>emb|X82937.1|HVRNAJIP H.vulgare mRNA for jasmonate induced protein
          Length = 1334

 Score =  398 bits (201), Expect = e-108
 Identities = 447/529 (84%)
 Strand = Plus / Plus

                                                                       
Query: 1   gataaggtgtaccatatccttggcagtgcacaggagatgattatggaggccgaggccgac 60
           ||||||||||| || ||||||| |||||||| ||| |||||     |  ||||||| || 
Sbjct: 225 gataaggtgtatcacatccttgacagtgcacgggacatgatagcacaaaccgaggctgag 284

                                                                       
Query: 61  aaagacgccaccaagcaagatattgctaaggatgtccatgagtactgcaccaaggccatc 120
           || || |||||||||||||||||||  ||||||||| |||| ||||||||||||||||||
Sbjct: 285 aaggatgccaccaagcaagatattggcaaggatgtctatgactactgcaccaaggccatc 344

                                                                       
Query: 121 ggaacatccctcaaattcatccgtagttacaacacccgtctcacctaccttgataaggtc 180
           |||| ||| ||| |||||||||| ||||||||||||||||||||||||||||| ||| ||
Sbjct: 345 ggaatatctctccaattcatccggagttacaacacccgtctcacctaccttgacaagctc 404

                                                                       
Query: 181 aagacccacagtgatgatctcatcaagcagctaaagtgtcttgatccggcaactcaacag 240
           |||||||||||||||||||||||||||||||||||||  ||  |||  || || ||||||
Sbjct: 405 aagacccacagtgatgatctcatcaagcagctaaagttcctcaatctagccacccaacag 464

                                                                       
Query: 241 aaggaagctcaatgccttgctcttgaggctggcaggtataagaaagctgcgcttgaggat 300
           ||||| || ||  ||||||| ||||||||||||| ||||||||||||  |||| ||| ||
Sbjct: 465 aaggaggcccagcgccttgcccttgaggctggcatgtataagaaagccacgctggagaat 524

                                                                       
Query: 301 gccgaaaagtttgaacattttataccaaatcaattctcagaatggctcaagggtaacaaa 360
           ||| |||||||| |||| |||  |||||||||||||||| ||||||||||||  ||||||
Sbjct: 525 gccaaaaagtttcaacactttgcaccaaatcaattctcaaaatggctcaaggaaaacaaa 584

                                                                       
Query: 361 atcaagtttcaggatctggtggcagatgataccgccaagcctggtttgaggggggctttt 420
           |||| |||| ||||||| |||  |||  |||   | |||| |||||| ||||||||||| 
Sbjct: 585 atcatgtttgaggatcttgtgcaagaaaatatgtcaaagcttggttttaggggggctttc 644

                                                                       
Query: 421 aaaaccttggatgatactcaaaagttaaaggcatatgacaatattattgcgggaagtgga 480
           |||| |||||||||||  |||||| || ||| |||||||||||||||||||| |   |||
Sbjct: 645 aaaaacttggatgatatccaaaagctacaggtatatgacaatattattgcggaagcggga 704

                                                            
Query: 481 catggaaaccccatggtgacttactcatttgaagatttgggaaaagtcg 529
           || |||||  |  ||||||||||||||||||||| ||||||||||||||
Sbjct: 705 caaggaaaatctgtggtgacttactcatttgaagctttgggaaaagtcg 753



 Score =  105 bits (53), Expect = 2e-19
 Identities = 92/105 (87%)
 Strand = Plus / Plus

                                                                        
Query: 537  cagtggaactagcaaggtgaatataacagacgggcttagtggttgtcgtgtggctcctat 596
            ||||||||||||||||||||| ||||||||||||||||  | ||| |||||||| |||||
Sbjct: 1034 cagtggaactagcaaggtgaagataacagacgggcttacagtttgccgtgtggcgcctat 1093

                                                         
Query: 597  gactgatggtctccaactcgctcgccttgttacgcacaactaccc 641
            | || |||||||| |||||||||| || |||| |||||| |||||
Sbjct: 1094 gcctcatggtctcgaactcgctcgtctagttaagcacaattaccc 1138

>emb|AL121999.18|HSJ543J13 Human DNA sequence from clone RP4-543J13 on chromosome 1p13.1-13.3
             Contains a novel gene, complete sequence
          Length = 137490

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 407   tgaggggggcttttaaaaccttggat 432
             ||||||||||||||||| ||||||||
Sbjct: 80417 tgaggggggcttttaaagccttggat 80442

>emb|AL928617.13| Mouse DNA sequence from clone RP23-326E21 on chromosome 2, complete
              sequence
          Length = 190652

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 230    caactcaacagaaggaagctca 251
              ||||||||||||||||||||||
Sbjct: 133392 caactcaacagaaggaagctca 133371

>gb|AC137108.12| Mus musculus chromosome 9, clone RP23-277J20, complete sequence
          Length = 204108

