ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags17p08 |
|---|---|
| Clone Library Name | barley_pub |
>SERB_ARATH (O82796) Phosphoserine phosphatase, chloroplast precursor (EC| 3.1.3.3) (PSP) (O-phosphoserine phosphohydrolase) (PSPase) Length = 295 Score = 163 bits (413), Expect = 3e-40 Identities = 76/105 (72%), Positives = 92/105 (87%) Frame = +1 Query: 319 NRQPSKEVLETWRSANAVCFDVDSTVCLDEGIDELADFCGAGQAVAEWTTKAMTGTVPFE 498 N PSKE+L+ WRS AVCFDVDSTVC+DEGIDELA+FCGAG+AVAEWT +AM G+VPFE Sbjct: 69 NIVPSKEILDLWRSVEAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFE 128 Query: 499 EALAARISLIKPSLSQVQDCLEKRPPRISPGIADLIKTLLANNTE 633 EALAAR+SL KPSLS+V++ L+KRPPR+SPGI +L+K L ANN + Sbjct: 129 EALAARLSLFKPSLSKVEEYLDKRPPRLSPGIEELVKKLRANNID 173
>SERB_RAT (Q5M819) Phosphoserine phosphatase (EC 3.1.3.3) (PSP)| (O-phosphoserine phosphohydrolase) (PSPase) Length = 225 Score = 104 bits (260), Expect = 2e-22 Identities = 51/99 (51%), Positives = 70/99 (70%) Frame = +1 Query: 337 EVLETWRSANAVCFDVDSTVCLDEGIDELADFCGAGQAVAEWTTKAMTGTVPFEEALAAR 516 E+ + + SA+AVCFDVDSTV +EGIDELA FCG AV+E T +AM G +PF++AL R Sbjct: 6 ELRKLFCSADAVCFDVDSTVIREEGIDELAKFCGVEAAVSEMTRRAMGGALPFKDALTER 65 Query: 517 ISLIKPSLSQVQDCLEKRPPRISPGIADLIKTLLANNTE 633 ++LI+PS QVQ L + PP ++PGI +L+ L N + Sbjct: 66 LALIQPSRDQVQRLLAEHPPHLTPGIRELVSRLQERNVQ 104
>SERB_MOUSE (Q99LS3) Phosphoserine phosphatase (EC 3.1.3.3) (PSP)| (O-phosphoserine phosphohydrolase) (PSPase) Length = 225 Score = 104 bits (260), Expect = 2e-22 Identities = 51/99 (51%), Positives = 70/99 (70%) Frame = +1 Query: 337 EVLETWRSANAVCFDVDSTVCLDEGIDELADFCGAGQAVAEWTTKAMTGTVPFEEALAAR 516 E+ + + SA+AVCFDVDSTV +EGIDELA FCG AV+E T +AM G +PF++AL R Sbjct: 6 ELRKLFCSADAVCFDVDSTVIREEGIDELAKFCGVEAAVSEMTRRAMGGALPFKDALTQR 65 Query: 517 ISLIKPSLSQVQDCLEKRPPRISPGIADLIKTLLANNTE 633 ++LI+PS QVQ L + PP ++PGI +L+ L N + Sbjct: 66 LALIQPSRDQVQRLLAEHPPHLTPGIRELVSRLQERNVQ 104
>SERB_PONPY (Q5RB83) Phosphoserine phosphatase (EC 3.1.3.3) (PSP)| (O-phosphoserine phosphohydrolase) (PSPase) Length = 225 Score = 102 bits (255), Expect = 7e-22 Identities = 50/99 (50%), Positives = 69/99 (69%) Frame = +1 Query: 337 EVLETWRSANAVCFDVDSTVCLDEGIDELADFCGAGQAVAEWTTKAMTGTVPFEEALAAR 516 E+ + + SA+AVCFDVDSTV +EGIDELA CG AV+E T +AM G VPF+ AL R Sbjct: 6 ELRKLFYSADAVCFDVDSTVIREEGIDELAKICGVEDAVSEMTRRAMGGAVPFKAALTER 65 Query: 517 ISLIKPSLSQVQDCLEKRPPRISPGIADLIKTLLANNTE 633 ++LI+PS QVQ + ++PP ++PGI +L+ L N + Sbjct: 66 LALIQPSREQVQRLIAEQPPHLTPGIRELVSRLQERNVQ 104
