 Score = 87.8 bits (216), Expect = 2e-17 Identities = 63/214 (29%), Positives = 108/214 (50%), Gaps = 10/214 (4%) Frame = +1 Query: 7 SLRVIDIILRQHSAKQGCLLVRQSFFHNNPSNFVDLGGGVMGCRGFHSSFRATQSGLSLN 186 +++ +D+++R H V +SFF + LGGG GFH S R + + LN Sbjct: 150 TIQALDVVMR-HLPSMRYTPVGRSFFTASEGCSNPLGGGREVWFGFHQSVRPSLWKMMLN 208 Query: 187 IDVSTTMIVKPGPVVDF---LLANQKVDHPNK--IDWPKAK--RALKNLRIKTS---PAN 336 IDVS T K PV++F +L + ++ K D + K + +K L+++ + Sbjct: 209 IDVSATAFYKAQPVIEFVCEVLDFKSIEEQQKPLTDSQRVKFTKEIKGLKVEITHCGQMK 268 Query: 337 TEYKIVGLSDRNCYEQMFSLKQRNGGNGEPEAIEISVYDYFVKNRGIELRYSGDFPCINV 516 +Y++ ++ R Q F L+Q +G + +E +V YF + LRY PC+ V Sbjct: 269 RKYRVCNVTRRPASHQTFPLQQESG-----QTVECTVAQYFKDRHKLVLRYP-HLPCLQV 322 Query: 517 GKPKRPTYFPIELCQLVPLQRYTKSLSTLQRSSL 618 G+ ++ TY P+E+C +V QR K L+ Q S++ Sbjct: 323 GQEQKHTYLPLEVCNIVAGQRCIKKLTDNQTSTM 356
>I2C2_RABIT (O77503) Eukaryotic translation initiation factor 2C 2 (eIF2C 2)| (eIF-2C 2) (Argonaute-2) (Fragment) Length = 840 Score = 87.8 bits (216), Expect = 2e-17 Identities = 63/214 (29%), Positives = 108/214 (50%), Gaps = 10/214 (4%) Frame = +1 Query: 7 SLRVIDIILRQHSAKQGCLLVRQSFFHNNPSNFVDLGGGVMGCRGFHSSFRATQSGLSLN 186 +++ +D+++R H V +SFF + LGGG GFH S R + + LN Sbjct: 139 TIQALDVVMR-HLPSMRYTPVGRSFFTASEGCSNPLGGGREVWFGFHQSVRPSLWKMMLN 197 Query: 187 IDVSTTMIVKPGPVVDF---LLANQKVDHPNK--IDWPKAK--RALKNLRIKTS---PAN 336 IDVS T K PV++F +L + ++ K D + K + +K L+++ + Sbjct: 198 IDVSATAFYKAQPVIEFVCEVLDFKSIEEQQKPLTDSQRVKFTKEIKGLKVEITHCGQMK 257 Query: 337 TEYKIVGLSDRNCYEQMFSLKQRNGGNGEPEAIEISVYDYFVKNRGIELRYSGDFPCINV 516 +Y++ ++ R Q F L+Q +G + +E +V YF + LRY PC+ V Sbjct: 258 RKYRVCNVTRRPASHQTFPLQQESG-----QTVECTVAQYFKDRHKLVLRYP-HLPCLQV 311 Query: 517 GKPKRPTYFPIELCQLVPLQRYTKSLSTLQRSSL 618 G+ ++ TY P+E+C +V QR K L+ Q S++ Sbjct: 312 GQEQKHTYLPLEVCNIVAGQRCIKKLTDNQTSTM 345
>I2C2_RAT (Q9QZ81) Eukaryotic translation initiation factor 2C 2 (eIF2C 2)| (eIF-2C 2) (Argonaute-2) (Golgi ER protein 95 kDa) (GERp95) Length = 860 Score = 87.8 bits (216), Expect = 2e-17 Identities = 63/214 (29%), Positives = 108/214 (50%), Gaps = 10/214 (4%) Frame = +1 Query: 7 SLRVIDIILRQHSAKQGCLLVRQSFFHNNPSNFVDLGGGVMGCRGFHSSFRATQSGLSLN 186 +++ +D+++R H V +SFF + LGGG GFH S R + + LN Sbjct: 159 TIQALDVVMR-HLPSMRYTPVGRSFFTASEGCSNPLGGGREVWFGFHQSVRPSLWKMMLN 217 Query: 187 IDVSTTMIVKPGPVVDF---LLANQKVDHPNK--IDWPKAK--RALKNLRIKTS---PAN 336 IDVS T K PV++F +L + ++ K D + K + +K L+++ + Sbjct: 218 IDVSATAFYKAQPVIEFVCEVLDFKSIEEQQKPLTDSQRVKFTKEIKGLKVEITHCGQMK 277 Query: 337 TEYKIVGLSDRNCYEQMFSLKQRNGGNGEPEAIEISVYDYFVKNRGIELRYSGDFPCINV 516 +Y++ ++ R Q F L+Q +G + +E +V YF + LRY PC+ V Sbjct: 278 RKYRVCNVTRRPASHQTFPLQQESG-----QTVECTVAQYFKDRHKLVLRYP-HLPCLQV 331 Query: 517 GKPKRPTYFPIELCQLVPLQRYTKSLSTLQRSSL 618 G+ ++ TY P+E+C +V QR K L+ Q S++ Sbjct: 332 GQEQKHTYLPLEVCNIVAGQRCIKKLTDNQTSTM 365
>I2C2_MOUSE (Q8CJG0) Eukaryotic translation initiation factor 2C 2 (eIF2C 2)| (eIF-2C 2) (Argonaute-2) (Slicer protein) (Piwi/argonaute family protein meIF2C2) Length = 860 Score = 87.8 bits (216), Expect = 2e-17 Identities = 63/214 (29%), Positives = 108/214 (50%), Gaps = 10/214 (4%) Frame = +1 Query: 7 SLRVIDIILRQHSAKQGCLLVRQSFFHNNPSNFVDLGGGVMGCRGFHSSFRATQSGLSLN 186 +++ +D+++R H V +SFF + LGGG GFH S R + + LN Sbjct: 159 TIQALDVVMR-HLPSMRYTPVGRSFFTASEGCSNPLGGGREVWFGFHQSVRPSLWKMMLN 217 Query: 187 IDVSTTMIVKPGPVVDF---LLANQKVDHPNK--IDWPKAK--RALKNLRIKTS---PAN 336 IDVS T K PV++F +L + ++ K D + K + +K L+++ + Sbjct: 218 IDVSATAFYKAQPVIEFVCEVLDFKSIEEQQKPLTDSQRVKFTKEIKGLKVEITHCGQMK 277 Query: 337 TEYKIVGLSDRNCYEQMFSLKQRNGGNGEPEAIEISVYDYFVKNRGIELRYSGDFPCINV 516 +Y++ ++ R Q F L+Q +G + +E +V YF + LRY PC+ V Sbjct: 278 RKYRVCNVTRRPASHQTFPLQQESG-----QTVECTVAQYFKDRHKLVLRYP-HLPCLQV 331 Query: 517 GKPKRPTYFPIELCQLVPLQRYTKSLSTLQRSSL 618 G+ ++ TY P+E+C +V QR K L+ Q S++ Sbjct: 332 GQEQKHTYLPLEVCNIVAGQRCIKKLTDNQTSTM 365
>I2C2_BOVIN (Q6QME8) Eukaryotic translation initiation factor 2C 2 (eIF2C 2)| (eIF-2C 2) (Argonaute-2) Length = 860 Score = 87.8 bits (216), Expect = 2e-17 Identities = 63/214 (29%), Positives = 108/214 (50%), Gaps = 10/214 (4%) Frame = +1 Query: 7 SLRVIDIILRQHSAKQGCLLVRQSFFHNNPSNFVDLGGGVMGCRGFHSSFRATQSGLSLN 186 +++ +D+++R H V +SFF + LGGG GFH S R + + LN Sbjct: 159 TIQALDVVMR-HLPSMRYTPVGRSFFTASEGCSNPLGGGREVWFGFHQSVRPSLWKMMLN 217 Query: 187 IDVSTTMIVKPGPVVDF---LLANQKVDHPNK--IDWPKAK--RALKNLRIKTS---PAN 336 IDVS T K PV++F +L + ++ K D + K + +K L+++ + Sbjct: 218 IDVSATAFYKAQPVIEFVCEVLDFKSIEEQQKPLTDSQRVKFTKEIKGLKVEITHCGQMK 277 Query: 337 TEYKIVGLSDRNCYEQMFSLKQRNGGNGEPEAIEISVYDYFVKNRGIELRYSGDFPCINV 516 +Y++ ++ R Q F L+Q +G + +E +V YF + LRY PC+ V Sbjct: 278 RKYRVCNVTRRPASHQTFPLQQESG-----QTVECTVAQYFKDRHKLVLRYP-HLPCLQV 331 Query: 517 GKPKRPTYFPIELCQLVPLQRYTKSLSTLQRSSL 618 G+ ++ TY P+E+C +V QR K L+ Q S++ Sbjct: 332 GQEQKHTYLPLEVCNIVAGQRCIKKLTDNQTSTM 365
