ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags17p03 |
|---|---|
| Clone Library Name | barley_pub |
>UBC2_WHEAT (P25866) Ubiquitin-conjugating enzyme E2-17 kDa (EC 6.3.2.19)| (Ubiquitin-protein ligase) (Ubiquitin carrier protein) Length = 152 Score = 50.8 bits (120), Expect = 1e-06 Identities = 23/24 (95%), Positives = 23/24 (95%) Frame = +2 Query: 50 MSTPARKRLMRDFKRLQQDPPXGI 121 MSTPARKRLMRDFKRLQQDPP GI Sbjct: 1 MSTPARKRLMRDFKRLQQDPPAGI 24
>UBC2_ARATH (P42745) Ubiquitin-conjugating enzyme E2-17 kDa 2 (EC 6.3.2.19)| (Ubiquitin-protein ligase 2) (Ubiquitin carrier protein 2) Length = 152 Score = 50.8 bits (120), Expect = 1e-06 Identities = 23/24 (95%), Positives = 23/24 (95%) Frame = +2 Query: 50 MSTPARKRLMRDFKRLQQDPPXGI 121 MSTPARKRLMRDFKRLQQDPP GI Sbjct: 1 MSTPARKRLMRDFKRLQQDPPAGI 24
>UBC1_ARATH (P25865) Ubiquitin-conjugating enzyme E2-17 kDa 1 (EC 6.3.2.19)| (Ubiquitin-protein ligase 1) (Ubiquitin carrier protein 1) Length = 152 Score = 50.8 bits (120), Expect = 1e-06 Identities = 23/24 (95%), Positives = 23/24 (95%) Frame = +2 Query: 50 MSTPARKRLMRDFKRLQQDPPXGI 121 MSTPARKRLMRDFKRLQQDPP GI Sbjct: 1 MSTPARKRLMRDFKRLQQDPPAGI 24
>UBC2_MEDSA (P35130) Ubiquitin-conjugating enzyme E2-17 kDa (EC 6.3.2.19)| (Ubiquitin-protein ligase) (Ubiquitin carrier protein) Length = 152 Score = 48.9 bits (115), Expect = 4e-06 Identities = 22/24 (91%), Positives = 22/24 (91%) Frame = +2 Query: 50 MSTPARKRLMRDFKRLQQDPPXGI 121 MSTPARKRLMRDFKRLQ DPP GI Sbjct: 1 MSTPARKRLMRDFKRLQHDPPAGI 24
>UBC2_CANAL (O74201) Ubiquitin-conjugating enzyme E2 2 (EC 6.3.2.19)| (Ubiquitin-protein ligase UBC2) (Ubiquitin carrier protein UBC2) (Radiation sensitivity protein 6) Length = 179 Score = 48.5 bits (114), Expect = 5e-06 Identities = 20/24 (83%), Positives = 23/24 (95%) Frame = +2 Query: 50 MSTPARKRLMRDFKRLQQDPPXGI 121 MSTPAR+RLMRDFKR+QQDPP G+ Sbjct: 1 MSTPARRRLMRDFKRMQQDPPSGV 24
>UBE2A_MOUSE (Q9Z255) Ubiquitin-conjugating enzyme E2 A (EC 6.3.2.19)| (Ubiquitin-protein ligase A) (Ubiquitin carrier protein A) (HR6A) (mHR6A) Length = 152 Score = 48.1 bits (113), Expect = 7e-06 Identities = 20/24 (83%), Positives = 23/24 (95%) Frame = +2 Query: 50 MSTPARKRLMRDFKRLQQDPPXGI 121 MSTPAR+RLMRDFKRLQ+DPP G+ Sbjct: 1 MSTPARRRLMRDFKRLQEDPPAGV 24
>UBE2A_HUMAN (P49459) Ubiquitin-conjugating enzyme E2 A (EC 6.3.2.19)| (Ubiquitin-protein ligase A) (Ubiquitin carrier protein A) (HR6A) (hHR6A) Length = 152 Score = 48.1 bits (113), Expect = 7e-06 Identities = 20/24 (83%), Positives = 23/24 (95%) Frame = +2 Query: 50 MSTPARKRLMRDFKRLQQDPPXGI 121 MSTPAR+RLMRDFKRLQ+DPP G+ Sbjct: 1 MSTPARRRLMRDFKRLQEDPPAGV 24
