| Clone Name | bags17p10 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_184993.1| Oryza sativa (japonica cultivar-group), mRNA Length = 786 Score = 458 bits (231), Expect = e-126 Identities = 357/399 (89%) Strand = Plus / Plus Query: 129 ccccatggccttcatgcgcacctcctccaatgcatcctctggcatgggagttgctcctga 188 ||||||||| |||||||| || ||||||||||||||| || ||||| ||||||||||| Sbjct: 42 ccccatggcgttcatgcgttcccactccaatgcatcctccggtatgggggttgctcctga 101 Query: 189 tatcagggagacattcctggagcttcagatgaagaaggcatttcgctatgttatcttcaa 248 |||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 102 catcagggacacattccttgagcttcagatgaagaaagcatttcgctatgttatcttcaa 161 Query: 249 gatagaagaaaagcaaaagcaggttgttgtggagaagacaggggctacaactgagagtta 308 || || |||||||||||||| ||||||||||||||||| ||||| |||||||||||||| Sbjct: 162 aatcgaggaaaagcaaaagcaagttgttgtggagaagaccggggcaacaactgagagtta 221 Query: 309 tgatgatttcctggcttgtctcccagagaacgactgcagatatgcgctttatgatcttga 368 ||||||||||||||| | ||||||||| || |||||||||||||| || |||||| |||| Sbjct: 222 tgatgatttcctggcatctctcccagaaaatgactgcagatatgccctctatgattttga 281 Query: 369 ctttgttactggggagaatgtgcagaaaagcaagattttcttcattgcctggtcccctga 428 |||||||||||||||||||||||| || ||||||||||||||||| |||||||| || Sbjct: 282 ctttgttactggggagaatgtgcaaaagagcaagattttcttcatcgcctggtctccatc 341 Query: 429 cacatcccgcatccgagccaagatgctgtactccacctccaaggaccgcatcaagcaaga 488 |||||||| ||||| || |||||||||||||||||||||||||| |||||||||||||| Sbjct: 342 aacatcccggatccgtgctaagatgctgtactccacctccaaggatcgcatcaagcaaga 401 Query: 489 gctcgacgggttccactacgagatccaggcaactgaccc 527 || || || ||||||||||||||||||||||| ||||| Sbjct: 402 acttgatggattccactacgagatccaggcaaccgaccc 440
>dbj|AK073162.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033024B06, full insert sequence Length = 954 Score = 458 bits (231), Expect = e-126 Identities = 357/399 (89%) Strand = Plus / Plus Query: 129 ccccatggccttcatgcgcacctcctccaatgcatcctctggcatgggagttgctcctga 188 ||||||||| |||||||| || ||||||||||||||| || ||||| ||||||||||| Sbjct: 210 ccccatggcgttcatgcgttcccactccaatgcatcctccggtatgggggttgctcctga 269 Query: 189 tatcagggagacattcctggagcttcagatgaagaaggcatttcgctatgttatcttcaa 248 |||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 270 catcagggacacattccttgagcttcagatgaagaaagcatttcgctatgttatcttcaa 329 Query: 249 gatagaagaaaagcaaaagcaggttgttgtggagaagacaggggctacaactgagagtta 308 || || |||||||||||||| ||||||||||||||||| ||||| |||||||||||||| Sbjct: 330 aatcgaggaaaagcaaaagcaagttgttgtggagaagaccggggcaacaactgagagtta 389 Query: 309 tgatgatttcctggcttgtctcccagagaacgactgcagatatgcgctttatgatcttga 368 ||||||||||||||| | ||||||||| || |||||||||||||| || |||||| |||| Sbjct: 390 tgatgatttcctggcatctctcccagaaaatgactgcagatatgccctctatgattttga 449 Query: 369 ctttgttactggggagaatgtgcagaaaagcaagattttcttcattgcctggtcccctga 428 |||||||||||||||||||||||| || ||||||||||||||||| |||||||| || Sbjct: 450 ctttgttactggggagaatgtgcaaaagagcaagattttcttcatcgcctggtctccatc 509 Query: 429 cacatcccgcatccgagccaagatgctgtactccacctccaaggaccgcatcaagcaaga 488 |||||||| ||||| || |||||||||||||||||||||||||| |||||||||||||| Sbjct: 510 aacatcccggatccgtgctaagatgctgtactccacctccaaggatcgcatcaagcaaga 569 Query: 489 gctcgacgggttccactacgagatccaggcaactgaccc 527 || || || ||||||||||||||||||||||| ||||| Sbjct: 570 acttgatggattccactacgagatccaggcaaccgaccc 608
>dbj|AK061347.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-303-F01, full insert sequence Length = 953 Score = 450 bits (227), Expect = e-123 Identities = 356/399 (89%) Strand = Plus / Plus Query: 129 ccccatggccttcatgcgcacctcctccaatgcatcctctggcatgggagttgctcctga 188 ||||||||| |||||||| || ||||||||||||||| || ||||| ||||||||||| Sbjct: 212 ccccatggcgttcatgcgttcccactccaatgcatcctccggtatgggggttgctcctga 271 Query: 189 tatcagggagacattcctggagcttcagatgaagaaggcatttcgctatgttatcttcaa 248 |||||||| |||| ||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 272 catcagggacacatcccttgagcttcagatgaagaaagcatttcgctatgttatcttcaa 331 Query: 249 gatagaagaaaagcaaaagcaggttgttgtggagaagacaggggctacaactgagagtta 308 || || |||||||||||||| ||||||||||||||||| ||||| |||||||||||||| Sbjct: 332 aatcgaggaaaagcaaaagcaagttgttgtggagaagaccggggcaacaactgagagtta 391 Query: 309 tgatgatttcctggcttgtctcccagagaacgactgcagatatgcgctttatgatcttga 368 ||||||||||||||| | ||||||||| || |||||||||||||| || |||||| |||| Sbjct: 392 tgatgatttcctggcatctctcccagaaaatgactgcagatatgccctctatgattttga 451 Query: 369 ctttgttactggggagaatgtgcagaaaagcaagattttcttcattgcctggtcccctga 428 |||||||||||||||||||||||| || ||||||||||||||||| |||||||| || Sbjct: 452 ctttgttactggggagaatgtgcaaaagagcaagattttcttcatcgcctggtctccatc 511 Query: 429 cacatcccgcatccgagccaagatgctgtactccacctccaaggaccgcatcaagcaaga 488 |||||||| ||||| || |||||||||||||||||||||||||| |||||||||||||| Sbjct: 512 aacatcccggatccgtgctaagatgctgtactccacctccaaggatcgcatcaagcaaga 571 Query: 489 gctcgacgggttccactacgagatccaggcaactgaccc 527 || || || ||||||||||||||||||||||| ||||| Sbjct: 572 acttgatggattccactacgagatccaggcaaccgaccc 610
