ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags17p11 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT008960.1| Triticum aestivum clone wdk1c.pk012.i2:fis, full insert mRNA sequence Length = 2815 Score = 993 bits (501), Expect = 0.0 Identities = 592/621 (95%), Gaps = 1/621 (0%) Strand = Plus / Plus Query: 1 gcaagaagcc-ttcgggttattgatatcatattgaggcaacactctgccaaacagggctg 59 |||||||||| |||||||||||||||||||||| || || |||||||||||||||||||| Sbjct: 450 gcaagaagccattcgggttattgatatcatattaagacagcactctgccaaacagggctg 509 Query: 60 cctgttagtccgtcagtcattttttcacaacaatccttcaaactttgtggacttgggtgg 119 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 510 cctgttagtccgccagtcattttttcacaacaatccttcaaactttgtggacttgggtgg 569 Query: 120 aggggtaatgggctgcagaggtttccactcaagctttcgagccacacagagtgggctttc 179 || || ||||||||| |||||||||||||||||||||||||||||||||| |||||||| Sbjct: 570 gggtgtgatgggctgccgaggtttccactcaagctttcgagccacacagagcgggctttc 629 Query: 180 tctcaatattgatgtttctaccacaatgattgtgaaacctggacctgttgttgattttct 239 ||| ||||||||||||||||| |||||||||||||||||||| |||||||| |||||||| Sbjct: 630 tcttaatattgatgtttctacaacaatgattgtgaaacctggccctgttgtcgattttct 689 Query: 240 gctggccaaccagaaggttgaccaccctaacaaaattgattggcctaaggccaagcgtgc 299 |||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||| Sbjct: 690 gctggccaaccagaaggttgaccaccctaataaaattgattgggctaaggccaagcgtgc 749 Query: 300 actcaagaatttaaggataaaaacaagcccagcaaatacagaatacaagattgttggttt 359 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 750 acttaagaatttaaggataaaaacaagcccagcaaatacagaatacaagattgttggttt 809 Query: 360 gagtgataggaactgttatgaacaaatgttttccctcaagcaaaggaatggtgggaatgg 419 |||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 810 gagtgagaggaattgttatgaacaaatgttttccctcaagcaaaggaatggtgggaatgg 869 Query: 420 tgaacctgaagcaatagaaatatctgtgtatgattactttgtgaagaaccgtgggattga 479 ||| ||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| Sbjct: 870 tgaccctgaagcaatagaaatatctgtttatgattactttgtgaagaaccgtggcattga 929 Query: 480 gcttaggtactctggtgatttcccttgtataaatgttgggaaacctaagcggccaacgta 539 ||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||| || Sbjct: 930 gctgaggtactctggtgatttcccttgtataaatgttgggaaacctaggcggccaacata 989 Query: 540 ttttcccatcgagctctgccagctggtgcctttgcaaaggtacaccaaatctttgagtac 599 ||||||||| ||||||||||||||||| ||||| |||||||| ||||||||||||||||| Sbjct: 990 ttttcccattgagctctgccagctggtccctttacaaaggtataccaaatctttgagtac 1049 Query: 600 cctacaaagatcatctcttgt 620 ||||||||||||||||||||| Sbjct: 1050 cctacaaagatcatctcttgt 1070
>gb|BT009411.1| Triticum aestivum clone wlm96.pk061.n18:fis, full insert mRNA sequence Length = 890 Score = 652 bits (329), Expect = 0.0 Identities = 374/389 (96%) Strand = Plus / Plus Query: 232 gattttctgctggccaaccagaaggttgaccaccctaacaaaattgattggcctaaggcc 291 |||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||| Sbjct: 3 gattttctgctggccaaccagaaggttgaccaccctaataaaattgattgggctaaggcc 62 Query: 292 aagcgtgcactcaagaatttaaggataaaaacaagcccagcaaatacagaatacaagatt 351 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63 aagcgtgcacttaagaatttaaggataaaaacaagcccagcaaatacagaatacaagatt 122 Query: 352 gttggtttgagtgataggaactgttatgaacaaatgttttccctcaagcaaaggaatggt 411 |||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 123 gttggtttgagtgagaggaattgttatgaacaaatgttttccctcaagcaaaggaatggt 182 Query: 412 gggaatggtgaacctgaagcaatagaaatatctgtgtatgattactttgtgaagaaccgt 471 ||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 183 gggaatggtgaccctgaagcaatagaaatatctgtttatgattactttgtgaagaaccgt 242 Query: 472 gggattgagcttaggtactctggtgatttcccttgtataaatgttgggaaacctaagcgg 531 || |||||||| ||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 243 ggcattgagctgaggtactctggtgatttcccttgtataaatgttgggaaacctaggcgg 302 Query: 532 ccaacgtattttcccatcgagctctgccagctggtgcctttgcaaaggtacaccaaatct 591 ||||| ||||||||||| ||||||||||||||||| ||||| |||||||| ||||||||| Sbjct: 303 ccaacatattttcccattgagctctgccagctggtccctttacaaaggtataccaaatct 362 Query: 592 ttgagtaccctacaaagatcatctcttgt 620 ||||||||||||||||||||||||||||| Sbjct: 363 ttgagtaccctacaaagatcatctcttgt 391
>ref|NM_188086.1| Oryza sativa (japonica cultivar-group), Ozsa8518 predicted mRNA Length = 2715 Score = 446 bits (225), Expect = e-122 Identities = 503/595 (84%), Gaps = 3/595 (0%) Strand = Plus / Plus Query: 11 ttcgggttattgatatcatattgaggcaacactctgccaaacagggctgcctgttagtcc 70 |||| ||||||||||||||||| || || || || || |||||||| ||||| || || | Sbjct: 608 ttcgtgttattgatatcatattaagacagcattccgcaaaacagggttgccttttggttc 667 Query: 71 gtcagtcattttttcacaacaatccttcaaactttgtggacttgggtggaggggtaatgg 130 | || || ||||| || |||||||||||||| ||||| ||||||||||| || || |||| Sbjct: 668 gccaatcctttttccataacaatccttcaaattttgttgacttgggtggtggtgtgatgg 727 Query: 131 gctgcagaggtttccactcaagctttcgagccacacagagtgggctttctctcaatattg 190 |||| || || ||||| |||||||| ||||| ||||||||||| ||||| |||||||| | Sbjct: 728 gctgtaggggattccattcaagcttccgagctacacagagtggactttcactcaatatcg 787 Query: 191 atgtttctaccacaatgattgtgaaacctggacctgttgttgattttctgctggccaacc 250 |||| || || || ||||||||||||||||| ||||| || |||||||| || ||||||| Sbjct: 788 