>UBCD6_DROME (P25153) Ubiquitin-conjugating enzyme E2-17 kDa (EC 6.3.2.19)| (Ubiquitin-protein ligase) (Ubiquitin carrier protein) Length = 151 Score = 48.1 bits (113), Expect = 7e-06 Identities = 20/24 (83%), Positives = 23/24 (95%) Frame = +2 Query: 50 MSTPARKRLMRDFKRLQQDPPXGI 121 MSTPAR+RLMRDFKRLQ+DPP G+ Sbjct: 1 MSTPARRRLMRDFKRLQEDPPTGV 24
>UBE2B_RAT (P63149) Ubiquitin-conjugating enzyme E2 B (EC 6.3.2.19)| (Ubiquitin-protein ligase B) (Ubiquitin carrier protein B) (HR6B) (E2(14k)) Length = 152 Score = 47.8 bits (112), Expect = 9e-06 Identities = 20/24 (83%), Positives = 23/24 (95%) Frame = +2 Query: 50 MSTPARKRLMRDFKRLQQDPPXGI 121 MSTPAR+RLMRDFKRLQ+DPP G+ Sbjct: 1 MSTPARRRLMRDFKRLQEDPPVGV 24
>UBE2B_RABIT (P63148) Ubiquitin-conjugating enzyme E2 B (EC 6.3.2.19)| (Ubiquitin-protein ligase B) (Ubiquitin carrier protein B) (HR6B) (E2(14k)) Length = 152 Score = 47.8 bits (112), Expect = 9e-06 Identities = 20/24 (83%), Positives = 23/24 (95%) Frame = +2 Query: 50 MSTPARKRLMRDFKRLQQDPPXGI 121 MSTPAR+RLMRDFKRLQ+DPP G+ Sbjct: 1 MSTPARRRLMRDFKRLQEDPPVGV 24
>UBE2B_MOUSE (P63147) Ubiquitin-conjugating enzyme E2 B (EC 6.3.2.19)| (Ubiquitin-protein ligase B) (Ubiquitin carrier protein B) (HR6B) (E214K) Length = 152 Score = 47.8 bits (112), Expect = 9e-06 Identities = 20/24 (83%), Positives = 23/24 (95%) Frame = +2 Query: 50 MSTPARKRLMRDFKRLQQDPPXGI 121 MSTPAR+RLMRDFKRLQ+DPP G+ Sbjct: 1 MSTPARRRLMRDFKRLQEDPPVGV 24
>UBE2B_HUMAN (P63146) Ubiquitin-conjugating enzyme E2 B (EC 6.3.2.19)| (Ubiquitin-protein ligase B) (Ubiquitin carrier protein B) (HR6B) (hHR6B) (E2-17 kDa) Length = 152 Score = 47.8 bits (112), Expect = 9e-06 Identities = 20/24 (83%), Positives = 23/24 (95%) Frame = +2 Query: 50 MSTPARKRLMRDFKRLQQDPPXGI 121 MSTPAR+RLMRDFKRLQ+DPP G+ Sbjct: 1 MSTPARRRLMRDFKRLQEDPPVGV 24
>UBC2_SCHPO (P23566) Ubiquitin-conjugating enzyme E2 2 (EC 6.3.2.19)| (Ubiquitin-protein ligase ubc2) (Ubiquitin carrier protein ubc2) (RAD6 homolog) Length = 151 Score = 45.4 bits (106), Expect = 4e-05 Identities = 19/24 (79%), Positives = 22/24 (91%) Frame = +2 Query: 50 MSTPARKRLMRDFKRLQQDPPXGI 121 MST AR+RLMRDFKR+QQDPP G+ Sbjct: 1 MSTTARRRLMRDFKRMQQDPPAGV 24
>UBC2_YARLI (Q6C093) Ubiquitin-conjugating enzyme E2 2 (EC 6.3.2.19)| (Ubiquitin-protein ligase UBC2) (Ubiquitin carrier protein UBC2) Length = 151 Score = 45.1 bits (105), Expect = 6e-05 Identities = 19/24 (79%), Positives = 22/24 (91%) Frame = +2 Query: 50 MSTPARKRLMRDFKRLQQDPPXGI 121 MST AR+RLMRDFKR+QQDPP G+ Sbjct: 1 MSTTARRRLMRDFKRMQQDPPQGV 24
>UBC1_CAEEL (P52478) Ubiquitin-conjugating enzyme E2 1 (EC 6.3.2.19)| (Ubiquitin-protein ligase 1) (Ubiquitin carrier protein 1) Length = 192 Score = 44.7 bits (104), Expect = 7e-05 Identities = 17/24 (70%), Positives = 23/24 (95%) Frame = +2 Query: 50 MSTPARKRLMRDFKRLQQDPPXGI 121 M+TP+R+RLMRDFK+LQ+DPP G+ Sbjct: 1 MTTPSRRRLMRDFKKLQEDPPAGV 24