>gb|AY103931.1| Zea mays PCO140521 mRNA sequence Length = 985 Score = 424 bits (214), Expect = e-115 Identities = 355/402 (88%) Strand = Plus / Plus Query: 126 cgaccccatggccttcatgcgcacctcctccaatgcatcctctggcatgggagttgctcc 185 |||||| ||||| ||||||||| || ||| |||||||| |||||||||||||||||||| Sbjct: 166 cgacccgatggctttcatgcgctcccgctcaaatgcatcttctggcatgggagttgctcc 225 Query: 186 tgatatcagggagacattcctggagcttcagatgaagaaggcatttcgctatgttatctt 245 | | || |||||||||||| | |||||||| |||||||||||||| || ||||||||||| Sbjct: 226 taacattagggagacattcgtcgagcttcaaatgaagaaggcattccgatatgttatctt 285 Query: 246 caagatagaagaaaagcaaaagcaggttgttgtggagaagacaggggctacaactgagag 305 ||| || ||||| |||||||||||||| ||||||||||||||||||||||| ||||| || Sbjct: 286 caaaatcgaagagaagcaaaagcaggtggttgtggagaagacaggggctactactgaaag 345 Query: 306 ttatgatgatttcctggcttgtctcccagagaacgactgcagatatgcgctttatgatct 365 |||||||| || |||| | |||||||||||| |||||| |||||||||| |||||| | Sbjct: 346 ctatgatgactttttggcctctctcccagagaatgactgccgatatgcgctgtatgattt 405 Query: 366 tgactttgttactggggagaatgtgcagaaaagcaagattttcttcattgcctggtcccc 425 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 406 tgattttgttactggggagaatgtgcagaaaagcaagattttcttcattgcctggtcccc 465 Query: 426 tgacacatcccgcatccgagccaagatgctgtactccacctccaaggaccgcatcaagca 485 ||||||||||| || || ||||||||||||||||| || ||||||||||||||| | Sbjct: 466 atcgacatcccgcatacgtgctaagatgctgtactccacgtcgaaggaccgcatcaagta 525 Query: 486 agagctcgacgggttccactacgagatccaggcaactgaccc 527 ||||| ||||||||||||||||| |||||||| || ||||| Sbjct: 526 cgagcttgacgggttccactacgaaatccaggcgaccgaccc 567
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 349 bits (176), Expect = 6e-93 Identities = 245/268 (91%) Strand = Plus / Minus Query: 154 tccaatgcatcctctggcatgggagttgctcctgatatcagggagacattcctggagctt 213 |||||||||||||| || ||||| ||||||||||| |||||||| |||||||| |||||| Sbjct: 32057887 tccaatgcatcctccggtatgggggttgctcctgacatcagggacacattccttgagctt 32057828 Query: 214 cagatgaagaaggcatttcgctatgttatcttcaagatagaagaaaagcaaaagcaggtt 273 ||||||||||| ||||||||||||||||||||||| || || |||||||||||||| ||| Sbjct: 32057827 cagatgaagaaagcatttcgctatgttatcttcaaaatcgaggaaaagcaaaagcaagtt 32057768 Query: 274 gttgtggagaagacaggggctacaactgagagttatgatgatttcctggcttgtctccca 333 |||||||||||||| ||||| ||||||||||||||||||||||||||||| | ||||||| Sbjct: 32057767 gttgtggagaagaccggggcaacaactgagagttatgatgatttcctggcatctctccca 32057708 Query: 334 gagaacgactgcagatatgcgctttatgatcttgactttgttactggggagaatgtgcag 393 || || |||||||||||||| || |||||| |||||||||||||||||||||||||||| Sbjct: 32057707 gaaaatgactgcagatatgccctctatgattttgactttgttactggggagaatgtgcaa 32057648 Query: 394 aaaagcaagattttcttcattgcctggt 421 || ||||||||||||||||| ||||||| Sbjct: 32057647 aagagcaagattttcttcatcgcctggt 32057620 Score = 123 bits (62), Expect = 6e-25 Identities = 89/98 (90%) Strand = Plus / Minus Query: 430 acatcccgcatccgagccaagatgctgtactccacctccaaggaccgcatcaagcaagag 489 |||||||| ||||| || |||||||||||||||||||||||||| |||||||||||||| Sbjct: 32057237 acatcccggatccgtgctaagatgctgtactccacctccaaggatcgcatcaagcaagaa 32057178 Query: 490 ctcgacgggttccactacgagatccaggcaactgaccc 527 || || || ||||||||||||||||||||||| ||||| Sbjct: 32057177 cttgatggattccactacgagatccaggcaaccgaccc 32057140
>gb|AC084320.10| Oryza sativa chromosome 3 BAC OSJNBa0091J19 genomic sequence, complete sequence Length = 178158 Score = 349 bits (176), Expect = 6e-93 Identities = 245/268 (91%) Strand = Plus / Minus Query: 154 tccaatgcatcctctggcatgggagttgctcctgatatcagggagacattcctggagctt 213 |||||||||||||| || ||||| ||||||||||| |||||||| |||||||| |||||| Sbjct: 59012 tccaatgcatcctccggtatgggggttgctcctgacatcagggacacattccttgagctt 58953 Query: 214 cagatgaagaaggcatttcgctatgttatcttcaagatagaagaaaagcaaaagcaggtt 273 ||||||||||| ||||||||||||||||||||||| || || |||||||||||||| ||| Sbjct: 58952 cagatgaagaaagcatttcgctatgttatcttcaaaatcgaggaaaagcaaaagcaagtt 58893 Query: 274 gttgtggagaagacaggggctacaactgagagttatgatgatttcctggcttgtctccca 333 |||||||||||||| ||||| ||||||||||||||||||||||||||||| | ||||||| Sbjct: 58892 gttgtggagaagaccggggcaacaactgagagttatgatgatttcctggcatctctccca 58833 Query: 334 gagaacgactgcagatatgcgctttatgatcttgactttgttactggggagaatgtgcag 393 || || |||||||||||||| || |||||| |||||||||||||||||||||||||||| Sbjct: 58832 gaaaatgactgcagatatgccctctatgattttgactttgttactggggagaatgtgcaa 58773 Query: 394 aaaagcaagattttcttcattgcctggt 421 || ||||||||||||||||| ||||||| Sbjct: 58772 aagagcaagattttcttcatcgcctggt 58745 Score = 123 bits (62), Expect = 6e-25 Identities = 89/98 (90%) Strand = Plus / Minus Query: 430 acatcccgcatccgagccaagatgctgtactccacctccaaggaccgcatcaagcaagag 489 |||||||| ||||| || |||||||||||||||||||||||||| |||||||||||||| Sbjct: 58362 acatcccggatccgtgctaagatgctgtactccacctccaaggatcgcatcaagcaagaa 58303 Query: 490 ctcgacgggttccactacgagatccaggcaactgaccc 527 || || || ||||||||||||||||||||||| ||||| Sbjct: 58302 cttgatggattccactacgagatccaggcaaccgaccc 58265