atgtgtccacaacgatgattgtgaaacctggtcctgtggtagattttctacttgccaacc 847 Query: 251 agaaggttgaccaccctaacaaaattgattggcctaaggccaagcgtgcactcaagaatt 310 |||||||||| ||||| ||||||||||| ||| | |||||||||||||| || ||||||| Sbjct: 848 agaaggttgatcacccaaacaaaattgactgggcaaaggccaagcgtgctctgaagaatt 907 Query: 311 taaggataaaaacaagcccagcaaatacagaatacaagattgttggtttgagtgatagga 370 |||||||||||||||| ||||||||||| |||||||||||||||||||||||||| || | Sbjct: 908 taaggataaaaacaagtccagcaaatactgaatacaagattgttggtttgagtgagagaa 967 Query: 371 actgttatgaacaaatgttttccctcaagcaaaggaatggtgggaatggtgaacctgaag 430 |||| |||||||||||||| | | |||||||| ||||||| ||||||||||||||| Sbjct: 968 actgctatgaacaaatgttcactttgaagcaaagaaatggtg---atggtgaacctgaag 1024 Query: 431 caatagaaatatctgtgtatgattactttgtgaagaaccgtgggattgagcttaggtact 490 | ||| ||||||| || || |||||||||||||| || || || ||| | || |||| Sbjct: 1025 gtgtggaagtatctgtttacgagtactttgtgaagaatcggggcatagagttgagatact 1084 Query: 491 ctggtgatttcccttgtataaatgttgggaaacctaagcggccaacgtattttcccatcg 550 |||||||||| || ||||| ||||| |||||||| || |||||||| |||||||| || | Sbjct: 1085 ctggtgattttccctgtatcaatgtggggaaaccaaaacggccaacttattttccaattg 1144 Query: 551 agctctgccagctggtgcctttgcaaaggtacaccaaatctttgagtaccctaca 605 |||||||| || ||||||||||||||||| ||||| |||||||||| ||||| Sbjct: 1145 agctctgctctcttgtgcctttgcaaaggtataccaaggctttgagtacactaca 1199
>dbj|AK121307.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023111L20, full insert sequence Length = 3027 Score = 438 bits (221), Expect = e-119 Identities = 502/595 (84%), Gaps = 3/595 (0%) Strand = Plus / Plus Query: 11 ttcgggttattgatatcatattgaggcaacactctgccaaacagggctgcctgttagtcc 70 |||| ||||||||||||||||| || || || || || |||||||| ||||| || || | Sbjct: 756 ttcgtgttattgatatcatattaagacagcattccgcaaaacagggttgccttttggttc 815 Query: 71 gtcagtcattttttcacaacaatccttcaaactttgtggacttgggtggaggggtaatgg 130 | || || ||||| || |||||||||||||| ||||| ||||||||||| || || |||| Sbjct: 816 gccaatcctttttccataacaatccttcaaattttgttgacttgggtggtggtgtgatgg 875 Query: 131 gctgcagaggtttccactcaagctttcgagccacacagagtgggctttctctcaatattg 190 |||| || || ||||| |||||||| ||||| ||||||||||| ||||| |||||||| | Sbjct: 876 gctgtaggggattccattcaagcttccgagctacacagagtggactttcactcaatatcg 935 Query: 191 atgtttctaccacaatgattgtgaaacctggacctgttgttgattttctgctggccaacc 250 |||| || || || ||||||||||||||||| ||||| || |||||||| || ||||||| Sbjct: 936 atgtgtccacaacgatgattgtgaaacctggtcctgtggtagattttctacttgccaacc 995 Query: 251 agaaggttgaccaccctaacaaaattgattggcctaaggccaagcgtgcactcaagaatt 310 |||||||||| ||||| ||||||||||| ||| | |||||||||||||| || ||||||| Sbjct: 996 agaaggttgatcacccaaacaaaattgactgggcaaaggccaagcgtgctctgaagaatt 1055 Query: 311 taaggataaaaacaagcccagcaaatacagaatacaagattgttggtttgagtgatagga 370 |||||||||||||||| ||||||||||| |||||||||||||||||||||||||| || | Sbjct: 1056 taaggataaaaacaagtccagcaaatactgaatacaagattgttggtttgagtgagagaa 1115 Query: 371 actgttatgaacaaatgttttccctcaagcaaaggaatggtgggaatggtgaacctgaag 430 |||| |||||||||||||| | | |||||||| |||| || ||||||||||||||| Sbjct: 1116 actgctatgaacaaatgttcactttgaagcaaagaaatgatg---atggtgaacctgaag 1172 Query: 431 caatagaaatatctgtgtatgattactttgtgaagaaccgtgggattgagcttaggtact 490 | ||| ||||||| || || |||||||||||||| || || || ||| | || |||| Sbjct: 1173 gtgtggaagtatctgtttacgagtactttgtgaagaatcggggcatagagttgagatact 1232 Query: 491 ctggtgatttcccttgtataaatgttgggaaacctaagcggccaacgtattttcccatcg 550 |||||||||| || ||||| ||||| |||||||| || |||||||| |||||||| || | Sbjct: 1233 ctggtgattttccctgtatcaatgtggggaaaccaaaacggccaacttattttccaattg 1292 Query: 551 agctctgccagctggtgcctttgcaaaggtacaccaaatctttgagtaccctaca 605 |||||||| || ||||||||||||||||| ||||| |||||||||| ||||| Sbjct: 1293 agctctgctctcttgtgcctttgcaaaggtataccaaggctttgagtacactaca 1347
>dbj|AK064813.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000E08, full insert sequence Length = 3047 Score = 438 bits (221), Expect = e-119 Identities = 502/595 (84%), Gaps = 3/595 (0%) Strand = Plus / Plus Query: 11 ttcgggttattgatatcatattgaggcaacactctgccaaacagggctgcctgttagtcc 70 |||| ||||||||||||||||| || || || || || |||||||| ||||| || || | Sbjct: 768 ttcgtgttattgatatcatattaagacagcattccgcaaaacagggttgccttttggttc 827 Query: 71 gtcagtcattttttcacaacaatccttcaaactttgtggacttgggtggaggggtaatgg 130 | || || ||||| || |||||||||||||| ||||| ||||||||||| || || |||| Sbjct: 828 gccaatcctttttccataacaatccttcaaattttgttgacttgggtggtggtgtgatgg 887 Query: 131 gctgcagaggtttccactcaagctttcgagccacacagagtgggctttctctcaatattg 190 |||| || || ||||| |||||||| ||||| ||||||||||| ||||| |||||||| | Sbjct: 888 gctgtaggggattccattcaagcttccgagctacacagagtggactttcactcaatatcg 947 Query: 191 atgtttctaccacaatgattgtgaaacctggacctgttgttgattttctgctggccaacc 250 |||| || || || ||||||||||||||||| ||||| || |||||||| || ||||||| Sbjct: 948 atgtgtccacaacgatgattgtgaaacctggtcctgtggtagattttctacttgccaacc 1007 Query: 251 agaaggttgaccaccctaacaaaattgattggcctaaggccaagcgtgcactcaagaatt 310 |||||||||| ||||| ||||||||||| ||| | |||||||||||||| | ||||||| Sbjct: 1008 agaaggttgatcacccaaacaaaattgactgggcaaaggccaagcgtgctccgaagaatt 1067 Query: 311 taaggataaaaacaagcccagcaaatacagaatacaagattgttggtttgagtgatagga 370 |||||||||||||||| ||||||||||| |||||||||||||||||||||||||| || | Sbjct: 