ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags17o20 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_197648.1| Oryza sativa (japonica cultivar-group) putative aminotransferase (OSJNBa0082M15.2), mRNA Length = 1449 Score = 541 bits (273), Expect = e-150 Identities = 490/561 (87%), Gaps = 1/561 (0%) Strand = Plus / Plus Query: 2 cctgagtacacattcattatttttgcctcccctgttgggaactactttaaggaaggatta 61 |||||||| || |||||||| |||| ||||||||| |||||||||||||||||||| ||| Sbjct: 550 cctgagtatacgttcattatatttgtctcccctgtggggaactactttaaggaaggttta 609 Query: 62 gccccaataaatttgatagttgaagacaagtttcatcgggccacccctggtggaactgga 121 || ||||||||||||||||||||||| ||||||||||| || |||||||||||||||||| Sbjct: 610 gctccaataaatttgatagttgaagataagtttcatcgtgcaacccctggtggaactgga 669 Query: 122 ggtgttaagaccattgggaattatgcctcggtcttgatggcacagaagattgcaaaggag 181 |||| |||||||| || |||||||||||||||||||||||||| ||||||||||| || Sbjct: 670 agtgtgaagaccataggaaattatgcctcggtcttgatggcacaaaagattgcaaaagaa 729 Query: 182 aaaggttattctgatgttctctacttggatgctgttgagaaaaagtaccttgaagaagta 241 || || |||||||||||||||||||||||||||||| | |||||||| ||||||||||| Sbjct: 730 aagggctattctgatgttctctacttggatgctgttcacaaaaagtatcttgaagaagtt 789 Query: 242 tcttcgtgtaatatttttgttgtgaagggcaatgttatttcaactccagcaataaaagga 301 ||||| ||||||||||||||||| ||||||||||| ||||||||||||||| |||||||| Sbjct: 790 tcttcatgtaatatttttgttgtcaagggcaatgtcatttcaactccagcagtaaaagga 849 Query: 302 acaatactaccgggcatcacaaggaaaagtataattgatgttgctctgagtaaaggcttc 361 |||||| | || |||||||||||||||||||| ||||||||||||||||| || || ||| Sbjct: 850 acaatattgccaggcatcacaaggaaaagtatcattgatgttgctctgagcaagggtttc 909 Query: 362 caggttgaggagcggctcgtgtccgtggatgagttgcttgatgctgatgaagtgttctgc 421 ||||| |||||||| || ||||| || || ||| ||||||| |||||||| || |||||| Sbjct: 910 caggtcgaggagcgacttgtgtcagtagacgagctgcttgaagctgatgaggttttctgc 969 Query: 422 acagggacccgccgttgtagtatctcctgtaggtagtatcacatatcaagggaaaaggat 481 ||| ||| | || || ||||| |||||||| |||||||| || ||||||||||||||| | Sbjct: 970 aca-ggaactgctgtcgtagtgtctcctgtgggtagtattacctatcaagggaaaagggt 1028 Query: 482 agagtattctggcaagcaaggagtcggcgctgtgtctcagcaattgtacacctcgctgac 541 || ||| ||||||| ||||||| || | ||||||||||| | || || || |||| Sbjct: 1029 cgaatatgctggcaacaaaggagttggtgtcgtgtctcagcagctatatacttcattgac 1088 Query: 542 aagcctccagatgggccaggc 562 |||||| |||||||||||||| Sbjct: 1089 aagcctgcagatgggccaggc 1109
>dbj|AK072756.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023138J17, full insert sequence Length = 2016 Score = 533 bits (269), Expect = e-148 Identities = 489/561 (87%), Gaps = 1/561 (0%) Strand = Plus / Plus Query: 2 cctgagtacacattcattatttttgcctcccctgttgggaactactttaaggaaggatta 61 |||||||| || |||||||| |||| ||| ||||| |||||||||||||||||||| ||| Sbjct: 1166 cctgagtatacgttcattatatttgtctcgcctgtggggaactactttaaggaaggttta 1225 Query: 62 gccccaataaatttgatagttgaagacaagtttcatcgggccacccctggtggaactgga 121 || ||||||||||||||||||||||| ||||||||||| || |||||||||||||||||| Sbjct: 1226 gctccaataaatttgatagttgaagataagtttcatcgtgcaacccctggtggaactgga 1285 Query: 122 ggtgttaagaccattgggaattatgcctcggtcttgatggcacagaagattgcaaaggag 181 |||| |||||||| || |||||||||||||||||||||||||||||||||||||| || Sbjct: 1286 agtgtgaagaccataggaaattatgcctcggtcttgatggcacagaagattgcaaaagaa 1345 Query: 182 aaaggttattctgatgttctctacttggatgctgttgagaaaaagtaccttgaagaagta 241 || || |||||||||||||||||||||||||||||| | |||||||| ||||||||||| Sbjct: 1346 aagggctattctgatgttctctacttggatgctgttcacaaaaagtatcttgaagaagtt 1405 Query: 242 tcttcgtgtaatatttttgttgtgaagggcaatgttatttcaactccagcaataaaagga 301 ||||| ||||||||||||||||| ||||||||||| ||||||||||||||| |||||||| Sbjct: 1406 tcttcatgtaatatttttgttgtcaagggcaatgtcatttcaactccagcagtaaaagga 1465 Query: 302 acaatactaccgggcatcacaaggaaaagtataattgatgttgctctgagtaaaggcttc 361 |||||| | || |||||||||||||||||||| ||||||||||||||||| || || ||| Sbjct: 1466 acaatattgccaggcatcacaaggaaaagtatcattgatgttgctctgagcaagggtttc 1525 Query: 362 caggttgaggagcggctcgtgtccgtggatgagttgcttgatgctgatgaagtgttctgc 421 ||||| |||||||| || ||||| || |||||| ||||||| |||| ||| || |||||| Sbjct: 1526 caggtcgaggagcgacttgtgtcagtagatgagctgcttgaagctgctgaggttttctgc 1585 Query: 422 acagggacccgccgttgtagtatctcctgtaggtagtatcacatatcaagggaaaaggat 481 ||| ||| | || || ||||| |||||||| |||||||| || ||||||||||||||| | Sbjct: 1586 aca-ggaactgctgtcgtagtgtctcctgtgggtagtattacctatcaagggaaaagggt 1644 Query: 482 agagtattctggcaagcaaggagtcggcgctgtgtctcagcaattgtacacctcgctgac 541 || ||| ||||||| ||||||| || | ||||||||||| | || || || | || Sbjct: 1645 cgaatatgctggcaacaaaggagttggtgtcgtgtctcagcagctatatacttcattaac 1704 Query: 542 aagcctccagatgggccaggc 562 |||||| |||||||||||||| Sbjct: 1705 aagcctgcagatgggccaggc 1725
>gb|AY106370.1| Zea mays PCO098993 mRNA sequence Length = 1720 Score = 494 bits (249), Expect = e-136 Identities = 421/477 (88%), Gaps = 1/477 (0%) Strand = Plus / Plus Query: 2 cctgagtacacattcattatttttgcctcccctgttgggaactactttaaggaaggatta 61 |||||||| ||||||||||| |||| ||| |||||||| ||||||||||||||||| ||| Sbjct: 822 cctgagtatacattcattatatttgtctctcctgttggaaactactttaaggaaggttta 881 Query: 62 gccccaataaatttgatagttgaagacaagtttcatcgggccacccctggtggaactgga 121 || ||||||||||||||||||||||||||||| ||||| || || |||||||| ||||| Sbjct: 882 gcaccaataaatttgatagttgaagacaagttccatcgtgctactcctggtggtactggg 941 Query: 122 ggtgttaagaccattgggaattatgcctcggtcttgatggcacagaagattgcaaaggag 181 ||||| |||||||| || |||||||| ||||| |||||||||||||| ||||||||||| Sbjct: 942 ggtgtgaagaccataggaaattatgcttcggtgttgatggcacagaaaattgcaaaggaa 1001 Query: 182 aaaggttattctgatgttctctacttggatgctgttgagaaaaagtaccttgaagaagta 241 || |||||||||||||| ||||||||||| |||||| | || ||||||||||||||||| Sbjct: 1002 aagggttattctgatgtcctctacttggacgctgttcacaagaagtaccttgaagaagtt 1061 Query: 242 tcttcgtgtaatatttttgttgtgaagggcaatgttatttcaactccagcaataaaagga 301 ||||| || ||| |||||||||| |||| |||||||||||| || ||||||||||||||| Sbjct: 1062 tcttcatgcaatgtttttgttgtcaaggacaatgttatttctaccccagcaataaaagga 1121 Query: 302 acaatactaccgggcatcacaaggaaaagtataattgatgttgctctgagtaaaggcttc 361 |||||| |||| || ||||||||||||||||||||||| |||||| |||||||||||||| Sbjct: 1122 acaatattacctggtatcacaaggaaaagtataattgacgttgctttgagtaaaggcttc 1181 Query: 362 caggttgaggagcggctcgtgtccgtggatgagttgcttgatgctgatgaagtgttctgc 421 ||||||||||||||||| || || |||||||| |||||||||||||||| || |||||| Sbjct: 1182 caggttgaggagcggcttgtttcagtggatgaactgcttgatgctgatgaggtattctgc 1241 Query: 422 acagggacccgccgttgtagtatctcctgtaggtagtatcacatatcaagggaaaag 478 ||| ||| | || ||||| || |||||||| || || || ||||||||||||||||| Sbjct: 1242 aca-ggaactgctgttgtggtgtctcctgttgggagcattacatatcaagggaaaag 1297
