No.
Definition
Score (bits)
E Value
1 ref|XM_478770.1| Oryza sativa (japonica cultivar-group), mRNA
630
e-177
2 dbj|AK100076.1| Oryza sativa (japonica cultivar-group) cDNA clon...
630
e-177
3 ref|XM_478769.1| Oryza sativa (japonica cultivar-group), mRNA
535
e-149
4 gb|AY107748.1| Zea mays PCO123054 mRNA sequence
430
e-117
5 dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D...
163
9e-37
6 dbj|AP003981.3| Oryza sativa (japonica cultivar-group) genomic D...
163
9e-37
7 ref|NM_115607.2| Arabidopsis thaliana metalloendopeptidase AT3G5...
46
0.14
8 gb|AY035059.1| Arabidopsis thaliana At3g57470 mRNA sequence
46
0.14
9 emb|BX823565.1|CNS0A4WF Arabidopsis thaliana Full-length cDNA Co...
46
0.14
10 emb|AJ308542.2|LES308542 Lycopersicon esculentum mRNA for insuli...
46
0.14
11 gb|AC136147.4| Mus musculus BAC clone RP23-18B3 from 8, complete...
46
0.14
12 gb|AC166652.6| Mus musculus chromosome 8, clone RP24-129F24, com...
44
0.57
13 gb|AC164531.9| Mus musculus chromosome 8, clone RP24-238M4, comp...
44
0.57
14 gb|AC148089.8| Mus musculus chromosome 8, clone RP24-366L10, com...
44
0.57
15 gb|AC157609.6| Mus musculus chromosome 8, clone RP23-94H5, compl...
44
0.57
16 gb|AC161410.3| Mus musculus chromosome 8, clone RP23-399J5, comp...
44
0.57
17 gb|AC007112.6| Arabidopsis thaliana chromosome 2 clone F24C20 ma...
44
0.57
18 gb|AC161343.14| Mus musculus chromosome 8, clone RP23-468H22, co...
44
0.57
19 gb|AC168205.7| Mus musculus chromosome 8, clone RP23-478P10, com...
42
2.2
20 ref|XM_950256.1| Theileria annulata strain Ankara hypothetical p...
42
2.2
21 emb|AL133248.1|ATT8H10 Arabidopsis thaliana DNA chromosome 3, BA...
42
2.2
22 gb|AC025586.4| Genomic sequence for Mus musculus, clone RP23-320...
42
2.2
23 emb|BX927071.12| Zebrafish DNA sequence from clone DKEY-286O23 i...
42
2.2
24 gb|AC090676.11| Homo sapiens 12 BAC RP11-654D6 (Roswell Park Can...
42
2.2
25 dbj|BA000022.2| Synechocystis sp. PCC 6803 DNA, complete genome
42
2.2
26 emb|AL845357.6| Zebrafish DNA sequence from clone DKEY-202M22 in...
42
2.2
27 emb|CR450838.5| Zebrafish DNA sequence from clone DKEY-283N16 in...
42
2.2
28 emb|AL845367.6| Zebrafish DNA sequence from clone DKEYP-33D4 in ...
42
2.2
29 emb|AL672221.14| Mouse DNA sequence from clone RP23-57B14 on chr...
42
2.2
30 emb|AL592422.11| Mouse DNA sequence from clone RP23-218O16 on ch...
42
2.2
31 gb|AC122313.4| Mus musculus BAC clone RP23-300N8 from chromosome...
40
8.9
32 gb|AC160527.9| Mus musculus chromosome 7, clone RP24-269P21, com...
40
8.9
33 gb|AC165339.2| Mus musculus BAC clone RP24-116I9 from chromosome...
40
8.9
34 gb|AC093919.2| Oryza sativa (japonica cultivar-group) chromosome...
40
8.9
35 gb|AC144811.3| Mus musculus BAC clone RP24-369J17 from chromosom...
40
8.9
36 gb|AC136491.4| Oryza sativa (japonica cultivar-group) chromosome...
40
8.9
37 gb|AY261366.1| African swine fever virus isolate Warthog, comple...
40
8.9
38 gb|AY261365.1| African swine fever virus isolate Warmbaths, comp...
40
8.9
39 gb|AY261364.1| African swine fever virus isolate Tengani 62, com...
40
8.9
40 gb|AY261360.1| African swine fever virus isolate Kenya 1950, com...
40
8.9
41 gb|AC158136.11| Mus musculus chromosome 7, clone RP23-58I15, com...