1068 taaggataaaaacaagtccagcaaatactgaatacaagattgttggtttgagtgagagaa 1127 Query: 371 actgttatgaacaaatgttttccctcaagcaaaggaatggtgggaatggtgaacctgaag 430 |||| |||||||||||||| | | |||||||| ||||||| ||||||||||||||| Sbjct: 1128 actgctatgaacaaatgttcactttgaagcaaagaaatggtg---atggtgaacctgaag 1184 Query: 431 caatagaaatatctgtgtatgattactttgtgaagaaccgtgggattgagcttaggtact 490 | ||| ||||||| || || |||||||||||||| || || || ||| | || |||| Sbjct: 1185 gtgtggaagtatctgtttacgagtactttgtgaagaatcggggcatagagttgagatact 1244 Query: 491 ctggtgatttcccttgtataaatgttgggaaacctaagcggccaacgtattttcccatcg 550 |||||||||| || ||||| ||||| |||||||| || |||||||| |||||||| || | Sbjct: 1245 ctggtgattttccctgtatcaatgtggggaaaccaaaacggccaacttattttccaattg 1304 Query: 551 agctctgccagctggtgcctttgcaaaggtacaccaaatctttgagtaccctaca 605 |||||||| || ||||||||||||||||| ||||| |||||||||| ||||| Sbjct: 1305 agctctgctctcttgtgcctttgcaaaggtataccaaggctttgagtacactaca 1359
>dbj|AK122078.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033119H08, full insert sequence Length = 3385 Score = 250 bits (126), Expect = 5e-63 Identities = 291/346 (84%) Strand = Plus / Plus Query: 20 ttgatatcatattgaggcaacactctgccaaacagggctgcctgttagtccgtcagtcat 79 ||||||| ||||| ||||| |||||||| |||||||||||||| ||||| || ||||||| Sbjct: 939 ttgatataatattaaggcagcactctgctaaacagggctgccttttagtacgccagtcat 998 Query: 80 tttttcacaacaatccttcaaactttgtggacttgggtggaggggtaatgggctgcagag 139 |||| |||||||||||| |||||||| ||| ||||||| || || |||||||| ||| Sbjct: 999 ttttccacaacaatcctaataactttgttgacctgggtggtggtgtgatgggctgtcgag 1058 Query: 140 gtttccactcaagctttcgagccacacagagtgggctttctctcaatattgatgtttcta 199 | ||||| ||||| || || | |||||||||||| |||||||| ||||| |||||||| | Sbjct: 1059 gattccattcaagtttccgtggcacacagagtggactttctctgaatatcgatgtttcga 1118 Query: 200 ccacaatgattgtgaaacctggacctgttgttgattttctgctggccaaccagaaggttg 259 | || |||||||| |||||||| |||||| | |||||||| || ||||||||||| |||| Sbjct: 1119 caactatgattgttaaacctggtcctgttatcgattttcttcttgccaaccagaaagttg 1178 Query: 260 accaccctaacaaaattgattggcctaaggccaagcgtgcactcaagaatttaaggataa 319 | |||||| ||| ||||||||||| |||||||||||||| |||||||| || ||||||| Sbjct: 1179 atcaccctgacagaattgattggcaaaaggccaagcgtgctctcaagaacttgaggataa 1238 Query: 320 aaacaagcccagcaaatacagaatacaagattgttggtttgagtga 365 ||| | ||| | ||| |||||| |||||| ||||||||||||| Sbjct: 1239 gaaccacccctgtgaattcagaattcaagatcattggtttgagtga 1284
>dbj|AK065274.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002L10, full insert sequence Length = 3178 Score = 250 bits (126), Expect = 5e-63 Identities = 291/346 (84%) Strand = Plus / Plus Query: 20 ttgatatcatattgaggcaacactctgccaaacagggctgcctgttagtccgtcagtcat 79 ||||||| ||||| ||||| |||||||| |||||||||||||| ||||| || ||||||| Sbjct: 758 ttgatataatattaaggcagcactctgctaaacagggctgccttttagtacgccagtcat 817 Query: 80 tttttcacaacaatccttcaaactttgtggacttgggtggaggggtaatgggctgcagag 139 |||| |||||||||||| |||||||| ||| ||||||| || || |||||||| ||| Sbjct: 818 ttttccacaacaatcctaataactttgttgacctgggtggtggtgtgatgggctgtcgag 877 Query: 140 gtttccactcaagctttcgagccacacagagtgggctttctctcaatattgatgtttcta 199 | ||||| ||||| || || | |||||||||||| |||||||| ||||| |||||||| | Sbjct: 878 gattccattcaagtttccgtggcacacagagtggactttctctgaatatcgatgtttcga 937 Query: 200 ccacaatgattgtgaaacctggacctgttgttgattttctgctggccaaccagaaggttg 259 | || |||||||| |||||||| |||||| | |||||||| || ||||||||||| |||| Sbjct: 938 caactatgattgttaaacctggtcctgttatcgattttcttcttgccaaccagaaagttg 997 Query: 260 accaccctaacaaaattgattggcctaaggccaagcgtgcactcaagaatttaaggataa 319 | |||||| ||| ||||||||||| |||||||||||||| |||||||| || ||||||| Sbjct: 998 atcaccctgacagaattgattggcaaaaggccaagcgtgctctcaagaacttgaggataa 1057 Query: 320 aaacaagcccagcaaatacagaatacaagattgttggtttgagtga 365 ||| | ||| | ||| |||||| |||||| ||||||||||||| Sbjct: 1058 gaaccacccctgtgaattcagaattcaagatcattggtttgagtga 1103
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 147 bits (74), Expect = 5e-32 Identities = 95/102 (93%) Strand = Plus / Minus Query: 287 aggccaagcgtgcactcaagaatttaaggataaaaacaagcccagcaaatacagaataca 346 ||||||||||||| || ||||||||||||||||||||||| ||||||||||| ||||||| Sbjct: 9634745 aggccaagcgtgctctgaagaatttaaggataaaaacaagtccagcaaatactgaataca 9634686 Query: 347 agattgttggtttgagtgataggaactgttatgaacaaatgt 388 ||||||||||||||||||| || ||||| ||||||||||||| Sbjct: 9634685 agattgttggtttgagtgagagaaactgctatgaacaaatgt 9634644 Score = 99.6 bits (50), Expect = 1e-17 Identities = 95/110 (86%) Strand = Plus / Minus Query: 79 ttttttcacaacaatccttcaaactttgtggacttgggtggaggggtaatgggctgcaga 138 ||||| || |||||||||||||| ||||| ||||||||||| || || |||||||| || Sbjct: 9635165 tttttccataacaatccttcaaattttgttgacttgggtggtggtgtgatgggctgtagg 9635106 Query: 139 ggtttccactcaagctttcgagccacacagagtgggctttctctcaatat 188 || ||||| |||||||| ||||| ||||||||||| ||||| |||||||| Sbjct: 9635105 ggattccattcaagcttccgagctacacagagtggactttcactcaatat 9635056 Score = 91.7 bits (46), Expect = 3e-15 Identities = 67/74 (90%) Strand = Plus / Minus Query: 205 atgattgtgaaacctggacctgttgttgattttctgctggccaaccagaaggttgaccac 264 ||||||||||||||||| ||||| || |||||||| || ||||||||||||||||| ||| Sbjct: 