>ref|NM_187638.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1218 Score = 274 bits (138), Expect = 3e-70 Identities = 351/422 (83%) Strand = Plus / Plus Query: 2 cctgagtacacattcattatttttgcctcccctgttgggaactactttaaggaaggatta 61 |||||||| || || || ||||||| |||||||||||||||||| || |||||||| ||| Sbjct: 622 cctgagtatacctttatgatttttgtctcccctgttgggaactatttcaaggaaggttta 681 Query: 62 gccccaataaatttgatagttgaagacaagtttcatcgggccacccctggtggaactgga 121 ||||| || || ||||| | ||||| || ||||| || || |||||||||||||||| Sbjct: 682 gcccctattaacttgattatagaagaaaactttcaccgtgctgcccctggtggaactggc 741 Query: 122 ggtgttaagaccattgggaattatgcctcggtcttgatggcacagaagattgcaaaggag 181 || || || |||||||| || ||||||||||| || | ||||||| ||||||||| || Sbjct: 742 ggagtgaaaaccattggaaactatgcctcggtattaaaagcacagaggattgcaaaacag 801 Query: 182 aaaggttattctgatgttctctacttggatgctgttgagaaaaagtaccttgaagaagta 241 ||||| ||||| ||||| ||||| | ||||| ||| | || || || || |||||||| Sbjct: 802 aaaggatattcagatgtcctctatctagatgccgttcacaagaaatatctggaagaagtg 861 Query: 242 tcttcgtgtaatatttttgttgtgaagggcaatgttatttcaactccagcaataaaagga 301 |||||||| ||||| ||| ||||||| |||||||||||||| |||||||||||||||||| Sbjct: 862 tcttcgtgcaatatctttattgtgaaaggcaatgttatttctactccagcaataaaagga 921 Query: 302 acaatactaccgggcatcacaaggaaaagtataattgatgttgctctgagtaaaggcttc 361 || ||||| || || || |||||||||||||| |||| ||||||| ||| ||||||||| Sbjct: 922 accatactgcctggtataacaaggaaaagtattcttgaagttgctcagagaaaaggcttc 981 Query: 362 caggttgaggagcggctcgtgtccgtggatgagttgcttgatgctgatgaagtgttctgc 421 |||||||||||| || ||||| ||||||||| | ||||| ||||||||||| |||||| Sbjct: 982 atggttgaggagcgccttgtgtcagtggatgagcttcttgaagctgatgaagttttctgc 1041 Query: 422 ac 423 || Sbjct: 1042 ac 1043
>dbj|AK108687.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-149-C06, full insert sequence Length = 1472 Score = 274 bits (138), Expect = 3e-70 Identities = 351/422 (83%) Strand = Plus / Plus Query: 2 cctgagtacacattcattatttttgcctcccctgttgggaactactttaaggaaggatta 61 |||||||| || || || ||||||| |||||||||||||||||| || |||||||| ||| Sbjct: 681 cctgagtatacctttatgatttttgtctcccctgttgggaactatttcaaggaaggttta 740 Query: 62 gccccaataaatttgatagttgaagacaagtttcatcgggccacccctggtggaactgga 121 ||||| || || ||||| | ||||| || ||||| || || |||||||||||||||| Sbjct: 741 gcccctattaacttgattatagaagaaaactttcaccgtgctgcccctggtggaactggc 800 Query: 122 ggtgttaagaccattgggaattatgcctcggtcttgatggcacagaagattgcaaaggag 181 || || || |||||||| || ||||||||||| || | ||||||| ||||||||| || Sbjct: 801 ggagtgaaaaccattggaaactatgcctcggtattaaaagcacagaggattgcaaaacag 860 Query: 182 aaaggttattctgatgttctctacttggatgctgttgagaaaaagtaccttgaagaagta 241 ||||| ||||| ||||| ||||| | ||||| ||| | || || || || |||||||| Sbjct: 861 aaaggatattcagatgtcctctatctagatgccgttcacaagaaatatctggaagaagtg 920 Query: 242 tcttcgtgtaatatttttgttgtgaagggcaatgttatttcaactccagcaataaaagga 301 |||||||| ||||| ||| ||||||| |||||||||||||| |||||||||||||||||| Sbjct: 921 tcttcgtgcaatatctttattgtgaaaggcaatgttatttctactccagcaataaaagga 980 Query: 302 acaatactaccgggcatcacaaggaaaagtataattgatgttgctctgagtaaaggcttc 361 || ||||| || || || |||||||||||||| |||| ||||||| ||| ||||||||| Sbjct: 981 accatactgcctggtataacaaggaaaagtattcttgaagttgctcagagaaaaggcttc 1040 Query: 362 caggttgaggagcggctcgtgtccgtggatgagttgcttgatgctgatgaagtgttctgc 421 |||||||||||| || ||||| ||||||||| | ||||| ||||||||||| |||||| Sbjct: 1041 atggttgaggagcgccttgtgtcagtggatgagcttcttgaagctgatgaagttttctgc 1100 Query: 422 ac 423 || Sbjct: 1101 ac 1102
>dbj|AK071103.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023077F14, full insert sequence Length = 883 Score = 212 bits (107), Expect = 1e-51 Identities = 249/295 (84%), Gaps = 1/295 (0%) Strand = Plus / Plus Query: 268 gggcaatgttatttcaactccagcaataaaaggaacaatactaccgggcatcacaaggaa 327 ||||||||| ||||||||||||||| |||||||||||||| | || |||||||||||||| Sbjct: 311 gggcaatgtcatttcaactccagcagtaaaaggaacaatattgccaggcatcacaaggaa 370 Query: 328 aagtataattgatgttgctctgagtaaaggcttccaggttgaggagcggctcgtgtccgt 387 |||||| ||||||||||||||||| || || |||||||| |||||||| || ||||| || Sbjct: 371 aagtatcattgatgttgctctgagcaagggtttccaggtcgaggagcgacttgtgtcagt 430 Query: 388 ggatgagttgcttgatgctgatgaagtgttctgcacagggacccgccgttgtagtatctc 447 |||||| ||||||| |||||||| || ||||||||| ||| | || || ||||| |||| Sbjct: 431 agatgagctgcttgaagctgatgaggttttctgcaca-ggaactgctgtcgtagtgtctc 489 Query: 448 ctgtaggtagtatcacatatcaagggaaaaggatagagtattctggcaagcaaggagtcg 507 |||| |||||||| || ||||||||||||||| | || ||| ||||||| ||||||| | Sbjct: 490 ctgtgggtagtattacctatcaagggaaaagggtcgaatatgctggcaacaaaggagttg 549 Query: 508 gcgctgtgtctcagcaattgtacacctcgctgacaagcctccagatgggccaggc 562 | | ||||||||||| | || || || | |||||||| |||||||||||||| Sbjct: 550 gtgtcgtgtctcagcagctatatacttcattaacaagcctgcagatgggccaggc 604
>gb|AC144735.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0001A14, complete sequence Length = 129292 Score = 157 bits (79), Expect = 6e-35 Identities = 109/119 (91%) Strand = Plus / Plus Query: 151 ggtcttgatggcacagaagattgcaaaggagaaaggttattctgatgttctctacttgga 210 ||||||||||||||||||||||||||| || || || ||||||||||||||||||||||| Sbjct: 29253 ggtcttgatggcacagaagattgcaaaagaaaagggctattctgatgttctctacttgga 29312 Query: 211 tgctgttgagaaaaagtaccttgaagaagtatcttcgtgtaatatttttgttgtgaagg 269 ||||||| | |||||||| ||||||||||| ||||| ||||||||||||||||| |||| Sbjct: 29313 tgctgttcacaaaaagtatcttgaagaagtttcttcatgtaatatttttgttgtcaagg 29371 Score = 133 bits (67), Expect = 8e-28 Identities = 94/103 (91%) Strand = Plus / Plus Query: 51 aggaaggattagccccaataaatttgatagttgaagacaagtttcatcgggccacccctg 110 ||||||| ||||| ||||||||||||||||||||||| ||||||||||| || ||||||| Sbjct: 28740 aggaaggtttagctccaataaatttgatagttgaagataagtttcatcgtgcaacccctg 28799 Query: 111 gtggaactggaggtgttaagaccattgggaattatgcctcggt 153 ||||||||||| |||| |||||||| || |||||||||||||| Sbjct: 28800 gtggaactggaagtgtgaagaccataggaaattatgcctcggt 28842 Score = 127 bits (64), Expect = 5e-26 Identities = 91/100 (91%) Strand = Plus / Plus Query: 267 agggcaatgttatttcaactccagcaataaaaggaacaatactaccgggcatcacaagga 326 |||||||||| ||||||||||||||| |||||||||||||| | || ||||||||||||| Sbjct: 30202 agggcaatgtcatttcaactccagcagtaaaaggaacaatattgccaggcatcacaagga 30261 Query: 327 aaagtataattgatgttgctctgagtaaaggcttccaggt 366 ||||||| ||||||||||||||||| || || |||||||| Sbjct: 30262 aaagtatcattgatgttgctctgagcaagggtttccaggt 30301 Score = 81.8 bits (41), Expect = 3e-12 Identities = 99/117 (84%), Gaps = 1/117 (0%) Strand = Plus / Plus Query: 363 aggttgaggagcggctcgtgtccgtggatgagttgcttgatgctgatgaagtgttctgca 422 |||| |||||||| || ||||| || |||||| ||||||| |||||||| || ||||||| Sbjct: 30692 aggtcgaggagcgacttgtgtcagtagatgagctgcttgaagctgatgaggttttctgca 30751 Query: 423 cagggacccgccgttgtagtatctcctgtaggtagtatcacatatcaagggaaaagg 479 || ||| | || || ||||| |||||||| |||||||| || ||||||||||||||| Sbjct: 30752 ca-ggaactgctgtcgtagtgtctcctgtgggtagtattacctatcaagggaaaagg 30807 Score = 56.0 bits (28), Expect = 2e-04 Identities = 46/52 (88%) Strand = Plus / Plus Query: 2 cctgagtacacattcattatttttgcctcccctgttgggaactactttaagg 53 |||||||| || |||||||| |||| ||| ||||| |||||||||||||||| Sbjct: 28420 cctgagtatacgttcattatatttgtctcgcctgtggggaactactttaagg 28471