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 349 bits (176), Expect = 6e-93 Identities = 245/268 (91%) Strand = Plus / Minus Query: 154 tccaatgcatcctctggcatgggagttgctcctgatatcagggagacattcctggagctt 213 |||||||||||||| || ||||| ||||||||||| |||||||| |||||||| |||||| Sbjct: 32148399 tccaatgcatcctccggtatgggggttgctcctgacatcagggacacattccttgagctt 32148340 Query: 214 cagatgaagaaggcatttcgctatgttatcttcaagatagaagaaaagcaaaagcaggtt 273 ||||||||||| ||||||||||||||||||||||| || || |||||||||||||| ||| Sbjct: 32148339 cagatgaagaaagcatttcgctatgttatcttcaaaatcgaggaaaagcaaaagcaagtt 32148280 Query: 274 gttgtggagaagacaggggctacaactgagagttatgatgatttcctggcttgtctccca 333 |||||||||||||| ||||| ||||||||||||||||||||||||||||| | ||||||| Sbjct: 32148279 gttgtggagaagaccggggcaacaactgagagttatgatgatttcctggcatctctccca 32148220 Query: 334 gagaacgactgcagatatgcgctttatgatcttgactttgttactggggagaatgtgcag 393 || || |||||||||||||| || |||||| |||||||||||||||||||||||||||| Sbjct: 32148219 gaaaatgactgcagatatgccctctatgattttgactttgttactggggagaatgtgcaa 32148160 Query: 394 aaaagcaagattttcttcattgcctggt 421 || ||||||||||||||||| ||||||| Sbjct: 32148159 aagagcaagattttcttcatcgcctggt 32148132 Score = 123 bits (62), Expect = 6e-25 Identities = 89/98 (90%) Strand = Plus / Minus Query: 430 acatcccgcatccgagccaagatgctgtactccacctccaaggaccgcatcaagcaagag 489 |||||||| ||||| || |||||||||||||||||||||||||| |||||||||||||| Sbjct: 32147749 acatcccggatccgtgctaagatgctgtactccacctccaaggatcgcatcaagcaagaa 32147690 Query: 490 ctcgacgggttccactacgagatccaggcaactgaccc 527 || || || ||||||||||||||||||||||| ||||| Sbjct: 32147689 cttgatggattccactacgagatccaggcaaccgaccc 32147652
>gb|BT019096.1| Zea mays clone Contig695.F mRNA sequence Length = 438 Score = 180 bits (91), Expect = 3e-42 Identities = 146/163 (89%), Gaps = 1/163 (0%) Strand = Plus / Plus Query: 365 ttgactttgttactggggagaatgtgcagaaaagcaagattttcttcattgcctggtccc 424 |||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 1 ttgattttgttactggggaga-tgtgcagaaaagcaagattttcttcattgcctggtccc 59 Query: 425 ctgacacatcccgcatccgagccaagatgctgtactccacctccaaggaccgcatcaagc 484 | ||||||||||| || || ||||||||||||||||| || ||||||||||||||| Sbjct: 60 catcgacatcccgcatacgtgctaagatgctgtactccacgtcaaaggaccgcatcaagt 119 Query: 485 aagagctcgacgggttccactacgagatccaggcaactgaccc 527 | ||||| ||||||||||||||||| |||||||| || ||||| Sbjct: 120 acgagcttgacgggttccactacgaaatccaggcgaccgaccc 162
>gb|AY081942.1| Nicotiana tabacum pollen specific actin-depolymerizing factor 2 (ADF2) mRNA, partial cds Length = 523 Score = 71.9 bits (36), Expect = 2e-09 Identities = 42/44 (95%) Strand = Plus / Plus Query: 391 cagaaaagcaagattttcttcattgcctggtcccctgacacatc 434 |||||||||||||||||||||||||| ||||| ||||||||||| Sbjct: 235 cagaaaagcaagattttcttcattgcttggtcacctgacacatc 278
>gb|AY485790.1| Capsicum annuum actin-depolymerizing factor mRNA, complete cds Length = 762 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 391 cagaaaagcaagattttcttcattgcctggtcccctgacac 431 |||||||||| |||||| |||||||| |||||||||||||| Sbjct: 310 cagaaaagcaggatttttttcattgcatggtcccctgacac 350 Score = 40.1 bits (20), Expect = 7.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 247 aagatagaagaaaagcaaaagcaggttgttgt 278 |||||||| || || ||||||||||||||||| Sbjct: 165 aagatagaggagaaacaaaagcaggttgttgt 196
>gb|DQ320313.1| Arachis hypogaea actin depolymerizing factor-like protein mRNA, complete cds Length = 650 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 394 aaaagcaagattttcttcattgcctggtcccctgacacatc 434 ||||||| ||||||||||||||| ||||| ||||||||||| Sbjct: 273 aaaagcaggattttcttcattgcttggtctcctgacacatc 313
>gb|BT013009.1| Lycopersicon esculentum clone 114245R, mRNA sequence Length = 793 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 391 cagaaaagcaagattttcttcattgcctggtcccctgacacatc 434 |||||||||| ||| || |||||||| ||||||||||||||||| Sbjct: 311 cagaaaagcaggatctttttcattgcatggtcccctgacacatc 354 Score = 40.1 bits (20), Expect = 7.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 244 ttcaagatagaagaaaagcaaaagcaggttgt 275 ||||||||||| || || |||||||||||||| Sbjct: 164 ttcaagatagaggagaaacaaaagcaggttgt 195
>gb|AY347804.1| Malus x domestica clone 17-6 actin-depolymerizing factor mRNA, partial cds Length = 281 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 391 cagaaaagcaagattttcttcattgcctggtcccctgacacatc 434 ||||||||| ||| ||||||||||||||||| ||||||||||| Sbjct: 175 cagaaaagccggatattcttcattgcctggtctcctgacacatc 218