9634935 atgattgtgaaacctggtcctgtggtagattttctacttgccaaccagaaggttgatcac 9634876 Query: 265 cctaacaaaattga 278 || ||||||||||| Sbjct: 9634875 ccaaacaaaattga 9634862 Score = 85.7 bits (43), Expect = 2e-13 Identities = 123/149 (82%), Gaps = 3/149 (2%) Strand = Plus / Minus Query: 397 aagcaaaggaatggtgggaatggtgaacctgaagcaatagaaatatctgtgtatgattac 456 |||||||| ||||||| ||||||||||||||| | ||| ||||||| || || ||| Sbjct: 9634495 aagcaaagaaatggtg---atggtgaacctgaaggtgtggaagtatctgtttacgagtac 9634439 Query: 457 tttgtgaagaaccgtgggattgagcttaggtactctggtgatttcccttgtataaatgtt 516 ||||||||||| || || || ||| | || |||||||||||||| || ||||| ||||| Sbjct: 9634438 tttgtgaagaatcggggcatagagttgagatactctggtgattttccctgtatcaatgtg 9634379 Query: 517 gggaaacctaagcggccaacgtattttcc 545 |||||||| || |||||||| |||||||| Sbjct: 9634378 gggaaaccaaaacggccaacttattttcc 9634350 Score = 50.1 bits (25), Expect = 0.009 Identities = 37/41 (90%) Strand = Plus / Minus Query: 565 gtgcctttgcaaaggtacaccaaatctttgagtaccctaca 605 ||||||||||||||||| ||||| |||||||||| ||||| Sbjct: 9634247 gtgcctttgcaaaggtataccaaggctttgagtacactaca 9634207 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 509 taaatgttgggaaacctaagcggccaac 536 ||||||||||||| || ||||||||||| Sbjct: 9617629 taaatgttgggaagccaaagcggccaac 9617602
>dbj|AP000836.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0038F12 Length = 190014 Score = 147 bits (74), Expect = 5e-32 Identities = 95/102 (93%) Strand = Plus / Minus Query: 287 aggccaagcgtgcactcaagaatttaaggataaaaacaagcccagcaaatacagaataca 346 ||||||||||||| || ||||||||||||||||||||||| ||||||||||| ||||||| Sbjct: 72748 aggccaagcgtgctctgaagaatttaaggataaaaacaagtccagcaaatactgaataca 72689 Query: 347 agattgttggtttgagtgataggaactgttatgaacaaatgt 388 ||||||||||||||||||| || ||||| ||||||||||||| Sbjct: 72688 agattgttggtttgagtgagagaaactgctatgaacaaatgt 72647 Score = 99.6 bits (50), Expect = 1e-17 Identities = 95/110 (86%) Strand = Plus / Minus Query: 79 ttttttcacaacaatccttcaaactttgtggacttgggtggaggggtaatgggctgcaga 138 ||||| || |||||||||||||| ||||| ||||||||||| || || |||||||| || Sbjct: 73168 tttttccataacaatccttcaaattttgttgacttgggtggtggtgtgatgggctgtagg 73109 Query: 139 ggtttccactcaagctttcgagccacacagagtgggctttctctcaatat 188 || ||||| |||||||| ||||| ||||||||||| ||||| |||||||| Sbjct: 73108 ggattccattcaagcttccgagctacacagagtggactttcactcaatat 73059 Score = 91.7 bits (46), Expect = 3e-15 Identities = 67/74 (90%) Strand = Plus / Minus Query: 205 atgattgtgaaacctggacctgttgttgattttctgctggccaaccagaaggttgaccac 264 ||||||||||||||||| ||||| || |||||||| || ||||||||||||||||| ||| Sbjct: 72938 atgattgtgaaacctggtcctgtggtagattttctacttgccaaccagaaggttgatcac 72879 Query: 265 cctaacaaaattga 278 || ||||||||||| Sbjct: 72878 ccaaacaaaattga 72865 Score = 85.7 bits (43), Expect = 2e-13 Identities = 123/149 (82%), Gaps = 3/149 (2%) Strand = Plus / Minus Query: 397 aagcaaaggaatggtgggaatggtgaacctgaagcaatagaaatatctgtgtatgattac 456 |||||||| ||||||| ||||||||||||||| | ||| ||||||| || || ||| Sbjct: 72498 aagcaaagaaatggtg---atggtgaacctgaaggtgtggaagtatctgtttacgagtac 72442 Query: 457 tttgtgaagaaccgtgggattgagcttaggtactctggtgatttcccttgtataaatgtt 516 ||||||||||| || || || ||| | || |||||||||||||| || ||||| ||||| Sbjct: 72441 tttgtgaagaatcggggcatagagttgagatactctggtgattttccctgtatcaatgtg 72382 Query: 517 gggaaacctaagcggccaacgtattttcc 545 |||||||| || |||||||| |||||||| Sbjct: 72381 gggaaaccaaaacggccaacttattttcc 72353 Score = 50.1 bits (25), Expect = 0.009 Identities = 37/41 (90%) Strand = Plus / Minus Query: 565 gtgcctttgcaaaggtacaccaaatctttgagtaccctaca 605 ||||||||||||||||| ||||| |||||||||| ||||| Sbjct: 72250 gtgcctttgcaaaggtataccaaggctttgagtacactaca 72210 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 509 taaatgttgggaaacctaagcggccaac 536 ||||||||||||| || ||||||||||| Sbjct: 55632 taaatgttgggaagccaaagcggccaac 55605
>emb|AL606693.3|OSJN00109 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0076A11, complete sequence Length = 127419 Score = 93.7 bits (47), Expect = 7e-16 Identities = 113/135 (83%) Strand = Plus / Minus Query: 54 gggctgcctgttagtccgtcagtcattttttcacaacaatccttcaaactttgtggactt 113 ||||||||| ||||| || ||||||||||| |||||||||||| |||||||| ||| | Sbjct: 125809 gggctgccttttagtacgccagtcatttttccacaacaatcctaataactttgttgacct 125750 Query: 114 gggtggaggggtaatgggctgcagaggtttccactcaagctttcgagccacacagagtgg 173 |||||| || || |||||||| |||| ||||| ||||| || || | |||||||||||| Sbjct: 125749 gggtggtggtgtgatgggctgtcgaggattccattcaagtttccgtggcacacagagtgg 125690 Query: 174 gctttctctcaatat 188 |||||||| ||||| Sbjct: 125689 actttctctgaatat 125675 Score = 83.8 bits (42), Expect = 6e-13 Identities = 81/94 (86%) Strand = Plus / Minus Query: 190 gatgtttctaccacaatgattgtgaaacctggacctgttgttgattttctgctggccaac 249 |||||||| || || |||||||| |||||||| |||||| | |||||||| || |||||| Sbjct: 125529 gatgtttcgacaactatgattgttaaacctggtcctgttatcgattttcttcttgccaac 125470 Query: 250 cagaaggttgaccaccctaacaaaattgattggc 283 ||||| ||||| |||||| ||| ||||||||||| Sbjct: 125469 cagaaagttgatcaccctgacagaattgattggc 125436 Score = 54.0 bits (27), Expect = 6e-04 Identities = 66/79 (83%) Strand = Plus / Minus Query: 287 aggccaagcgtgcactcaagaatttaaggataaaaacaagcccagcaaatacagaataca 346 ||||||||||||| |||||||| || ||||||| ||| | ||| | ||| |||||| || Sbjct: 125336 aggccaagcgtgctctcaagaacttgaggataagaaccacccctgtgaattcagaattca 125277 Query: 347 agattgttggtttgagtga 365 |||| ||||||||||||| Sbjct: 125276 agatcattggtttgagtga 125258