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 157 bits (79), Expect = 6e-35 Identities = 109/119 (91%) Strand = Plus / Plus Query: 151 ggtcttgatggcacagaagattgcaaaggagaaaggttattctgatgttctctacttgga 210 ||||||||||||||||||||||||||| || || || ||||||||||||||||||||||| Sbjct: 27561977 ggtcttgatggcacagaagattgcaaaagaaaagggctattctgatgttctctacttgga 27562036 Query: 211 tgctgttgagaaaaagtaccttgaagaagtatcttcgtgtaatatttttgttgtgaagg 269 ||||||| | |||||||| ||||||||||| ||||| ||||||||||||||||| |||| Sbjct: 27562037 tgctgttcacaaaaagtatcttgaagaagtttcttcatgtaatatttttgttgtcaagg 27562095 Score = 133 bits (67), Expect = 8e-28 Identities = 94/103 (91%) Strand = Plus / Plus Query: 51 aggaaggattagccccaataaatttgatagttgaagacaagtttcatcgggccacccctg 110 ||||||| ||||| ||||||||||||||||||||||| ||||||||||| || ||||||| Sbjct: 27561464 aggaaggtttagctccaataaatttgatagttgaagataagtttcatcgtgcaacccctg 27561523 Query: 111 gtggaactggaggtgttaagaccattgggaattatgcctcggt 153 ||||||||||| |||| |||||||| || |||||||||||||| Sbjct: 27561524 gtggaactggaagtgtgaagaccataggaaattatgcctcggt 27561566 Score = 127 bits (64), Expect = 5e-26 Identities = 91/100 (91%) Strand = Plus / Plus Query: 267 agggcaatgttatttcaactccagcaataaaaggaacaatactaccgggcatcacaagga 326 |||||||||| ||||||||||||||| |||||||||||||| | || ||||||||||||| Sbjct: 27562926 agggcaatgtcatttcaactccagcagtaaaaggaacaatattgccaggcatcacaagga 27562985 Query: 327 aaagtataattgatgttgctctgagtaaaggcttccaggt 366 ||||||| ||||||||||||||||| || || |||||||| Sbjct: 27562986 aaagtatcattgatgttgctctgagcaagggtttccaggt 27563025 Score = 81.8 bits (41), Expect = 3e-12 Identities = 99/117 (84%), Gaps = 1/117 (0%) Strand = Plus / Plus Query: 363 aggttgaggagcggctcgtgtccgtggatgagttgcttgatgctgatgaagtgttctgca 422 |||| |||||||| || ||||| || |||||| ||||||| |||||||| || ||||||| Sbjct: 27563416 aggtcgaggagcgacttgtgtcagtagatgagctgcttgaagctgatgaggttttctgca 27563475 Query: 423 cagggacccgccgttgtagtatctcctgtaggtagtatcacatatcaagggaaaagg 479 || ||| | || || ||||| |||||||| |||||||| || ||||||||||||||| Sbjct: 27563476 ca-ggaactgctgtcgtagtgtctcctgtgggtagtattacctatcaagggaaaagg 27563531 Score = 56.0 bits (28), Expect = 2e-04 Identities = 46/52 (88%) Strand = Plus / Plus Query: 2 cctgagtacacattcattatttttgcctcccctgttgggaactactttaagg 53 |||||||| || |||||||| |||| ||| ||||| |||||||||||||||| Sbjct: 27561144 cctgagtatacgttcattatatttgtctcgcctgtggggaactactttaagg 27561195
>gb|AC020666.8| Oryza sativa chromosome 10 BAC OSJNBa0082M15 genomic sequence, complete sequence Length = 158550 Score = 149 bits (75), Expect = 1e-32 Identities = 108/119 (90%) Strand = Plus / Minus Query: 151 ggtcttgatggcacagaagattgcaaaggagaaaggttattctgatgttctctacttgga 210 ||||||||||||||| ||||||||||| || || || ||||||||||||||||||||||| Sbjct: 61199 ggtcttgatggcacaaaagattgcaaaagaaaagggctattctgatgttctctacttgga 61140 Query: 211 tgctgttgagaaaaagtaccttgaagaagtatcttcgtgtaatatttttgttgtgaagg 269 ||||||| | |||||||| ||||||||||| ||||| ||||||||||||||||| |||| Sbjct: 61139 tgctgttcacaaaaagtatcttgaagaagtttcttcatgtaatatttttgttgtcaagg 61081 Score = 133 bits (67), Expect = 8e-28 Identities = 94/103 (91%) Strand = Plus / Minus Query: 51 aggaaggattagccccaataaatttgatagttgaagacaagtttcatcgggccacccctg 110 ||||||| ||||| ||||||||||||||||||||||| ||||||||||| || ||||||| Sbjct: 61707 aggaaggtttagctccaataaatttgatagttgaagataagtttcatcgtgcaacccctg 61648 Query: 111 gtggaactggaggtgttaagaccattgggaattatgcctcggt 153 ||||||||||| |||| |||||||| || |||||||||||||| Sbjct: 61647 gtggaactggaagtgtgaagaccataggaaattatgcctcggt 61605 Score = 127 bits (64), Expect = 5e-26 Identities = 91/100 (91%) Strand = Plus / Minus Query: 267 agggcaatgttatttcaactccagcaataaaaggaacaatactaccgggcatcacaagga 326 |||||||||| ||||||||||||||| |||||||||||||| | || ||||||||||||| Sbjct: 59982 agggcaatgtcatttcaactccagcagtaaaaggaacaatattgccaggcatcacaagga 59923 Query: 327 aaagtataattgatgttgctctgagtaaaggcttccaggt 366 ||||||| ||||||||||||||||| || || |||||||| Sbjct: 59922 aaagtatcattgatgttgctctgagcaagggtttccaggt 59883 Score = 73.8 bits (37), Expect = 6e-10 Identities = 98/117 (83%), Gaps = 1/117 (0%) Strand = Plus / Minus Query: 363 aggttgaggagcggctcgtgtccgtggatgagttgcttgatgctgatgaagtgttctgca 422 |||| |||||||| || ||||| || || ||| ||||||| |||||||| || ||||||| Sbjct: 59474 aggtcgaggagcgacttgtgtcagtagacgagctgcttgaagctgatgaggttttctgca 59415 Query: 423 cagggacccgccgttgtagtatctcctgtaggtagtatcacatatcaagggaaaagg 479 |||| || || || ||||| |||||||| |||||||| || ||||||||||||||| Sbjct: 59414 caggaact-gctgtcgtagtgtctcctgtgggtagtattacctatcaagggaaaagg 59359 Score = 63.9 bits (32), Expect = 6e-07 Identities = 47/52 (90%) Strand = Plus / Minus Query: 2 cctgagtacacattcattatttttgcctcccctgttgggaactactttaagg 53 |||||||| || |||||||| |||| ||||||||| |||||||||||||||| Sbjct: 62028 cctgagtatacgttcattatatttgtctcccctgtggggaactactttaagg 61977 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 538 tgacaagcctccagatgggccaggc 562 |||||||||| |||||||||||||| Sbjct: 58743 tgacaagcctgcagatgggccaggc 58719
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 149 bits (75), Expect = 1e-32 Identities = 108/119 (90%) Strand = Plus / Plus Query: 151 ggtcttgatggcacagaagattgcaaaggagaaaggttattctgatgttctctacttgga 210 ||||||||||||||| ||||||||||| || || || ||||||||||||||||||||||| Sbjct: 21003192 ggtcttgatggcacaaaagattgcaaaagaaaagggctattctgatgttctctacttgga 21003251 Query: 211 tgctgttgagaaaaagtaccttgaagaagtatcttcgtgtaatatttttgttgtgaagg 269 ||||||| | |||||||| ||||||||||| ||||| ||||||||||||||||| |||| Sbjct: 21003252 tgctgttcacaaaaagtatcttgaagaagtttcttcatgtaatatttttgttgtcaagg 21003310 Score = 133 bits (67), Expect = 8e-28 Identities = 94/103 (91%) Strand = Plus / Plus Query: 51 aggaaggattagccccaataaatttgatagttgaagacaagtttcatcgggccacccctg 110 ||||||| ||||| ||||||||||||||||||||||| ||||||||||| || ||||||| Sbjct: 21002684 aggaaggtttagctccaataaatttgatagttgaagataagtttcatcgtgcaacccctg 21002743 Query: 111 gtggaactggaggtgttaagaccattgggaattatgcctcggt 153 ||||||||||| |||| |||||||| || |||||||||||||| Sbjct: 21002744 gtggaactggaagtgtgaagaccataggaaattatgcctcggt 21002786 Score = 127 bits (64), Expect = 5e-26 Identities = 91/100 (91%) Strand = Plus / Plus Query: 267 agggcaatgttatttcaactccagcaataaaaggaacaatactaccgggcatcacaagga 326 |||||||||| ||||||||||||||| |||||||||||||| | || ||||||||||||| Sbjct: 21004409 agggcaatgtcatttcaactccagcagtaaaaggaacaatattgccaggcatcacaagga 21004468 Query: 327 aaagtataattgatgttgctctgagtaaaggcttccaggt 366 ||||||| ||||||||||||||||| || || |||||||| Sbjct: 21004469 aaagtatcattgatgttgctctgagcaagggtttccaggt 21004508 Score = 73.8 bits (37), Expect = 6e-10 Identities = 98/117 (83%), Gaps = 1/117 (0%) Strand = Plus / Plus Query: 363 aggttgaggagcggctcgtgtccgtggatgagttgcttgatgctgatgaagtgttctgca 422 |||| |||||||| || ||||| || || ||| ||||||| |||||||| || ||||||| Sbjct: 21004917 aggtcgaggagcgacttgtgtcagtagacgagctgcttgaagctgatgaggttttctgca 21004976 Query: 423 cagggacccgccgttgtagtatctcctgtaggtagtatcacatatcaagggaaaagg 479 |||| || || || ||||| |||||||| |||||||| || ||||||||||||||| Sbjct: 21004977 caggaact-gctgtcgtagtgtctcctgtgggtagtattacctatcaagggaaaagg 21005032 Score = 63.9 bits (32), Expect = 6e-07 Identities = 47/52 (90%) Strand = Plus / Plus Query: 2 cctgagtacacattcattatttttgcctcccctgttgggaactactttaagg 53 |||||||| || |||||||| |||| ||||||||| |||||||||||||||| Sbjct: 21002363 cctgagtatacgttcattatatttgtctcccctgtggggaactactttaagg 21002414 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 538 tgacaagcctccagatgggccaggc 562 |||||||||| |||||||||||||| Sbjct: 21005648 tgacaagcctgcagatgggccaggc 21005672
