ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags18c17 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_473432.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1638 Score = 737 bits (372), Expect = 0.0 Identities = 594/668 (88%) Strand = Plus / Plus Query: 2 attttgaaagctcatggtaaaagtgccaaggaaagttacctgctgaatggttatgcgctg 61 ||||||||||| |||||||||||||||||||| ||||||||||||||||| ||||| || Sbjct: 598 attttgaaagcccatggtaaaagtgccaaggacagttacctgctgaatgggtatgcacta 657 Query: 62 aacactggccgtgctgctcaaggaatgcctaccagagtaacccctgctagaattgcttgt 121 ||||| |||||||| ||||||||||||||||| ||||||||||| || |||||||| ||| Sbjct: 658 aacacaggccgtgcagctcaaggaatgcctactagagtaaccccggcaagaattgcatgt 717 Query: 122 cttgatttcaaccttcagaagacgaaaatgcaaatgggtgttcaagtccttgtatctgat 181 |||||||| |||||||||||||| ||||||||| |||||||||||||||||||| ||||| Sbjct: 718 cttgattttaaccttcagaagacaaaaatgcaattgggtgttcaagtccttgtaactgat 777 Query: 182 ccaagggaactggagaagatccgtgagagggaatctgacataacaaaggagcgaattgag 241 ||||||||||| ||||| || ||| |||| |||||||||||||||||||||||||||||| Sbjct: 778 ccaagggaacttgagaaaattcgtcagagagaatctgacataacaaaggagcgaattgag 837 Query: 242 aaagttctcaaggctggtgctaatgttgtatttaccaccaagggaattgatgatatgtca 301 ||| |||| ||||||||||||||||||||| | ||||| ||||||||||||||||||||| Sbjct: 838 aaaattctgaaggctggtgctaatgttgtactgaccactaagggaattgatgatatgtca 897 Query: 302 ttgaagtactttgttgaggctggagcaattgcagtaagacgtgtgcgtaaggaggatttg 361 |||||||||| |||||||||||||||||||| ||||| ||||||||||||||||||||| Sbjct: 898 ctgaagtacttcgttgaggctggagcaattgctgtaaggcgtgtgcgtaaggaggatttg 957 Query: 362 cgccatgttgccaaggcaacaggtgcgacaatggtgactacttttgctgacatggagggt 421 ||||||||||||||||| || ||||| || ||||| |||| |||||||| ||||| ||| Sbjct: 958 cgccatgttgccaaggctactggtgcaactatggtatctacatttgctgatatggaaggt 1017 Query: 422 gaagaaacatttgatccttcctttcttggacatgccgacgaggtcgttgaggaaaggatt 481 ||||| ||||| ||| | || || ||||||||||| || || || ||||||||||| ||| Sbjct: 1018 gaagagacattcgattcatcgttccttggacatgctgatgaagttgttgaggaaagaatt 1077 Query: 482 tctgatgatgaaataattctagtgaaaggcacaaagaacacaagtgcggtttccattata 541 |||||||||| ||||| | |||||||| ||||||||||| || || || || |||||| Sbjct: 1078 gctgatgatgatgtaattttggtgaaaggaacaaagaacaccagcgctgtctcaattata 1137 Query: 542 ctcagaggagcaaatgacttcatgctagacgagattgaacggtctttgcacgatgcactg 601 || ||||| |||||||||||||||||||| |||||||| | || ||||| |||||| || Sbjct: 1138 cttagaggcgcaaatgacttcatgctagatgagattgacagatcattgcatgatgcattg 1197 Query: 602 tgcattgtgaagagaactttggaatccaatacggtagttgctggtggtggtgctgtagaa 661 |||||||||||||||||| |||||||||||| ||| ||||||||||||||||| || ||| Sbjct: 1198 tgcattgtgaagagaactctggaatccaatatggttgttgctggtggtggtgcagttgaa 1257 Query: 662 gctgcatt 669 |||||||| Sbjct: 1258 gctgcatt 1265
>dbj|AK121568.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033035C24, full insert sequence Length = 2015 Score = 737 bits (372), Expect = 0.0 Identities = 594/668 (88%) Strand = Plus / Plus Query: 2 attttgaaagctcatggtaaaagtgccaaggaaagttacctgctgaatggttatgcgctg 61 ||||||||||| |||||||||||||||||||| ||||||||||||||||| ||||| || Sbjct: 695 attttgaaagcccatggtaaaagtgccaaggacagttacctgctgaatgggtatgcacta 754 Query: 62 aacactggccgtgctgctcaaggaatgcctaccagagtaacccctgctagaattgcttgt 121 ||||| |||||||| ||||||||||||||||| ||||||||||| || |||||||| ||| Sbjct: 755 aacacaggccgtgcagctcaaggaatgcctactagagtaaccccggcaagaattgcatgt 814 Query: 122 cttgatttcaaccttcagaagacgaaaatgcaaatgggtgttcaagtccttgtatctgat 181 |||||||| |||||||||||||| ||||||||| |||||||||||||||||||| ||||| Sbjct: 815 cttgattttaaccttcagaagacaaaaatgcaattgggtgttcaagtccttgtaactgat 874 Query: 182 ccaagggaactggagaagatccgtgagagggaatctgacataacaaaggagcgaattgag 241 ||||||||||| ||||| || ||| |||| |||||||||||||||||||||||||||||| Sbjct: 875 ccaagggaacttgagaaaattcgtcagagagaatctgacataacaaaggagcgaattgag 934 Query: 242 aaagttctcaaggctggtgctaatgttgtatttaccaccaagggaattgatgatatgtca 301 ||| |||| ||||||||||||||||||||| | ||||| ||||||||||||||||||||| Sbjct: 935 aaaattctgaaggctggtgctaatgttgtactgaccactaagggaattgatgatatgtca 994 Query: 302 ttgaagtactttgttgaggctggagcaattgcagtaagacgtgtgcgtaaggaggatttg 361 |||||||||| |||||||||||||||||||| ||||| ||||||||||||||||||||| Sbjct: 995 ctgaagtacttcgttgaggctggagcaattgctgtaaggcgtgtgcgtaaggaggatttg 1054 Query: 362 cgccatgttgccaaggcaacaggtgcgacaatggtgactacttttgctgacatggagggt 421 ||||||||||||||||| || ||||| || ||||| |||| |||||||| ||||| ||| Sbjct: 1055 cgccatgttgccaaggctactggtgcaactatggtatctacatttgctgatatggaaggt 1114 Query: 422 gaagaaacatttgatccttcctttcttggacatgccgacgaggtcgttgaggaaaggatt 481 ||||| ||||| ||| | || || ||||||||||| || || || ||||||||||| ||| Sbjct: 1115 gaagagacattcgattcatcgttccttggacatgctgatgaagttgttgaggaaagaatt 1174 Query: 482 tctgatgatgaaataattctagtgaaaggcacaaagaacacaagtgcggtttccattata 541 |||||||||| ||||| | |||||||| ||||||||||| || || || || |||||| Sbjct: 1175 gctgatgatgatgtaattttggtgaaaggaacaaagaacaccagcgctgtctcaattata 1234 Query: 542 ctcagaggagcaaatgacttcatgctagacgagattgaacggtctttgcacgatgcactg 601 || ||||| |||||||||||||||||||| |||||||| | || ||||| |||||| || Sbjct: 1235 cttagaggcgcaaatgacttcatgctagatgagattgacagatcattgcatgatgcattg 1294 Query: 602 tgcattgtgaagagaactttggaatccaatacggtagttgctggtggtggtgctgtagaa 661 |||||||||||||||||| |||||||||||| ||| ||||||||||||||||| || ||| Sbjct: 1295 tgcattgtgaagagaactctggaatccaatatggttgttgctggtggtggtgcagttgaa 1354 Query: 662 gctgcatt 669 |||||||| Sbjct: 1355 gctgcatt 1362
>gb|AY104154.1| Zea mays PCO140702 mRNA sequence Length = 2014 Score = 676 bits (341), Expect = 0.0 Identities = 584/665 (87%) Strand = Plus / Plus Query: 2 attttgaaagctcatggtaaaagtgccaaggaaagttacctgctgaatggttatgcgctg 61 ||||||||||||||||||||||| |||||||| ||||||||| ||||||| ||||| || Sbjct: 712 attttgaaagctcatggtaaaagcgccaaggatagttacctgttgaatggctatgcacta 771 Query: 62 aacactggccgtgctgctcaaggaatgcctaccagagtaacccctgctagaattgcttgt 121 ||||| |||||||| ||||||||||||||||| |||||||| |||||||||||||||||| Sbjct: 772 aacacaggccgtgcagctcaaggaatgcctacgagagtaactcctgctagaattgcttgt 831 Query: 122 cttgatttcaaccttcagaagacgaaaatgcaaatgggtgttcaagtccttgtatctgat 181 |||||||| |||||||||||||| ||||||||| | ||||| ||||| |||||| ||||| Sbjct: 832 cttgattttaaccttcagaagacaaaaatgcaacttggtgtccaagttcttgtaactgat 891 Query: 182 ccaagggaactggagaagatccgtgagagggaatctgacataacaaaggagcgaattgag 241 ||||| ||||| |||||||| ||| |||| ||||||||||||||||||||||| || || Sbjct: 892 ccaagagaacttgagaagattcgtcagagagaatctgacataacaaaggagcggatcgat 951 Query: 242 aaagttctcaaggctggtgctaatgttgtatttaccaccaagggaattgatgatatgtca 