>emb|AL606655.3|OSJN00103 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0040D15, complete sequence Length = 130618 Score = 93.7 bits (47), Expect = 7e-16 Identities = 113/135 (83%) Strand = Plus / Minus Query: 54 gggctgcctgttagtccgtcagtcattttttcacaacaatccttcaaactttgtggactt 113 ||||||||| ||||| || ||||||||||| |||||||||||| |||||||| ||| | Sbjct: 2780 gggctgccttttagtacgccagtcatttttccacaacaatcctaataactttgttgacct 2721 Query: 114 gggtggaggggtaatgggctgcagaggtttccactcaagctttcgagccacacagagtgg 173 |||||| || || |||||||| |||| ||||| ||||| || || | |||||||||||| Sbjct: 2720 gggtggtggtgtgatgggctgtcgaggattccattcaagtttccgtggcacacagagtgg 2661 Query: 174 gctttctctcaatat 188 |||||||| ||||| Sbjct: 2660 actttctctgaatat 2646 Score = 83.8 bits (42), Expect = 6e-13 Identities = 81/94 (86%) Strand = Plus / Minus Query: 190 gatgtttctaccacaatgattgtgaaacctggacctgttgttgattttctgctggccaac 249 |||||||| || || |||||||| |||||||| |||||| | |||||||| || |||||| Sbjct: 2500 gatgtttcgacaactatgattgttaaacctggtcctgttatcgattttcttcttgccaac 2441 Query: 250 cagaaggttgaccaccctaacaaaattgattggc 283 ||||| ||||| |||||| ||| ||||||||||| Sbjct: 2440 cagaaagttgatcaccctgacagaattgattggc 2407 Score = 54.0 bits (27), Expect = 6e-04 Identities = 66/79 (83%) Strand = Plus / Minus Query: 287 aggccaagcgtgcactcaagaatttaaggataaaaacaagcccagcaaatacagaataca 346 ||||||||||||| |||||||| || ||||||| ||| | ||| | ||| |||||| || Sbjct: 2307 aggccaagcgtgctctcaagaacttgaggataagaaccacccctgtgaattcagaattca 2248 Query: 347 agattgttggtttgagtga 365 |||| ||||||||||||| Sbjct: 2247 agatcattggtttgagtga 2229
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 93.7 bits (47), Expect = 7e-16 Identities = 113/135 (83%) Strand = Plus / Minus Query: 54 gggctgcctgttagtccgtcagtcattttttcacaacaatccttcaaactttgtggactt 113 ||||||||| ||||| || ||||||||||| |||||||||||| |||||||| ||| | Sbjct: 3536514 gggctgccttttagtacgccagtcatttttccacaacaatcctaataactttgttgacct 3536455 Query: 114 gggtggaggggtaatgggctgcagaggtttccactcaagctttcgagccacacagagtgg 173 |||||| || || |||||||| |||| ||||| ||||| || || | |||||||||||| Sbjct: 3536454 gggtggtggtgtgatgggctgtcgaggattccattcaagtttccgtggcacacagagtgg 3536395 Query: 174 gctttctctcaatat 188 |||||||| ||||| Sbjct: 3536394 actttctctgaatat 3536380 Score = 83.8 bits (42), Expect = 6e-13 Identities = 81/94 (86%) Strand = Plus / Minus Query: 190 gatgtttctaccacaatgattgtgaaacctggacctgttgttgattttctgctggccaac 249 |||||||| || || |||||||| |||||||| |||||| | |||||||| || |||||| Sbjct: 3536234 gatgtttcgacaactatgattgttaaacctggtcctgttatcgattttcttcttgccaac 3536175 Query: 250 cagaaggttgaccaccctaacaaaattgattggc 283 ||||| ||||| |||||| ||| ||||||||||| Sbjct: 3536174 cagaaagttgatcaccctgacagaattgattggc 3536141 Score = 54.0 bits (27), Expect = 6e-04 Identities = 66/79 (83%) Strand = Plus / Minus Query: 287 aggccaagcgtgcactcaagaatttaaggataaaaacaagcccagcaaatacagaataca 346 ||||||||||||| |||||||| || ||||||| ||| | ||| | ||| |||||| || Sbjct: 3536041 aggccaagcgtgctctcaagaacttgaggataagaaccacccctgtgaattcagaattca 3535982 Query: 347 agattgttggtttgagtga 365 |||| ||||||||||||| Sbjct: 3535981 agatcattggtttgagtga 3535963
>gb|AY109357.1| Zea mays CL881_1 mRNA sequence Length = 3158 Score = 91.7 bits (46), Expect = 3e-15 Identities = 148/182 (81%) Strand = Plus / Plus Query: 136 agaggtttccactcaagctttcgagccacacagagtgggctttctctcaatattgatgtt 195 |||||||| || || || |||||||| || |||||||| ||||| |||||||| ||||| Sbjct: 864 agaggttttcattctagttttcgagcaacccagagtggactttcactcaatatcgatgtg 923 Query: 196 tctaccacaatgattgtgaaacctggacctgttgttgattttctgctggccaaccagaag 255 || || |||||||| ||||||||||| ||||| |||| |||||| | ||||| ||||| Sbjct: 924 tcgactacaatgatagtgaaacctggtcctgtcattgactttctgattgccaatcagaaa 983 Query: 256 gttgaccaccctaacaaaattgattggcctaaggccaagcgtgcactcaagaatttaagg 315 ||| | | || | || ||||||||| |||||| |||||||||||| ||||| || ||| Sbjct: 984 gttaatgatccaagcatgattgattgggctaagggcaagcgtgcactgaagaacttgagg 1043 Query: 316 at 317 || Sbjct: 1044 at 1045 Score = 50.1 bits (25), Expect = 0.009 Identities = 88/109 (80%) Strand = Plus / Plus Query: 487 tactctggtgatttcccttgtataaatgttgggaaacctaagcggccaacgtattttccc 546 |||||||||||| | ||||| || ||||| || |||| ||||||||||| |||||||| Sbjct: 1209 tactctggtgatcttccttgcatcaatgtgggaaaactaaagcggccaacatattttcca 1268 Query: 547 atcgagctctgccagctggtgcctttgcaaaggtacaccaaatctttga 595 || ||| | ||| || |||||||| ||||| ||||| ||| |||||| Sbjct: 1269 attgagttatgcagtcttgtgcctttacaaagatacactaaagctttga 1317 Score = 40.1 bits (20), Expect = 8.4 Identities = 62/76 (81%) Strand = Plus / Plus Query: 32 tgaggcaacactctgccaaacagggctgcctgttagtccgtcagtcattttttcacaaca 91 ||||||| ||||| || || ||||| ||||| ||||| | || ||||| || ||||||| Sbjct: 760 tgaggcagcactcagctaagcagggttgcctattagtaaggcaatcattcttccacaaca 819 Query: 92 atccttcaaactttgt 107 ||||||| || ||||| Sbjct: 820 atccttccaattttgt 835