>SERB_HUMAN (P78330) Phosphoserine phosphatase (EC 3.1.3.3) (PSP)| (O-phosphoserine phosphohydrolase) (PSPase) (L-3-phosphoserine phosphatase) Length = 225 Score = 102 bits (255), Expect = 7e-22 Identities = 50/99 (50%), Positives = 69/99 (69%) Frame = +1 Query: 337 EVLETWRSANAVCFDVDSTVCLDEGIDELADFCGAGQAVAEWTTKAMTGTVPFEEALAAR 516 E+ + + SA+AVCFDVDSTV +EGIDELA CG AV+E T +AM G VPF+ AL R Sbjct: 6 ELRKLFYSADAVCFDVDSTVIREEGIDELAKICGVEDAVSEMTRRAMGGAVPFKAALTER 65 Query: 517 ISLIKPSLSQVQDCLEKRPPRISPGIADLIKTLLANNTE 633 ++LI+PS QVQ + ++PP ++PGI +L+ L N + Sbjct: 66 LALIQPSREQVQRLIAEQPPHLTPGIRELVSRLQERNVQ 104
>SERB_DROME (Q9VSY6) Phosphoserine phosphatase (EC 3.1.3.3) (PSP)| (O-phosphoserine phosphohydrolase) (PSPase) Length = 270 Score = 85.5 bits (210), Expect = 1e-16 Identities = 39/93 (41%), Positives = 61/93 (65%) Frame = +1 Query: 355 RSANAVCFDVDSTVCLDEGIDELADFCGAGQAVAEWTTKAMTGTVPFEEALAARISLIKP 534 + + VCFDVDSTV +EGIDELA++CG G VA T +AM G + F++AL R+++I+P Sbjct: 59 QQSQIVCFDVDSTVICEEGIDELAEYCGKGSEVARVTKEAMGGAMTFQDALKIRLNIIRP 118 Query: 535 SLSQVQDCLEKRPPRISPGIADLIKTLLANNTE 633 + QV+D +++RP +S + + L A + Sbjct: 119 TQQQVRDFIQERPSTLSKNVKRFVSHLKAEGKQ 151
>SERB_ARCFU (O28142) Phosphoserine phosphatase (EC 3.1.3.3) (PSP)| (O-phosphoserine phosphohydrolase) (PSPase) Length = 344 Score = 53.5 bits (127), Expect = 5e-07 Identities = 31/87 (35%), Positives = 51/87 (58%) Frame = +1 Query: 355 RSANAVCFDVDSTVCLDEGIDELADFCGAGQAVAEWTTKAMTGTVPFEEALAARISLIKP 534 R + FD+DST+ E IDELA G G V++ T +AM G + F+EAL R+ L+K Sbjct: 127 REKRLIVFDMDSTLVEAEIIDELAKEAGVGDEVSKLTERAMRGEIGFKEALEERVRLLKG 186 Query: 535 SLSQVQDCLEKRPPRISPGIADLIKTL 615 +V + + R +++ G +L+++L Sbjct: 187 LPVEVLERIYSR-IKLTEGAKELVRSL 212
>SERB_SHIFL (P0AGB2) Phosphoserine phosphatase (EC 3.1.3.3) (PSP)| (O-phosphoserine phosphohydrolase) (PSPase) Length = 322 Score = 50.8 bits (120), Expect = 3e-06 Identities = 28/87 (32%), Positives = 48/87 (55%) Frame = +1 Query: 355 RSANAVCFDVDSTVCLDEGIDELADFCGAGQAVAEWTTKAMTGTVPFEEALAARISLIKP 534 R+ + D+DST E IDE+A G G+ VAE T +AM G + F +L +R++ +K Sbjct: 108 RTPGLLVMDMDSTAIQIECIDEIAKLAGTGEMVAEVTERAMRGELDFTASLRSRVATLKG 167 Query: 535 SLSQVQDCLEKRPPRISPGIADLIKTL 615 + + + + + P + PG+ L+ L Sbjct: 168 ADANILQQVRENLP-LMPGLTQLVLKL 193