>UBC2_DEBHA (Q6BU36) Ubiquitin-conjugating enzyme E2 2 (EC 6.3.2.19)| (Ubiquitin-protein ligase UBC2) (Ubiquitin carrier protein UBC2) Length = 168 Score = 44.3 bits (103), Expect = 1e-04 Identities = 18/24 (75%), Positives = 22/24 (91%) Frame = +2 Query: 50 MSTPARKRLMRDFKRLQQDPPXGI 121 MSTPA++RLMRDFKR+QQD P G+ Sbjct: 1 MSTPAKRRLMRDFKRMQQDAPSGV 24
>UBC3_ARATH (P42746) Ubiquitin-conjugating enzyme E2-17 kDa 3 (EC 6.3.2.19)| (Ubiquitin-protein ligase 3) (Ubiquitin carrier protein 3) Length = 150 Score = 43.5 bits (101), Expect = 2e-04 Identities = 19/24 (79%), Positives = 22/24 (91%) Frame = +2 Query: 50 MSTPARKRLMRDFKRLQQDPPXGI 121 M+TPA+KRLM DFKRLQ+DPP GI Sbjct: 1 MTTPAKKRLMWDFKRLQKDPPVGI 24
>UBC2_TRIHA (Q58FS2) Ubiquitin-conjugating enzyme E2 2 (EC 6.3.2.19)| (Ubiquitin-protein ligase UBC2) (Ubiquitin carrier protein UBC2) Length = 151 Score = 43.1 bits (100), Expect = 2e-04 Identities = 18/24 (75%), Positives = 21/24 (87%) Frame = +2 Query: 50 MSTPARKRLMRDFKRLQQDPPXGI 121 MST AR+RLMRDFKR+Q DPP G+ Sbjct: 1 MSTAARRRLMRDFKRMQTDPPAGV 24
>UBC2_NEUCR (P52493) Ubiquitin-conjugating enzyme E2 2 (EC 6.3.2.19)| (Ubiquitin-protein ligase ubc2) (Ubiquitin carrier protein ubc2) (Mutagen-sensitive protein 8) Length = 151 Score = 43.1 bits (100), Expect = 2e-04 Identities = 18/24 (75%), Positives = 21/24 (87%) Frame = +2 Query: 50 MSTPARKRLMRDFKRLQQDPPXGI 121 MST AR+RLMRDFKR+Q DPP G+ Sbjct: 1 MSTAARRRLMRDFKRMQTDPPAGV 24
>UBC2_NECHA (P78717) Ubiquitin-conjugating enzyme E2 2 (EC 6.3.2.19)| (Ubiquitin-protein ligase UBC2) (Ubiquitin carrier protein UBC2) (Radiation sensitivity protein 6) Length = 151 Score = 43.1 bits (100), Expect = 2e-04 Identities = 18/24 (75%), Positives = 21/24 (87%) Frame = +2 Query: 50 MSTPARKRLMRDFKRLQQDPPXGI 121 MST AR+RLMRDFKR+Q DPP G+ Sbjct: 1 MSTAARRRLMRDFKRMQTDPPAGV 24
>UBC2_EMENI (Q96UP5) Ubiquitin-conjugating enzyme E2 2 (EC 6.3.2.19)| (Ubiquitin-protein ligase ubc2) (Ubiquitin carrier protein ubc2) (UV sensitivity protein J) Length = 151 Score = 43.1 bits (100), Expect = 2e-04 Identities = 18/24 (75%), Positives = 21/24 (87%) Frame = +2 Query: 50 MSTPARKRLMRDFKRLQQDPPXGI 121 MST AR+RLMRDFKR+Q DPP G+ Sbjct: 1 MSTSARRRLMRDFKRMQTDPPAGV 24
>UBC2_ASPFU (Q4WLA7) Ubiquitin-conjugating enzyme E2 2 (EC 6.3.2.19)| (Ubiquitin-protein ligase ubc2) (Ubiquitin carrier protein ubc2) Length = 151 Score = 43.1 bits (100), Expect = 2e-04 Identities = 18/24 (75%), Positives = 21/24 (87%) Frame = +2 Query: 50 MSTPARKRLMRDFKRLQQDPPXGI 121 MST AR+RLMRDFKR+Q DPP G+ Sbjct: 1 MSTSARRRLMRDFKRMQTDPPAGV 24