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 149 bits (75), Expect = 1e-32 Identities = 108/119 (90%) Strand = Plus / Plus Query: 151 ggtcttgatggcacagaagattgcaaaggagaaaggttattctgatgttctctacttgga 210 ||||||||||||||| ||||||||||| || || || ||||||||||||||||||||||| Sbjct: 21014456 ggtcttgatggcacaaaagattgcaaaagaaaagggctattctgatgttctctacttgga 21014515 Query: 211 tgctgttgagaaaaagtaccttgaagaagtatcttcgtgtaatatttttgttgtgaagg 269 ||||||| | |||||||| ||||||||||| ||||| ||||||||||||||||| |||| Sbjct: 21014516 tgctgttcacaaaaagtatcttgaagaagtttcttcatgtaatatttttgttgtcaagg 21014574 Score = 133 bits (67), Expect = 8e-28 Identities = 94/103 (91%) Strand = Plus / Plus Query: 51 aggaaggattagccccaataaatttgatagttgaagacaagtttcatcgggccacccctg 110 ||||||| ||||| ||||||||||||||||||||||| ||||||||||| || ||||||| Sbjct: 21013948 aggaaggtttagctccaataaatttgatagttgaagataagtttcatcgtgcaacccctg 21014007 Query: 111 gtggaactggaggtgttaagaccattgggaattatgcctcggt 153 ||||||||||| |||| |||||||| || |||||||||||||| Sbjct: 21014008 gtggaactggaagtgtgaagaccataggaaattatgcctcggt 21014050 Score = 127 bits (64), Expect = 5e-26 Identities = 91/100 (91%) Strand = Plus / Plus Query: 267 agggcaatgttatttcaactccagcaataaaaggaacaatactaccgggcatcacaagga 326 |||||||||| ||||||||||||||| |||||||||||||| | || ||||||||||||| Sbjct: 21015673 agggcaatgtcatttcaactccagcagtaaaaggaacaatattgccaggcatcacaagga 21015732 Query: 327 aaagtataattgatgttgctctgagtaaaggcttccaggt 366 ||||||| ||||||||||||||||| || || |||||||| Sbjct: 21015733 aaagtatcattgatgttgctctgagcaagggtttccaggt 21015772 Score = 73.8 bits (37), Expect = 6e-10 Identities = 98/117 (83%), Gaps = 1/117 (0%) Strand = Plus / Plus Query: 363 aggttgaggagcggctcgtgtccgtggatgagttgcttgatgctgatgaagtgttctgca 422 |||| |||||||| || ||||| || || ||| ||||||| |||||||| || ||||||| Sbjct: 21016181 aggtcgaggagcgacttgtgtcagtagacgagctgcttgaagctgatgaggttttctgca 21016240 Query: 423 cagggacccgccgttgtagtatctcctgtaggtagtatcacatatcaagggaaaagg 479 |||| || || || ||||| |||||||| |||||||| || ||||||||||||||| Sbjct: 21016241 caggaact-gctgtcgtagtgtctcctgtgggtagtattacctatcaagggaaaagg 21016296 Score = 63.9 bits (32), Expect = 6e-07 Identities = 47/52 (90%) Strand = Plus / Plus Query: 2 cctgagtacacattcattatttttgcctcccctgttgggaactactttaagg 53 |||||||| || |||||||| |||| ||||||||| |||||||||||||||| Sbjct: 21013627 cctgagtatacgttcattatatttgtctcccctgtggggaactactttaagg 21013678 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 538 tgacaagcctccagatgggccaggc 562 |||||||||| |||||||||||||| Sbjct: 21016912 tgacaagcctgcagatgggccaggc 21016936
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 101 bits (51), Expect = 3e-18 Identities = 84/95 (88%) Strand = Plus / Minus Query: 267 agggcaatgttatttcaactccagcaataaaaggaacaatactaccgggcatcacaagga 326 |||||||||||||||| |||||||||||||||||||| ||||| || || || ||||||| Sbjct: 355133 agggcaatgttatttctactccagcaataaaaggaaccatactgcctggtataacaagga 355074 Query: 327 aaagtataattgatgttgctctgagtaaaggcttc 361 ||||||| |||| ||||||| ||| ||||||||| Sbjct: 355073 aaagtattcttgaagttgctcagagaaaaggcttc 355039 Score = 65.9 bits (33), Expect = 2e-07 Identities = 54/61 (88%) Strand = Plus / Minus Query: 363 aggttgaggagcggctcgtgtccgtggatgagttgcttgatgctgatgaagtgttctgca 422 ||||||||||||| || ||||| ||||||||| | ||||| ||||||||||| ||||||| Sbjct: 354734 aggttgaggagcgccttgtgtcagtggatgagcttcttgaagctgatgaagttttctgca 354675 Query: 423 c 423 | Sbjct: 354674 c 354674 Score = 54.0 bits (27), Expect = 6e-04 Identities = 84/103 (81%) Strand = Plus / Minus Query: 51 aggaaggattagccccaataaatttgatagttgaagacaagtttcatcgggccacccctg 110 ||||||| |||||||| || || ||||| | ||||| || ||||| || || |||||| Sbjct: 356173 aggaaggtttagcccctattaacttgattatagaagaaaactttcaccgtgctgcccctg 356114 Query: 111 gtggaactggaggtgttaagaccattgggaattatgcctcggt 153 |||||||||| || || || |||||||| || ||||||||||| Sbjct: 356113 gtggaactggcggagtgaaaaccattggaaactatgcctcggt 356071 Score = 48.1 bits (24), Expect = 0.037 Identities = 39/44 (88%) Strand = Plus / Minus Query: 2 cctgagtacacattcattatttttgcctcccctgttgggaacta 45 |||||||| || || || ||||||| |||||||||||||||||| Sbjct: 356468 cctgagtatacctttatgatttttgtctcccctgttgggaacta 356425 Score = 44.1 bits (22), Expect = 0.58 Identities = 55/66 (83%) Strand = Plus / Minus Query: 491 tggcaagcaaggagtcggcgctgtgtctcagcaattgtacacctcgctgacaagcctcca 550 |||||| |||||||| |||| |||| |||||| |||| || || || ||||||||||| Sbjct: 353974 tggcaaccaaggagtgggcgtggtgtgtcagcagctgtatacttcacttacaagcctcca 353915 Query: 551 gatggg 556 |||||| Sbjct: 353914 gatggg 353909
>gb|AC107224.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0009C08, complete sequence Length = 137033 Score = 101 bits (51), Expect = 3e-18 Identities = 84/95 (88%) Strand = Plus / Minus Query: 267 agggcaatgttatttcaactccagcaataaaaggaacaatactaccgggcatcacaagga 326 |||||||||||||||| |||||||||||||||||||| ||||| || || || ||||||| Sbjct: 82661 agggcaatgttatttctactccagcaataaaaggaaccatactgcctggtataacaagga 82602 Query: 327 aaagtataattgatgttgctctgagtaaaggcttc 361 ||||||| |||| ||||||| ||| ||||||||| Sbjct: 82601 aaagtattcttgaagttgctcagagaaaaggcttc 82567 Score = 65.9 bits (33), Expect = 2e-07 Identities = 54/61 (88%) Strand = Plus / Minus Query: 363 aggttgaggagcggctcgtgtccgtggatgagttgcttgatgctgatgaagtgttctgca 422 ||||||||||||| || ||||| ||||||||| | ||||| ||||||||||| ||||||| Sbjct: 82262 aggttgaggagcgccttgtgtcagtggatgagcttcttgaagctgatgaagttttctgca 82203 Query: 423 c 423 | Sbjct: 82202 c 82202 Score = 54.0 bits (27), Expect = 6e-04 Identities = 84/103 (81%) Strand = Plus / Minus Query: 51 aggaaggattagccccaataaatttgatagttgaagacaagtttcatcgggccacccctg 110 ||||||| |||||||| || || ||||| | ||||| || ||||| || || |||||| Sbjct: 83701 aggaaggtttagcccctattaacttgattatagaagaaaactttcaccgtgctgcccctg 83642 Query: 111 gtggaactggaggtgttaagaccattgggaattatgcctcggt 153 |||||||||| || || || |||||||| || ||||||||||| Sbjct: 83641 gtggaactggcggagtgaaaaccattggaaactatgcctcggt 83599 Score = 48.1 bits (24), Expect = 0.037 Identities = 39/44 (88%) Strand = Plus / Minus Query: 2 cctgagtacacattcattatttttgcctcccctgttgggaacta 45 |||||||| || || || ||||||| |||||||||||||||||| Sbjct: 83996 cctgagtatacctttatgatttttgtctcccctgttgggaacta 83953 Score = 44.1 bits (22), Expect = 0.58 Identities = 55/66 (83%) Strand = Plus / Minus Query: 491 tggcaagcaaggagtcggcgctgtgtctcagcaattgtacacctcgctgacaagcctcca 550 |||||| |||||||| |||| |||| |||||| |||| || || || ||||||||||| Sbjct: 81502 tggcaaccaaggagtgggcgtggtgtgtcagcagctgtatacttcacttacaagcctcca 81443 Query: 551 gatggg 556 |||||| Sbjct: 81442 gatggg 81437