>SERB_ECOLI (P0AGB0) Phosphoserine phosphatase (EC 3.1.3.3) (PSP)| (O-phosphoserine phosphohydrolase) (PSPase) Length = 322 Score = 50.8 bits (120), Expect = 3e-06 Identities = 28/87 (32%), Positives = 48/87 (55%) Frame = +1 Query: 355 RSANAVCFDVDSTVCLDEGIDELADFCGAGQAVAEWTTKAMTGTVPFEEALAARISLIKP 534 R+ + D+DST E IDE+A G G+ VAE T +AM G + F +L +R++ +K Sbjct: 108 RTPGLLVMDMDSTAIQIECIDEIAKLAGTGEMVAEVTERAMRGELDFTASLRSRVATLKG 167 Query: 535 SLSQVQDCLEKRPPRISPGIADLIKTL 615 + + + + + P + PG+ L+ L Sbjct: 168 ADANILQQVRENLP-LMPGLTQLVLKL 193
>SERB_ECO57 (P0AGB1) Phosphoserine phosphatase (EC 3.1.3.3) (PSP)| (O-phosphoserine phosphohydrolase) (PSPase) Length = 322 Score = 50.8 bits (120), Expect = 3e-06 Identities = 28/87 (32%), Positives = 48/87 (55%) Frame = +1 Query: 355 RSANAVCFDVDSTVCLDEGIDELADFCGAGQAVAEWTTKAMTGTVPFEEALAARISLIKP 534 R+ + D+DST E IDE+A G G+ VAE T +AM G + F +L +R++ +K Sbjct: 108 RTPGLLVMDMDSTAIQIECIDEIAKLAGTGEMVAEVTERAMRGELDFTASLRSRVATLKG 167 Query: 535 SLSQVQDCLEKRPPRISPGIADLIKTL 615 + + + + + P + PG+ L+ L Sbjct: 168 ADANILQQVRENLP-LMPGLTQLVLKL 193
>SERB_HAEIN (P44997) Phosphoserine phosphatase (EC 3.1.3.3) (PSP)| (O-phosphoserine phosphohydrolase) (PSPase) Length = 314 Score = 49.7 bits (117), Expect = 7e-06 Identities = 28/85 (32%), Positives = 46/85 (54%) Frame = +1 Query: 361 ANAVCFDVDSTVCLDEGIDELADFCGAGQAVAEWTTKAMTGTVPFEEALAARISLIKPSL 540 A + D+DST E IDE+A G G+ V+ T AM G + FE++L R+ +K + Sbjct: 103 AGLLVMDMDSTAIQIECIDEIAKLAGVGELVSAITESAMRGELDFEQSLRCRVGTLKGAP 162 Query: 541 SQVQDCLEKRPPRISPGIADLIKTL 615 + + + P +S G+ + I+TL Sbjct: 163 ESILQQVRENLPLMS-GLVETIQTL 186
>SERB_METJA (Q58989) Phosphoserine phosphatase (EC 3.1.3.3) (PSP)| (O-phosphoserine phosphohydrolase) (PSPase) Length = 211 Score = 48.1 bits (113), Expect = 2e-05 Identities = 29/83 (34%), Positives = 49/83 (59%), Gaps = 1/83 (1%) Frame = +1 Query: 370 VCFDVDSTVCLDEGIDELADFCGAGQAVAEWTTKAMTGTVPFEEALAARISLIKP-SLSQ 546 + FD DST+ +E IDE+A G + V + T +AM G + FE++L R+SL+K + + Sbjct: 8 ILFDFDSTLVNNETIDEIAREAGVEEEVKKITKEAMEGKLNFEQSLRKRVSLLKDLPIEK 67 Query: 547 VQDCLEKRPPRISPGIADLIKTL 615 V+ +++ P + G + IK L Sbjct: 68 VEKAIKRITP--TEGAEETIKEL 88
>SERB_SCHPO (O74382) Probable phosphoserine phosphatase (EC 3.1.3.3) (PSP)| (O-phosphoserine phosphohydrolase) (PSPase) Length = 298 Score = 47.4 bits (111), Expect = 4e-05 Identities = 25/54 (46%), Positives = 35/54 (64%) Frame = +1 Query: 370 VCFDVDSTVCLDEGIDELADFCGAGQAVAEWTTKAMTGTVPFEEALAARISLIK 531 V FD+DST+ E IDELA G + VA T+ AM G + F+E+L R+SL++ Sbjct: 79 VVFDMDSTLIQQECIDELAAEAGIQKEVATITSLAMNGEIDFQESLRRRVSLLQ 132