301 ||| ||||||||||||| ||||||||||| || ||||| |||||||||||||||||||| Sbjct: 952 aaaattctcaaggctggagctaatgttgtgttgaccactaagggaattgatgatatgtcc 1011 Query: 302 ttgaagtactttgttgaggctggagcaattgcagtaagacgtgtgcgtaaggaggatttg 361 |||||||||||||||||||||||||| ||||||||||| |||||||| ||||| |||||| Sbjct: 1012 ttgaagtactttgttgaggctggagctattgcagtaaggcgtgtgcgcaaggaagatttg 1071 Query: 362 cgccatgttgccaaggcaacaggtgcgacaatggtgactacttttgctgacatggagggt 421 |||||||||||||| || || ||||| || ||||||| ||| ||||| |||||||| ||| Sbjct: 1072 cgccatgttgccaaagccactggtgcaactatggtgagtacatttgcagacatggaaggt 1131 Query: 422 gaagaaacatttgatccttcctttcttggacatgccgacgaggtcgttgaggaaaggatt 481 ||||||||||||||| | || || ||||||||||| || || || || |||||||| ||| Sbjct: 1132 gaagaaacatttgattcatcattccttggacatgctgatgaagttgtggaggaaagaatt 1191 Query: 482 tctgatgatgaaataattctagtgaaaggcacaaagaacacaagtgcggtttccattata 541 |||||||||| | ||||| |||||||||||||||||||| || ||||| || || ||| Sbjct: 1192 gctgatgatgatgttattctggtgaaaggcacaaagaacaccagcgcggtctctataata 1251 Query: 542 ctcagaggagcaaatgacttcatgctagacgagattgaacggtctttgcacgatgcactg 601 || || || |||||||||| |||||| || |||||||||||||| ||||| ||||| ||| Sbjct: 1252 cttaggggcgcaaatgactacatgcttgatgagattgaacggtccttgcatgatgccctg 1311 Query: 602 tgcattgtgaagagaactttggaatccaatacggtagttgctggtggtggtgctgtagaa 661 ||||||||||||||||| ||||||| |||| ||| |||||||| |||||||| || ||| Sbjct: 1312 tgcattgtgaagagaaccctggaatcaaatatggttgttgctgggggtggtgcagttgaa 1371 Query: 662 gctgc 666 ||||| Sbjct: 1372 gctgc 1376
>emb|AL606633.3|OSJN00060 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0010H02, complete sequence Length = 173522 Score = 266 bits (134), Expect = 9e-68 Identities = 191/210 (90%) Strand = Plus / Plus Query: 2 attttgaaagctcatggtaaaagtgccaaggaaagttacctgctgaatggttatgcgctg 61 ||||||||||| |||||||||||||||||||| ||||||||||||||||| ||||| || Sbjct: 44285 attttgaaagcccatggtaaaagtgccaaggacagttacctgctgaatgggtatgcacta 44344 Query: 62 aacactggccgtgctgctcaaggaatgcctaccagagtaacccctgctagaattgcttgt 121 ||||| |||||||| ||||||||||||||||| ||||||||||| || |||||||| ||| Sbjct: 44345 aacacaggccgtgcagctcaaggaatgcctactagagtaaccccggcaagaattgcatgt 44404 Query: 122 cttgatttcaaccttcagaagacgaaaatgcaaatgggtgttcaagtccttgtatctgat 181 |||||||| |||||||||||||| ||||||||| |||||||||||||||||||| ||||| Sbjct: 44405 cttgattttaaccttcagaagacaaaaatgcaattgggtgttcaagtccttgtaactgat 44464 Query: 182 ccaagggaactggagaagatccgtgagagg 211 ||||||||||| ||||| || ||| ||||| Sbjct: 44465 ccaagggaacttgagaaaattcgtcagagg 44494 Score = 143 bits (72), Expect = 9e-31 Identities = 90/96 (93%) Strand = Plus / Plus Query: 212 gaatctgacataacaaaggagcgaattgagaaagttctcaaggctggtgctaatgttgta 271 ||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| Sbjct: 44723 gaatctgacataacaaaggagcgaattgagaaaattctgaaggctggtgctaatgttgta 44782 Query: 272 tttaccaccaagggaattgatgatatgtcattgaag 307 | ||||| ||||||||||||||||||||| ||||| Sbjct: 44783 ctgaccactaagggaattgatgatatgtcactgaag 44818 Score = 125 bits (63), Expect = 2e-25 Identities = 84/91 (92%) Strand = Plus / Plus Query: 306 agtactttgttgaggctggagcaattgcagtaagacgtgtgcgtaaggaggatttgcgcc 365 ||||||| |||||||||||||||||||| ||||| ||||||||||||||||||||||||| Sbjct: 45232 agtacttcgttgaggctggagcaattgctgtaaggcgtgtgcgtaaggaggatttgcgcc 45291 Query: 366 atgttgccaaggcaacaggtgcgacaatggt 396 ||||||||||||| || ||||| || ||||| Sbjct: 45292 atgttgccaaggctactggtgcaactatggt 45322 Score = 115 bits (58), Expect = 2e-22 Identities = 91/102 (89%) Strand = Plus / Plus Query: 536 attatactcagaggagcaaatgacttcatgctagacgagattgaacggtctttgcacgat 595 |||||||| ||||| |||||||||||||||||||| |||||||| | || ||||| ||| Sbjct: 45756 attatacttagaggcgcaaatgacttcatgctagatgagattgacagatcattgcatgat 45815 Query: 596 gcactgtgcattgtgaagagaactttggaatccaatacggta 637 ||| |||||||||||||||||||| |||||||||||| |||| Sbjct: 45816 gcattgtgcattgtgaagagaactctggaatccaatatggta 45857 Score = 87.7 bits (44), Expect = 4e-14 Identities = 104/124 (83%) Strand = Plus / Plus Query: 399 ctacttttgctgacatggagggtgaagaaacatttgatccttcctttcttggacatgccg 458 |||| |||||||| ||||| |||||||| ||||| ||| | || || ||||||||||| | Sbjct: 45525 ctacatttgctgatatggaaggtgaagagacattcgattcatcgttccttggacatgctg 45584 Query: 459 acgaggtcgttgaggaaaggatttctgatgatgaaataattctagtgaaaggcacaaaga 518 | || || ||||||||||| ||| |||||||||| ||||| | |||||||| ||||||| Sbjct: 45585 atgaagttgttgaggaaagaattgctgatgatgatgtaattttggtgaaaggaacaaaga 45644 Query: 519 acac 522 |||| Sbjct: 45645 acac 45648 Score = 48.1 bits (24), Expect = 0.038 Identities = 30/32 (93%) Strand = Plus / Plus Query: 638 gttgctggtggtggtgctgtagaagctgcatt 669 ||||||||||||||||| || ||||||||||| Sbjct: 46349 gttgctggtggtggtgcagttgaagctgcatt 46380
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 266 bits (134), Expect = 9e-68 Identities = 191/210 (90%) Strand = Plus / Plus Query: 2 attttgaaagctcatggtaaaagtgccaaggaaagttacctgctgaatggttatgcgctg 61 ||||||||||| |||||||||||||||||||| ||||||||||||||||| ||||| || Sbjct: 27613656 attttgaaagcccatggtaaaagtgccaaggacagttacctgctgaatgggtatgcacta 27613715 Query: 62 aacactggccgtgctgctcaaggaatgcctaccagagtaacccctgctagaattgcttgt 121 ||||| |||||||| ||||||||||||||||| ||||||||||| || |||||||| ||| Sbjct: 27613716 aacacaggccgtgcagctcaaggaatgcctactagagtaaccccggcaagaattgcatgt 27613775 Query: 122 cttgatttcaaccttcagaagacgaaaatgcaaatgggtgttcaagtccttgtatctgat 181 |||||||| |||||||||||||| ||||||||| |||||||||||||||||||| ||||| Sbjct: 27613776 cttgattttaaccttcagaagacaaaaatgcaattgggtgttcaagtccttgtaactgat 27613835 Query: 182 ccaagggaactggagaagatccgtgagagg 211 ||||||||||| ||||| || ||| ||||| Sbjct: 27613836 ccaagggaacttgagaaaattcgtcagagg 27613865 Score = 143 bits (72), Expect = 9e-31 Identities = 90/96 (93%) Strand = Plus / Plus Query: 212 gaatctgacataacaaaggagcgaattgagaaagttctcaaggctggtgctaatgttgta 271 ||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| Sbjct: 27614094 gaatctgacataacaaaggagcgaattgagaaaattctgaaggctggtgctaatgttgta 27614153 Query: 272 tttaccaccaagggaattgatgatatgtcattgaag 307 | ||||| ||||||||||||||||||||| ||||| Sbjct: 27614154 ctgaccactaagggaattgatgatatgtcactgaag 27614189 Score = 125 bits (63), Expect = 2e-25 Identities = 84/91 (92%) Strand = Plus / Plus Query: 306 agtactttgttgaggctggagcaattgcagtaagacgtgtgcgtaaggaggatttgcgcc 365 ||||||| |||||||||||||||||||| ||||| ||||||||||||||||||||||||| Sbjct: 27614603 agtacttcgttgaggctggagcaattgctgtaaggcgtgtgcgtaaggaggatttgcgcc 27614662 Query: 366 atgttgccaaggcaacaggtgcgacaatggt 396 ||||||||||||| || ||||| || ||||| Sbjct: 27614663 atgttgccaaggctactggtgcaactatggt 27614693 Score = 115 bits (58), Expect = 2e-22 Identities = 91/102 (89%) Strand = Plus / Plus Query: 536 attatactcagaggagcaaatgacttcatgctagacgagattgaacggtctttgcacgat 595 |||||||| ||||| |||||||||||||||||||| |||||||| | || ||||| ||| Sbjct: 27615127 attatacttagaggcgcaaatgacttcatgctagatgagattgacagatcattgcatgat 27615186 Query: 596 gcactgtgcattgtgaagagaactttggaatccaatacggta 637 ||| |||||||||||||||||||| |||||||||||| |||| Sbjct: 27615187 gcattgtgcattgtgaagagaactctggaatccaatatggta 27615228 Score = 87.7 bits (44), Expect = 4e-14 Identities = 104/124 (83%) Strand = Plus / Plus Query: 399 ctacttttgctgacatggagggtgaagaaacatttgatccttcctttcttggacatgccg 458 |||| |||||||| ||||| |||||||| ||||| ||| | || || ||||||||||| | Sbjct: 27614896 ctacatttgctgatatggaaggtgaagagacattcgattcatcgttccttggacatgctg 27614955 Query: 459 acgaggtcgttgaggaaaggatttctgatgatgaaataattctagtgaaaggcacaaaga 518 | || || ||||||||||| ||| |||||||||| ||||| | |||||||| ||||||| Sbjct: 27614956 atgaagttgttgaggaaagaattgctgatgatgatgtaattttggtgaaaggaacaaaga 27615015 Query: 519 acac 522 |||| Sbjct: 27615016 acac 27615019 Score = 48.1 bits (24), Expect = 0.038 Identities = 30/32 (93%) Strand = Plus / Plus Query: 638 gttgctggtggtggtgctgtagaagctgcatt 669 ||||||||||||||||| || ||||||||||| Sbjct: 27615720 gttgctggtggtggtgcagttgaagctgcatt 27615751
>dbj|AB073552.1| Bruguiera sexangula bstcp-1 mRNA for t-complex polypeptide 1, complete cds Length = 2060 Score = 204 bits (103), Expect = 3e-49 Identities = 352/435 (80%) Strand = Plus / Plus Query: 2 attttgaaagctcatggtaaaagtgccaaggaaagttacctgctgaatggttatgcgctg 61 ||||||||||||||||| |||||||| | || || | ||| ||||||| ||||| || Sbjct: 678 attttgaaagctcatggaaaaagtgcaagagatagctgccttttgaatggctatgctctc 737 Query: 62 aacactggccgtgctgctcaaggaatgcctaccagagtaacccctgctagaattgcttgt 121 || ||||| |||||||||||||| ||||||| ||||| | ||||| || ||||||||| Sbjct: 738 aatactggtcgtgctgctcaagggatgcctatgagagttgcacctgcaaggattgcttgt 797 Query: 122 cttgatttcaaccttcagaagacgaaaatgcaaatgggtgttcaagtccttgtatctgat 181 ||||| || || |||||||| ||||| |||||| ||||||| |||||| | || ||||| Sbjct: 798 cttgactttaatcttcagaaaacgaagatgcaattgggtgtacaagtcttagtcactgat 857 Query: 182 ccaagggaactggagaagatccgtgagagggaatctgacataacaaaggagcgaattgag 241 || ||||| || || | || ||| | || ||| |||| || |||||||| || |||||| Sbjct: 858 cccagggagcttgaaagaattcgtcaaagagaagctgatatgacaaaggaacggattgag 917 Query: 242 aaagttctcaaggctggtgctaatgttgtatttaccaccaagggaattgatgatatgtca 301 ||| | || || ||||| || |||||||| | ||||| |||||||||||||| ||| || Sbjct: 918 aaactcctgaaagctggagcaaatgttgttctaaccacaaagggaattgatgacatggca 977 Query: 302 ttgaagtactttgttgaggctggagcaattgcagtaagacgtgtgcgtaaggaggatttg 361 | || || ||||| |||||||| || ||||| || |||||||| || || |||||| || Sbjct: 978 cttaaatattttgtggaggctggggctattgctgtgagacgtgttcggaaagaggatatg 1037 Query: 362 cgccatgttgccaaggcaacaggtgcgacaatggtgactacttttgctgacatggagggt 421 |||||||||||||||||||| ||||| ||| |||| | || |||||||||||||| || Sbjct: 1038 cgccatgttgccaaggcaactggtgcaacactggtttcaacatttgctgacatggaagga 1097 Query: 422 gaagaaacatttgat 436 || |||||||||||| Sbjct: 1098 gaggaaacatttgat 1112
>gb|BT002052.1| Arabidopsis thaliana t-complex polypeptide 1 homologue (At3g20050) mRNA, complete cds Length = 2022 Score = 163 bits (82), Expect = 9e-37 Identities = 265/326 (81%) Strand = Plus / Plus Query: 113 attgcttgtcttgatttcaaccttcagaagacgaaaatgcaaatgggtgttcaagtcctt 172 |||||||| ||||| ||||| || |||||||| |||||||| ||||||| ||||| || Sbjct: 842 attgcttgccttgacttcaatctgcagaagacaaaaatgcagctgggtgtccaagttgtt 901 Query: 173 gtatctgatccaagggaactggagaagatccgtgagagggaatctgacataacaaaggag 232 || ||| ||| | ||||| || ||||||||| | || ||| ||||||| ||||| ||| Sbjct: 902 gttaatgacccacgagaacttgaaaagatccgtcaaagagaagctgacatgacaaaagag 961 Query: 233 cgaattgagaaagttctcaaggctggtgctaatgttgtatttaccaccaagggaattgat 292 || || |||||| ||||||| ||||| || ||||| || | ||||| ||||| ||||| Sbjct: 962 cggatagagaaacttctcaaagctggggccaatgtagttctgaccacaaaggggattgac 1021 Query: 293 gatatgtcattgaagtactttgttgaggctggagcaattgcagtaagacgtgtgcgtaag 352 || ||| || | || |||||||| ||||| ||||| ||||| || || |||||||| || Sbjct: 1022 gacatggcacttaaatactttgtagaggcaggagctattgctgttaggcgtgtgcgcaaa 1081 Query: 353 gaggatttgcgccatgttgccaaggcaacaggtgcgacaatggtgactacttttgctgac 412 || || |||| |||||||||||||| ||||| ||||| |||| || |||||||||||| Sbjct: 1082 gaagacatgcgtcatgttgccaaggcgacaggagcgactctggtcaccacttttgctgac 1141 Query: 413 atggagggtgaagaaacatttgatcc 438 |||||||| ||||||||||||||||| Sbjct: 1142 atggagggcgaagaaacatttgatcc 1167
>ref|NM_112896.2| Arabidopsis thaliana ATTCP-1; ATP binding / protein binding AT3G20050 (ATTCP-1) mRNA, complete cds Length = 2063 Score = 155 bits (78), Expect = 2e-34 Identities = 264/326 (80%) Strand = Plus / Plus Query: 113 attgcttgtcttgatttcaaccttcagaagacgaaaatgcaaatgggtgttcaagtcctt 172 |||||||| ||||| ||||| || |||||||| |||||||| ||||||| ||||| || Sbjct: 844 attgcttgccttgacttcaatctgcagaagacaaaaatgcagctgggtgtccaagttgtt 903 Query: 173 gtatctgatccaagggaactggagaagatccgtgagagggaatctgacataacaaaggag 232 || ||| ||| | ||||| || ||||||||| | || ||| ||||||| ||||| ||| Sbjct: 904 gttaatgacccacgagaacttgaaaagatccgtcaaagagaagctgacatgacaaaagag 963 Query: 233 cgaattgagaaagttctcaaggctggtgctaatgttgtatttaccaccaagggaattgat 292 || || |||||| ||||||| ||||| || ||||| | | ||||| ||||| ||||| Sbjct: 964 cggatagagaaacttctcaaagctggggccaatgtaattctgaccacaaaggggattgac 1023 Query: 293 gatatgtcattgaagtactttgttgaggctggagcaattgcagtaagacgtgtgcgtaag 352 || ||| || | || |||||||| ||||| ||||| ||||| || || |||||||| || Sbjct: 1024 gacatggcacttaaatactttgtagaggcaggagctattgctgttaggcgtgtgcgcaaa 1083 Query: 353 gaggatttgcgccatgttgccaaggcaacaggtgcgacaatggtgactacttttgctgac 412 || || |||| |||||||||||||| ||||| ||||| |||| || |||||||||||| Sbjct: 1084 gaagacatgcgtcatgttgccaaggcgacaggagcgactctggtcaccacttttgctgac 1143 Query: 413 atggagggtgaagaaacatttgatcc 438 |||||||| ||||||||||||||||| Sbjct: 1144 atggagggcgaagaaacatttgatcc 1169