>ref|NM_122111.2| Arabidopsis thaliana unknown protein AT5G21030 mRNA, complete cds Length = 2553 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/59 (88%) Strand = Plus / Plus Query: 181 ctcaatattgatgtttctaccacaatgattgtgaaacctggacctgttgttgattttct 239 ||||||||||||||||| || | ||||| || |||||||| ||||||||||||||||| Sbjct: 697 ctcaatattgatgtttcgactgctatgatagtaaaacctggtcctgttgttgattttct 755
>gb|AY104211.1| Zea mays PCO124720 mRNA sequence Length = 2052 Score = 61.9 bits (31), Expect = 2e-06 Identities = 106/131 (80%) Strand = Plus / Plus Query: 490 tctggtgatttcccttgtataaatgttgggaaacctaagcggccaacgtattttcccatc 549 |||||||||||||| ||||||||| ||||| | ||||| ||||| |||||||| ||| Sbjct: 239 tctggtgatttcccctgtataaatacagggaaggcaaagcgcccaacatattttccaatc 298 Query: 550 gagctctgccagctggtgcctttgcaaaggtacaccaaatctttgagtaccctacaaaga 609 ||||| ||| ||| || || | ||||| ||||||||| ||||| ||| |||||||| Sbjct: 299 gagctatgctcgcttgttccgcttcaaagatacaccaaagctttgtctacgctacaaagg 358 Query: 610 tcatctcttgt 620 ||||| ||||| Sbjct: 359 tcatcccttgt 369
>ref|NM_128262.2| Arabidopsis thaliana AGO4 (ARGONAUTE 4) AT2G27040 (AGO4) mRNA, complete cds Length = 3166 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Plus Query: 13 cgggttattgatatcatattgaggcaaca 41 |||||| |||||||||||||||||||||| Sbjct: 794 cgggttcttgatatcatattgaggcaaca 822
>gb|AY051033.1| Arabidopsis thaliana putative argonaute AGO1 protein (At2g27040) mRNA, complete cds Length = 2806 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Plus Query: 13 cgggttattgatatcatattgaggcaaca 41 |||||| |||||||||||||||||||||| Sbjct: 664 cgggttcttgatatcatattgaggcaaca 692
>gb|AY035081.1| Arabidopsis thaliana putative Argonaute (AGO1) protein (At2g27040) mRNA, complete cds Length = 3171 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Plus Query: 13 cgggttattgatatcatattgaggcaaca 41 |||||| |||||||||||||||||||||| Sbjct: 794 cgggttcttgatatcatattgaggcaaca 822
>gb|AC005623.3| Arabidopsis thaliana chromosome 2 clone T20P8 map B68, complete sequence Length = 99345 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Minus Query: 13 cgggttattgatatcatattgaggcaaca 41 |||||| |||||||||||||||||||||| Sbjct: 40078 cgggttcttgatatcatattgaggcaaca 40050
>ref|NM_122122.2| Arabidopsis thaliana unknown protein AT5G21150 mRNA, complete cds Length = 3018 Score = 48.1 bits (24), Expect = 0.035 Identities = 36/40 (90%) Strand = Plus / Plus Query: 215 aacctggacctgttgttgattttctgctggccaaccagaa 254 ||||||||||||| |||||||| ||||| || |||||||| Sbjct: 907 aacctggacctgtagttgatttcctgcttgctaaccagaa 946
>gb|DQ068741.1| Picea glauca argonaute/Zwille-like protein mRNA, complete cds Length = 2880 Score = 48.1 bits (24), Expect = 0.035 Identities = 30/32 (93%) Strand = Plus / Plus Query: 163 acacagagtgggctttctctcaatattgatgt 194 |||||||||||||||||||| ||||| ||||| Sbjct: 865 acacagagtgggctttctcttaatatggatgt 896
>gb|AC140977.1| Arabidopsis thaliana chromosome 5 BAC F13M11 genomic sequence, complete sequence Length = 112600 Score = 48.1 bits (24), Expect = 0.035 Identities = 36/40 (90%) Strand = Plus / Minus Query: 215 aacctggacctgttgttgattttctgctggccaaccagaa 254 ||||||||||||| |||||||| ||||| || |||||||| Sbjct: 80297 aacctggacctgtagttgatttcctgcttgctaaccagaa 80258
>gb|AC069325.6|AC069325 Genomic Sequence For Arabidopsis thaliana Clone T10F18 From Chromosome V, complete sequence Length = 84413 Score = 48.1 bits (24), Expect = 0.035 Identities = 36/40 (90%) Strand = Plus / Minus Query: 215 aacctggacctgttgttgattttctgctggccaaccagaa 254 ||||||||||||| |||||||| ||||| || |||||||| Sbjct: 15382 aacctggacctgtagttgatttcctgcttgctaaccagaa 15343 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Plus Query: 205 atgattgtgaaacctggacctgttgttgattttct 239 ||||| || |||||||| ||||||||||||||||| Sbjct: 66741 atgatagtaaaacctggtcctgttgttgattttct 66775
>dbj|AK118258.1| Arabidopsis thaliana At5g21150 mRNA for putative zwille/pinhead, complete cds, clone: RAFL19-56-B01 Length = 3090 Score = 48.1 bits (24), Expect = 0.035 Identities = 36/40 (90%) Strand = Plus / Plus Query: 215 aacctggacctgttgttgattttctgctggccaaccagaa 254 ||||||||||||| |||||||| ||||| || |||||||| Sbjct: 907 aacctggacctgtagttgatttcctgcttgctaaccagaa 946
>gb|DQ321491.1| Nicotiana benthamiana AGO4-2 mRNA, partial cds Length = 2715 Score = 48.1 bits (24), Expect = 0.035 Identities = 78/96 (81%) Strand = Plus / Plus Query: 496 gatttcccttgtataaatgttgggaaacctaagcggccaacgtattttcccatcgagctc 555 ||||| ||||| || |||||||||||||| || || || || ||||| || |||||||| Sbjct: 1096 gatttgccttgcatcaatgttgggaaacccaaacgtcccacctatttccctatcgagcta 1155 Query: 556 tgccagctggtgcctttgcaaaggtacaccaaatct 591 ||| | ||||| | ||||||||||| || |||||| Sbjct: 1156 tgcaatttggtgtcattgcaaaggtatacaaaatct 1191
>gb|AF296834.1|F22D1 Arabidopsis thaliana BAC F22D1 Length = 96102 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Minus Query: 205 atgattgtgaaacctggacctgttgttgattttct 239 ||||| || |||||||| ||||||||||||||||| Sbjct: 86973 atgatagtaaaacctggtcctgttgttgattttct 86939