>SERB_YEAST (P42941) Phosphoserine phosphatase (EC 3.1.3.3) (PSP)| (O-phosphoserine phosphohydrolase) (PSPase) Length = 309 Score = 42.0 bits (97), Expect = 0.002 Identities = 25/84 (29%), Positives = 43/84 (51%) Frame = +1 Query: 376 FDVDSTVCLDEGIDELADFCGAGQAVAEWTTKAMTGTVPFEEALAARISLIKPSLSQVQD 555 FD+DST+ E I+ +A + G + V E T +AM + F+E+L R+ L++ Sbjct: 96 FDMDSTLIYQEVIELIAAYAGVEEQVHEITERAMNNELDFKESLRERVKLLQGLQVDTLY 155 Query: 556 CLEKRPPRISPGIADLIKTLLANN 627 K+ ++ G+ +L K L N Sbjct: 156 DEIKQKLEVTKGVPELCKFLHKKN 179
>RNH_IDILO (Q5QZL3) Ribonuclease H (EC 3.1.26.4) (RNase H)| Length = 157 Score = 31.6 bits (70), Expect = 2.0 Identities = 14/42 (33%), Positives = 17/42 (40%), Gaps = 5/42 (11%) Frame = -3 Query: 334 WKAGGWRNK-----KKRGAWXXXXXXXPRHELERAWYKGRVG 224 WK GWR K + W RH++E W KG G Sbjct: 87 WKQNGWRTSARKAVKNKDLWQQLDEEVNRHKVEWKWIKGHSG 128
>RNH_PSEAE (Q9I2S9) Ribonuclease HI (EC 3.1.26.4) (RNase HI)| Length = 148 Score = 31.2 bits (69), Expect = 2.7 Identities = 13/44 (29%), Positives = 18/44 (40%), Gaps = 5/44 (11%) Frame = -3 Query: 340 PLWKAGGWRNKKKRGA-----WXXXXXXXPRHELERAWYKGRVG 224 P WK GW+ K+ W RH++E W +G G Sbjct: 85 PNWKKRGWKTASKQPVKNADLWQALDEQVARHQVEWQWVRGHTG 128
>SNRK_RAT (Q63553) SNF-related serine/threonine-protein kinase (EC 2.7.11.1)| (SNF1-related kinase) Length = 746 Score = 31.2 bits (69), Expect = 2.7 Identities = 17/46 (36%), Positives = 24/46 (52%) Frame = +1 Query: 481 GTVPFEEALAARISLIKPSLSQVQDCLEKRPPRISPGIADLIKTLL 618 G PF+EA + +L+ + DC PPR+S G DLI +L Sbjct: 211 GQPPFQEANDSE------TLTMIMDCKYTVPPRVSAGCRDLITRML 250
>RDRP_PVMR (P17965) RNA replication protein (147 kDa protein) (ORF 1 protein)| [Includes: RNA-directed RNA polymerase (EC 2.7.7.48); Helicase (EC 3.6.1.-)] Length = 1968 Score = 31.2 bits (69), Expect = 2.7 Identities = 19/50 (38%), Positives = 27/50 (54%) Frame = +1 Query: 352 WRSANAVCFDVDSTVCLDEGIDELADFCGAGQAVAEWTTKAMTGTVPFEE 501 W ++ A FD D+ V + E +D L GAG VA T++ GTVP + Sbjct: 438 WENSYAWFFDTDAEVDVPEKLDSLFMGEGAG-LVAHITSRPYVGTVPLAD 486
>SOMA_MISMI (Q9W6J5) Somatotropin precursor (Growth hormone)| Length = 210 Score = 31.2 bits (69), Expect = 2.7 Identities = 18/61 (29%), Positives = 23/61 (37%) Frame = -2 Query: 383 TSKHTALALRHVSRTSLEGWRLAKQEEEGCLVTSIXXXXXXXXRESLVQGKSGFVVLIAN 204 T K + L L +S +E W Q G + S+ E L K G VLI Sbjct: 85 TQKSSVLKLLRISFRLIESWEYPSQTLSGTISNSLTIGNPSQITEKLADLKVGISVLIKG 144 Query: 203 C 201 C Sbjct: 145 C 145