>dbj|D11351.1|ATHTCP1H A. thaliana mRNA for t-complex polypeptide 1 homologue, complete cds Length = 2024 Score = 155 bits (78), Expect = 2e-34 Identities = 264/326 (80%) Strand = Plus / Plus Query: 113 attgcttgtcttgatttcaaccttcagaagacgaaaatgcaaatgggtgttcaagtcctt 172 |||||||| ||||| ||||| || |||||||| |||||||| ||||||| ||||| || Sbjct: 843 attgcttgccttgacttcaatctgcagaagacaaaaatgcagctgggtgtccaagttgtt 902 Query: 173 gtatctgatccaagggaactggagaagatccgtgagagggaatctgacataacaaaggag 232 || ||| ||| | ||||| || ||||||||| | || ||| ||||||| ||||| ||| Sbjct: 903 gttaatgacccacgagaacttgaaaagatccgtcaaagagaagctgacatgacaaaagag 962 Query: 233 cgaattgagaaagttctcaaggctggtgctaatgttgtatttaccaccaagggaattgat 292 || || |||||| ||||||| ||||| || ||||| | | ||||| ||||| ||||| Sbjct: 963 cggatagagaaacttctcaaagctggggccaatgtaattctgaccacaaaggggattgac 1022 Query: 293 gatatgtcattgaagtactttgttgaggctggagcaattgcagtaagacgtgtgcgtaag 352 || ||| || | || |||||||| ||||| ||||| ||||| || || |||||||| || Sbjct: 1023 gacatggcacttaaatactttgtagaggcaggagctattgctgttaggcgtgtgcgcaaa 1082 Query: 353 gaggatttgcgccatgttgccaaggcaacaggtgcgacaatggtgactacttttgctgac 412 || || |||| |||||||||||||| ||||| ||||| |||| || |||||||||||| Sbjct: 1083 gaagacatgcgtcatgttgccaaggcgacaggagcgactctggtcaccacttttgctgac 1142 Query: 413 atggagggtgaagaaacatttgatcc 438 |||||||| ||||||||||||||||| Sbjct: 1143 atggagggcgaagaaacatttgatcc 1168
>gb|BT021103.1| Arabidopsis thaliana At3g20050 gene, complete cds Length = 1718 Score = 155 bits (78), Expect = 2e-34 Identities = 264/326 (80%) Strand = Plus / Plus Query: 113 attgcttgtcttgatttcaaccttcagaagacgaaaatgcaaatgggtgttcaagtcctt 172 |||||||| ||||| ||||| || |||||||| |||||||| ||||||| ||||| || Sbjct: 760 attgcttgccttgacttcaatctgcagaagacaaaaatgcagctgggtgtccaagttgtt 819 Query: 173 gtatctgatccaagggaactggagaagatccgtgagagggaatctgacataacaaaggag 232 || ||| ||| | ||||| || ||||||||| | || ||| ||||||| ||||| ||| Sbjct: 820 gttaatgacccacgagaacttgaaaagatccgtcaaagagaagctgacatgacaaaagag 879 Query: 233 cgaattgagaaagttctcaaggctggtgctaatgttgtatttaccaccaagggaattgat 292 || || |||||| ||||||| ||||| || ||||| | | ||||| ||||| ||||| Sbjct: 880 cggatagagaaacttctcaaagctggggccaatgtaattctgaccacaaaggggattgac 939 Query: 293 gatatgtcattgaagtactttgttgaggctggagcaattgcagtaagacgtgtgcgtaag 352 || ||| || | || |||||||| ||||| ||||| ||||| || || |||||||| || Sbjct: 940 gacatggcacttaaatactttgtagaggcaggagctattgctgttaggcgtgtgcgcaaa 999 Query: 353 gaggatttgcgccatgttgccaaggcaacaggtgcgacaatggtgactacttttgctgac 412 || || |||| |||||||||||||| ||||| ||||| |||| || |||||||||||| Sbjct: 1000 gaagacatgcgtcatgttgccaaggcgacaggagcgactctggtcaccacttttgctgac 1059 Query: 413 atggagggtgaagaaacatttgatcc 438 |||||||| ||||||||||||||||| Sbjct: 1060 atggagggcgaagaaacatttgatcc 1085
>gb|AC152752.18| Medicago truncatula clone mth2-89c9, complete sequence Length = 117577 Score = 147 bits (74), Expect = 5e-32 Identities = 134/154 (87%) Strand = Plus / Minus Query: 45 tgaatggttatgcgctgaacactggccgtgctgctcaaggaatgcctaccagagtaaccc 104 ||||||||||||| || || ||||| |||||||| |||||||||||| || ||| ||| Sbjct: 5033 tgaatggttatgctcttaatactggacgtgctgcccaaggaatgcctcttagggtatccc 4974 Query: 105 ctgctagaattgcttgtcttgatttcaaccttcagaagacgaaaatgcaaatgggtgttc 164 |||||| ||||||||||||||||||||| ||||||||||| ||||||||| ||||||||| Sbjct: 4973 ctgctaaaattgcttgtcttgatttcaatcttcagaagacaaaaatgcaattgggtgttc 4914 Query: 165 aagtccttgtatctgatccaagggaactggagaa 198 |||| | || |||||||| |||||||| ||||| Sbjct: 4913 aagtattagtttctgatcccagggaactcgagaa 4880 Score = 85.7 bits (43), Expect = 2e-13 Identities = 79/91 (86%) Strand = Plus / Minus Query: 306 agtactttgttgaggctggagcaattgcagtaagacgtgtgcgtaaggaggatttgcgcc 365 ||||||||||||||||||| |||||||| || ||||||||||| || || ||| |||| | Sbjct: 4037 agtactttgttgaggctggtgcaattgctgtgagacgtgtgcggaaagaagatatgcgtc 3978 Query: 366 atgttgccaaggcaacaggtgcgacaatggt 396 |||||||||| ||||| ||||| ||| |||| Sbjct: 3977 atgttgccaaagcaaccggtgcaacattggt 3947
>gb|AC141106.9| Medicago truncatula clone mth2-33e18, complete sequence Length = 105951 Score = 147 bits (74), Expect = 5e-32 Identities = 134/154 (87%) Strand = Plus / Plus Query: 45 tgaatggttatgcgctgaacactggccgtgctgctcaaggaatgcctaccagagtaaccc 104 ||||||||||||| || || ||||| |||||||| |||||||||||| || ||| ||| Sbjct: 1440 tgaatggttatgctcttaatactggacgtgctgcccaaggaatgcctcttagggtatccc 1499 Query: 105 ctgctagaattgcttgtcttgatttcaaccttcagaagacgaaaatgcaaatgggtgttc 164 |||||| ||||||||||||||||||||| ||||||||||| ||||||||| ||||||||| Sbjct: 1500 ctgctaaaattgcttgtcttgatttcaatcttcagaagacaaaaatgcaattgggtgttc 1559 Query: 165 aagtccttgtatctgatccaagggaactggagaa 198 |||| | || |||||||| |||||||| ||||| Sbjct: 1560 aagtattagtttctgatcccagggaactcgagaa 1593 Score = 85.7 bits (43), Expect = 2e-13 Identities = 79/91 (86%) Strand = Plus / Plus Query: 306 agtactttgttgaggctggagcaattgcagtaagacgtgtgcgtaaggaggatttgcgcc 365 ||||||||||||||||||| |||||||| || ||||||||||| || || ||| |||| | Sbjct: 2436 agtactttgttgaggctggtgcaattgctgtgagacgtgtgcggaaagaagatatgcgtc 2495 Query: 366 atgttgccaaggcaacaggtgcgacaatggt 396 |||||||||| ||||| ||||| ||| |||| Sbjct: 2496 atgttgccaaagcaaccggtgcaacattggt 2526
>gb|AC157758.4| Medicago truncatula clone mth2-62b13, complete sequence Length = 106286 Score = 147 bits (74), Expect = 5e-32 Identities = 134/154 (87%) Strand = Plus / Plus Query: 45 tgaatggttatgcgctgaacactggccgtgctgctcaaggaatgcctaccagagtaaccc 104 ||||||||||||| || || ||||| |||||||| |||||||||||| || ||| ||| Sbjct: 69608 tgaatggttatgctcttaatactggacgtgctgcccaaggaatgcctcttagggtatccc 69667 Query: 105 ctgctagaattgcttgtcttgatttcaaccttcagaagacgaaaatgcaaatgggtgttc 164 |||||| ||||||||||||||||||||| ||||||||||| ||||||||| ||||||||| Sbjct: 69668 ctgctaaaattgcttgtcttgatttcaatcttcagaagacaaaaatgcaattgggtgttc 69727 Query: 165 aagtccttgtatctgatccaagggaactggagaa 198 |||| | || |||||||| |||||||| ||||| Sbjct: 69728 aagtattagtttctgatcccagggaactcgagaa 69761 Score = 85.7 bits (43), Expect = 2e-13 Identities = 79/91 (86%) Strand = Plus / Plus Query: 306 agtactttgttgaggctggagcaattgcagtaagacgtgtgcgtaaggaggatttgcgcc 365 ||||||||||||||||||| |||||||| || ||||||||||| || || ||| |||| | Sbjct: 70604 agtactttgttgaggctggtgcaattgctgtgagacgtgtgcggaaagaagatatgcgtc 70663 Query: 366 atgttgccaaggcaacaggtgcgacaatggt 396 |||||||||| ||||| ||||| ||| |||| Sbjct: 70664 atgttgccaaagcaaccggtgcaacattggt 70694