40
8.9
42 emb|CR974445.7| Pig DNA sequence from clone CH242-212D21 on chro...
40
8.9
43 emb|AL138749.13| Human DNA sequence from clone RP11-289F5 on chr...
40
8.9
44 gb|AC100400.10| Mus musculus chromosome 15, clone RP23-134E16, c...
40
8.9
45 emb|AL589871.13| Mouse DNA sequence from clone RP23-391I11 on ch...
40
8.9
46 gb|AC010997.12| Homo sapiens chromosome 10 clone RP11-399K21, co...
40
8.9
47 gb|AC100768.2| Homo sapiens chromosome 11, clone RP11-945A11, co...
40
8.9
48 gb|AC175665.3| Mus musculus BAC clone RP24-408G24 from chromosom...
40
8.9
49 gb|AC182392.2| Pan troglodytes BAC clone CH251-499D13 from chrom...
40
8.9
50 gb|AC068472.5|AC068472 Homo sapiens chromosome 11, clone RP11-71...
40
8.9
51 dbj|AK015835.1| Mus musculus adult male testis cDNA, RIKEN full-...
40
8.9
52 gb|AE010299.1| Methanosarcina acetivorans str. C2A, complete genome
40
8.9
53 dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D...
40
8.9
54 dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D...
40
8.9
55 gb|AC158937.4| Mus musculus chromosome 3, clone RP23-290L18, com...
40
8.9
56 gb|AC008906.5|AC008906 Homo sapiens chromosome 5 clone CTD-2260A...
40
8.9
57 gb|AC016717.8| Homo sapiens BAC clone RP11-314B1 from 2, complet...
40
8.9
58 gb|AC023672.9| Homo sapiens BAC clone RP11-499I20 from 2, comple...
40
8.9
59 gb|AY261363.1| African swine fever virus isolate Pretorisuskop/9...
40
8.9
60 gb|AY261362.1| African swine fever virus isolate Mkuzi 1979, com...
40
8.9
61 gb|AY261361.1| African swine fever virus isolate Malawi Lil-20/1...
40
8.9
62 dbj|AB019235.1| Arabidopsis thaliana genomic DNA, chromosome 5, ...
40
8.9
63 gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome...
40
8.9
64 emb|AL357752.19| Human DNA sequence from clone RP13-26D14 on chr...
40
8.9
65 gb|AC147971.2| Gallus gallus BAC clone CH261-79K6 from chromosom...
40
8.9
66 gb|U89697.1|OTU89697 Oxytricha trifallax DNA polymerase alpha ge...
40
8.9
67 gb|AC073883.34| Mus musculus strain C57BL/6J chromosome 3 clone ...
40
8.9
68 emb|AL831710.8| Mouse DNA sequence from clone RP23-29K19 on chro...
40
8.9
69 gb|M58155.1|ASVLIS57 African swine fever virus multigene familie...
40
8.9
70 gb|M23958.1|RATCARB12 Rat carboxypeptidase B gene, intron 9, mid...
40
8.9
>dbj|AP008213.1 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
sequence
Length = 29644043
Score = 163 bits (82), Expect = 9e-37
Identities = 107/114 (93%), Gaps = 1/114 (0%)
Strand = Plus / Minus
Query: 1 cacagcatcttacaaagncgaattgtgaagcttgaaaggggtttgaggtattattatcca 60
||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||
Sbjct: 22903588 cacagcatcttacaaag-cgaattgtaaagcttgaaaggggtttgaggtattattatcca 22903530
Query: 61 gcaatgtgcttaaatcagcaggatgaaaattcttcccttctgcattatattcag 114
||| | ||| ||||||| |||||||||||||||| |||||||||||||||||||
Sbjct: 22903529 gcattatgcctaaatcaccaggatgaaaattcttgccttctgcattatattcag 22903476
Score = 159 bits (80), Expect = 1e-35
Identities = 105/112 (93%), Gaps = 1/112 (0%)
Strand = Plus / Minus
Query: 3 cagcatcttacaaagncgaattgtgaagcttgaaaggggtttgaggtattattatccagc 62
||||||||||||||| |||||||| ||||||||||| |||||||||||||||||||||||