>gb|AY081941.1| Nicotiana tabacum pollen specific actin-depolymerizing factor 1 (ADF1) mRNA, complete cds Length = 529 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 391 cagaaaagcaagattttcttcattgcctggtc 422 |||||||||||||||||||||||||| ||||| Sbjct: 251 cagaaaagcaagattttcttcattgcttggtc 282
>dbj|AP004970.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT30P03, TM0148, complete sequence Length = 106000 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 391 cagaaaagcaagattttcttcattgcctggt 421 |||||||||||||||||||||||||| |||| Sbjct: 37268 cagaaaagcaagattttcttcattgcatggt 37298
>ref|NM_125382.2| Arabidopsis thaliana ADF4 (ACTIN DEPOLYMERIZING FACTOR 4); actin binding AT5G59890 (ADF4) transcript variant AT5G59890.2 mRNA, complete cds Length = 807 Score = 52.0 bits (26), Expect = 0.002 Identities = 56/66 (84%) Strand = Plus / Plus Query: 356 tttatgatcttgactttgttactggggagaatgtgcagaaaagcaagattttcttcattg 415 |||||||| | |||||||| |||| |||||| ||||| ||||||||||||||||||| Sbjct: 277 tttatgatttcgactttgtcactgcagagaattgccagaagagcaagattttcttcattg 336 Query: 416 cctggt 421 | |||| Sbjct: 337 catggt 342
>ref|NM_180897.1| Arabidopsis thaliana ADF4 (ACTIN DEPOLYMERIZING FACTOR 4); actin binding AT5G59890 (ADF4) transcript variant AT5G59890.1 mRNA, complete cds Length = 854 Score = 52.0 bits (26), Expect = 0.002 Identities = 56/66 (84%) Strand = Plus / Plus Query: 356 tttatgatcttgactttgttactggggagaatgtgcagaaaagcaagattttcttcattg 415 |||||||| | |||||||| |||| |||||| ||||| ||||||||||||||||||| Sbjct: 324 tttatgatttcgactttgtcactgcagagaattgccagaagagcaagattttcttcattg 383 Query: 416 cctggt 421 | |||| Sbjct: 384 catggt 389
>gb|AY090336.1| Arabidopsis thaliana At1g05180/YUP8H12_21 mRNA, complete cds Length = 399 Score = 52.0 bits (26), Expect = 0.002 Identities = 56/66 (84%) Strand = Plus / Plus Query: 356 tttatgatcttgactttgttactggggagaatgtgcagaaaagcaagattttcttcattg 415 |||||||| | |||||||| |||| |||||| ||||| ||||||||||||||||||| Sbjct: 185 tttatgatttcgactttgtcactgcagagaattgccagaagagcaagattttcttcattg 244 Query: 416 cctggt 421 | |||| Sbjct: 245 catggt 250
>gb|DQ088156.1| Gossypium hirsutum actin depolymerizing factor (ADF1) mRNA, complete cds Length = 963 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 244 ttcaagatagaagaaaagcaaaagcaggttgttgtgga 281 |||||||| |||||||| |||||||| ||||||||||| Sbjct: 265 ttcaagattgaagaaaaacaaaagcaagttgttgtgga 302 Score = 40.1 bits (20), Expect = 7.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 403 attttcttcattgcctggtcccctgacacatc 434 ||||| |||||||||||||| ||||| ||||| Sbjct: 424 atttttttcattgcctggtctcctgatacatc 455
>gb|AY050460.1| Arabidopsis thaliana AT5g59890/mmn10_110 mRNA, complete cds Length = 734 Score = 52.0 bits (26), Expect = 0.002 Identities = 56/66 (84%) Strand = Plus / Plus Query: 356 tttatgatcttgactttgttactggggagaatgtgcagaaaagcaagattttcttcattg 415 |||||||| | |||||||| |||| |||||| ||||| ||||||||||||||||||| Sbjct: 276 tttatgatttcgactttgtcactgcagagaattgccagaagagcaagattttcttcattg 335 Query: 416 cctggt 421 | |||| Sbjct: 336 catggt 341
>gb|AY084757.1| Arabidopsis thaliana clone 11691 mRNA, complete sequence Length = 841 Score = 52.0 bits (26), Expect = 0.002 Identities = 56/66 (84%) Strand = Plus / Plus Query: 356 tttatgatcttgactttgttactggggagaatgtgcagaaaagcaagattttcttcattg 415 |||||||| | |||||||| |||| |||||| ||||| ||||||||||||||||||| Sbjct: 325 tttatgatttcgactttgtcactgcagagaattgccagaagagcaagattttcttcattg 384 Query: 416 cctggt 421 | |||| Sbjct: 385 catggt 390
>dbj|AB015475.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MMN10 Length = 84325 Score = 52.0 bits (26), Expect = 0.002 Identities = 56/66 (84%) Strand = Plus / Plus Query: 356 tttatgatcttgactttgttactggggagaatgtgcagaaaagcaagattttcttcattg 415 |||||||| | |||||||| |||| |||||| ||||| ||||||||||||||||||| Sbjct: 36758 tttatgatttcgactttgtcactgcagagaattgccagaagagcaagattttcttcattg 36817 Query: 416 cctggt 421 | |||| Sbjct: 36818 catggt 36823
>gb|AF102822.1|AF102822 Arabidopsis thaliana actin depolymerizing factor 4 (ADF4) mRNA, complete cds Length = 705 Score = 52.0 bits (26), Expect = 0.002 Identities = 56/66 (84%) Strand = Plus / Plus Query: 356 tttatgatcttgactttgttactggggagaatgtgcagaaaagcaagattttcttcattg 415 |||||||| | |||||||| |||| |||||| ||||| ||||||||||||||||||| Sbjct: 302 tttatgatttcgactttgtcactgcagagaattgccagaagagcaagattttcttcattg 361 Query: 416 cctggt 421 | |||| Sbjct: 362 catggt 367
>ref|XM_475079.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 399 Score = 48.1 bits (24), Expect = 0.031 Identities = 39/44 (88%) Strand = Plus / Plus Query: 391 cagaaaagcaagattttcttcattgcctggtcccctgacacatc 434 ||||| |||||||| ||||||||||| ||||| ||||| ||||| Sbjct: 220 cagaagagcaagatattcttcattgcatggtctcctgatacatc 263