>emb|BX823612.1|CNS0A4WG Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS56ZH05 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1961 Score = 139 bits (70), Expect = 1e-29 Identities = 262/326 (80%) Strand = Plus / Plus Query: 113 attgcttgtcttgatttcaaccttcagaagacgaaaatgcaaatgggtgttcaagtcctt 172 |||||||| ||||| ||||| || |||||||| || |||| ||||||| ||||| || Sbjct: 828 attgcttgccttgacttcaatctgcagaagacaaaggtgcagctgggtgtccaagttgtt 887 Query: 173 gtatctgatccaagggaactggagaagatccgtgagagggaatctgacataacaaaggag 232 || ||| ||| | ||||| || ||||||||| | || ||| ||||||| ||||| ||| Sbjct: 888 gttaatgacccacgagaacttgaaaagatccgtcaaagagaagctgacatgacaaaagag 947 Query: 233 cgaattgagaaagttctcaaggctggtgctaatgttgtatttaccaccaagggaattgat 292 || || |||||| ||||||| ||||| || ||||| | | ||||| ||||| ||||| Sbjct: 948 cggatagagaaacttctcaaagctggggccaatgtaattctgaccacaaaggggattgac 1007 Query: 293 gatatgtcattgaagtactttgttgaggctggagcaattgcagtaagacgtgtgcgtaag 352 || ||| || | || |||||||| ||||| ||||| ||||| || || |||||||| || Sbjct: 1008 gacatggcacttaaatactttgtagaggcaggagctattgctgttaggcgtgtgcgcaaa 1067 Query: 353 gaggatttgcgccatgttgccaaggcaacaggtgcgacaatggtgactacttttgctgac 412 || || |||| |||||||||||||| ||||| ||||| |||| || |||||||||||| Sbjct: 1068 gaagacatgcgtcatgttgccaaggcgacaggagcgactctggtcaccacttttgctgac 1127 Query: 413 atggagggtgaagaaacatttgatcc 438 |||||||| ||||||||||||||||| Sbjct: 1128 atggagggcgaagaaacatttgatcc 1153
>gb|BT012800.1| Lycopersicon esculentum clone 113815R, mRNA sequence Length = 2210 Score = 137 bits (69), Expect = 5e-29 Identities = 237/293 (80%) Strand = Plus / Plus Query: 284 ggaattgatgatatgtcattgaagtactttgttgaggctggagcaattgcagtaagacgt 343 ||||||||||| ||| || ||||||||||||| || ||||| || ||||| || |||||| Sbjct: 1016 ggaattgatgacatggcactgaagtactttgtggaagctggtgccattgcggtcagacgt 1075 Query: 344 gtgcgtaaggaggatttgcgccatgttgccaaggcaacaggtgcgacaatggtgactact 403 || || || || ||||||||||||||||| |||||||| ||||| || |||| | || Sbjct: 1076 gtacgcaaagaagatttgcgccatgttgctaaggcaaccggtgcaactgtggtctcaaca 1135 Query: 404 tttgctgacatggagggtgaagaaacatttgatccttcctttcttggacatgccgacgag 463 |||||||| ||||| || |||||||| ||||| || || |||||||||||||| || ||| Sbjct: 1136 tttgctgatatggaaggagaagaaacttttgaaccatcatttcttggacatgctgatgag 1195 Query: 464 gtcgttgaggaaaggatttctgatgatgaaataattctagtgaaaggcacaaagaacaca 523 || || ||||| | ||| |||||||||| | ||| | || ||||| || || | | || Sbjct: 1196 gtggtggaggagcgaattgctgatgatgatgtgattatggttaaaggaaccaaaacctca 1255 Query: 524 agtgcggtttccattatactcagaggagcaaatgacttcatgctagacgagat 576 ||| ||||||| | ||||| ||||| ||||||||||| ||||| |||||||| Sbjct: 1256 agttcggtttcattaatacttagaggtgcaaatgactttatgcttgacgagat 1308 Score = 105 bits (53), Expect = 2e-19 Identities = 134/161 (83%) Strand = Plus / Plus Query: 8 aaagctcatggtaaaagtgccaaggaaagttacctgctgaatggttatgcgctgaacact 67 ||||| ||||| |||||||| || || || || || |||| |||||||| ||||| ||| Sbjct: 740 aaagcacatggaaaaagtgcaaaagatagctatctattgaagggttatgcactgaatact 799 Query: 68 ggccgtgctgctcaaggaatgcctaccagagtaacccctgctagaattgcttgtcttgat 127 ||||||||||| |||||||||||| ||||| | ||||| | |||||||||||||| Sbjct: 800 ggccgtgctgcccaaggaatgcctctgagagttgcgcctgcacggattgcttgtcttgac 859 Query: 128 ttcaaccttcagaagacgaaaatgcaaatgggtgttcaagt 168 ||||| ||||| ||||| |||||||| |||||||||||||| Sbjct: 860 ttcaatcttcaaaagacaaaaatgcagatgggtgttcaagt 900
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 119 bits (60), Expect = 1e-23 Identities = 81/88 (92%) Strand = Plus / Minus Query: 111 gaattgcttgtcttgatttcaaccttcagaagacgaaaatgcaaatgggtgttcaagtcc 170 ||||||| ||||||| |||||||||||||||||| ||| ||||| ||||||||||||||| Sbjct: 2617890 gaattgcatgtcttggtttcaaccttcagaagacaaaagtgcaattgggtgttcaagtcc 2617831 Query: 171 ttgtatctgatccaagggaactggagaa 198 ||||| |||||||||||||||| ||||| Sbjct: 2617830 ttgtaactgatccaagggaacttgagaa 2617803 Score = 54.0 bits (27), Expect = 6e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 219 acataacaaaggagcgaattgagaaagttct 249 |||||||||||||||||||||||||| |||| Sbjct: 2617794 acataacaaaggagcgaattgagaaaattct 2617764
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 119 bits (60), Expect = 1e-23 Identities = 81/88 (92%) Strand = Plus / Minus Query: 111 gaattgcttgtcttgatttcaaccttcagaagacgaaaatgcaaatgggtgttcaagtcc 170 ||||||| ||||||| |||||||||||||||||| ||| ||||| ||||||||||||||| Sbjct: 2617834 gaattgcatgtcttggtttcaaccttcagaagacaaaagtgcaattgggtgttcaagtcc 2617775 Query: 171 ttgtatctgatccaagggaactggagaa 198 ||||| |||||||||||||||| ||||| Sbjct: 2617774 ttgtaactgatccaagggaacttgagaa 2617747 Score = 54.0 bits (27), Expect = 6e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 219 acataacaaaggagcgaattgagaaagttct 249 |||||||||||||||||||||||||| |||| Sbjct: 2617738 acataacaaaggagcgaattgagaaaattct 2617708
>emb|AL929350.3|CNS08CCE Oryza sativa chromosome 12, . BAC OSJNBb0104J15 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 136490 Score = 119 bits (60), Expect = 1e-23 Identities = 81/88 (92%) Strand = Plus / Plus Query: 111 gaattgcttgtcttgatttcaaccttcagaagacgaaaatgcaaatgggtgttcaagtcc 170 ||||||| ||||||| |||||||||||||||||| ||| ||||| ||||||||||||||| Sbjct: 50119 gaattgcatgtcttggtttcaaccttcagaagacaaaagtgcaattgggtgttcaagtcc 50178 Query: 171 ttgtatctgatccaagggaactggagaa 198 ||||| |||||||||||||||| ||||| Sbjct: 50179 ttgtaactgatccaagggaacttgagaa 50206 Score = 54.0 bits (27), Expect = 6e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 219 acataacaaaggagcgaattgagaaagttct 249 |||||||||||||||||||||||||| |||| Sbjct: 50215 acataacaaaggagcgaattgagaaaattct 50245
>dbj|D17782.1|RICKN3218 Oryza sativa KN32 mRNA for T complex polypeptide, partial sequence Length = 485 Score = 109 bits (55), Expect = 1e-20 Identities = 76/83 (91%) Strand = Plus / Plus Query: 587 ttgcacgatgcactgtgcattgtgaagagaactttggaatccaatacggtagttgctggt 646 ||||| |||||| |||||||||||||||||||| |||||||||||| ||| ||||||||| Sbjct: 10 ttgcatgatgcattgtgcattgtgaagagaactctggaatccaatatggttgttgctggt 69 Query: 647 ggtggtgctgtagaagctgcatt 669 |||||||| || ||||||||||| Sbjct: 70 ggtggtgcagttgaagctgcatt 92
>ref|XM_758108.1| Theileria parva strain Muguga chromosome 3 T-complex protein 1 subunit alpha (TP03_0183) partial mRNA Length = 1647 Score = 75.8 bits (38), Expect = 2e-10 Identities = 50/54 (92%) Strand = Plus / Plus Query: 282 agggaattgatgatatgtcattgaagtactttgttgaggctggagcaattgcag 335 ||||||||||||||||||| |||||||||||||||| ||||||| |||||||| Sbjct: 863 agggaattgatgatatgtcgatgaagtactttgttgaagctggagtaattgcag 916
>dbj|AP000383.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone:MAL21 Length = 83253 Score = 67.9 bits (34), Expect = 4e-08 Identities = 37/38 (97%) Strand = Plus / Minus Query: 401 acttttgctgacatggagggtgaagaaacatttgatcc 438 |||||||||||||||||||| ||||||||||||||||| Sbjct: 19908 acttttgctgacatggagggcgaagaaacatttgatcc 19871 Score = 58.0 bits (29), Expect = 4e-05 Identities = 71/85 (83%) Strand = Plus / Minus Query: 306 agtactttgttgaggctggagcaattgcagtaagacgtgtgcgtaaggaggatttgcgcc 365 |||||||||| ||||| ||||| ||||| || || |||||||| || || || |||| | Sbjct: 20082 agtactttgtagaggcaggagctattgctgttaggcgtgtgcgcaaagaagacatgcgtc 20023 Query: 366 atgttgccaaggcaacaggtgcgac 390 ||||||||||||| ||||| ||||| Sbjct: 20022 atgttgccaaggcgacaggagcgac 19998