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 229    gcaactcaacagaaggaagct 249
              |||||||||||||||||||||
Sbjct: 195846 gcaactcaacagaaggaagct 195826

>gb|AC123852.4| Mus musculus BAC clone RP23-326G23 from chromosome 6, complete sequence
          Length = 195925

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 310   tttgaacattttataccaaat 330
             |||||||||||||||||||||
Sbjct: 29199 tttgaacattttataccaaat 29219

>gb|AC157950.2| Mus musculus BAC clone RP23-128A23 from chromosome 9, complete
            sequence
          Length = 202301

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 229  gcaactcaacagaaggaagct 249
            |||||||||||||||||||||
Sbjct: 1394 gcaactcaacagaaggaagct 1374

>gb|AC092855.39| Mus musculus strain C57BL/6J chromosome 3 clone rp23-49o17, complete
              sequence
          Length = 249205

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 255    ccttgctcttgaggctggcag 275
              |||||||||||||||||||||
Sbjct: 205409 ccttgctcttgaggctggcag 205389

>emb|AL627257.9| Mouse DNA sequence from clone RP23-3L4 on chromosome 4, complete sequence
          Length = 241053

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 204    caagcagctaaagtgtcttga 224
              |||||||||||||||||||||
Sbjct: 232246 caagcagctaaagtgtcttga 232266

>emb|AL645471.8| Mouse DNA sequence from clone RP23-456M3 on chromosome 11, complete
             sequence
          Length = 178361

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 673   ctactctactactgctgctat 693
             |||||||||||||||||||||
Sbjct: 18586 ctactctactactgctgctat 18566

>emb|AL670175.12| Mouse DNA sequence from clone RP23-309K20 on chromosome 4, complete
             sequence
          Length = 168158

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 204   caagcagctaaagtgtcttga 224
             |||||||||||||||||||||
Sbjct: 14571 caagcagctaaagtgtcttga 14591

>gb|CP000112.1| Desulfovibrio desulfuricans G20, complete genome
          Length = 3730232

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 48      ggccgaggccgacaaagacg 67
               ||||||||||||||||||||
Sbjct: 2313856 ggccgaggccgacaaagacg 2313875

>ref|XM_479497.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2035

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 603 tggtctccaactcgctcgcc 622
           ||||||||||||||||||||
Sbjct: 712 tggtctccaactcgctcgcc 731

>ref|XM_513270.1| PREDICTED: Pan troglodytes similar to alpha 1 type XVI collagen
            precursor; collagen XVI, alpha-1 polypeptide (LOC456702),
            mRNA
          Length = 4389

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 396  caagcctggtttgagggggg 415
            ||||||||||||||||||||
Sbjct: 3144 caagcctggtttgagggggg 3163

>ref|XM_875562.1| PREDICTED: Bos taurus similar to ATP-binding cassette, sub-family A,
            member 9 isoform a, transcript variant 5 (LOC504278),
            mRNA
          Length = 3523

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 82   attgctaaggatgtccatgagtac 105
            |||||||| |||||||||||||||
Sbjct: 3165 attgctaatgatgtccatgagtac 3142

>ref|XM_865176.1| PREDICTED: Bos taurus similar to ATP-binding cassette, sub-family A,
            member 9 isoform a, transcript variant 3 (LOC504278),
            mRNA
          Length = 4685

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 82   attgctaaggatgtccatgagtac 105
            |||||||| |||||||||||||||
Sbjct: 3165 attgctaatgatgtccatgagtac 3142

>emb|Z81581.1|CET02E1 Caenorhabditis elegans Cosmid T02E1, complete sequence
          Length = 33520

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 304   gaaaagtttgaacattttat 323
             ||||||||||||||||||||
Sbjct: 22854 gaaaagtttgaacattttat 22873

>emb|AL354794.16| Human DNA sequence from clone RP11-203L2 on chromosome 9q21.11-21.2
              Contains the 5' end of the PIP5K1B gene for
              phosphatidylinositol-4-phosphate 5-kinase, type I, beta
              (MSS4, STM7), a novel gene (MGC17374), a adaptor-related
              protein complex 3, mu 2 subunit (P47B, AP47B, CLA20)
              (AP3M2) pseudogene, the 3' end of a novel gene and 2 CpG
              islands, complete sequence
          Length = 154071

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 329    atcaattctcagaatggctc 348
              ||||||||||||||||||||
Sbjct: 124931 atcaattctcagaatggctc 124912

>emb|AL354694.18| Human DNA sequence from clone RP11-77E14 on chromosome 9 Contains a novel
              gene, complete sequence
          Length = 153324

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 394    gccaagcctggtttgagggg 413
              ||||||||||||||||||||
Sbjct: 113436 gccaagcctggtttgagggg 113455