Sbjct: 22923834 cagcatcttacaaag-cgaattgtaaagcttgaaagaggtttgaggtattattatccagc 22923776
Query: 63 aatgtgcttaaatcagcaggatgaaaattcttcccttctgcattatattcag 114
| ||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22923775 tttatgcctaaatcagcaggatgaaaattcttcccttctgcattatattcag 22923724
Score = 153 bits (77), Expect = 9e-34
Identities = 113/125 (90%)
Strand = Plus / Minus
Query: 112 cagattcatcaggacgatctcaaacaaaatgtcctacttgagttgcttgctgttgttgct 171
|||||||||||||| ||||||||| ||||||| |||| ||||||||||| ||||||||
Sbjct: 22903324 cagattcatcaggatgatctcaaaaaaaatgttatactccagttgcttgctcttgttgct 22903265
Query: 172 aagcaaccggcttttcaccaattacgttcggttgagcagcttgggtacatagcactgctt 231
|||||||| |||||||||||||||||||| |||||||| ||||| |||||| ||||||||
Sbjct: 22903264 aagcaaccagcttttcaccaattacgttcagttgagcaacttggctacataacactgctt 22903205
Query: 232 agaca 236
|||||
Sbjct: 22903204 agaca 22903200
Score = 145 bits (73), Expect = 2e-31
Identities = 109/121 (90%)
Strand = Plus / Minus
Query: 112 cagattcatcaggacgatctcaaacaaaatgtcctacttgagttgcttgctgttgttgct 171
|||||||||||||| ||||||||||||||||| |||||| | ||||||||| ||||||||
Sbjct: 22886828 cagattcatcaggatgatctcaaacaaaatgttctacttcaattgcttgctcttgttgct 22886769
Query: 172 aagcaaccggcttttcaccaattacgttcggttgagcagcttgggtacatagcactgctt 231
|||||||| |||||||||||||| ||||| |||||||| ||||| |||||| || |||||
Sbjct: 22886768 aagcaaccagcttttcaccaattgcgttcagttgagcaacttggctacataacagtgctt 22886709
Query: 232 a 232
|
Sbjct: 22886708 a 22886708
Score = 125 bits (63), Expect = 2e-25
Identities = 99/111 (89%)
Strand = Plus / Minus
Query: 112 cagattcatcaggacgatctcaaacaaaatgtcctacttgagttgcttgctgttgttgct 171
|||||||||||||| || |||||||||||||| |||||| |||||||||| ||||||||
Sbjct: 22923066 cagattcatcaggatgacctcaaacaaaatgttctacttcagttgcttgcccttgttgct 22923007
Query: 172 aagcaaccggcttttcaccaattacgttcggttgagcagcttgggtacata 222
|||||||| || ||||||||||||||||| ||||| || ||||| ||||||
Sbjct: 22923006 aagcaaccagcctttcaccaattacgttcagttgaacaacttggctacata 22922956
Score = 125 bits (63), Expect = 2e-25
Identities = 105/117 (89%), Gaps = 4/117 (3%)
Strand = Plus / Minus
Query: 1 cacagcatcttacaaagncgaattgtgaagcttgaaaggggtttgaggtattattatcca 60
||||||||||||||||| |||||||| || ||||||||||||| ||||||||||||||||
Sbjct: 22887117 cacagcatcttacaaag-cgaattgtaaaacttgaaaggggttggaggtattattatcca 22887059
Query: 61 gcaatgtgcttaaatcagcaggatg---aaaattcttcccttctgcattatattcag 114
||| ||||| ||||||| ||||||| ||||||||||| | |||||||||||||||
Sbjct: 22887058 gcattgtgcctaaatcaccaggatgaaaaaaattcttccatcctgcattatattcag 22887002
Score = 103 bits (52), Expect = 7e-19
Identities = 103/120 (85%)
Strand = Plus / Minus
Query: 377 agagtaatgtcaatgctgtcattgacatgaaacgggagaaatacaagaacataagggagg 436
||||||| || || ||| ||||||||||||| ||||||||||||||| ||||| ||||
Sbjct: 22902728 agagtaacgtgaacgctctcattgacatgaagttggagaaatacaagaatataagagagg 22902669
Query: 437 aatcagcattcttttggggggagatttctcaaggaacactgaaatttgatagaaaggaag 496
||||||| ||||| ||||| |||||||| ||||||| |||||||||||| |||| ||||
Sbjct: 22902668 aatcagctttcttctggggagagatttcggaaggaactctgaaatttgatcgaaaagaag 22902609
Score = 95.6 bits (48), Expect = 2e-16
Identities = 90/104 (86%)
Strand = Plus / Minus