>RNH_VIBCH (Q9KPX8) Ribonuclease HI (EC 3.1.26.4) (RNase HI)| Length = 156 Score = 31.2 bits (69), Expect = 2.7 Identities = 13/42 (30%), Positives = 17/42 (40%), Gaps = 5/42 (11%) Frame = -3 Query: 334 WKAGGWRNKKKRGA-----WXXXXXXXPRHELERAWYKGRVG 224 WK GW+ K+ W RH++E W KG G Sbjct: 85 WKLRGWKTADKKPVKNADLWQALDKETARHQVEWRWVKGHAG 126
>SNRK_MOUSE (Q8VDU5) SNF-related serine/threonine-protein kinase (EC 2.7.11.1)| (SNF1-related kinase) Length = 748 Score = 31.2 bits (69), Expect = 2.7 Identities = 17/46 (36%), Positives = 24/46 (52%) Frame = +1 Query: 481 GTVPFEEALAARISLIKPSLSQVQDCLEKRPPRISPGIADLIKTLL 618 G PF+EA + +L+ + DC PPR+S G DLI +L Sbjct: 211 GQPPFQEANDSE------TLTMIMDCKYTVPPRVSAGCRDLITRML 250
>RNH_CAUCR (Q9A341) Ribonuclease HI (EC 3.1.26.4) (RNase HI)| Length = 149 Score = 30.8 bits (68), Expect = 3.5 Identities = 13/42 (30%), Positives = 17/42 (40%), Gaps = 5/42 (11%) Frame = -3 Query: 334 WKAGGWRNKKKRGA-----WXXXXXXXPRHELERAWYKGRVG 224 WKA GW+ K W RH+++ W KG G Sbjct: 85 WKARGWKTADKSPVKNDDLWKRLDAARARHDVDWRWVKGHAG 126
>SOMA_HYPNO (P69160) Somatotropin precursor (Growth hormone)| Length = 210 Score = 30.8 bits (68), Expect = 3.5 Identities = 18/61 (29%), Positives = 23/61 (37%) Frame = -2 Query: 383 TSKHTALALRHVSRTSLEGWRLAKQEEEGCLVTSIXXXXXXXXRESLVQGKSGFVVLIAN 204 T K + L L +S +E W Q G + S+ E L K G VLI Sbjct: 85 TQKSSMLKLLRISFRLIESWEFPSQTLSGAVSNSLTVGNPNQITEKLADLKVGISVLIKG 144 Query: 203 C 201 C Sbjct: 145 C 145
>SOMA_HYPMO (P69159) Somatotropin precursor (Growth hormone)| Length = 210 Score = 30.8 bits (68), Expect = 3.5 Identities = 18/61 (29%), Positives = 23/61 (37%) Frame = -2 Query: 383 TSKHTALALRHVSRTSLEGWRLAKQEEEGCLVTSIXXXXXXXXRESLVQGKSGFVVLIAN 204 T K + L L +S +E W Q G + S+ E L K G VLI Sbjct: 85 TQKSSMLKLLRISFRLIESWEFPSQTLSGAVSNSLTVGNPNQITEKLADLKVGISVLIKG 144 Query: 203 C 201 C Sbjct: 145 C 145
>SOMA_CTEID (P69158) Somatotropin precursor (Growth hormone)| Length = 210 Score = 30.8 bits (68), Expect = 3.5 Identities = 18/61 (29%), Positives = 23/61 (37%) Frame = -2 Query: 383 TSKHTALALRHVSRTSLEGWRLAKQEEEGCLVTSIXXXXXXXXRESLVQGKSGFVVLIAN 204 T K + L L +S +E W Q G + S+ E L K G VLI Sbjct: 85 TQKSSMLKLLRISFRLIESWEFPSQTLSGAVSNSLTVGNPNQITEKLADLKVGISVLIKG 144 Query: 203 C 201 C Sbjct: 145 C 145
>PHK2_ANASP (Q8YTZ6) Probable phosphoketolase 2 (EC 4.1.2.-)| Length = 793 Score = 30.8 bits (68), Expect = 3.5 Identities = 14/22 (63%), Positives = 15/22 (68%) Frame = +3 Query: 513 PDFVNQAISVPSPGLLGEEATQ 578 PDF N AI VP PG + EATQ Sbjct: 381 PDFQNYAIEVPQPGRVMAEATQ 402