>emb|Z14110.1|LLADF L.longiflorum mRNA for actin depolymerizing factor Length = 544 Score = 48.1 bits (24), Expect = 0.031 Identities = 39/44 (88%) Strand = Plus / Plus Query: 391 cagaaaagcaagattttcttcattgcctggtcccctgacacatc 434 ||||| |||||||| |||||||| ||||||| ||||||||||| Sbjct: 253 cagaagagcaagatcttcttcatctcctggtctcctgacacatc 296
>emb|X80820.1|ZMABP1F Z.mays ABP1 mRNA for actin-depolymerizing factor Length = 589 Score = 48.1 bits (24), Expect = 0.031 Identities = 69/84 (82%) Strand = Plus / Plus Query: 391 cagaaaagcaagattttcttcattgcctggtcccctgacacatcccgcatccgagccaag 450 ||||| |||||||| |||||| | |||||||||||||||| | |||| | | |||| Sbjct: 323 cagaagagcaagatcttcttcttctcctggtcccctgacactgcacgcaccaggagcaag 382 Query: 451 atgctgtactccacctccaaggac 474 ||||||||| ||| |||||||||| Sbjct: 383 atgctgtacgccagctccaaggac 406
>emb|X97725.1|ZMABP2 Z.mays ZmABP2 mRNA for actin depolymerizing factor Length = 546 Score = 48.1 bits (24), Expect = 0.031 Identities = 69/84 (82%) Strand = Plus / Plus Query: 391 cagaaaagcaagattttcttcattgcctggtcccctgacacatcccgcatccgagccaag 450 ||||| |||||||| |||||| | ||||||||||||| || | |||| ||| |||| Sbjct: 260 cagaagagcaagatcttcttcttctcctggtcccctgatactgcacgcacccggagcaag 319 Query: 451 atgctgtactccacctccaaggac 474 ||||||||| ||| |||||||||| Sbjct: 320 atgctgtacgccagctccaaggac 343
>gb|AF440310.1| Vitis vinifera actin depolymerizing factor (ADF) mRNA, complete cds Length = 665 Score = 48.1 bits (24), Expect = 0.031 Identities = 36/40 (90%) Strand = Plus / Plus Query: 391 cagaaaagcaagattttcttcattgcctggtcccctgaca 430 ||||| |||||||| ||||||||||| ||||| ||||||| Sbjct: 270 cagaagagcaagatattcttcattgcatggtctcctgaca 309
>dbj|AK102177.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033086L12, full insert sequence Length = 2402 Score = 48.1 bits (24), Expect = 0.031 Identities = 39/44 (88%) Strand = Plus / Plus Query: 391 cagaaaagcaagattttcttcattgcctggtcccctgacacatc 434 ||||| |||||||| ||||||||||| ||||| ||||| ||||| Sbjct: 2040 cagaagagcaagatattcttcattgcatggtctcctgatacatc 2083
>gb|AY104025.1| Zea mays PCO095832 mRNA sequence Length = 894 Score = 48.1 bits (24), Expect = 0.031 Identities = 69/84 (82%) Strand = Plus / Plus Query: 391 cagaaaagcaagattttcttcattgcctggtcccctgacacatcccgcatccgagccaag 450 ||||| |||||||| |||||| | |||||||||||||||| | |||| | | |||| Sbjct: 309 cagaagagcaagatcttcttcttctcctggtcccctgacactgcacgcaccaggagcaag 368 Query: 451 atgctgtactccacctccaaggac 474 ||||||||| ||| |||||||||| Sbjct: 369 atgctgtacgccagctccaaggac 392
>gb|DQ306754.1| Hevea brasiliensis isolate SSH25 mRNA sequence Length = 670 Score = 48.1 bits (24), Expect = 0.031 Identities = 54/64 (84%) Strand = Plus / Minus Query: 391 cagaaaagcaagattttcttcattgcctggtcccctgacacatcccgcatccgagccaag 450 ||||| |||||||| ||||||||| | ||||| ||| ||||| || |||||||||||| Sbjct: 355 cagaagagcaagatcttcttcattccatggtctccttcaacatctcgaatccgagccaag 296 Query: 451 atgc 454 |||| Sbjct: 295 atgc 292
>gb|AC027133.3| Oryza sativa (japonica cultivar-group) chromosome 12 clone OSJNBb0003F09, complete sequence Length = 159600 Score = 46.1 bits (23), Expect = 0.12 Identities = 47/55 (85%) Strand = Plus / Minus Query: 197 agacattcctggagcttcagatgaagaaggcatttcgctatgttatcttcaagat 251 ||||||| ||||||||||||| |||||| || |||||||| ||||||||||| Sbjct: 48082 agacatttctggagcttcagaggaagaaatcacaccgctatgtcatcttcaagat 48028
>gb|BT013236.1| Lycopersicon esculentum clone 134498R, mRNA sequence Length = 837 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 157 aatgcatcctctggcatgggagttgct 183 |||||||||||||||||||| |||||| Sbjct: 137 aatgcatcctctggcatgggggttgct 163
>gb|AY038062.1| Petunia x hybrida actin-depolymerizing factor 2 gene, complete cds Length = 6266 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Plus Query: 247 aagatagaagaaaagcaaaagcaggttgttgtgga 281 ||||| ||||| ||||||||| ||||||||||||| Sbjct: 5254 aagattgaagagaagcaaaaggaggttgttgtgga 5288
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 46.1 bits (23), Expect = 0.12 Identities = 47/55 (85%) Strand = Plus / Minus Query: 197 agacattcctggagcttcagatgaagaaggcatttcgctatgttatcttcaagat 251 ||||||| ||||||||||||| |||||| || |||||||| ||||||||||| Sbjct: 26923115 agacatttctggagcttcagaggaagaaatcacaccgctatgtcatcttcaagat 26923061
>gb|AF183904.1|AF183904 Petunia x hybrida actin-depolymerizing factor 2 (ADF2) mRNA, complete cds Length = 848 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Plus Query: 247 aagatagaagaaaagcaaaagcaggttgttgtgga 281 ||||| ||||| ||||||||| ||||||||||||| Sbjct: 166 aagattgaagagaagcaaaaggaggttgttgtgga 200 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 403 attttcttcattgcctggtcccctgacac 431 |||||||||||||| ||||| |||||||| Sbjct: 322 attttcttcattgcttggtctcctgacac 350