>AGO1_SCHPO (O74957) Cell cycle control protein ago1 (RNA interference pathway| protein ago1) Length = 834 Score = 79.3 bits (194), Expect = 8e-15 Identities = 62/215 (28%), Positives = 106/215 (49%), Gaps = 11/215 (5%) Frame = +1 Query: 7 SLRVIDIILRQHSAKQGCLLVRQSFFHNNPSNFVDLGGGVMGCRGFHSSFRATQSGLSLN 186 S+ +D++L++ ++ SFF N V LGGGV +GF+ S R Q +S+N Sbjct: 141 SIMFLDLLLKKKPSET-LFGFMHSFFTGE--NGVSLGGGVEAWKGFYQSIRPNQGFMSVN 197 Query: 187 IDVSTTMIVKPGPVVDFLLAN---QKVDHPNKIDWPKAKRALKNLRIK--------TSPA 333 +D+S++ + ++ L+ V + D + R + L++ T A Sbjct: 198 VDISSSAFWRNDSLLQILMEYTDCSNVRDLTRFDLKRLSRKFRFLKVTCQHRNNVGTDLA 257 Query: 334 NTEYKIVGLSDRNCYEQMFSLKQRNGGNGEPEAIEISVYDYFVKNRGIELRYSGDFPCIN 513 N Y I G S ++ + F +++ NG E +ISV +YF++N + L+Y + PCI Sbjct: 258 NRVYSIEGFSSKSASDSFF-VRRLNG-----EEQKISVAEYFLENHNVRLQYP-NLPCIL 310 Query: 514 VGKPKRPTYFPIELCQLVPLQRYTKSLSTLQRSSL 618 V K PIE C +V QRYT L++ Q +++ Sbjct: 311 V---KNGAMLPIEFCFVVKGQRYTAKLNSDQTANM 342
>AGO2_DROME (Q9VUQ5) Argonaute 2 protein| Length = 1214 Score = 43.9 bits (102), Expect = 4e-04 Identities = 40/198 (20%), Positives = 86/198 (43%), Gaps = 11/198 (5%) Frame = +1 Query: 4 RSLRVIDIILRQHSAKQGCLLVRQSFFHNNPSNFVDLGGGVMGCRGFHSSFRATQSGLSL 183 R+++ ++++L + + R F ++P+N +L G G + +F L Sbjct: 531 RAMQCVEVVLASPCHNKAIRVGRSFFKMSDPNNRHELDDGYEALVGLYQAFMLGDRPF-L 589 Query: 184 NIDVSTTMIVKPGPVVDFL---LANQKVDHPNKIDWPKA--KRALKNLRIKTSP------ 330 N+D+S P++++L K+++ +D+ + + L+ + + +P Sbjct: 590 NVDISHKSFPISMPMIEYLERFSLKAKINNTTNLDYSRRFLEPFLRGINVVYTPPQSFQS 649 Query: 331 ANTEYKIVGLSDRNCYEQMFSLKQRNGGNGEPEAIEISVYDYFVKNRGIELRYSGDFPCI 510 A Y++ GLS + F E + ++++ YF +R L++ C+ Sbjct: 650 APRVYRVNGLSRAPASSETF----------EHDGKKVTIASYF-HSRNYPLKFP-QLHCL 697 Query: 511 NVGKPKRPTYFPIELCQL 564 NVG + PIELC + Sbjct: 698 NVGSSIKSILLPIELCSI 715
>YO43_CAEEL (P34681) Hypothetical protein ZK757.3| Length = 1040 Score = 43.5 bits (101), Expect = 5e-04 Identities = 25/70 (35%), Positives = 38/70 (54%) Frame = +1 Query: 409 GGNGEPEAIEISVYDYFVKNRGIELRYSGDFPCINVGKPKRPTYFPIELCQLVPLQRYTK 588 G + E + SV DYF + G L+Y PC++VG P R + P+E C + Q+Y K Sbjct: 435 GIDEEGRQVVCSVADYFSEKYG-PLKYP-KLPCLHVGPPTRNIFLPMEHCLIDSPQKYNK 492 Query: 589 SLSTLQRSSL 618 +S Q S++ Sbjct: 493 KMSEKQTSAI 502