Query: 388 aatgctgtcattgacatgaaacgggagaaatacaagaacataagggaggaatcagcattc 447
|||||| ||||||||||||| | ||||||||||||||| ||||| ||||||||||| |||
Sbjct: 22886186 aatgctctcattgacatgaagctggagaaatacaagaatataagagaggaatcagcgttc 22886127
Query: 448 ttttggggggagatttctcaaggaacactgaaatttgatagaaa 491
|| ||| || ||||| ||||||| |||||||||||||||||
Sbjct: 22886126 ttctggaaagaaatttcggaaggaactctgaaatttgatagaaa 22886083
Score = 93.7 bits (47), Expect = 7e-16
Identities = 53/55 (96%)
Strand = Plus / Minus
Query: 238 agaaatgattcaggagtccgtgggttgcaatttataatccagtcaaccgtgaagg 292
|||||||||||||| |||||||| |||||||||||||||||||||||||||||||
Sbjct: 22903070 agaaatgattcaggtgtccgtggtttgcaatttataatccagtcaaccgtgaagg 22903016
Score = 89.7 bits (45), Expect = 1e-14
Identities = 72/81 (88%)
Strand = Plus / Minus
Query: 411 ggagaaatacaagaacataagggaggaatcagcattcttttggggggagatttctcaagg 470
||||||||||||||| ||||| ||||||||||| ||||| ||| | ||||| ||| ||||
Sbjct: 22922499 ggagaaatacaagaatataagagaggaatcagctttcttctggcgagagatctctgaagg 22922440
Query: 471 aacactgaaatttgatagaaa 491
||| |||||||||||||||||
Sbjct: 22922439 aactctgaaatttgatagaaa 22922419
Score = 85.7 bits (43), Expect = 2e-13
Identities = 115/139 (82%)
Strand = Plus / Minus
Query: 500 aggttgctgcactgggggagcttaagaaggaagagttgatagagttctttgataattatg 559
|||||||||||||| |||| |||||||| || ||||||||||||||||| | ||| |||
Sbjct: 22902532 aggttgctgcactgagggatcttaagaaagaggagttgatagagttcttcaacaatcatg 22902473
Query: 560 tcaaggtcggcgcaccagaaaagaagatccttagcatacaaatctatggtggtctccatg 619
|||| || |||||| |||||||||| || || || ||| | || || |||||||||
Sbjct: 22902472 tcaaagttaatgcaccacaaaagaagatactcagtattcaagtttacggcggtctccatt 22902413
Query: 620 cctctgagtacgaaaagat 638
|||| ||||||||||||||
Sbjct: 22902412 cctcggagtacgaaaagat 22902394
Score = 83.8 bits (42), Expect = 7e-13
Identities = 123/150 (82%)
Strand = Plus / Minus
Query: 500 aggttgctgcactgggggagcttaagaaggaagagttgatagagttctttgataattatg 559
|||||||||||||| |||| || || || || |||||||| |||||||| ||||| |||
Sbjct: 22886003 aggttgctgcactgagggatctcaataaagaggagttgattgagttcttcaataatcatg 22885944
Query: 560 tcaaggtcggcgcaccagaaaagaagatccttagcatacaaatctatggtggtctccatg 619
|||| || |||||| ||||||| || |||||||| ||| | || || |||||||||
Sbjct: 22885943 tcaaagttaatgcaccacaaaagaaaattcttagcattcaagtttacggcggtctccatt 22885884
Query: 620 cctctgagtacgaaaagattgttcatgatg 649
|||| |||||||||||||| ||||| ||||
Sbjct: 22885883 cctccgagtacgaaaagatagttcacgatg 22885854
Score = 77.8 bits (39), Expect = 4e-11
Identities = 51/55 (92%)
Strand = Plus / Minus
Query: 238 agaaatgattcaggagtccgtgggttgcaatttataatccagtcaaccgtgaagg 292
|||||||||||||| |||||||| |||||||||| |||||||||||| |||||||
Sbjct: 22922833 agaaatgattcaggcgtccgtggcttgcaatttacaatccagtcaactgtgaagg 22922779
Score = 73.8 bits (37), Expect = 6e-10
Identities = 76/89 (85%)
Strand = Plus / Minus
Query: 290 aggatccatccaatctggatgccagggttgaagctttcctcaagatgtttgaagtcacac 349
|||||||| |||| ||||||| || |||||||||||||| | ||||||||||| || |
Sbjct: 22902943 aggatccagccaacttggatgctagagttgaagctttccttacgatgtttgaaggaactc 22902884
Query: 350 tacacgaaatgcctgatgcagaattcaag 378
|| || ||||||||||| |||||||||||
Sbjct: 22902883 tataccaaatgcctgatacagaattcaag 22902855