>dbj|AK121150.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023078I07, full insert sequence Length = 699 Score = 46.1 bits (23), Expect = 0.12 Identities = 47/55 (85%) Strand = Plus / Plus Query: 197 agacattcctggagcttcagatgaagaaggcatttcgctatgttatcttcaagat 251 ||||||| ||||||||||||| |||||| || |||||||| ||||||||||| Sbjct: 122 agacatttctggagcttcagaggaagaaatcacaccgctatgtcatcttcaagat 176
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 46.1 bits (23), Expect = 0.12 Identities = 47/55 (85%) Strand = Plus / Minus Query: 197 agacattcctggagcttcagatgaagaaggcatttcgctatgttatcttcaagat 251 ||||||| ||||||||||||| |||||| || |||||||| ||||||||||| Sbjct: 26851285 agacatttctggagcttcagaggaagaaatcacaccgctatgtcatcttcaagat 26851231
>emb|AL831803.4|CNS08CAG Oryza sativa chromosome 12, . BAC OSJNBb0016P08 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 142370 Score = 46.1 bits (23), Expect = 0.12 Identities = 47/55 (85%) Strand = Plus / Minus Query: 197 agacattcctggagcttcagatgaagaaggcatttcgctatgttatcttcaagat 251 ||||||| ||||||||||||| |||||| || |||||||| ||||||||||| Sbjct: 127082 agacatttctggagcttcagaggaagaaatcacaccgctatgtcatcttcaagat 127028
>gb|BT016543.1| Zea mays clone Contig376 mRNA sequence Length = 881 Score = 44.1 bits (22), Expect = 0.48 Identities = 67/82 (81%) Strand = Plus / Plus Query: 328 ctcccagagaacgactgcagatatgcgctttatgatcttgactttgttactggggagaat 387 ||||| ||||| |||||| |||| ||| | |||||| | ||||||||||||| ||| || Sbjct: 348 ctccctgagaatgactgccgatacgcgatctatgatttcgactttgttactgcagaggat 407 Query: 388 gtgcagaaaagcaagattttct 409 || ||||| |||| ||| |||| Sbjct: 408 gtccagaagagcaggatcttct 429
>emb|X97726.1|ZMABP3 Z.mays ZmABP3 mRNA for actin depolymerizing factor Length = 801 Score = 44.1 bits (22), Expect = 0.48 Identities = 67/82 (81%) Strand = Plus / Plus Query: 328 ctcccagagaacgactgcagatatgcgctttatgatcttgactttgttactggggagaat 387 ||||| ||||| |||||| |||| ||| | |||||| | ||||||||||||| ||| || Sbjct: 322 ctccctgagaatgactgccgatacgcgatctatgatttcgactttgttactgcagaggat 381 Query: 388 gtgcagaaaagcaagattttct 409 || ||||| |||| ||| |||| Sbjct: 382 gtccagaagagcaggatcttct 403
>gb|AY103749.1| Zea mays PCO115125 mRNA sequence Length = 965 Score = 44.1 bits (22), Expect = 0.48 Identities = 67/82 (81%) Strand = Plus / Plus Query: 328 ctcccagagaacgactgcagatatgcgctttatgatcttgactttgttactggggagaat 387 ||||| ||||| |||||| |||| ||| | |||||| | ||||||||||||| ||| || Sbjct: 371 ctccctgagaatgactgccgatacgcgatctatgatttcgactttgttactgcagaggat 430 Query: 388 gtgcagaaaagcaagattttct 409 || ||||| |||| ||| |||| Sbjct: 431 gtccagaagagcaggatcttct 452
>ref|NM_114469.2| Arabidopsis thaliana ADF2 (ACTIN DEPOLYMERIZING FACTOR 2); actin binding AT3G46000 (ADF2) mRNA, complete cds Length = 849 Score = 42.1 bits (21), Expect = 1.9 Identities = 36/41 (87%) Strand = Plus / Plus Query: 391 cagaaaagcaagattttcttcattgcctggtcccctgacac 431 ||||| |||||||| ||||||||||| ||||| || ||||| Sbjct: 408 cagaagagcaagatcttcttcattgcatggtctccggacac 448
>gb|AY813043.1| Schistosoma japonicum SJCHGC06678 protein mRNA, complete cds Length = 1190 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 228 atttcgctatgttatcttcaagata 252 |||||||||||||||||| |||||| Sbjct: 71 atttcgctatgttatcttgaagata 47
>gb|BT000377.1| Arabidopsis thaliana actin depolymerizing factor 2 (At3g46000) mRNA, complete cds Length = 446 Score = 42.1 bits (21), Expect = 1.9 Identities = 36/41 (87%) Strand = Plus / Plus Query: 391 cagaaaagcaagattttcttcattgcctggtcccctgacac 431 ||||| |||||||| ||||||||||| ||||| || ||||| Sbjct: 235 cagaagagcaagatcttcttcattgcatggtctccggacac 275
>gb|AC099543.2| Homo sapiens chromosome 3 clone RP11-554B20, complete sequence Length = 156107 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 147 cacctcctccaatgcatcctc 167 ||||||||||||||||||||| Sbjct: 97573 cacctcctccaatgcatcctc 97593
>gb|AY064660.1| Arabidopsis thaliana actin depolymerizing factor 2 (ADF2) (At3g46000; F16L2_210) mRNA, complete cds Length = 446 Score = 42.1 bits (21), Expect = 1.9 Identities = 36/41 (87%) Strand = Plus / Plus Query: 391 cagaaaagcaagattttcttcattgcctggtcccctgacac 431 ||||| |||||||| ||||||||||| ||||| || ||||| Sbjct: 235 cagaagagcaagatcttcttcattgcatggtctccggacac 275
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 105 agccgccgcccacctctgccccgac 129 |||||||||||| |||||||||||| Sbjct: 1390466 agccgccgcccagctctgccccgac 1390442
>gb|AF386925.1|AF386925 Arabidopsis thaliana actin depolymerizing factor 2 (F16L2_210) mRNA, complete cds Length = 805 Score = 42.1 bits (21), Expect = 1.9 Identities = 36/41 (87%) Strand = Plus / Plus Query: 391 cagaaaagcaagattttcttcattgcctggtcccctgacac 431 ||||| |||||||| ||||||||||| ||||| || ||||| Sbjct: 408 cagaagagcaagatcttcttcattgcatggtctccggacac 448