>gb|AC124972.41| Medicago truncatula clone mth2-24j4, complete sequence Length = 124069 Score = 44.1 bits (22), Expect = 0.54 Identities = 47/54 (87%), Gaps = 1/54 (1%) Strand = Plus / Minus Query: 2 caagaagcc-ttcgggttattgatatcatattgaggcaacactctgccaaacag 54 ||||||||| || ||||| ||||||| || ||||| ||||| |||||||||||| Sbjct: 70017 caagaagccattagggttcttgatattatcttgagacaacattctgccaaacag 69964
>gb|AC131455.5| Medicago truncatula clone mth1-42h9, complete sequence Length = 96063 Score = 44.1 bits (22), Expect = 0.54 Identities = 47/54 (87%), Gaps = 1/54 (1%) Strand = Plus / Plus Query: 2 caagaagcc-ttcgggttattgatatcatattgaggcaacactctgccaaacag 54 ||||||||| || ||||| ||||||| || ||||| ||||| |||||||||||| Sbjct: 83859 caagaagccattagggttcttgatattatcttgagacaacattctgccaaacag 83912
>gb|AC163199.8| Mus musculus 6 BAC RP23-333F8 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 233589 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 403 aggaatggtgggaatggtgaac 424 |||||||||||||||||||||| Sbjct: 218322 aggaatggtgggaatggtgaac 218301
>gb|AC119822.38| Mus musculus chromosome 13, clone RP23-202P22, complete sequence Length = 213736 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 170 gtgggctttctctcaatattg 190 ||||||||||||||||||||| Sbjct: 164449 gtgggctttctctcaatattg 164469
>gb|BT013764.1| Lycopersicon esculentum clone 132647R, mRNA sequence Length = 3104 Score = 42.1 bits (21), Expect = 2.1 Identities = 36/41 (87%) Strand = Plus / Plus Query: 490 tctggtgatttcccttgtataaatgttgggaaacctaagcg 530 |||| |||||| || || ||||||||||||||||| ||||| Sbjct: 1214 tctgctgatttaccctgcataaatgttgggaaaccaaagcg 1254
>emb|AL442203.12| Human DNA sequence from clone RP11-12I24 on chromosome 13 Contains the 5' end of a novel gene (contains KIAA0564 and FLJ21779) possible ortholog of RIKEN cDNA 1300010F03 gene, a lysyl-tRNA synthetase (KARS) pseudogene, a ribosomal protein S28 (RPS28) pseudogene and 2 CpG islands, complete sequence Length = 163511 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 386 tgttttccctcaagcaaagga 406 ||||||||||||||||||||| Sbjct: 151110 tgttttccctcaagcaaagga 151090
>emb|AL356313.15| Human DNA sequence from clone RP11-531P20 on chromosome 13 Contains a novel gene, complete sequence Length = 143957 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 195 ttctaccacaatgattgtgaa 215 ||||||||||||||||||||| Sbjct: 81918 ttctaccacaatgattgtgaa 81938
>gb|AC090241.9| Homo sapiens chromosome 18, clone RP11-687F6, complete sequence Length = 166194 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 302 tcaagaatttaaggataaaaa 322 ||||||||||||||||||||| Sbjct: 23004 tcaagaatttaaggataaaaa 22984
>gb|AC090373.11| Homo sapiens chromosome 18, clone RP11-776B3, complete sequence Length = 143456 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 302 tcaagaatttaaggataaaaa 322 ||||||||||||||||||||| Sbjct: 87629 tcaagaatttaaggataaaaa 87609
>gb|AC104882.30| Mus musculus chromosome 8, clone RP23-401L9, complete sequence Length = 209525 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 30 attgaggcaacactctgcca 49 |||||||||||||||||||| Sbjct: 175494 attgaggcaacactctgcca 175513
>emb|CT009734.9| Mouse DNA sequence from clone RP23-182E3 on chromosome 14, complete sequence Length = 202398 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 425 ctgaagcaatagaaatatct 444 |||||||||||||||||||| Sbjct: 48225 ctgaagcaatagaaatatct 48206
>gb|AC149304.11| Medicago truncatula clone mth2-76g4, complete sequence Length = 114831 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 aatccttcaaactttgtgga 110 |||||||||||||||||||| Sbjct: 53574 aatccttcaaactttgtgga 53555
>gb|AF536942.1| Barley mild mosaic virus segment RNA1, complete sequence Length = 7273 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 82 tttcacaacaatccttcaaa 101 |||||||||||||||||||| Sbjct: 1213 tttcacaacaatccttcaaa 1232
>emb|AL441923.9| Human DNA sequence from clone RP11-104D21 on chromosome Xp11.21-11.23 Contains a melanoma antigen pseudogene, a pseudogene similar to part of SAH (SA hypertension-associated homolog (rat)) and a the 3' end of a novel gene, complete sequence Length = 76656 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 177 ttctctcaatattgatgttt 196 |||||||||||||||||||| Sbjct: 57565 ttctctcaatattgatgttt 57546
>emb|AL354953.16| Human DNA sequence from clone RP11-181K3 on chromosome 1 Contains the 3' end of the LAMC1 for laminin, gamma 1 (formerly LAMB2), the LAMC2 gene for laminin, gamma 2 and the 3' end of the NMNAT2 gene for nicotinamide nucleotide adenylyltransferase 2, complete sequence Length = 164084 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 598 accctacaaagatcatctct 617 |||||||||||||||||||| Sbjct: 96592 accctacaaagatcatctct 96611
>emb|AL353731.15| Human DNA sequence from clone RP11-345K20 on chromosome 10 Contains the 5' end of the ANXA7 gene for annexin A7, a ribosomal protein L26 (RPL26) pseudogene, a novel gene (FLJ39565), the 3' end of the PPP3CB gene for protein phosphatase 3 (formerly 2B) catalytic subunit beta isoform (calcineurin A beta) and a CpG island, complete sequence Length = 76685 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 397 aagcaaaggaatggtgggaatggt 420 ||||||||||||| |||||||||| Sbjct: 18089 aagcaaaggaatgctgggaatggt 18066