Score = 61.9 bits (31), Expect = 2e-06
Identities = 49/55 (89%)
Strand = Plus / Minus
Query: 238 agaaatgattcaggagtccgtgggttgcaatttataatccagtcaaccgtgaagg 292
|||||||||||||| || || || |||||||| ||||| ||||||||||||||||
Sbjct: 22886557 agaaatgattcaggtgttcggggattgcaattcataattcagtcaaccgtgaagg 22886503
Score = 58.0 bits (29), Expect = 4e-05
Identities = 74/89 (83%)
Strand = Plus / Minus
Query: 290 aggatccatccaatctggatgccagggttgaagctttcctcaagatgtttgaagtcacac 349
|||||||| |||| || |||||||| || |||||||| || ||||||||||||| || |
Sbjct: 22922709 aggatccagccaacctagatgccagagtggaagcttttcttaagatgtttgaaggaactc 22922650
Query: 350 tacacgaaatgcctgatgcagaattcaag 378
|| || ||||||| ||| ||||||||||
Sbjct: 22922649 tataccaaatgcccgatatagaattcaag 22922621
Score = 58.0 bits (29), Expect = 4e-05
Identities = 74/89 (83%)
Strand = Plus / Minus
Query: 290 aggatccatccaatctggatgccagggttgaagctttcctcaagatgtttgaagtcacac 349
|||||||||| || ||||||| ||| || |||||||| || || |||||||||| || |
Sbjct: 22886431 aggatccatcaaacctggatgacagagtggaagcttttcttaatatgtttgaagggactc 22886372
Query: 350 tacacgaaatgcctgatgcagaattcaag 378
|| || |||||||||||| ||| ||||||
Sbjct: 22886371 tataccaaatgcctgatgaagagttcaag 22886343
Score = 56.0 bits (28), Expect = 1e-04
Identities = 55/64 (85%)
Strand = Plus / Minus
Query: 500 aggttgctgcactgggggagcttaagaaggaagagttgatagagttctttgataattatg 559
|||||||||||||| |||| || ||||| || ||| |||| |||||||| |||||| |||
Sbjct: 22922340 aggttgctgcactgagggatctcaagaaagaggagctgattgagttcttcgataatcatg 22922281
Query: 560 tcaa 563
||||
Sbjct: 22922280 tcaa 22922277
>dbj|AP003981.3 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
clone:OJ1019_E02
Length = 121607
Score = 163 bits (82), Expect = 9e-37
Identities = 107/114 (93%), Gaps = 1/114 (0%)
Strand = Plus / Minus
Query: 1 cacagcatcttacaaagncgaattgtgaagcttgaaaggggtttgaggtattattatcca 60
||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||
Sbjct: 96855 cacagcatcttacaaag-cgaattgtaaagcttgaaaggggtttgaggtattattatcca 96797
Query: 61 gcaatgtgcttaaatcagcaggatgaaaattcttcccttctgcattatattcag 114
||| | ||| ||||||| |||||||||||||||| |||||||||||||||||||
Sbjct: 96796 gcattatgcctaaatcaccaggatgaaaattcttgccttctgcattatattcag 96743
Score = 159 bits (80), Expect = 1e-35
Identities = 105/112 (93%), Gaps = 1/112 (0%)
Strand = Plus / Minus
Query: 3 cagcatcttacaaagncgaattgtgaagcttgaaaggggtttgaggtattattatccagc 62
||||||||||||||| |||||||| ||||||||||| |||||||||||||||||||||||
Sbjct: 117101 cagcatcttacaaag-cgaattgtaaagcttgaaagaggtttgaggtattattatccagc 117043
Query: 63 aatgtgcttaaatcagcaggatgaaaattcttcccttctgcattatattcag 114
| ||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 117042 tttatgcctaaatcagcaggatgaaaattcttcccttctgcattatattcag 116991
Score = 153 bits (77), Expect = 9e-34
Identities = 113/125 (90%)
Strand = Plus / Minus
Query: 112 cagattcatcaggacgatctcaaacaaaatgtcctacttgagttgcttgctgttgttgct 171
|||||||||||||| ||||||||| ||||||| |||| ||||||||||| ||||||||
Sbjct: 96591 cagattcatcaggatgatctcaaaaaaaatgttatactccagttgcttgctcttgttgct 96532
Query: 172 aagcaaccggcttttcaccaattacgttcggttgagcagcttgggtacatagcactgctt 231
|||||||| |||||||||||||||||||| |||||||| ||||| |||||| ||||||||