>gb|AF370482.1|AF370482 Arabidopsis thaliana actin depolymerizing factor 2; ADF2 (F16L2_210) mRNA, complete cds Length = 832 Score = 42.1 bits (21), Expect = 1.9 Identities = 36/41 (87%) Strand = Plus / Plus Query: 391 cagaaaagcaagattttcttcattgcctggtcccctgacac 431 ||||| |||||||| ||||||||||| ||||| || ||||| Sbjct: 408 cagaagagcaagatcttcttcattgcatggtctccggacac 448
>emb|BX823115.1|CNS0A784 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB90ZG04 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 757 Score = 42.1 bits (21), Expect = 1.9 Identities = 36/41 (87%) Strand = Plus / Plus Query: 391 cagaaaagcaagattttcttcattgcctggtcccctgacac 431 ||||| |||||||| ||||||||||| ||||| || ||||| Sbjct: 332 cagaagagcaagatcttcttcattgcatggtctccggacac 372
>gb|AF112887.1|AF112887 Populus x canescens actin depolymerizing factor mRNA, partial cds Length = 721 Score = 42.1 bits (21), Expect = 1.9 Identities = 45/53 (84%) Strand = Plus / Plus Query: 235 tatgttatcttcaagatagaagaaaagcaaaagcaggttgttgtggagaagac 287 ||||| |||||||| || || |||||| | ||| ||||||| ||||||||||| Sbjct: 84 tatgtgatcttcaaaattgatgaaaagaagaaggaggttgtggtggagaagac 136
>gb|AC137672.2| Homo sapiens chromosome 3 clone RP11-72I12, complete sequence Length = 150313 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 147 cacctcctccaatgcatcctc 167 ||||||||||||||||||||| Sbjct: 149114 cacctcctccaatgcatcctc 149094
>gb|U48939.1|ATU48939 Arabidopsis thaliana actin depolymerizing factor 2 (AtADF2) mRNA, complete cds Length = 808 Score = 42.1 bits (21), Expect = 1.9 Identities = 36/41 (87%) Strand = Plus / Plus Query: 391 cagaaaagcaagattttcttcattgcctggtcccctgacac 431 ||||| |||||||| ||||||||||| ||||| || ||||| Sbjct: 367 cagaagagcaagatcttcttcattgcatggtctccggacac 407
>ref|NM_001016034.2| Xenopus tropicalis hypothetical protein LOC548788 (LOC548788), mRNA Length = 1060 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 156 caatgcatcctctggcatgg 175 |||||||||||||||||||| Sbjct: 486 caatgcatcctctggcatgg 505
>gb|AC153638.4| Mus musculus 6 BAC RP23-416H6 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 171957 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 251 tagaagaaaagcaaaagcag 270 |||||||||||||||||||| Sbjct: 24884 tagaagaaaagcaaaagcag 24903
>gb|AC004763.1| Homo sapiens chromosome 5, P1 clone 854b11 (LBNL H44), complete sequence Length = 87050 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 258 aaagcaaaagcaggttgttgtgga 281 ||||||||||||||||||| |||| Sbjct: 51869 aaagcaaaagcaggttgttatgga 51892
>gb|AC154882.11| Mus musculus chromosome 3, clone RP24-187P10, complete sequence Length = 175586 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 265 aagcaggttgttgtggagaagaca 288 ||||||||||||| |||||||||| Sbjct: 142763 aagcaggttgttggggagaagaca 142740
>gb|AC145839.3| Microcebus murinus clone CH257-408H17, complete sequence Length = 172417 Score = 40.1 bits (20), Expect = 7.5 Identities = 29/32 (90%) Strand = Plus / Minus Query: 372 tgttactggggagaatgtgcagaaaagcaaga 403 |||||||||| | ||| ||||||||||||||| Sbjct: 159071 tgttactgggaacaatttgcagaaaagcaaga 159040
>ref|XM_712012.1| Candida albicans SC5314 hypothetical protein (CaO19_5302), mRNA Length = 1059 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 206 tggagcttcagatgaagaag 225 |||||||||||||||||||| Sbjct: 723 tggagcttcagatgaagaag 704
>ref|XM_711932.1| Candida albicans SC5314 hypothetical protein (CaO19_12761), mRNA Length = 876 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 206 tggagcttcagatgaagaag 225 |||||||||||||||||||| Sbjct: 540 tggagcttcagatgaagaag 521
>gb|AC142167.4| Mus musculus BAC clone RP24-117F4 from chromosome 3, complete sequence Length = 190937 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 314 atttcctggcttgtctccca 333 |||||||||||||||||||| Sbjct: 2300 atttcctggcttgtctccca 2319
>gb|AC123984.14| Mus musculus chromosome 8, clone RP23-78H21, complete sequence Length = 256723 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 257 aaaagcaaaagcaggttgtt 276 |||||||||||||||||||| Sbjct: 2049 aaaagcaaaagcaggttgtt 2068
>gb|AC121850.3| Mus musculus BAC clone RP24-92E18 from chromosome 3, complete sequence Length = 195731 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 314 atttcctggcttgtctccca 333 |||||||||||||||||||| Sbjct: 4460 atttcctggcttgtctccca 4441
>gb|AY428595.1| Helianthus annuus clone HA10-7 putative actin-depolymerizing factor 2 mRNA, complete cds Length = 670 Score = 40.1 bits (20), Expect = 7.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 397 agcaagattttcttcattgcctggtcccctga 428 |||| ||||||||||||||| ||||| ||||| Sbjct: 320 agcaggattttcttcattgcatggtctcctga 351