>RNH_XANCP (Q8PBX8) Ribonuclease H (EC 3.1.26.4) (RNase H)| Length = 150 Score = 30.4 bits (67), Expect = 4.6 Identities = 13/37 (35%), Positives = 14/37 (37%) Frame = -3 Query: 334 WKAGGWRNKKKRGAWXXXXXXXPRHELERAWYKGRVG 224 WK G K R W RH +E W KG G Sbjct: 89 WKTSGGDPVKNRELWERLHAATQRHSIEWRWVKGHNG 125
>PKNJ_MYCTU (P65732) Probable serine/threonine-protein kinase pknJ (EC| 2.7.11.1) Length = 589 Score = 30.4 bits (67), Expect = 4.6 Identities = 20/78 (25%), Positives = 34/78 (43%) Frame = +1 Query: 394 VCLDEGIDELADFCGAGQAVAEWTTKAMTGTVPFEEALAARISLIKPSLSQVQDCLEKRP 573 V +G D AD G A+ + +TG PF A ++++ L Q + R Sbjct: 187 VLAGQGFDGRADLYSLGCALF----RLLTGEAPFAAGAGAAVAVVAGHLHQPPPTVSDRV 242 Query: 574 PRISPGIADLIKTLLANN 627 P +S + +I T +A + Sbjct: 243 PGLSAAMDAVIATAMAKD 260
>PKNJ_MYCBO (P65733) Probable serine/threonine-protein kinase pknJ (EC| 2.7.11.1) Length = 589 Score = 30.4 bits (67), Expect = 4.6 Identities = 20/78 (25%), Positives = 34/78 (43%) Frame = +1 Query: 394 VCLDEGIDELADFCGAGQAVAEWTTKAMTGTVPFEEALAARISLIKPSLSQVQDCLEKRP 573 V +G D AD G A+ + +TG PF A ++++ L Q + R Sbjct: 187 VLAGQGFDGRADLYSLGCALF----RLLTGEAPFAAGAGAAVAVVAGHLHQPPPTVSDRV 242 Query: 574 PRISPGIADLIKTLLANN 627 P +S + +I T +A + Sbjct: 243 PGLSAAMDAVIATAMAKD 260
>SOMA1_CARAU (O93359) Somatotropin-1 precursor (Somatotropin I) (Growth hormone| I) Length = 210 Score = 30.4 bits (67), Expect = 4.6 Identities = 19/61 (31%), Positives = 23/61 (37%) Frame = -2 Query: 383 TSKHTALALRHVSRTSLEGWRLAKQEEEGCLVTSIXXXXXXXXRESLVQGKSGFVVLIAN 204 T K + L L VS +E W Q G + S+ E L K G VLI Sbjct: 85 TQKSSMLKLLRVSFRLIESWEFPSQTLSGTVSNSLTVGNPNQITEKLADLKMGISVLIQA 144 Query: 203 C 201 C Sbjct: 145 C 145
>SSH2_HUMAN (Q76I76) Protein phosphatase Slingshot homolog 2 (EC 3.1.3.48) (EC| 3.1.3.16) (SSH-2L) (hSSH-2L) Length = 1423 Score = 30.0 bits (66), Expect = 6.0 Identities = 21/75 (28%), Positives = 33/75 (44%), Gaps = 2/75 (2%) Frame = -3 Query: 586 EKSWVASSPSSPGLGTEMA*LTKSGQQ--EPLQMERXXXXXXXXXXXXXXXPHRNQQAHL 413 E + + +SP+ G G+E+A KSG+Q + ME+ NQ + Sbjct: 1013 EYTHIVTSPNHTGPGSEIATSEKSGEQGLRKVNMEKSVTVLCTLDENLNRTLDPNQ---V 1069 Query: 412 YPHPSIQCYPHQSTP 368 HP + PH S+P Sbjct: 1070 SLHPQVLPLPHSSSP 1084
>SOMA_CYPCA (P10298) Somatotropin precursor (Growth hormone)| Length = 210 Score = 30.0 bits (66), Expect = 6.0 Identities = 18/61 (29%), Positives = 23/61 (37%) Frame = -2 Query: 383 TSKHTALALRHVSRTSLEGWRLAKQEEEGCLVTSIXXXXXXXXRESLVQGKSGFVVLIAN 204 T K + L L +S +E W Q G + S+ E L K G VLI Sbjct: 85 TQKSSMLKLLRISFHLIESWEFPSQSLSGTVSNSLTVGNPNQLTEKLADLKMGISVLIQA 144 Query: 203 C 201 C Sbjct: 145 C 145