>dbj|D11352.1| Arabidopsis thaliana DNA for CCT alpha/TCP-1, complete cds Length = 6533 Score = 67.9 bits (34), Expect = 4e-08 Identities = 37/38 (97%) Strand = Plus / Plus Query: 401 acttttgctgacatggagggtgaagaaacatttgatcc 438 |||||||||||||||||||| ||||||||||||||||| Sbjct: 4274 acttttgctgacatggagggcgaagaaacatttgatcc 4311 Score = 58.0 bits (29), Expect = 4e-05 Identities = 71/85 (83%) Strand = Plus / Plus Query: 306 agtactttgttgaggctggagcaattgcagtaagacgtgtgcgtaaggaggatttgcgcc 365 |||||||||| ||||| ||||| ||||| || || |||||||| || || || |||| | Sbjct: 4100 agtactttgtagaggcaggagctattgctgttaggcgtgtgcgcaaagaagacatgcgtc 4159 Query: 366 atgttgccaaggcaacaggtgcgac 390 ||||||||||||| ||||| ||||| Sbjct: 4160 atgttgccaaggcgacaggagcgac 4184
>ref|XM_949787.1| Theileria annulata strain Ankara t-complex polypeptide 1 (TA03225) partial mRNA Length = 1647 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Plus Query: 282 agggaattgatgatatgtcattgaagtactttgttgaggctggagcaattgcag 335 ||||||| ||||||||||| |||| ||||||||||| ||||||| ||||||| Sbjct: 863 agggaatcgatgatatgtcgatgaaatactttgttgaagctggagtgattgcag 916
>ref|XM_718720.1| Plasmodium yoelii yoelii str. 17XNL t-complex protein 1 subunit alpha (PY03629) partial mRNA Length = 1509 Score = 50.1 bits (25), Expect = 0.010 Identities = 46/53 (86%) Strand = Plus / Plus Query: 284 ggaattgatgatatgtcattgaagtactttgttgaggctggagcaattgcagt 336 ||||| ||||||||| |||| || || |||||||| ||||||||||| ||||| Sbjct: 742 ggaatagatgatatgccattaaaatattttgttgaagctggagcaatagcagt 794
>gb|AF322049.1| Naegleria gruberi chaperonin subunit alpha gene, partial cds Length = 1443 Score = 50.1 bits (25), Expect = 0.010 Identities = 55/65 (84%) Strand = Plus / Plus Query: 254 gctggtgctaatgttgtatttaccaccaagggaattgatgatatgtcattgaagtacttt 313 ||||||||||| ||| | || || || ||||| ||||||||||||| ||||| |||||| Sbjct: 709 gctggtgctaacgttattttgacaacaaagggtattgatgatatgtgtttgaaatacttt 768 Query: 314 gttga 318 ||||| Sbjct: 769 gttga 773
>emb|Z92785.1|CEF31E9 Caenorhabditis elegans Cosmid F31E9, complete sequence Length = 16865 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Plus Query: 188 gaactggagaagatccgtgagag 210 ||||||||||||||||||||||| Sbjct: 12773 gaactggagaagatccgtgagag 12795
>gb|AC165178.2| Zea mays clone ZMMBBb-272P17, complete sequence Length = 131485 Score = 46.1 bits (23), Expect = 0.15 Identities = 32/35 (91%) Strand = Plus / Minus Query: 497 attctagtgaaaggcacaaagaacacaagtgcggt 531 ||||| |||||||||||||||||||| || ||||| Sbjct: 13911 attctggtgaaaggcacaaagaacaccagcgcggt 13877
>dbj|BA000023.2| Sulfolobus tokodaii str. 7 DNA, complete genome Length = 2694756 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Plus Query: 638 gttgctggtggtggtgctgtaga 660 ||||||||||||||||||||||| Sbjct: 1253922 gttgctggtggtggtgctgtaga 1253944
>ref|NM_074985.1| Caenorhabditis elegans SKN-1 Dependent Zygotic transcript family member (sdz-16) (sdz-16) mRNA, complete cds Length = 1035 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 188 gaactggagaagatccgtgagag 210 ||||||||||||||||||||||| Sbjct: 576 gaactggagaagatccgtgagag 554
>dbj|AB001085.1| Sulfolobus sp. DNA for chaperonin alpha subunit, complete cds Length = 1950 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Plus Query: 638 gttgctggtggtggtgctgtaga 660 ||||||||||||||||||||||| Sbjct: 1363 gttgctggtggtggtgctgtaga 1385
>ref|XM_641715.1| Dictyostelium discoideum hypothetical protein (DDB0191128), partial mRNA Length = 1647 Score = 44.1 bits (22), Expect = 0.59 Identities = 58/70 (82%) Strand = Plus / Plus Query: 255 ctggtgctaatgttgtatttaccaccaagggaattgatgatatgtcattgaagtactttg 314 ||||||| ||||||||| | |||||||| || || |||||| | | ||||| ||||||| Sbjct: 845 ctggtgcaaatgttgtactcaccaccaaaggtatcgatgatttatgtttgaaatactttg 904 Query: 315 ttgaggctgg 324 |||| ||||| Sbjct: 905 ttgaagctgg 914
>emb|Z82210.2|HS431C21 Human DNA sequence from clone RP3-431C21 on chromosome Xq21 Contains a ribosomal protein L7 (RPL7) pseudogene, complete sequence Length = 118426 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Plus Query: 430 atttgatccttcctttcttgga 451 |||||||||||||||||||||| Sbjct: 38104 atttgatccttcctttcttgga 38125
>gb|AC107976.4| Homo sapiens chromosome 15, clone CTD-2576F9, complete sequence Length = 131548 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Plus Query: 543 tcagaggagcaaatgacttcat 564 |||||||||||||||||||||| Sbjct: 35048 tcagaggagcaaatgacttcat 35069
>gb|AC132220.10| Homo sapiens chromosome 15, clone RP11-1142D4, complete sequence Length = 162101 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Minus Query: 543 tcagaggagcaaatgacttcat 564 |||||||||||||||||||||| Sbjct: 96502 tcagaggagcaaatgacttcat 96481
>dbj|AK112372.1| Ciona intestinalis cDNA, clone:ciad040j01, full insert sequence Length = 2020 Score = 44.1 bits (22), Expect = 0.59 Identities = 43/50 (86%) Strand = Plus / Plus Query: 125 gatttcaaccttcagaagacgaaaatgcaaatgggtgttcaagtccttgt 174 |||||||| ||||||||||| |||||| | ||||| ||||| ||||||| Sbjct: 759 gatttcaatcttcagaagaccaaaatgaagatgggagttcacatccttgt 808 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 8 aaagctcatggtaaaagtgc 27 |||||||||||||||||||| Sbjct: 642 aaagctcatggtaaaagtgc 661
>ref|XM_640901.1| Dictyostelium discoideum hypothetical protein (DDB0190286), partial mRNA Length = 927 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 636 tagttgctggtggtggtgctg 656 ||||||||||||||||||||| Sbjct: 638 tagttgctggtggtggtgctg 658
>ref|XM_519060.1| PREDICTED: Pan troglodytes similar to t-complex 1; T-complex locus TCP-1; t-complex 1 (a murine tcp homolog) (LOC463368), mRNA Length = 1155 Score = 42.1 bits (21), Expect = 2.3 Identities = 36/41 (87%) Strand = Plus / Plus Query: 284 ggaattgatgatatgtcattgaagtactttgttgaggctgg 324 |||||||||||||||| ||||||| ||||| |||||||| Sbjct: 903 ggaattgatgatatgtgtctgaagtattttgtggaggctgg 943
>gb|AY549305.1| Dicentrarchus labrax glucocorticoid receptor mRNA, complete cds Length = 2457 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 638 gttgctggtggtggtgctgtagaag 662 |||||||||| |||||||||||||| Sbjct: 868 gttgctggtgctggtgctgtagaag 844
>gb|AC006494.13| Drosophila melanogaster clone BACR48C17, complete sequence Length = 164501 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 303 tgaagtactttgttgaggctggagc 327 |||||||||| |||||||||||||| Sbjct: 66246 tgaagtacttcgttgaggctggagc 66222