>emb|AL031782.1|HS708F5 Human DNA sequence from clone RP4-708F5 on chromosome 6p11.2-12.3
             Contains part of the COL21A1 gene for collagen, type XXI,
             alpha 1 (collagen XXI, collagen, type XX, alpha 1, COLA1L,
             COL20A1, DKFZp564B052), complete sequence
          Length = 126501

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 648   atgaactgattatcccagaa 667
             ||||||||||||||||||||
Sbjct: 93152 atgaactgattatcccagaa 93133

>emb|Z47746.1|SC8557 S.cerevisiae chromosome IV cosmid 8557
          Length = 36217

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 65    acgccaccaagcaagatatt 84
             ||||||||||||||||||||
Sbjct: 13736 acgccaccaagcaagatatt 13717

>emb|AJ508355.1|BMA508355 Brugia malayi ORF1, ORF2, ORF3 and ORF4 DNA and alt-1 gene
          Length = 32442

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 303   cgaaaagtttgaacatttta 322
             ||||||||||||||||||||
Sbjct: 22043 cgaaaagtttgaacatttta 22062

>gb|AC121541.31| Mus musculus chromosome 5, clone RP24-132B11, complete sequence
          Length = 171770

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 123  aacatccctcaaattcatcc 142
            ||||||||||||||||||||
Sbjct: 5340 aacatccctcaaattcatcc 5321

>gb|AF438327.1| Homo sapiens alpha 1 type XXI collagen precursor (COL21A1) gene, complete
              cds, alternatively spliced
          Length = 381696

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 648    atgaactgattatcccagaa 667
              ||||||||||||||||||||
Sbjct: 184155 atgaactgattatcccagaa 184174

>gb|AC091614.3| Homo sapiens chromosome 1 clone RP4-665J23, complete sequence
          Length = 107764

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 224   atccggcaactcaacagaag 243
             ||||||||||||||||||||
Sbjct: 16106 atccggcaactcaacagaag 16125

>ref|NM_001026692.2| Caenorhabditis elegans human KRIT 1 (Krev interaction
            trapped/cerebral cavernous malformation 1) homolog family
            member (kri-1) (kri-1) mRNA, complete cds
          Length = 2227

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 304  gaaaagtttgaacattttat 323
            ||||||||||||||||||||
Sbjct: 2214 gaaaagtttgaacattttat 2195

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 603      tggtctccaactcgctcgcc 622
                ||||||||||||||||||||
Sbjct: 28508669 tggtctccaactcgctcgcc 28508650

>gb|AC068790.36| Homo sapiens 12 BAC RP11-214K3 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 198537

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 172   gataaggtcaagacccacag 191
             ||||||||||||||||||||
Sbjct: 74548 gataaggtcaagacccacag 74567

>gb|AC007278.4| Homo sapiens BAC clone RP11-308G20 from 2, complete sequence
          Length = 162508

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 648   atgaactgattatcccagaatgct 671
             |||||||| |||||||||||||||
Sbjct: 37444 atgaactgcttatcccagaatgct 37421

>gb|AC005037.2| Homo sapiens BAC clone RP11-469M7 from 2, complete sequence
          Length = 190508

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 373    gatctggtggcagatgatac 392
              ||||||||||||||||||||
Sbjct: 169578 gatctggtggcagatgatac 169597

>dbj|AP006268.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0037D09
          Length = 140470

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 603   tggtctccaactcgctcgcc 622
             ||||||||||||||||||||
Sbjct: 74421 tggtctccaactcgctcgcc 74402

>dbj|AP004343.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0618H09
          Length = 142306

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 603   tggtctccaactcgctcgcc 622
             ||||||||||||||||||||
Sbjct: 66210 tggtctccaactcgctcgcc 66191

>gb|AC144691.3| Didelphis virginiana clone LB3-241H11, complete sequence
          Length = 158347

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 673   ctactctactactgctgcta 692
             ||||||||||||||||||||
Sbjct: 27425 ctactctactactgctgcta 27406

>dbj|AK101251.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033032F02, full
           insert sequence
          Length = 2035

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 603 tggtctccaactcgctcgcc 622
           ||||||||||||||||||||
Sbjct: 712 tggtctccaactcgctcgcc 731

>emb|CT027681.7| Mouse DNA sequence from clone RP24-330H24 on chromosome 16, complete
             sequence
          Length = 190475

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 75    gcaagatattgctaaggatg 94
             ||||||||||||||||||||
Sbjct: 78506 gcaagatattgctaaggatg 78525

>gb|DP000023.1| Didelphis virginiana target 1 genomic scaffold
          Length = 1751794

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 673     ctactctactactgctgcta 692
               ||||||||||||||||||||
Sbjct: 1251569 ctactctactactgctgcta 1251550


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,298,759
Number of Sequences: 3902068
Number of extensions: 6298759
Number of successful extensions: 114828
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 114687
Number of HSP's gapped (non-prelim): 139
length of query: 695
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 672
effective length of database: 17,143,297,704
effective search space: 11520296057088
effective search space used: 11520296057088
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)