Sbjct: 96531 aagcaaccagcttttcaccaattacgttcagttgagcaacttggctacataacactgctt 96472
Query: 232 agaca 236
|||||
Sbjct: 96471 agaca 96467
Score = 145 bits (73), Expect = 2e-31
Identities = 109/121 (90%)
Strand = Plus / Minus
Query: 112 cagattcatcaggacgatctcaaacaaaatgtcctacttgagttgcttgctgttgttgct 171
|||||||||||||| ||||||||||||||||| |||||| | ||||||||| ||||||||
Sbjct: 80095 cagattcatcaggatgatctcaaacaaaatgttctacttcaattgcttgctcttgttgct 80036
Query: 172 aagcaaccggcttttcaccaattacgttcggttgagcagcttgggtacatagcactgctt 231
|||||||| |||||||||||||| ||||| |||||||| ||||| |||||| || |||||
Sbjct: 80035 aagcaaccagcttttcaccaattgcgttcagttgagcaacttggctacataacagtgctt 79976
Query: 232 a 232
|
Sbjct: 79975 a 79975
Score = 125 bits (63), Expect = 2e-25
Identities = 99/111 (89%)
Strand = Plus / Minus
Query: 112 cagattcatcaggacgatctcaaacaaaatgtcctacttgagttgcttgctgttgttgct 171
|||||||||||||| || |||||||||||||| |||||| |||||||||| ||||||||
Sbjct: 116333 cagattcatcaggatgacctcaaacaaaatgttctacttcagttgcttgcccttgttgct 116274
Query: 172 aagcaaccggcttttcaccaattacgttcggttgagcagcttgggtacata 222
|||||||| || ||||||||||||||||| ||||| || ||||| ||||||
Sbjct: 116273 aagcaaccagcctttcaccaattacgttcagttgaacaacttggctacata 116223
Score = 125 bits (63), Expect = 2e-25
Identities = 105/117 (89%), Gaps = 4/117 (3%)
Strand = Plus / Minus
Query: 1 cacagcatcttacaaagncgaattgtgaagcttgaaaggggtttgaggtattattatcca 60
||||||||||||||||| |||||||| || ||||||||||||| ||||||||||||||||
Sbjct: 80384 cacagcatcttacaaag-cgaattgtaaaacttgaaaggggttggaggtattattatcca 80326
Query: 61 gcaatgtgcttaaatcagcaggatg---aaaattcttcccttctgcattatattcag 114
||| ||||| ||||||| ||||||| ||||||||||| | |||||||||||||||
Sbjct: 80325 gcattgtgcctaaatcaccaggatgaaaaaaattcttccatcctgcattatattcag 80269
Score = 103 bits (52), Expect = 7e-19
Identities = 103/120 (85%)
Strand = Plus / Minus
Query: 377 agagtaatgtcaatgctgtcattgacatgaaacgggagaaatacaagaacataagggagg 436
||||||| || || ||| ||||||||||||| ||||||||||||||| ||||| ||||
Sbjct: 95995 agagtaacgtgaacgctctcattgacatgaagttggagaaatacaagaatataagagagg 95936
Query: 437 aatcagcattcttttggggggagatttctcaaggaacactgaaatttgatagaaaggaag 496
||||||| ||||| ||||| |||||||| ||||||| |||||||||||| |||| ||||
Sbjct: 95935 aatcagctttcttctggggagagatttcggaaggaactctgaaatttgatcgaaaagaag 95876
Score = 95.6 bits (48), Expect = 2e-16
Identities = 90/104 (86%)
Strand = Plus / Minus
Query: 388 aatgctgtcattgacatgaaacgggagaaatacaagaacataagggaggaatcagcattc 447
|||||| ||||||||||||| | ||||||||||||||| ||||| ||||||||||| |||
Sbjct: 79453 aatgctctcattgacatgaagctggagaaatacaagaatataagagaggaatcagcgttc 79394
Query: 448 ttttggggggagatttctcaaggaacactgaaatttgatagaaa 491
|| ||| || ||||| ||||||| |||||||||||||||||
Sbjct: 79393 ttctggaaagaaatttcggaaggaactctgaaatttgatagaaa 79350
Score = 93.7 bits (47), Expect = 7e-16
Identities = 53/55 (96%)
Strand = Plus / Minus
Query: 238 agaaatgattcaggagtccgtgggttgcaatttataatccagtcaaccgtgaagg 292
|||||||||||||| |||||||| |||||||||||||||||||||||||||||||
Sbjct: 96337 agaaatgattcaggtgtccgtggtttgcaatttataatccagtcaaccgtgaagg 96283
Score = 89.7 bits (45), Expect = 1e-14
Identities = 72/81 (88%)
Strand = Plus / Minus
Query: 411 ggagaaatacaagaacataagggaggaatcagcattcttttggggggagatttctcaagg 470