>gb|AC008196.8| Drosophila melanogaster clone BACR30J14, complete sequence Length = 179562 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 303 tgaagtactttgttgaggctggagc 327 |||||||||| |||||||||||||| Sbjct: 118959 tgaagtacttcgttgaggctggagc 118935
>ref|NM_030752.2| Homo sapiens t-complex 1 (TCP1), transcript variant 1, mRNA Length = 2463 Score = 42.1 bits (21), Expect = 2.3 Identities = 36/41 (87%) Strand = Plus / Plus Query: 284 ggaattgatgatatgtcattgaagtactttgttgaggctgg 324 |||||||||||||||| ||||||| ||||| |||||||| Sbjct: 1106 ggaattgatgatatgtgtctgaagtattttgtggaggctgg 1146
>ref|NM_001008897.1| Homo sapiens t-complex 1 (TCP1), transcript variant 2, mRNA Length = 2377 Score = 42.1 bits (21), Expect = 2.3 Identities = 36/41 (87%) Strand = Plus / Plus Query: 284 ggaattgatgatatgtcattgaagtactttgttgaggctgg 324 |||||||||||||||| ||||||| ||||| |||||||| Sbjct: 1020 ggaattgatgatatgtgtctgaagtattttgtggaggctgg 1060
>gb|AC027269.5| Homo sapiens BAC clone RP11-100C21 from 7, complete sequence Length = 159698 Score = 42.1 bits (21), Expect = 2.3 Identities = 36/41 (87%) Strand = Plus / Minus Query: 284 ggaattgatgatatgtcattgaagtactttgttgaggctgg 324 |||||||||||||||| ||||||| ||||| |||||||| Sbjct: 5434 ggaattgatgatatgtgtctgaagtattttgtggaggctgg 5394
>ref|XM_670282.1| Plasmodium berghei strain ANKA t-complex protein 1, alpha subunit (PB001037.03.0) partial mRNA Length = 1632 Score = 42.1 bits (21), Expect = 2.3 Identities = 45/53 (84%) Strand = Plus / Plus Query: 284 ggaattgatgatatgtcattgaagtactttgttgaggctggagcaattgcagt 336 ||||| ||||||||| |||| || || ||||| || ||||||||||| ||||| Sbjct: 865 ggaatagatgatatgccattaaaatattttgtcgaagctggagcaatagcagt 917
>emb|AL135914.25| Human DNA sequence from clone RP1-56L9 on chromosome 6 Contains a novel gene, the SOD2 gene for superoxide dismutase 2, mitochondrial, a pseudogene similar to heterogenous nuclear ribonucleoprotein H, the gene for Wilms' tumor 1-associating protein (KIAA0105) (WTAP), the ACAT2 gene for acetyl-Coenzyme A acetyltransferase 2 (acetoacetyl Coenzyme A thiolase), the TCP1 gene for t-complex 1 (CCT1, Ccta, D6S230E), the 5' end of the MRPL18 gene for mitochondrial ribosomal protein L18, and 4 CpG islands, complete sequence Length = 165802 Score = 42.1 bits (21), Expect = 2.3 Identities = 36/41 (87%) Strand = Plus / Minus Query: 284 ggaattgatgatatgtcattgaagtactttgttgaggctgg 324 |||||||||||||||| ||||||| ||||| |||||||| Sbjct: 152720 ggaattgatgatatgtgtctgaagtattttgtggaggctgg 152680
>emb|X52882.1|HSTCP1 Homo sapiens mRNA for t-complex polypeptide 1 (TCP1 gene) Length = 2019 Score = 42.1 bits (21), Expect = 2.3 Identities = 36/41 (87%) Strand = Plus / Plus Query: 284 ggaattgatgatatgtcattgaagtactttgttgaggctgg 324 |||||||||||||||| ||||||| ||||| |||||||| Sbjct: 892 ggaattgatgatatgtgtctgaagtattttgtggaggctgg 932
>gb|BT007686.1| Synthetic construct Homo sapiens t-complex 1 mRNA, partial cds Length = 1671 Score = 42.1 bits (21), Expect = 2.3 Identities = 36/41 (87%) Strand = Plus / Plus Query: 284 ggaattgatgatatgtcattgaagtactttgttgaggctgg 324 |||||||||||||||| ||||||| ||||| |||||||| Sbjct: 871 ggaattgatgatatgtgtctgaagtattttgtggaggctgg 911
>gb|BT006969.1| Homo sapiens t-complex 1 mRNA, complete cds Length = 1671 Score = 42.1 bits (21), Expect = 2.3 Identities = 36/41 (87%) Strand = Plus / Plus Query: 284 ggaattgatgatatgtcattgaagtactttgttgaggctgg 324 |||||||||||||||| ||||||| ||||| |||||||| Sbjct: 871 ggaattgatgatatgtgtctgaagtattttgtggaggctgg 911
>emb|CR615945.1| full-length cDNA clone CS0DI068YA09 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1916 Score = 42.1 bits (21), Expect = 2.3 Identities = 36/41 (87%) Strand = Plus / Plus Query: 284 ggaattgatgatatgtcattgaagtactttgttgaggctgg 324 |||||||||||||||| ||||||| ||||| |||||||| Sbjct: 1054 ggaattgatgatatgtgtctgaagtattttgtggaggctgg 1094
>emb|CR624087.1| full-length cDNA clone CS0DM007YN14 of Fetal liver of Homo sapiens (human) Length = 1865 Score = 42.1 bits (21), Expect = 2.3 Identities = 36/41 (87%) Strand = Plus / Plus Query: 284 ggaattgatgatatgtcattgaagtactttgttgaggctgg 324 |||||||||||||||| ||||||| ||||| |||||||| Sbjct: 999 ggaattgatgatatgtgtctgaagtattttgtggaggctgg 1039
>emb|CR622372.1| full-length cDNA clone CS0DE005YN05 of Placenta of Homo sapiens (human) Length = 1671 Score = 42.1 bits (21), Expect = 2.3 Identities = 36/41 (87%) Strand = Plus / Plus Query: 284 ggaattgatgatatgtcattgaagtactttgttgaggctgg 324 |||||||||||||||| ||||||| ||||| |||||||| Sbjct: 975 ggaattgatgatatgtgtctgaagtattttgtggaggctgg 1015
>gb|AY118416.1| Drosophila melanogaster RE70560 full insert cDNA Length = 1992 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 303 tgaagtactttgttgaggctggagc 327 |||||||||| |||||||||||||| Sbjct: 1003 tgaagtacttcgttgaggctggagc 1027
>emb|CR619708.1| full-length cDNA clone CS0DM008YF16 of Fetal liver of Homo sapiens (human) Length = 1879 Score = 42.1 bits (21), Expect = 2.3 Identities = 36/41 (87%) Strand = Plus / Plus Query: 284 ggaattgatgatatgtcattgaagtactttgttgaggctgg 324 |||||||||||||||| ||||||| ||||| |||||||| Sbjct: 999 ggaattgatgatatgtgtctgaagtattttgtggaggctgg 1039
>emb|CR617240.1| full-length cDNA clone CS0DF015YF13 of Fetal brain of Homo sapiens (human) Length = 1771 Score = 42.1 bits (21), Expect = 2.3 Identities = 36/41 (87%) Strand = Plus / Plus Query: 284 ggaattgatgatatgtcattgaagtactttgttgaggctgg 324 |||||||||||||||| ||||||| ||||| |||||||| Sbjct: 913 ggaattgatgatatgtgtctgaagtattttgtggaggctgg 953
>emb|CR613792.1| full-length cDNA clone CS0DA009YM15 of Neuroblastoma of Homo sapiens (human) Length = 1934 Score = 42.1 bits (21), Expect = 2.3 Identities = 36/41 (87%) Strand = Plus / Plus Query: 284 ggaattgatgatatgtcattgaagtactttgttgaggctgg 324 |||||||||||||||| ||||||| ||||| |||||||| Sbjct: 1054 ggaattgatgatatgtgtctgaagtattttgtggaggctgg 1094
>emb|CR609567.1| full-length cDNA clone CS0DA001YB20 of Neuroblastoma of Homo sapiens (human) Length = 1887 Score = 42.1 bits (21), Expect = 2.3 Identities = 36/41 (87%) Strand = Plus / Plus Query: 284 ggaattgatgatatgtcattgaagtactttgttgaggctgg 324 |||||||||||||||| ||||||| ||||| |||||||| Sbjct: 999 ggaattgatgatatgtgtctgaagtattttgtggaggctgg 1039