>UBC2_USTMA (Q4PFA5) Ubiquitin-conjugating enzyme E2 2 (EC 6.3.2.19)| (Ubiquitin-protein ligase UBC2) (Ubiquitin carrier protein UBC2) Length = 185 Score = 42.4 bits (98), Expect = 4e-04 Identities = 18/24 (75%), Positives = 21/24 (87%) Frame = +2 Query: 50 MSTPARKRLMRDFKRLQQDPPXGI 121 MSTP++KRL+RDFKRL DPP GI Sbjct: 1 MSTPSKKRLIRDFKRLSTDPPGGI 24
>UBC2_KLULA (Q6CUD9) Ubiquitin-conjugating enzyme E2 2 (EC 6.3.2.19)| (Ubiquitin-protein ligase UBC2) (Ubiquitin carrier protein UBC2) Length = 164 Score = 42.0 bits (97), Expect = 5e-04 Identities = 17/24 (70%), Positives = 22/24 (91%) Frame = +2 Query: 50 MSTPARKRLMRDFKRLQQDPPXGI 121 MSTPAR+RLMRDFKR+++D P G+ Sbjct: 1 MSTPARRRLMRDFKRMKEDSPPGV 24
>UBC2_ASHGO (Q75EB8) Ubiquitin-conjugating enzyme E2 2 (EC 6.3.2.19)| (Ubiquitin-protein ligase UBC2) (Ubiquitin carrier protein UBC2) Length = 170 Score = 42.0 bits (97), Expect = 5e-04 Identities = 17/24 (70%), Positives = 22/24 (91%) Frame = +2 Query: 50 MSTPARKRLMRDFKRLQQDPPXGI 121 MSTPAR+RLMRDFKR+++D P G+ Sbjct: 1 MSTPARRRLMRDFKRMKEDAPPGV 24
>UBC2_CANGA (Q6FR76) Ubiquitin-conjugating enzyme E2 2 (EC 6.3.2.19)| (Ubiquitin-protein ligase UBC2) (Ubiquitin carrier protein UBC2) Length = 167 Score = 42.0 bits (97), Expect = 5e-04 Identities = 17/24 (70%), Positives = 22/24 (91%) Frame = +2 Query: 50 MSTPARKRLMRDFKRLQQDPPXGI 121 MSTPAR+RLMRDFKR+++D P G+ Sbjct: 1 MSTPARRRLMRDFKRMKEDSPPGV 24
>UBC2_YEAST (P06104) Ubiquitin-conjugating enzyme E2 2 (EC 6.3.2.19)| (Ubiquitin-protein ligase UBC2) (Ubiquitin carrier protein UBC2) (Radiation sensitivity protein 6) Length = 172 Score = 42.0 bits (97), Expect = 5e-04 Identities = 17/24 (70%), Positives = 22/24 (91%) Frame = +2 Query: 50 MSTPARKRLMRDFKRLQQDPPXGI 121 MSTPAR+RLMRDFKR+++D P G+ Sbjct: 1 MSTPARRRLMRDFKRMKEDAPPGV 24
>UBC2_CRYNE (Q5KN22) Ubiquitin-conjugating enzyme E2 2 (EC 6.3.2.19)| (Ubiquitin-protein ligase UBC2) (Ubiquitin carrier protein UBC2) Length = 169 Score = 36.2 bits (82), Expect = 0.026 Identities = 16/24 (66%), Positives = 19/24 (79%) Frame = +2 Query: 50 MSTPARKRLMRDFKRLQQDPPXGI 121 MST A++RL+RDFKRL D P GI Sbjct: 1 MSTAAKRRLIRDFKRLTSDAPIGI 24 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.308 0.127 0.365 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 8,772,290 Number of Sequences: 219361 Number of extensions: 66229 Number of successful extensions: 176 Number of sequences better than 10.0: 28 Number of HSP's better than 10.0 without gapping: 176 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 176 length of database: 80,573,946 effective HSP length: 16 effective length of database: 77,064,170 effective search space used: 1849540080 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.7 bits)