>YQ53_CAEEL (Q09249) Hypothetical protein C16C10.3| Length = 1032 Score = 36.6 bits (83), Expect = 0.061 Identities = 25/97 (25%), Positives = 47/97 (48%), Gaps = 1/97 (1%) Frame = +1 Query: 292 KRALKNLRIK-TSPANTEYKIVGLSDRNCYEQMFSLKQRNGGNGEPEAIEISVYDYFVKN 468 + ALK L ++ T ++ +++ N F +K G E++V +YF+ Sbjct: 395 EEALKGLDVECTHLKGNLIRVSSIAENNAENTSFMMKDDKGER------EVTVAEYFLLQ 448 Query: 469 RGIELRYSGDFPCINVGKPKRPTYFPIELCQLVPLQR 579 I+L+Y P + + K ++FP+EL ++ P QR Sbjct: 449 YNIKLKYP-RLPLVVSKRFKHESFFPMELLRIAPGQR 484
>SYL_METJA (Q58050) Leucyl-tRNA synthetase (EC 6.1.1.4) (Leucine--tRNA ligase)| (LeuRS) Length = 942 Score = 35.0 bits (79), Expect = 0.18 Identities = 23/82 (28%), Positives = 38/82 (46%), Gaps = 2/82 (2%) Frame = +1 Query: 235 FLLANQKVDHPNKIDWPKAKRALKNLRIKTS-PANTEYKIVGLSDRNCYEQMFSL-KQRN 408 F+ N + KIDW K K ++ + T P + I LSD Y +++ K N Sbjct: 477 FIPENLRQVFHEKIDWMKDKACVRRRGLGTKFPFEEGWVIESLSDSTIYPAYYTVAKYIN 536 Query: 409 GGNGEPEAIEISVYDYFVKNRG 474 N +PE + + ++DY +G Sbjct: 537 QHNIKPEQLTLELFDYVFLGKG 558
>AGLE_RHIME (Q9Z3R5) Alpha-glucosides-binding periplasmic protein aglE| precursor Length = 458 Score = 33.1 bits (74), Expect = 0.68 Identities = 15/25 (60%), Positives = 19/25 (76%) Frame = +1 Query: 418 GEPEAIEISVYDYFVKNRGIELRYS 492 GE EA+ SVY YFV+ G+EL+YS Sbjct: 67 GEDEALFKSVYAYFVEATGVELKYS 91
>SYL_METMA (Q8Q054) Leucyl-tRNA synthetase (EC 6.1.1.4) (Leucine--tRNA ligase)| (LeuRS) Length = 966 Score = 31.6 bits (70), Expect = 2.0 Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 2/76 (2%) Frame = +1 Query: 253 KVDHPNKIDWPKAKRALKNLRIKTS-PANTEYKIVGLSDRNCYEQMFSLKQ-RNGGNGEP 426 +V+ NKIDW K K + + T P + E+ I L D Y + + + G Sbjct: 482 RVEFENKIDWLKDKACARRKGLGTRLPFDKEWLIESLGDSTIYMSYYIIARFIEKGELAL 541 Query: 427 EAIEISVYDYFVKNRG 474 E + +S +DY + +G Sbjct: 542 EHLTLSFFDYVLLGKG 557
>SYL_METAC (Q8TQD3) Leucyl-tRNA synthetase (EC 6.1.1.4) (Leucine--tRNA ligase)| (LeuRS) Length = 961 Score = 30.4 bits (67), Expect = 4.4 Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 2/76 (2%) Frame = +1 Query: 253 KVDHPNKIDWPKAKRALKNLRIKTS-PANTEYKIVGLSDRNCYEQMFSLKQ-RNGGNGEP 426 +V+ NK+DW K K + + T P + E+ I L D Y + + + G+ Sbjct: 482 RVEFENKVDWLKDKACARRKGLGTRLPFDKEWLIESLGDSTIYMSYYIIARFLERGDLAL 541 Query: 427 EAIEISVYDYFVKNRG 474 E + +S +DY + G Sbjct: 542 EQLTLSFFDYVLLGIG 557
>Y374_METJA (Q57819) Hypothetical protein MJ0374| Length = 330 Score = 30.4 bits (67), Expect = 4.4 Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 1/54 (1%) Frame = -1 Query: 569 GTSWQSSMGKYVG-RLGFPTFIQGKSPEYLSSIPRFFTK*SYTDISIASGSPFP 411 GT+ G ++G +LG P FI+ +YL FF K + IA SP P Sbjct: 64 GTTLGGLFGYFLGDKLGHPIFIKLFGEKYLHKGEEFFNKYGVYGVVIAGFSPLP 117