||||||||||||||| ||||| ||||||||||| ||||| ||| | ||||| ||| ||||
Sbjct: 115766 ggagaaatacaagaatataagagaggaatcagctttcttctggcgagagatctctgaagg 115707
Query: 471 aacactgaaatttgatagaaa 491
||| |||||||||||||||||
Sbjct: 115706 aactctgaaatttgatagaaa 115686
Score = 85.7 bits (43), Expect = 2e-13
Identities = 115/139 (82%)
Strand = Plus / Minus
Query: 500 aggttgctgcactgggggagcttaagaaggaagagttgatagagttctttgataattatg 559
|||||||||||||| |||| |||||||| || ||||||||||||||||| | ||| |||
Sbjct: 95799 aggttgctgcactgagggatcttaagaaagaggagttgatagagttcttcaacaatcatg 95740
Query: 560 tcaaggtcggcgcaccagaaaagaagatccttagcatacaaatctatggtggtctccatg 619
|||| || |||||| |||||||||| || || || ||| | || || |||||||||
Sbjct: 95739 tcaaagttaatgcaccacaaaagaagatactcagtattcaagtttacggcggtctccatt 95680
Query: 620 cctctgagtacgaaaagat 638
|||| ||||||||||||||
Sbjct: 95679 cctcggagtacgaaaagat 95661
Score = 83.8 bits (42), Expect = 7e-13
Identities = 123/150 (82%)
Strand = Plus / Minus
Query: 500 aggttgctgcactgggggagcttaagaaggaagagttgatagagttctttgataattatg 559
|||||||||||||| |||| || || || || |||||||| |||||||| ||||| |||
Sbjct: 79270 aggttgctgcactgagggatctcaataaagaggagttgattgagttcttcaataatcatg 79211
Query: 560 tcaaggtcggcgcaccagaaaagaagatccttagcatacaaatctatggtggtctccatg 619
|||| || |||||| ||||||| || |||||||| ||| | || || |||||||||
Sbjct: 79210 tcaaagttaatgcaccacaaaagaaaattcttagcattcaagtttacggcggtctccatt 79151
Query: 620 cctctgagtacgaaaagattgttcatgatg 649
|||| |||||||||||||| ||||| ||||
Sbjct: 79150 cctccgagtacgaaaagatagttcacgatg 79121
Score = 77.8 bits (39), Expect = 4e-11
Identities = 51/55 (92%)
Strand = Plus / Minus
Query: 238 agaaatgattcaggagtccgtgggttgcaatttataatccagtcaaccgtgaagg 292
|||||||||||||| |||||||| |||||||||| |||||||||||| |||||||
Sbjct: 116100 agaaatgattcaggcgtccgtggcttgcaatttacaatccagtcaactgtgaagg 116046
Score = 73.8 bits (37), Expect = 6e-10
Identities = 76/89 (85%)
Strand = Plus / Minus
Query: 290 aggatccatccaatctggatgccagggttgaagctttcctcaagatgtttgaagtcacac 349
|||||||| |||| ||||||| || |||||||||||||| | ||||||||||| || |
Sbjct: 96210 aggatccagccaacttggatgctagagttgaagctttccttacgatgtttgaaggaactc 96151
Query: 350 tacacgaaatgcctgatgcagaattcaag 378
|| || ||||||||||| |||||||||||
Sbjct: 96150 tataccaaatgcctgatacagaattcaag 96122
Score = 61.9 bits (31), Expect = 2e-06
Identities = 49/55 (89%)
Strand = Plus / Minus
Query: 238 agaaatgattcaggagtccgtgggttgcaatttataatccagtcaaccgtgaagg 292
|||||||||||||| || || || |||||||| ||||| ||||||||||||||||
Sbjct: 79824 agaaatgattcaggtgttcggggattgcaattcataattcagtcaaccgtgaagg 79770
Score = 58.0 bits (29), Expect = 4e-05
Identities = 74/89 (83%)
Strand = Plus / Minus
Query: 290 aggatccatccaatctggatgccagggttgaagctttcctcaagatgtttgaagtcacac 349
|||||||| |||| || |||||||| || |||||||| || ||||||||||||| || |
Sbjct: 115976 aggatccagccaacctagatgccagagtggaagcttttcttaagatgtttgaaggaactc 115917
Query: 350 tacacgaaatgcctgatgcagaattcaag 378
|| || ||||||| ||| ||||||||||
Sbjct: 115916 tataccaaatgcccgatatagaattcaag 115888
Score = 58.0 bits (29), Expect = 4e-05
Identities = 74/89 (83%)
Strand = Plus / Minus
Query: 290 aggatccatccaatctggatgccagggttgaagctttcctcaagatgtttgaagtcacac 349