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 101 bits (51), Expect = 3e-18 Identities = 84/95 (88%) Strand = Plus / Minus Query: 267 agggcaatgttatttcaactccagcaataaaaggaacaatactaccgggcatcacaagga 326 |||||||||||||||| |||||||||||||||||||| ||||| || || || ||||||| Sbjct: 355131 agggcaatgttatttctactccagcaataaaaggaaccatactgcctggtataacaagga 355072 Query: 327 aaagtataattgatgttgctctgagtaaaggcttc 361 ||||||| |||| ||||||| ||| ||||||||| Sbjct: 355071 aaagtattcttgaagttgctcagagaaaaggcttc 355037 Score = 65.9 bits (33), Expect = 2e-07 Identities = 54/61 (88%) Strand = Plus / Minus Query: 363 aggttgaggagcggctcgtgtccgtggatgagttgcttgatgctgatgaagtgttctgca 422 ||||||||||||| || ||||| ||||||||| | ||||| ||||||||||| ||||||| Sbjct: 354732 aggttgaggagcgccttgtgtcagtggatgagcttcttgaagctgatgaagttttctgca 354673 Query: 423 c 423 | Sbjct: 354672 c 354672 Score = 54.0 bits (27), Expect = 6e-04 Identities = 84/103 (81%) Strand = Plus / Minus Query: 51 aggaaggattagccccaataaatttgatagttgaagacaagtttcatcgggccacccctg 110 ||||||| |||||||| || || ||||| | ||||| || ||||| || || |||||| Sbjct: 356171 aggaaggtttagcccctattaacttgattatagaagaaaactttcaccgtgctgcccctg 356112 Query: 111 gtggaactggaggtgttaagaccattgggaattatgcctcggt 153 |||||||||| || || || |||||||| || ||||||||||| Sbjct: 356111 gtggaactggcggagtgaaaaccattggaaactatgcctcggt 356069 Score = 48.1 bits (24), Expect = 0.037 Identities = 39/44 (88%) Strand = Plus / Minus Query: 2 cctgagtacacattcattatttttgcctcccctgttgggaacta 45 |||||||| || || || ||||||| |||||||||||||||||| Sbjct: 356466 cctgagtatacctttatgatttttgtctcccctgttgggaacta 356423 Score = 44.1 bits (22), Expect = 0.58 Identities = 55/66 (83%) Strand = Plus / Minus Query: 491 tggcaagcaaggagtcggcgctgtgtctcagcaattgtacacctcgctgacaagcctcca 550 |||||| |||||||| |||| |||| |||||| |||| || || || ||||||||||| Sbjct: 353972 tggcaaccaaggagtgggcgtggtgtgtcagcagctgtatacttcacttacaagcctcca 353913 Query: 551 gatggg 556 |||||| Sbjct: 353912 gatggg 353907
>gb|AF193845.1|AF193845 Solanum tuberosum branched-chain amino acid aminotransferase (BCAT1) mRNA, complete cds Length = 1683 Score = 89.7 bits (45), Expect = 1e-14 Identities = 120/145 (82%) Strand = Plus / Plus Query: 282 caactccagcaataaaaggaacaatactaccgggcatcacaaggaaaagtataattgatg 341 ||||||| ||||| |||||||| || || || || |||||| | || || |||||||| | Sbjct: 1059 caactcctgcaattaaaggaaccattcttcctggtatcacacgaaagagcataattgacg 1118 Query: 342 ttgctctgagtaaaggcttccaggttgaggagcggctcgtgtccgtggatgagttgcttg 401 | ||| | || |||| ||||||||||| || |||| ||||| ||||| || ||||||| Sbjct: 1119 tagctttaagccaagggttccaggttgaagaacggcaagtgtctgtggacgaattgcttg 1178 Query: 402 atgctgatgaagtgttctgcacagg 426 ||||||||||||||||||||||||| Sbjct: 1179 atgctgatgaagtgttctgcacagg 1203 Score = 46.1 bits (23), Expect = 0.15 Identities = 118/147 (80%), Gaps = 2/147 (1%) Strand = Plus / Plus Query: 2 cctgagtacacattcattatttttgcctcccctgttgggaactactttaaggaaggatta 61 ||||||||||||||| | |||| || || ||||| || || || ||||||||||| | Sbjct: 779 cctgagtacacattcctgatttatgtatcacctgtgggaaattattttaaggaaggtatg 838 Query: 62 gccccaataaatttgatagttgaagaca-agtttcatcgggccacccctggtggaactgg 120 || |||||||||||| || |||| |||| | | ||||| || || |||||||| ||||| Sbjct: 839 gcaccaataaatttggtaattga-gacagaaatgcatcgcgcaactcctggtggtactgg 897 Query: 121 aggtgttaagaccattgggaattatgc 147 |||||| ||||| || || |||||||| Sbjct: 898 aggtgtcaagactatcggaaattatgc 924
>dbj|AP006101.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT09A07, TM0181, complete sequence Length = 185320 Score = 69.9 bits (35), Expect = 1e-08 Identities = 56/63 (88%) Strand = Plus / Minus Query: 361 ccaggttgaggagcggctcgtgtccgtggatgagttgcttgatgctgatgaagtgttctg 420 ||||||||||||||| || ||||| |||||||| ||||| ||||||||||| || ||||| Sbjct: 11358 ccaggttgaggagcgactagtgtcagtggatgaattgctagatgctgatgaggttttctg 11299 Query: 421 cac 423 ||| Sbjct: 11298 cac 11296 Score = 58.0 bits (29), Expect = 4e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 95 catcgggccacccctggtggaactggaggtgttaagaccattgggaattatgc 147 |||||||| || |||||||| ||||||||||| ||||||||||| || ||||| Sbjct: 14559 catcgggcaactcctggtggcactggaggtgtgaagaccattggcaactatgc 14507 Score = 46.1 bits (23), Expect = 0.15 Identities = 56/67 (83%) Strand = Plus / Minus Query: 278 atttcaactccagcaataaaaggaacaatactaccgggcatcacaaggaaaagtataatt 337 ||||||||||| || | |||||||| || ||||| ||||| || | |||||||||||| Sbjct: 12160 atttcaactcctgctgttaaaggaactatcctacctggcattactcgaaaaagtataatt 12101 Query: 338 gatgttg 344 ||||||| Sbjct: 12100 gatgttg 12094 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Minus Query: 32 cctgttgggaactactttaagg 53 |||||||||||||||||||||| Sbjct: 15098 cctgttgggaactactttaagg 15077 Score = 40.1 bits (20), Expect = 9.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 242 tcttcgtgtaatatttttgttgtgaagg 269 ||||| ||||||||||||||||| |||| Sbjct: 14007 tcttcctgtaatatttttgttgttaagg 13980
>gb|AF193846.1|AF193846 Solanum tuberosum branched-chain amino acid aminotransferase (BCAT2) mRNA, complete cds Length = 1700 Score = 67.9 bits (34), Expect = 4e-08 Identities = 104/126 (82%), Gaps = 1/126 (0%) Strand = Plus / Plus Query: 354 aaggcttccaggttgaggagcggctcgtgtccgtggatgagttgcttgatgctgatgaag 413 |||| |||||||||||||| || | ||||| ||||| || ||||||||||||||||||| Sbjct: 1232 aaggattccaggttgaggaacgacaggtgtctgtggacgaattgcttgatgctgatgaag 1291 Query: 414 tgttctgcacagggacccgccgttgtagtatctcctgtaggtagtatcacatatcaaggg 473 | ||||| || |||| | || || || ||||||||||| ||||| || || |||||||| Sbjct: 1292 ttttctgtac-gggaactgcagtggttgtatctcctgttggtagcattactcatcaaggg 1350 Query: 474 aaaagg 479 | |||| Sbjct: 1351 agaagg 1356 Score = 46.1 bits (23), Expect = 0.15 Identities = 62/75 (82%) Strand = Plus / Plus Query: 2 cctgagtacacattcattatttttgcctcccctgttgggaactactttaaggaaggatta 61 ||||||||||||||| | |||| || || |||||||| || || ||||||||||| || Sbjct: 880 cctgagtacacattcctgatttatgtgtcacctgttggaaattattttaaggaaggtttg 939 Query: 62 gccccaataaatttg 76 || ||||| |||||| Sbjct: 940 gcaccaattaatttg 954
>gb|BT009368.1| Triticum aestivum clone wlm96.pk027.n2:fis, full insert mRNA sequence Length = 1514 Score = 65.9 bits (33), Expect = 2e-07 Identities = 183/233 (78%) Strand = Plus / Plus Query: 107 cctggtggaactggaggtgttaagaccattgggaattatgcctcggtcttgatggcacag 166 |||||||||||||| | | ||||||| ||||| |||||||| ||||| | | || ||| Sbjct: 707 cctggtggaactggtgatattaagacaattggaaattatgcttcggttgttagtgctcag 766 Query: 167 aagattgcaaaggagaaaggttattctgatgttctctacttggatgctgttgagaaaaag 226 | | || |||||||||||| ||||||||||||| ||||||||| | || | || ||| Sbjct: 767 agaagagccaaggagaaaggtcattctgatgttctttacttggatcccgtgcataagaag 826 Query: 227 taccttgaagaagtatcttcgtgtaatatttttgttgtgaagggcaatgttatttcaact 286 | | || ||||| ||||| |||||||| || | ||||||| ||||||||||| ||| Sbjct: 827 tttgtggaggaagtttcttcctgtaatatattgatggtgaaggataatgttatttctact 886 Query: 287 ccagcaataaaaggaacaatactaccgggcatcacaaggaaaagtataattga 339 ||| | ||| |||||||| || || || |||||||| | |||||||||||| Sbjct: 887 ccactattaacgggaacaattcttcctggaatcacaagaagaagtataattga 939 Score = 58.0 bits (29), Expect = 4e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 389 gatgagttgcttgatgctgatgaagtgttctgcacagggac 429 |||||||||||||| ||||||||||| ||||| |||||||| Sbjct: 989 gatgagttgcttgacgctgatgaagtcttctgtacagggac 1029
>dbj|D64052.1| Nicotiana tabacum mRNA for cytochrome P450 like_TBP, complete cds Length = 2010 Score = 63.9 bits (32), Expect = 6e-07 Identities = 47/52 (90%) Strand = Plus / Minus Query: 363 aggttgaggagcggctcgtgtccgtggatgagttgcttgatgctgatgaagt 414 |||||||||| || || ||||||||||| || |||||||||||||||||||| Sbjct: 1333 aggttgaggaacgactggtgtccgtggacgaattgcttgatgctgatgaagt 1282
