| Clone Name | bags18e04 |
|---|---|
| Clone Library Name | barley_pub |
>YD52_SCHPO (Q10307) Hypothetical protein C6C3.02c in chromosome I| Length = 172 Score = 37.0 bits (84), Expect = 0.034 Identities = 25/106 (23%), Positives = 41/106 (38%), Gaps = 23/106 (21%) Frame = +3 Query: 9 IAQGMAFGTGSAMAHRAVDAVMG----------------PRTIQHETVVSEAAASMTP-- 134 ++ G GSA+ H + G P++ +V A S P Sbjct: 62 VSTAAGVGIGSAIGHTVGSVITGGFSGSGSNNAPADTSVPQSSYSNSVPEAAYGSAPPST 121 Query: 135 -----MDNAADDKCGNPSKAFQDCINHYGSDISKCQFYLDMLNECR 257 + A + C +K F DCIN + + S+C +YL+ L C+ Sbjct: 122 FASSAISEEAKNACKGDAKMFADCINEH--EFSQCSYYLEQLKACQ 165
>YHR6_YEAST (P38824) Hypothetical 17.3 kDa protein in ERP5-ORC6 intergenic| region Length = 151 Score = 32.7 bits (73), Expect = 0.64 Identities = 15/41 (36%), Positives = 19/41 (46%) Frame = +3 Query: 138 DNAADDKCGNPSKAFQDCINHYGSDISKCQFYLDMLNECRR 260 D+ D C SK C+ D SKCQ Y D EC++ Sbjct: 97 DSQYYDPCEESSKLSFQCLERNDYDRSKCQEYFDAYRECKK 137
>DCUP_PROMM (Q7V8B4) Uroporphyrinogen decarboxylase (EC 4.1.1.37) (URO-D) (UPD)| Length = 352 Score = 30.4 bits (67), Expect = 3.2 Identities = 17/43 (39%), Positives = 21/43 (48%) Frame = +3 Query: 18 GMAFGTGSAMAHRAVDAVMGPRTIQHETVVSEAAASMTPMDNA 146 G+ FGT A+ R VDAV R +H + TP DNA Sbjct: 292 GLLFGTPEAIRERIVDAVRKARGRRHILNLGHGILPGTPEDNA 334
>YQ5B_CAEEL (Q09254) Hypothetical protein C16C10.11| Length = 154 Score = 29.6 bits (65), Expect = 5.4 Identities = 20/75 (26%), Positives = 31/75 (41%), Gaps = 1/75 (1%) Frame = +3 Query: 36 GSAMAHRAVDAVMGPRTIQHETVVSEAAASM-TPMDNAADDKCGNPSKAFQDCINHYGSD 212 GSA+ H G + E + AAA P + C + F DC + SD Sbjct: 77 GSAVGHAVGGMFTGGGSSHAEQAPAAAAAPAGAPQASGYSQPCEFEWRQFVDCAQNQ-SD 135 Query: 213 ISKCQFYLDMLNECR 257 +S C + D+ +C+ Sbjct: 136 VSLCNGFNDIFKQCK 150
>GIPR_RAT (P43219) Gastric inhibitory polypeptide receptor precursor (GIP-R)| (Glucose-dependent insulinotropic polypeptide receptor) Length = 455 Score = 29.6 bits (65), Expect = 5.4 Identities = 10/16 (62%), Positives = 11/16 (68%) Frame = +1 Query: 439 GLCCPGSISLY*CWNY 486 GL C GS +Y CWNY Sbjct: 55 GLACNGSFDMYACWNY 70
>VCLA_GOSHI (P09799) Vicilin GC72-A precursor (Alpha-globulin A)| Length = 605 Score = 28.9 bits (63), Expect = 9.2 Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 6/53 (11%) Frame = -1 Query: 150 QQHCPLES*MQRPQTQQSHAEWYGDPSQRQQP------CAP*HCQYRKPCPEQ 10 +QHC E RP +QS E Y + Q+QQP C CQ+++ PE+ Sbjct: 88 RQHCQQEERRLRPHCEQSCREQY-EKQQQQQPDKQFKECQQ-RCQWQEQRPER 138
>LEUNG_ARATH (Q9FUY2) Transcriptional corepressor LEUNIG| Length = 931 Score = 28.9 bits (63), Expect = 9.2 Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 1/52 (1%) Frame = -1 Query: 162 HTYHQQHCPLES*MQRPQTQQSHAEWYGDPS-QRQQPCAP*HCQYRKPCPEQ 10 H +HQQ + Q+ Q QQ PS Q+QQ P H Q +P P+Q Sbjct: 132 HHHHQQQQQQQQQQQQQQQQQQQQHQNQPPSQQQQQQSTPQHQQ--QPTPQQ 181 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 68,938,071 Number of Sequences: 219361 Number of extensions: 1245648 Number of successful extensions: 3343 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 3262 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3341 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4085413911 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)