|||||||||| || ||||||| ||| || |||||||| || || |||||||||| || |
Sbjct: 79698 aggatccatcaaacctggatgacagagtggaagcttttcttaatatgtttgaagggactc 79639
Query: 350 tacacgaaatgcctgatgcagaattcaag 378
|| || |||||||||||| ||| ||||||
Sbjct: 79638 tataccaaatgcctgatgaagagttcaag 79610
Score = 56.0 bits (28), Expect = 1e-04
Identities = 55/64 (85%)
Strand = Plus / Minus
Query: 500 aggttgctgcactgggggagcttaagaaggaagagttgatagagttctttgataattatg 559
|||||||||||||| |||| || ||||| || ||| |||| |||||||| |||||| |||
Sbjct: 115607 aggttgctgcactgagggatctcaagaaagaggagctgattgagttcttcgataatcatg 115548
Query: 560 tcaa 563
||||
Sbjct: 115547 tcaa 115544
>emb|AL357752.19 | Human DNA sequence from clone RP13-26D14 on chromosome Xq13.2-21.1
Contains the 5' end of the KIF4A gene for kinesin family
member 4A, gene FLJ21093, a novel gene, the ARR3 gene for
arrestin 3, retinal (x-arrestin), the P2RY4 gene for
pyrimidinergic receptor P2Y, G-protein coupled, 4, the
gene for a novel protein similar to diacylglycerol
O-acyltransferase 2 like 1 (DGAT2L1), a novel pseudogene,
the 3' end of the gene for a novel protein similar to
diacylglycerol O-acyltransferase homolog 2 (mouse) (DGAT2)
and two CpG islands, complete sequence
Length = 178868
Score = 40.1 bits (20), Expect = 8.9
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 464 ctcaaggaacactgaaattt 483
||||||||||||||||||||
Sbjct: 87601 ctcaaggaacactgaaattt 87582
>gb|M23958.1 |RATCARB12 Rat carboxypeptidase B gene, intron 9, middle region D
Length = 1515
Score = 40.1 bits (20), Expect = 8.9
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 388 aatgctgtcattgacatgaa 407
||||||||||||||||||||
Sbjct: 351 aatgctgtcattgacatgaa 332
Database: nt
Posted date: May 29, 2006 11:10 AM
Number of letters in database: 3,984,495,279
Number of sequences in database: 917,343
Database: /shigen/export/home/twatanab/db/nt/nt.01
Posted date: May 29, 2006 11:16 AM
Number of letters in database: 3,988,174,986
Number of sequences in database: 835,257
Database: /shigen/export/home/twatanab/db/nt/nt.02
Posted date: May 29, 2006 11:21 AM
Number of letters in database: 3,991,246,324
Number of sequences in database: 771,481
Database: /shigen/export/home/twatanab/db/nt/nt.03
Posted date: May 29, 2006 11:27 AM
Number of letters in database: 3,990,718,311
Number of sequences in database: 977,174
Database: /shigen/export/home/twatanab/db/nt/nt.04
Posted date: May 29, 2006 11:29 AM
Number of letters in database: 1,278,410,368
Number of sequences in database: 400,813
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,975,653
Number of Sequences: 3902068
Number of extensions: 6975653
Number of successful extensions: 145154
Number of sequences better than 10.0: 70
Number of HSP's better than 10.0 without gapping: 69
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 144720
Number of HSP's gapped (non-prelim): 418
length of query: 651
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 628
effective length of database: 17,143,297,704
effective search space: 10765990958112
effective search space used: 10765990958112
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)