>dbj|AB026249.1| Lithospermum erythrorhizon mRNA for branched-chain amino acid aminotransferase, partial cds Length = 390 Score = 54.0 bits (27), Expect = 6e-04 Identities = 54/63 (85%) Strand = Plus / Plus Query: 231 ttgaagaagtatcttcgtgtaatatttttgttgtgaagggcaatgttatttcaactccag 290 |||| ||||| || || ||||| ||||||||||| ||||| |||||||| ||||| |||| Sbjct: 127 ttgaggaagtctcatcttgtaacatttttgttgtcaagggtaatgttatatcaacaccag 186 Query: 291 caa 293 ||| Sbjct: 187 caa 189
>emb|AJ236562.1|OEU236562 Olea europaea RAPD genomic sequence, clone 127f Length = 1724 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 389 gatgagttgcttgatgctgatgaagt 414 |||||||||||||||||||||||||| Sbjct: 509 gatgagttgcttgatgctgatgaagt 484 Score = 48.1 bits (24), Expect = 0.037 Identities = 66/80 (82%) Strand = Plus / Minus Query: 267 agggcaatgttatttcaactccagcaataaaaggaacaatactaccgggcatcacaagga 326 |||| |||||||| | ||||| ||||||||||| || || || || ||||| ||| | | Sbjct: 1122 agggtaatgttatatttactcctgcaataaaagggaccatcctgcctggcattacacgaa 1063 Query: 327 aaagtataattgatgttgct 346 | |||||||||||||||||| Sbjct: 1062 agagtataattgatgttgct 1043
>ref|NM_125975.2| Arabidopsis thaliana branched-chain-amino-acid transaminase/ catalytic AT5G65780 mRNA, complete cds Length = 2275 Score = 48.1 bits (24), Expect = 0.037 Identities = 69/84 (82%) Strand = Plus / Plus Query: 116 actggaggtgttaagaccattgggaattatgcctcggtcttgatggcacagaagattgca 175 |||||||||||||| ||||| || |||||||| | ||||||| ||| ||| |||||| Sbjct: 1627 actggaggtgttaaaaccatcggtaattatgctgcagtcttgaaggctcagtcgattgcg 1686 Query: 176 aaggagaaaggttattctgatgtt 199 || | ||||| |||||||||||| Sbjct: 1687 aaagctaaagggtattctgatgtt 1710 Score = 40.1 bits (20), Expect = 9.0 Identities = 47/56 (83%) Strand = Plus / Plus Query: 2 cctgagtacacattcattatttttgcctcccctgttgggaactactttaaggaagg 57 ||||| ||||| ||| |||| |||| || ||||| ||||||||||| |||||||| Sbjct: 1513 cctgaatacactttccttatctttgtttcacctgtcgggaactacttcaaggaagg 1568
>ref|NM_114828.3| Arabidopsis thaliana branched-chain-amino-acid transaminase/ catalytic AT3G49680 mRNA, complete cds Length = 1567 Score = 48.1 bits (24), Expect = 0.037 Identities = 93/116 (80%) Strand = Plus / Plus Query: 32 cctgttgggaactactttaaggaaggattagccccaataaatttgatagttgaagacaag 91 ||||||||||||||||| |||||||| | || || || |||||||| || || | | Sbjct: 788 cctgttgggaactacttcaaggaaggtgtggcacctatcaatttgattgtggagaatgaa 847 Query: 92 tttcatcgggccacccctggtggaactggaggtgttaagaccattgggaattatgc 147 ||||| || || || |||||||| || ||||||||||| ||||| || |||||||| Sbjct: 848 tttcaccgtgcaactcctggtggtaccggaggtgttaaaaccataggcaattatgc 903
>ref|XM_473479.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1233 Score = 48.1 bits (24), Expect = 0.037 Identities = 30/32 (93%) Strand = Plus / Plus Query: 389 gatgagttgcttgatgctgatgaagtgttctg 420 |||||||||||||| ||||||||||| ||||| Sbjct: 1027 gatgagttgcttgacgctgatgaagttttctg 1058 Score = 48.1 bits (24), Expect = 0.037 Identities = 33/36 (91%) Strand = Plus / Plus Query: 176 aaggagaaaggttattctgatgttctctacttggat 211 ||||||| |||| ||||||||||||| ||||||||| Sbjct: 814 aaggagagaggtcattctgatgttctttacttggat 849
>emb|AL606687.3|OSJN00087 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0084K11, complete sequence Length = 147806 Score = 48.1 bits (24), Expect = 0.037 Identities = 33/36 (91%) Strand = Plus / Minus Query: 176 aaggagaaaggttattctgatgttctctacttggat 211 ||||||| |||| ||||||||||||| ||||||||| Sbjct: 8964 aaggagagaggtcattctgatgttctttacttggat 8929 Score = 48.1 bits (24), Expect = 0.037 Identities = 30/32 (93%) Strand = Plus / Minus Query: 389 gatgagttgcttgatgctgatgaagtgttctg 420 |||||||||||||| ||||||||||| ||||| Sbjct: 8073 gatgagttgcttgacgctgatgaagttttctg 8042
>emb|AL606682.3|OSJN00085 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0065O17, complete sequence Length = 167269 Score = 48.1 bits (24), Expect = 0.037 Identities = 33/36 (91%) Strand = Plus / Minus Query: 176 aaggagaaaggttattctgatgttctctacttggat 211 ||||||| |||| ||||||||||||| ||||||||| Sbjct: 164592 aaggagagaggtcattctgatgttctttacttggat 164557 Score = 48.1 bits (24), Expect = 0.037 Identities = 30/32 (93%) Strand = Plus / Minus Query: 389 gatgagttgcttgatgctgatgaagtgttctg 420 |||||||||||||| ||||||||||| ||||| Sbjct: 163701 gatgagttgcttgacgctgatgaagttttctg 163670
>emb|AJ293804.1|ATH293804 Arabidopsis thaliana mRNA for branched-chain amino acid transaminase 5 (bcat5 gene) Length = 1973 Score = 48.1 bits (24), Expect = 0.037 Identities = 69/84 (82%) Strand = Plus / Plus Query: 116 actggaggtgttaagaccattgggaattatgcctcggtcttgatggcacagaagattgca 175 |||||||||||||| ||||| || |||||||| | ||||||| ||| ||| |||||| Sbjct: 1339 actggaggtgttaaaaccatcggtaattatgctgcagtcttgaaggctcagtcgattgcg 1398 Query: 176 aaggagaaaggttattctgatgtt 199 || | ||||| |||||||||||| Sbjct: 1399 aaagctaaagggtattctgatgtt 1422 Score = 40.1 bits (20), Expect = 9.0 Identities = 47/56 (83%) Strand = Plus / Plus Query: 2 cctgagtacacattcattatttttgcctcccctgttgggaactactttaaggaagg 57 ||||| ||||| ||| |||| |||| || ||||| ||||||||||| |||||||| Sbjct: 1225 cctgaatacactttccttatctttgtttcacctgtcgggaactacttcaaggaagg 1280
>emb|AJ276124.1|ATH276124 Arabidopsis thaliana mRNA for branched-chain amino acid transaminase 3 (bcat3 gene) Length = 1539 Score = 48.1 bits (24), Expect = 0.037 Identities = 93/116 (80%) Strand = Plus / Plus Query: 32 cctgttgggaactactttaaggaaggattagccccaataaatttgatagttgaagacaag 91 ||||||||||||||||| |||||||| | || || || |||||||| || || | | Sbjct: 772 cctgttgggaactacttcaaggaaggtgtggcacctatcaatttgattgtggagaatgaa 831 Query: 92 tttcatcgggccacccctggtggaactggaggtgttaagaccattgggaattatgc 147 ||||| || || || |||||||| || ||||||||||| ||||| || |||||||| Sbjct: 832 tttcaccgtgcaactcctggtggtaccggaggtgttaaaaccataggcaattatgc 887
>gb|AY097417.1| Arabidopsis thaliana AT3g49680/T16K5_30 mRNA, complete cds Length = 1242 Score = 48.1 bits (24), Expect = 0.037 Identities = 93/116 (80%) Strand = Plus / Plus Query: 32 cctgttgggaactactttaaggaaggattagccccaataaatttgatagttgaagacaag 91 ||||||||||||||||| |||||||| | || || || |||||||| || || | | Sbjct: 679 cctgttgggaactacttcaaggaaggtgtggcacctatcaatttgattgtggagaatgaa 738 Query: 92 tttcatcgggccacccctggtggaactggaggtgttaagaccattgggaattatgc 147 ||||| || || || |||||||| || ||||||||||| ||||| || |||||||| Sbjct: 739 tttcaccgtgcaactcctggtggtaccggaggtgttaaaaccataggcaattatgc 794
>gb|AF446355.1|AF446355 Arabidopsis thaliana AT3g49680/T16K5_30 mRNA, complete cds Length = 1511 Score = 48.1 bits (24), Expect = 0.037 Identities = 93/116 (80%) Strand = Plus / Plus Query: 32 cctgttgggaactactttaaggaaggattagccccaataaatttgatagttgaagacaag 91 ||||||||||||||||| |||||||| | || || || |||||||| || || | | Sbjct: 770 cctgttgggaactacttcaaggaaggtgtggcacctatcaatttgattgtggagaatgaa 829 Query: 92 tttcatcgggccacccctggtggaactggaggtgttaagaccattgggaattatgc 147 ||||| || || || |||||||| || ||||||||||| ||||| || |||||||| Sbjct: 830 tttcaccgtgcaactcctggtggtaccggaggtgttaaaaccataggcaattatgc 885
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 48.1 bits (24), Expect = 0.037 Identities = 33/36 (91%) Strand = Plus / Minus Query: 176 aaggagaaaggttattctgatgttctctacttggat 211 ||||||| |||| ||||||||||||| ||||||||| Sbjct: 28001739 aaggagagaggtcattctgatgttctttacttggat 28001704 Score = 48.1 bits (24), Expect = 0.037 Identities = 30/32 (93%) Strand = Plus / Minus Query: 389 gatgagttgcttgatgctgatgaagtgttctg 420 |||||||||||||| ||||||||||| ||||| Sbjct: 28000848 gatgagttgcttgacgctgatgaagttttctg 28000817