>gb|AC092898.15| Homo sapiens 3 BAC RP11-321A2 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 122934 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 81 ttttcacaacaatccttcaa 100 |||||||||||||||||||| Sbjct: 54609 ttttcacaacaatccttcaa 54628
>emb|CR382139.1| Debaryomyces hansenii chromosome G of strain CBS767 of Debaryomyces hansenii Length = 2051428 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 444 tgtgtatgattactttgtga 463 |||||||||||||||||||| Sbjct: 1981250 tgtgtatgattactttgtga 1981231
>emb|AL929108.5| Zebrafish DNA sequence from clone CH211-239J9 in linkage group 6 Contains the 3' part of a novel gene similar to human and mouse SPAG1 (sperm associated antigen 1), a novel gene similar to human and mouse COX6C (cytochrome c oxidase, subunit VIc), a novel gene, a novel gene similar to mouse and human MBC2 (membrane bound C2 domain containing protein), a novel gene similar to vertebrate ITGB4BP (integrin beta 4 binding protein), the 3' part of novel gene similar to vertebrate MMP24 (membrane-inserted matrix metalloproteinase 24) and two predicted CpG islands, complete sequence Length = 161277 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 373 tgttatgaacaaatgttttc 392 |||||||||||||||||||| Sbjct: 78055 tgttatgaacaaatgttttc 78074
>gb|AC083790.7| Homo sapiens chromosome 8, clone RP11-46B18, complete sequence Length = 98300 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 101 actttgtggacttgggtgga 120 |||||||||||||||||||| Sbjct: 22963 actttgtggacttgggtgga 22982
>gb|AC104582.3| Homo sapiens chromosome 8, clone RP11-1101K5, complete sequence Length = 186127 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 101 actttgtggacttgggtgga 120 |||||||||||||||||||| Sbjct: 66657 actttgtggacttgggtgga 66638
>emb|BX511233.10| Zebrafish DNA sequence from clone CH211-152P11 in linkage group 19, complete sequence Length = 193921 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 442 tctgtgtatgattactttgt 461 |||||||||||||||||||| Sbjct: 37201 tctgtgtatgattactttgt 37220
>gb|AC007500.7| Homo sapiens chromosome 16 clone RP11-545E2, complete sequence Length = 220562 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 101 actttgtggacttgggtggagggg 124 ||||||||| |||||||||||||| Sbjct: 190540 actttgtggtcttgggtggagggg 190563
>gb|AC131067.16| Mus musculus chromosome 1, clone RP23-383F8, complete sequence Length = 201908 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 403 aggaatggtgggaatggtga 422 |||||||||||||||||||| Sbjct: 165470 aggaatggtgggaatggtga 165489
>gb|AF170446.1|AF169632S2 Mus musculus prostate stromal protein ps20 (Wfdc1) gene, exons 2 through 7 and complete cds Length = 11141 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 30 attgaggcaacactctgcca 49 |||||||||||||||||||| Sbjct: 4508 attgaggcaacactctgcca 4527
>dbj|AP000837.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0424A08 Length = 151294 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 509 taaatgttgggaaacctaagcggccaac 536 ||||||||||||| || ||||||||||| Sbjct: 151058 taaatgttgggaagccaaagcggccaac 151031
>emb|AL049871.4|CNS0000U Human chromosome 14 DNA sequence BAC R-696D21 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 169650 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 379 gaacaaatgttttccctcaa 398 |||||||||||||||||||| Sbjct: 107222 gaacaaatgttttccctcaa 107241
>dbj|AP005363.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1653C10, complete sequence Length = 158682 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 101 actttgtggacttgggtgga 120 |||||||||||||||||||| Sbjct: 129442 actttgtggacttgggtgga 129461
>dbj|AK114586.1| Ciona intestinalis cDNA, clone:cieg007l24, full insert sequence Length = 1200 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 393 cctcaagcaaaggaatggtg 412 |||||||||||||||||||| Sbjct: 462 cctcaagcaaaggaatggtg 443
>gb|AC153560.5| Mus musculus 10 BAC RP23-376E10 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 183485 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 382 caaatgttttccctcaagca 401 |||||||||||||||||||| Sbjct: 68295 caaatgttttccctcaagca 68276
>emb|AJ544236.1|ATH544236 Arabidopsis thaliana mRNA for ARGONAUTE9 protein (At5g21150 gene) Length = 2897 Score = 40.1 bits (20), Expect = 8.4 Identities = 35/40 (87%) Strand = Plus / Plus Query: 215 aacctggacctgttgttgattttctgctggccaaccagaa 254 ||||||||||| | |||||||| ||||| || |||||||| Sbjct: 791 aacctggacctatagttgatttcctgcttgctaaccagaa 830 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,334,118 Number of Sequences: 3902068 Number of extensions: 6334118 Number of successful extensions: 117710 Number of sequences better than 10.0: 57 Number of HSP's better than 10.0 without gapping: 57 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 117498 Number of HSP's gapped (non-prelim): 209 length of query: 620 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 597 effective length of database: 17,143,297,704 effective search space: 10234548729288 effective search space used: 10234548729288 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