>MPGP_AERPE (Q9YDM7) Mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70)| (MPGP) Length = 281 Score = 30.0 bits (66), Expect = 6.0 Identities = 20/57 (35%), Positives = 31/57 (54%), Gaps = 2/57 (3%) Frame = +1 Query: 400 LDEGIDELADFCGAGQAVAEWTTKA--MTGTVPFEEALAARISLIKPSLSQVQDCLE 564 +D +D LA+ CGA + T+A +TG ALAAR ++ S+ Q+CL+ Sbjct: 112 IDALLDSLAETCGAVRLSKADATEAQLITGLPRERAALAARREYLEVIWSRSQECLD 168
>RNH_NEIMB (Q9JYE5) Ribonuclease HI (EC 3.1.26.4) (RNase HI)| Length = 145 Score = 29.6 bits (65), Expect = 7.8 Identities = 12/42 (28%), Positives = 16/42 (38%), Gaps = 5/42 (11%) Frame = -3 Query: 334 WKAGGWRNKKKRGA-----WXXXXXXXPRHELERAWYKGRVG 224 WK GW+ K+ W RH++ W KG G Sbjct: 85 WKRNGWKTASKQPVKNDDLWKELDALVGRHQVSWTWVKGHAG 126
>SL9A2_RAT (P48763) Sodium/hydrogen exchanger 2 (Na(+)/H(+) exchanger 2)| (NHE-2) (Solute carrier family 9 member 2) (H7) Length = 813 Score = 29.6 bits (65), Expect = 7.8 Identities = 15/44 (34%), Positives = 26/44 (59%) Frame = +1 Query: 496 EEALAARISLIKPSLSQVQDCLEKRPPRISPGIADLIKTLLANN 627 E A IS + PS + + DC E++ +++PG D I+ +L+ N Sbjct: 567 EMAETGMISTV-PSFASLNDCREEKIRKLTPGEMDEIREILSRN 609
>SL9A2_RABIT (P50482) Sodium/hydrogen exchanger 2 (Na(+)/H(+) exchanger 2)| (NHE-2) (Solute carrier family 9 member 2) Length = 809 Score = 29.6 bits (65), Expect = 7.8 Identities = 15/44 (34%), Positives = 26/44 (59%) Frame = +1 Query: 496 EEALAARISLIKPSLSQVQDCLEKRPPRISPGIADLIKTLLANN 627 E A IS + PS + + DC E++ +++PG D I+ +L+ N Sbjct: 566 EMAETGMISTV-PSFASLNDCREEKIRKLTPGEMDEIREILSRN 608
>RNH_VIBPA (Q87MG2) Ribonuclease HI (EC 3.1.26.4) (RNase HI)| Length = 154 Score = 29.6 bits (65), Expect = 7.8 Identities = 12/42 (28%), Positives = 17/42 (40%), Gaps = 5/42 (11%) Frame = -3 Query: 334 WKAGGWRNKKKRGA-----WXXXXXXXPRHELERAWYKGRVG 224 WK GW+ K+ W RH+++ W KG G Sbjct: 85 WKKRGWKTADKKPVKNADLWQALDKETARHQVDWHWVKGHAG 126 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 96,391,959 Number of Sequences: 219361 Number of extensions: 1951335 Number of successful extensions: 6063 Number of sequences better than 10.0: 37 Number of HSP's better than 10.0 without gapping: 5822 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6054 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5881538857 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