>gb|AC125132.4| Mus musculus BAC clone RP24-314B3 from chromosome 8, complete sequence Length = 190472 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 257 aaaagcaaaagcaggttgtt 276 |||||||||||||||||||| Sbjct: 87296 aaaagcaaaagcaggttgtt 87277
>gb|AC130205.3| Mus musculus BAC clone RP24-430C1 from chromosome 1, complete sequence Length = 165927 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 375 tactggggagaatgtgcagaaaag 398 |||||||||||||||| ||||||| Sbjct: 60500 tactggggagaatgtggagaaaag 60477
>ref|XM_663045.1| Cryptosporidium hominis TU502 RAD50 DNA repair protein-related (Chro.10270) partial mRNA Length = 1758 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 243 cttcaagatagaagaaaagcaaaa 266 ||||||||||||||||||| |||| Sbjct: 1317 cttcaagatagaagaaaagaaaaa 1340
>emb|AL049646.19|HSDJ568F9 Human DNA sequence from clone RP4-568F9 on chromosome 20 Contains the ZNF133 gene for zinc finger protein 133, three novel genes, the 3' end of the C20orf12 gene for chromosome 20 open reading frame 12 and two CpG islands, complete sequence Length = 155432 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 247 aagatagaagaaaagcaaaagcag 270 |||||||||||||||||| ||||| Sbjct: 139400 aagatagaagaaaagcaacagcag 139377
>ref|XM_628070.1| Cryptosporidium parvum Iowa II RAD50 (cgd1_2410), partial mRNA Length = 3186 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 243 cttcaagatagaagaaaagcaaaa 266 ||||||||||||||||||| |||| Sbjct: 1350 cttcaagatagaagaaaagaaaaa 1373
>gb|AC024950.3|AC024950 Mus musculus strain C57BL6/J chromosome 6 clone RP23-208N9, complete sequence Length = 182382 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 251 tagaagaaaagcaaaagcag 270 |||||||||||||||||||| Sbjct: 140112 tagaagaaaagcaaaagcag 140131
>gb|AE006470.1| Chlorobium tepidum TLS, complete genome Length = 2154946 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 133 atggccttcatgcgcacctc 152 |||||||||||||||||||| Sbjct: 134984 atggccttcatgcgcacctc 134965
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 95 atcgacgcggagccgccgcccacc 118 |||||||||||||||| ||||||| Sbjct: 1434582 atcgacgcggagccgctgcccacc 1434605
>gb|AC048346.13| Homo sapiens 3 BAC RP11-13L2 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 165544 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 404 ttttcttcattgcctggtcccctg 427 ||||||||||||||||||| |||| Sbjct: 51344 ttttcttcattgcctggtctcctg 51321
>gb|AF236068.1|AF236068 Elaeis guineensis clone FS1 actin depolymerizing factor mRNA, complete cds Length = 826 Score = 40.1 bits (20), Expect = 7.5 Identities = 50/60 (83%) Strand = Plus / Plus Query: 231 tcgctatgttatcttcaagatagaagaaaagcaaaagcaggttgttgtggagaagacagg 290 ||||||||| || |||| ||| || |||||| |||| ||||||| || ||||||||||| Sbjct: 188 tcgctatgtgatattcatgatcgacgaaaagaaaaaagaggttgtggtcgagaagacagg 247
>gb|AC002428.1|AC002428 Human BAC clone GS1-39E22 from 5q31, complete sequence Length = 143875 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 258 aaagcaaaagcaggttgttgtgga 281 ||||||||||||||||||| |||| Sbjct: 112012 aaagcaaaagcaggttgttatgga 112035
>emb|CR848120.2| Xenopus tropicalis finished cDNA, clone TGas105m16 Length = 1060 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 156 caatgcatcctctggcatgg 175 |||||||||||||||||||| Sbjct: 486 caatgcatcctctggcatgg 505
>gb|CP000102.1| Methanosphaera stadtmanae DSM 3091, complete genome Length = 1767403 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 248 agatagaagaaaagcaaaag 267 |||||||||||||||||||| Sbjct: 1718519 agatagaagaaaagcaaaag 1718500
>gb|DP000022.1| Microcebus murinus target 1 genomic scaffold Length = 1595145 Score = 40.1 bits (20), Expect = 7.5 Identities = 29/32 (90%) Strand = Plus / Minus Query: 372 tgttactggggagaatgtgcagaaaagcaaga 403 |||||||||| | ||| ||||||||||||||| Sbjct: 159071 tgttactgggaacaatttgcagaaaagcaaga 159040
>gb|AC024092.19| Homo sapiens 12p BAC RP11-712A21 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 171887 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 423 ccctgacacatcccgcatcc 442 |||||||||||||||||||| Sbjct: 49209 ccctgacacatcccgcatcc 49190 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,977,552 Number of Sequences: 3902068 Number of extensions: 4977552 Number of successful extensions: 102771 Number of sequences better than 10.0: 80 Number of HSP's better than 10.0 without gapping: 80 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 102414 Number of HSP's gapped (non-prelim): 345 length of query: 553 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 530 effective length of database: 17,143,297,704 effective search space: 9085947783120 effective search space used: 9085947783120 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)