>GFRA2_HUMAN (O00451) GDNF family receptor alpha-2 precursor (GFR-alpha-2)| (Neurturin receptor alpha) (NTNR-alpha) (NRTNR-alpha) (TGF-beta-related neurotrophic factor receptor 2) (GDNF receptor beta) (GDNFR-beta) (RET ligand 2) Length = 464 Score = 29.6 bits (65), Expect = 7.5 Identities = 14/45 (31%), Positives = 21/45 (46%) Frame = -1 Query: 605 CRVLKDLVYLCKGTSWQSSMGKYVGRLGFPTFIQGKSPEYLSSIP 471 CR V C ++Q+ +G Y G +GF +P Y+ S P Sbjct: 275 CRASYQTVTSCPADNYQACLGSYAGMIGF-----DMTPNYVDSSP 314
>P2P_LACPA (Q02470) PII-type proteinase precursor (EC 3.4.21.96) (Lactocepin)| (Cell wall-associated serine proteinase) (LP151) Length = 1902 Score = 29.3 bits (64), Expect = 9.8 Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 2/52 (3%) Frame = +1 Query: 196 STTMIVKPGPVVDFLLANQKVDHPNKIDWPKAKRALKNL--RIKTSPANTEY 345 ST + P VD+++ N K D P ++ AK+AL NL KT A+ +Y Sbjct: 1560 STDLYGNESPAVDYVVTNIKADDPAQLQ--TAKQALTNLIASAKTLSASGKY 1609
>POTI_ECOLI (P0AFL1) Putrescine transport system permease protein potI| Length = 281 Score = 29.3 bits (64), Expect = 9.8 Identities = 21/65 (32%), Positives = 30/65 (46%) Frame = -1 Query: 371 FLSLKPTILYSVFAGLVFILKFLSARLALGQSILLGWSTFWLASRKSTTGPGFTIIVVET 192 F+ P ++ V GL +L F++ A+G G T WLA T + VV + Sbjct: 104 FMITAPLVMPDVITGLSLLLLFVALAHAIGWPADRGMLTIWLAHVTFCTA---YVAVVIS 160 Query: 191 SILRE 177 S LRE Sbjct: 161 SRLRE 165
>POTI_ECOL6 (P0AFL2) Putrescine transport system permease protein potI| Length = 281 Score = 29.3 bits (64), Expect = 9.8 Identities = 21/65 (32%), Positives = 30/65 (46%) Frame = -1 Query: 371 FLSLKPTILYSVFAGLVFILKFLSARLALGQSILLGWSTFWLASRKSTTGPGFTIIVVET 192 F+ P ++ V GL +L F++ A+G G T WLA T + VV + Sbjct: 104 FMITAPLVMPDVITGLSLLLLFVALAHAIGWPADRGMLTIWLAHVTFCTA---YVAVVIS 160 Query: 191 SILRE 177 S LRE Sbjct: 161 SRLRE 165 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 96,340,970 Number of Sequences: 219361 Number of extensions: 2119722 Number of successful extensions: 5299 Number of sequences better than 10.0: 27 Number of HSP's better than 10.0 without gapping: 5122 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5274 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5653129581 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