>emb|BX824847.1|CNS0A7CH Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH77ZA12 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1498 Score = 48.1 bits (24), Expect = 0.037 Identities = 93/116 (80%) Strand = Plus / Plus Query: 32 cctgttgggaactactttaaggaaggattagccccaataaatttgatagttgaagacaag 91 ||||||||||||||||| |||||||| | || || || |||||||| || || | | Sbjct: 759 cctgttgggaactacttcaaggaaggtgtggcacctatcaatttgattgtggagaatgaa 818 Query: 92 tttcatcgggccacccctggtggaactggaggtgttaagaccattgggaattatgc 147 ||||| || || || |||||||| || ||||||||||| ||||| || |||||||| Sbjct: 819 tttcaccgtgcaactcctggtggtaccggaggtgttaaaaccataggcaattatgc 874
>emb|BX822562.1|CNS0A630 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB49ZD05 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1368 Score = 48.1 bits (24), Expect = 0.037 Identities = 93/116 (80%) Strand = Plus / Plus Query: 32 cctgttgggaactactttaaggaaggattagccccaataaatttgatagttgaagacaag 91 ||||||||||||||||| |||||||| | || || || |||||||| || || | | Sbjct: 669 cctgttgggaactacttcaaggaaggtgtggcacctatcaatttgattgtggagaatgaa 728 Query: 92 tttcatcgggccacccctggtggaactggaggtgttaagaccattgggaattatgc 147 ||||| || || || |||||||| || ||||||||||| ||||| || |||||||| Sbjct: 729 tttcaccgtgcaactcctggtggtaccggaggtgttaaaaccataggcaattatgc 784
>emb|BX831860.1|CNS09ZQO Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH35ZC09 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1362 Score = 48.1 bits (24), Expect = 0.037 Identities = 69/84 (82%) Strand = Plus / Plus Query: 116 actggaggtgttaagaccattgggaattatgcctcggtcttgatggcacagaagattgca 175 |||||||||||||| ||||| || |||||||| | ||||||| ||| ||| |||||| Sbjct: 787 actggaggtgttaaaaccatcggtaattatgctgcagtcttgaaggctcagtcgattgcg 846 Query: 176 aaggagaaaggttattctgatgtt 199 || | ||||| |||||||||||| Sbjct: 847 aaagctaaagggtattctgatgtt 870 Score = 40.1 bits (20), Expect = 9.0 Identities = 47/56 (83%) Strand = Plus / Plus Query: 2 cctgagtacacattcattatttttgcctcccctgttgggaactactttaaggaagg 57 ||||| ||||| ||| |||| |||| || ||||| ||||||||||| |||||||| Sbjct: 673 cctgaatacactttccttatctttgtttcacctgtcgggaactacttcaaggaagg 728
>emb|BX831049.1|CNS09ZFT Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS53ZC10 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1320 Score = 48.1 bits (24), Expect = 0.037 Identities = 69/84 (82%) Strand = Plus / Plus Query: 116 actggaggtgttaagaccattgggaattatgcctcggtcttgatggcacagaagattgca 175 |||||||||||||| ||||| || |||||||| | ||||||| ||| ||| |||||| Sbjct: 787 actggaggtgttaaaaccatcggtaattatgctgcagtcttgaaggctcagtcgattgcg 846 Query: 176 aaggagaaaggttattctgatgtt 199 || | ||||| |||||||||||| Sbjct: 847 aaagctaaagggtattctgatgtt 870 Score = 40.1 bits (20), Expect = 9.0 Identities = 47/56 (83%) Strand = Plus / Plus Query: 2 cctgagtacacattcattatttttgcctcccctgttgggaactactttaaggaagg 57 ||||| ||||| ||| |||| |||| || ||||| ||||||||||| |||||||| Sbjct: 673 cctgaatacactttccttatctttgtttcacctgtcgggaactacttcaaggaagg 728
>gb|AY087619.1| Arabidopsis thaliana clone 37100 mRNA, complete sequence Length = 1544 Score = 48.1 bits (24), Expect = 0.037 Identities = 93/116 (80%) Strand = Plus / Plus Query: 32 cctgttgggaactactttaaggaaggattagccccaataaatttgatagttgaagacaag 91 ||||||||||||||||| |||||||| | || || || |||||||| || || | | Sbjct: 777 cctgttgggaactacttcaaggaaggtgtggcacctatcaatttgattgtggagaatgaa 836 Query: 92 tttcatcgggccacccctggtggaactggaggtgttaagaccattgggaattatgc 147 ||||| || || || |||||||| || ||||||||||| ||||| || |||||||| Sbjct: 837 tttcaccgtgcaactcctggtggtaccggaggtgttaaaaccataggcaattatgc 892
>dbj|AK106376.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-102-D03, full insert sequence Length = 1674 Score = 48.1 bits (24), Expect = 0.037 Identities = 30/32 (93%) Strand = Plus / Plus Query: 389 gatgagttgcttgatgctgatgaagtgttctg 420 |||||||||||||| ||||||||||| ||||| Sbjct: 1223 gatgagttgcttgacgctgatgaagttttctg 1254 Score = 48.1 bits (24), Expect = 0.037 Identities = 33/36 (91%) Strand = Plus / Plus Query: 176 aaggagaaaggttattctgatgttctctacttggat 211 ||||||| |||| ||||||||||||| ||||||||| Sbjct: 1010 aaggagagaggtcattctgatgttctttacttggat 1045
>dbj|AK062472.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-103-E12, full insert sequence Length = 656 Score = 48.1 bits (24), Expect = 0.037 Identities = 30/32 (93%) Strand = Plus / Plus Query: 389 gatgagttgcttgatgctgatgaagtgttctg 420 |||||||||||||| ||||||||||| ||||| Sbjct: 71 gatgagttgcttgacgctgatgaagttttctg 102
>gb|AC159872.12| Medicago truncatula clone mth2-29k12, complete sequence Length = 117971 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Plus Query: 404 gctgatgaagtgttctgcacagg 426 ||||||||||||||||||||||| Sbjct: 94703 gctgatgaagtgttctgcacagg 94725
>gb|BT017455.1| Zea mays clone EL01N0407A06.c mRNA sequence Length = 421 Score = 44.1 bits (22), Expect = 0.58 Identities = 82/102 (80%) Strand = Plus / Plus Query: 498 caaggagtcggcgctgtgtctcagcaattgtacacctcgctgacaagcctccagatgggc 557 ||||| || |||| |||||| ||||| ||||||| || ||||| || || |||||||| Sbjct: 7 caaggtgttggcgttgtgtcccagcagctgtacacttcactgacgagtcttcagatgggt 66 Query: 558 caggcggaggacagcatgggctggaccgtgcagctgaattag 599 || | ||||| | ||||||||||| ||||| ||||||||| Sbjct: 67 caaaccgaggattggatgggctggactgtgcaactgaattag 108
>gb|DQ301697.1| Ceratobasidium sp. AG-B(o) RNA polymerase II second largest subunit (RPB2) gene, partial sequence Length = 650 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Minus Query: 392 gagttgcttgatgctgatgaag 413 |||||||||||||||||||||| Sbjct: 281 gagttgcttgatgctgatgaag 260
>gb|DQ301695.1| Ceratobasidium sp. AG-A RNA polymerase II second largest subunit (RPB2) gene, partial sequence Length = 613 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Plus Query: 392 gagttgcttgatgctgatgaag 413 |||||||||||||||||||||| Sbjct: 430 gagttgcttgatgctgatgaag 451
>emb|CT573020.1| Medicago truncatula chromosome 5 clone mth2-83i12, COMPLETE SEQUENCE Length = 92109 Score = 44.1 bits (22), Expect = 0.58 Identities = 34/38 (89%) Strand = Plus / Plus Query: 110 ggtggaactggaggtgttaagaccattgggaattatgc 147 ||||| ||||||||||| ||||||||||| || ||||| Sbjct: 77983 ggtggcactggaggtgtgaagaccattggaaactatgc 78020 Score = 42.1 bits (21), Expect = 2.3 Identities = 66/81 (81%) Strand = Plus / Plus Query: 267 agggcaatgttatttcaactccagcaataaaaggaacaatactaccgggcatcacaagga 326 |||| |||||||||||||||||| | || ||||| || || || || ||||| || | | Sbjct: 79631 agggtaatgttatttcaactccatccatcaaagggactatcctgcctggcattactcgaa 79690 Query: 327 aaagtataattgatgttgctc 347 | ||||||||||| ||||||| Sbjct: 79691 agagtataattgacgttgctc 79711
>gb|AC163722.6| Mus musculus BAC clone RP23-447O11 from chromosome 19, complete sequence Length = 178562 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 322 aaggaaaagtataattgatgt 342 ||||||||||||||||||||| Sbjct: 88314 aaggaaaagtataattgatgt 88334
>gb|AC162035.5| Mus musculus chromosome 18, clone RP23-434N7, complete sequence Length = 200472 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 169 gattgcaaaggagaaaggttattct 193 |||||||||||||| |||||||||| Sbjct: 17484 gattgcaaaggagagaggttattct 17460
>emb|AL132964.2|ATT9C5 Arabidopsis thaliana DNA chromosome 3, BAC clone T9C5 Length = 104204 Score = 42.1 bits (21), Expect = 2.3 Identities = 36/41 (87%) Strand = Plus / Plus Query: 107 cctggtggaactggaggtgttaagaccattgggaattatgc 147 |||||||| || ||||||||||| ||||| || |||||||| Sbjct: 100177 cctggtggtaccggaggtgttaaaaccataggcaattatgc 100217
>emb|AL132965.1|ATT16K5 Arabidopsis thaliana DNA chromosome 3, BAC clone T16K5 Length = 97711 Score = 42.1 bits (21), Expect = 2.3 Identities = 36/41 (87%) Strand = Plus / Plus Query: 107 cctggtggaactggaggtgttaagaccattgggaattatgc 147 |||||||| || ||||||||||| ||||| || |||||||| Sbjct: 14277 cctggtggtaccggaggtgttaaaaccataggcaattatgc 14317
>gb|AC027006.8| Homo sapiens chromosome 8, clone RP11-185G5, complete sequence Length = 101138 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 286 tccagcaataaaaggaacaat 306 ||||||||||||||||||||| Sbjct: 48559 tccagcaataaaaggaacaat 48539
>gb|AF003625.2| Homo sapiens chromosome X clone Qc-12F7, Qc-11H4 map q28, complete sequence Length = 70580 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 18 ttatttttgcctcccctgttg 38 ||||||||||||||||||||| Sbjct: 39786 ttatttttgcctcccctgttg 39766
>gb|AC011444.5|AC011444 Homo sapiens chromosome 19 clone CTC-232P5, complete sequence Length = 133925 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 285 ctccagcaataaaaggaacaa 305 ||||||||||||||||||||| Sbjct: 38596 ctccagcaataaaaggaacaa 38576
>dbj|BA000028.3| Oceanobacillus iheyensis HTE831 DNA, complete genome Length = 3630528 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 229 ccttgaagaagtatcttcgtgtaat 253 |||||||||||| |||||||||||| Sbjct: 454854 ccttgaagaagtttcttcgtgtaat 454878
>dbj|BA000004.3| Bacillus halodurans C-125 DNA, complete genome Length = 4202352 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 216 ttgagaaaaagtaccttgaagaagt 240 |||||||||||||| |||||||||| Sbjct: 2282715 ttgagaaaaagtacattgaagaagt 2282691
>gb|AC132833.10| Mus musculus chromosome 15, clone RP24-498G7, complete sequence Length = 154206 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 593 gaattagccaacaatctttg 612 |||||||||||||||||||| Sbjct: 8267 gaattagccaacaatctttg 8286
>ref|XM_364870.1| Magnaporthe grisea 70-15 hypothetical protein (MG09715.4) partial mRNA Length = 1026 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 165 agaagattgcaaaggagaaaggtt 188 ||||||||||||||||||| |||| Sbjct: 776 agaagattgcaaaggagaagggtt 799
>gb|AY277790.1| Monocercomonas sp. ATCC 50210 beta-tubulin 1 gene, partial cds Length = 1141 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 403 tgctgatgaagtgttctgca 422 |||||||||||||||||||| Sbjct: 541 tgctgatgaagtgttctgca 560
>gb|AY277780.1| Hypotrichomonas acosta strain ATCC 30069 beta-tubulin 3 gene, partial cds Length = 1141 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 403 tgctgatgaagtgttctgca 422 |||||||||||||||||||| Sbjct: 541 tgctgatgaagtgttctgca 560
>gb|AC122913.4| Mus musculus BAC clone RP23-25J21 from 3, complete sequence Length = 205216 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 318 tcacaaggaaaagtataatt 337 |||||||||||||||||||| Sbjct: 151122 tcacaaggaaaagtataatt 151103
>gb|AC144819.8| Mus musculus BAC clone RP23-162A11 from chromosome 14, complete sequence Length = 198432 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 72 atttgatagttgaagacaag 91 |||||||||||||||||||| Sbjct: 142589 atttgatagttgaagacaag 142608
>emb|AL160270.19| Human DNA sequence from clone RP11-296L22 on chromosome 9 Contains the 5' end of the C9orf25 gene for chromosome 9 open reading frame 25 (FLJ39031), the DNAI1 gene for dynein axonemal intermediate polypeptide 1, the CNTFR gene for ciliary neurotrophic factor receptor, a novel pseudogene, three novel genes, the 3' end of the DCTN3 gene for dynactin (p22) and five CpG islands, complete sequence Length = 199114 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 251 aatatttttgttgtgaaggg 270 |||||||||||||||||||| Sbjct: 10584 aatatttttgttgtgaaggg 10603
>gb|AC158565.2| Mus musculus chromosome 15, clone RP24-354O12, complete sequence Length = 150125 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 593 gaattagccaacaatctttg 612 |||||||||||||||||||| Sbjct: 52007 gaattagccaacaatctttg 51988
>emb|AL021684.1|ATF6H11 Arabidopsis thaliana DNA chromosome 5, BAC clone F6H11 (ESSAII project) Length = 118086 Score = 40.1 bits (20), Expect = 9.0 Identities = 29/32 (90%) Strand = Plus / Minus Query: 116 actggaggtgttaagaccattgggaattatgc 147 |||||||||||||| ||||| || |||||||| Sbjct: 49736 actggaggtgttaaaaccatcggtaattatgc 49705
>gb|AC157504.2| Medicago truncatula chromosome 2 BAC clone mte1-65n19, complete sequence Length = 106635 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 246 cgtgtaatatttttgttgtgaagg 269 |||| ||||||||||||||||||| Sbjct: 73174 cgtggaatatttttgttgtgaagg 73151
>emb|BX831246.1|CNS09ZFV Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS71ZC11 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1398 Score = 40.1 bits (20), Expect = 9.0 Identities = 68/84 (80%) Strand = Plus / Plus Query: 116 actggaggtgttaagaccattgggaattatgcctcggtcttgatggcacagaagattgca 175 ||||||||||| || ||||| || |||||||| | ||||||| ||| ||| |||||| Sbjct: 787 actggaggtgtcaaaaccatcggtaattatgctgcagtcttgaaggctcagtcgattgcg 846 Query: 176 aaggagaaaggttattctgatgtt 199 || | ||||| |||||||||||| Sbjct: 847 aaagctaaagggtattctgatgtt 870 Score = 40.1 bits (20), Expect = 9.0 Identities = 47/56 (83%) Strand = Plus / Plus Query: 2 cctgagtacacattcattatttttgcctcccctgttgggaactactttaaggaagg 57 ||||| ||||| ||| |||| |||| || ||||| ||||||||||| |||||||| Sbjct: 673 cctgaatacactttccttatctttgtttcacctgtcgggaactacttcaaggaagg 728
>dbj|AB010075.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MPA24 Length = 84440 Score = 40.1 bits (20), Expect = 9.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 116 actggaggtgttaagaccattgggaattatgc 147 |||||||||||||| ||||| || |||||||| Sbjct: 70072 actggaggtgttaaaaccatcggtaattatgc 70103
>emb|AL079352.3|CNS00M8V Human chromosome 14 DNA sequence BAC R-388G3 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 176833 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 160 ggcacagaagattgcaaaggagaa 183 ||||||||||||||||||| |||| Sbjct: 72708 ggcacagaagattgcaaagcagaa 72731 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,345,061 Number of Sequences: 3902068 Number of extensions: 6345061 Number of successful extensions: 122415 Number of sequences better than 10.0: 65 Number of HSP's better than 10.0 without gapping: 64 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 121952 Number of HSP's gapped (non-prelim): 450 length of query: 662 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 639 effective length of database: 17,143,297,704 effective search space: 10954567232856 effective search space used: 10954567232856 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