>emb|CR608240.1| full-length cDNA clone CS0DJ010YC20 of T cells (Jurkat cell line) Cot 10-normalized of Homo sapiens (human) Length = 1877 Score = 42.1 bits (21), Expect = 2.3 Identities = 36/41 (87%) Strand = Plus / Plus Query: 284 ggaattgatgatatgtcattgaagtactttgttgaggctgg 324 |||||||||||||||| ||||||| ||||| |||||||| Sbjct: 999 ggaattgatgatatgtgtctgaagtattttgtggaggctgg 1039
>emb|CR606609.1| full-length cDNA clone CS0DG007YK04 of B cells (Ramos cell line) of Homo sapiens (human) Length = 1849 Score = 42.1 bits (21), Expect = 2.3 Identities = 36/41 (87%) Strand = Plus / Plus Query: 284 ggaattgatgatatgtcattgaagtactttgttgaggctgg 324 |||||||||||||||| ||||||| ||||| |||||||| Sbjct: 986 ggaattgatgatatgtgtctgaagtattttgtggaggctgg 1026
>emb|CR603769.1| full-length cDNA clone CS0DH001YN13 of T cells (Jurkat cell line) of Homo sapiens (human) Length = 1403 Score = 42.1 bits (21), Expect = 2.3 Identities = 36/41 (87%) Strand = Plus / Plus Query: 284 ggaattgatgatatgtcattgaagtactttgttgaggctgg 324 |||||||||||||||| ||||||| ||||| |||||||| Sbjct: 522 ggaattgatgatatgtgtctgaagtattttgtggaggctgg 562
>emb|CR596767.1| full-length cDNA clone CS0DI042YC05 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1917 Score = 42.1 bits (21), Expect = 2.3 Identities = 36/41 (87%) Strand = Plus / Plus Query: 284 ggaattgatgatatgtcattgaagtactttgttgaggctgg 324 |||||||||||||||| ||||||| ||||| |||||||| Sbjct: 1056 ggaattgatgatatgtgtctgaagtattttgtggaggctgg 1096
>emb|CR590270.1| full-length cDNA clone CS0DN005YK21 of Adult brain of Homo sapiens (human) Length = 1923 Score = 42.1 bits (21), Expect = 2.3 Identities = 36/41 (87%) Strand = Plus / Plus Query: 284 ggaattgatgatatgtcattgaagtactttgttgaggctgg 324 |||||||||||||||| ||||||| ||||| |||||||| Sbjct: 1062 ggaattgatgatatgtgtctgaagtattttgtggaggctgg 1102
>ref|NM_170016.1| Drosophila melanogaster Tcp1-like CG5374-RB, transcript variant B (T-cp1), mRNA Length = 1928 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 303 tgaagtactttgttgaggctggagc 327 |||||||||| |||||||||||||| Sbjct: 935 tgaagtacttcgttgaggctggagc 959
>ref|NM_079726.3| Drosophila melanogaster Tcp1-like CG5374-RA, transcript variant A (T-cp1), mRNA Length = 1992 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 303 tgaagtactttgttgaggctggagc 327 |||||||||| |||||||||||||| Sbjct: 999 tgaagtacttcgttgaggctggagc 1023
>gb|AE017340.1| Idiomarina loihiensis L2TR, complete genome Length = 2839318 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 250 caaggctggtgctaatgttgt 270 ||||||||||||||||||||| Sbjct: 89586 caaggctggtgctaatgttgt 89606
>dbj|AB169581.1| Macaca fascicularis brain cDNA, clone: QnpA-12515, similar to human t-complex 1 (TCP1), mRNA, RefSeq: NM_030752.1 Length = 2364 Score = 42.1 bits (21), Expect = 2.3 Identities = 36/41 (87%) Strand = Plus / Plus Query: 284 ggaattgatgatatgtcattgaagtactttgttgaggctgg 324 |||||||||||||||| ||||||| ||||| |||||||| Sbjct: 1005 ggaattgatgatatgtgtctgaagtattttgtggaggctgg 1045
>ref|XM_626296.1| Cryptosporidium parvum Iowa II t-complex protein 1, alpha subunit (cgd2_600), partial mRNA Length = 1704 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 369 ttgccaaggcaacaggtgcgacaat 393 |||||||||||||||| |||||||| Sbjct: 971 ttgccaaggcaacaggagcgacaat 995
>gb|AC157823.2| Mus musculus BAC clone RP23-382L21 from chromosome 12, complete sequence Length = 203726 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 209 agggaatctgacataacaaaggagcgaat 237 |||||||||||||||||| |||| ||||| Sbjct: 66010 agggaatctgacataacacaggaacgaat 66038
>gb|AF252801.1|AF252801 Drosophila simulans strain sim8 t-complex polypeptide 1 (T-cp1) gene, partial cds Length = 1201 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 303 tgaagtactttgttgaggctggagc 327 |||||||||| |||||||||||||| Sbjct: 374 tgaagtacttcgttgaggctggagc 398
>gb|AF252800.1|AF252800 Drosophila simulans strain sim7 t-complex polypeptide 1 (T-cp1) gene, partial cds Length = 1201 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 303 tgaagtactttgttgaggctggagc 327 |||||||||| |||||||||||||| Sbjct: 374 tgaagtacttcgttgaggctggagc 398
>gb|AF252799.1|AF252799 Drosophila simulans strain sim6 t-complex polypeptide 1 (T-cp1) gene, partial cds Length = 1201 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 303 tgaagtactttgttgaggctggagc 327 |||||||||| |||||||||||||| Sbjct: 374 tgaagtacttcgttgaggctggagc 398
>gb|AF252798.1|AF252798 Drosophila simulans strain sim5 t-complex polypeptide 1 (T-cp1) gene, partial cds Length = 1201 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 303 tgaagtactttgttgaggctggagc 327 |||||||||| |||||||||||||| Sbjct: 374 tgaagtacttcgttgaggctggagc 398
>gb|AF252797.1|AF252797 Drosophila simulans strain sim4 t-complex polypeptide 1 (T-cp1) gene, partial cds Length = 1201 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 303 tgaagtactttgttgaggctggagc 327 |||||||||| |||||||||||||| Sbjct: 374 tgaagtacttcgttgaggctggagc 398
>gb|AF252796.1|AF252796 Drosophila simulans strain sim3 t-complex polypeptide 1 (T-cp1) gene, partial cds Length = 1201 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 303 tgaagtactttgttgaggctggagc 327 |||||||||| |||||||||||||| Sbjct: 374 tgaagtacttcgttgaggctggagc 398
>gb|AF252795.1|AF252795 Drosophila simulans strain sim2 t-complex polypeptide 1 (T-cp1) gene, partial cds Length = 1201 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 303 tgaagtactttgttgaggctggagc 327 |||||||||| |||||||||||||| Sbjct: 374 tgaagtacttcgttgaggctggagc 398
>gb|AF252794.1|AF252794 Drosophila simulans strain sim1 t-complex polypeptide 1 (T-cp1) gene, partial cds Length = 1201 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 303 tgaagtactttgttgaggctggagc 327 |||||||||| |||||||||||||| Sbjct: 374 tgaagtacttcgttgaggctggagc 398
>gb|AF255324.1|AF255324 Drosophila simulans t-complex polypeptide 1 (T-cp1) gene, partial cds Length = 1201 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 303 tgaagtactttgttgaggctggagc 327 |||||||||| |||||||||||||| Sbjct: 374 tgaagtacttcgttgaggctggagc 398
>gb|AY891879.1| Synthetic construct Homo sapiens clone FLH015483.01L t-complex 1 (TCP1) mRNA, partial cds Length = 1671 Score = 42.1 bits (21), Expect = 2.3 Identities = 36/41 (87%) Strand = Plus / Plus Query: 284 ggaattgatgatatgtcattgaagtactttgttgaggctgg 324 |||||||||||||||| ||||||| ||||| |||||||| Sbjct: 871 ggaattgatgatatgtgtctgaagtattttgtggaggctgg 911
>gb|AY891878.1| Synthetic construct Homo sapiens clone FLH015482.01L t-complex 1 (TCP1) mRNA, partial cds Length = 1671 Score = 42.1 bits (21), Expect = 2.3 Identities = 36/41 (87%) Strand = Plus / Plus Query: 284 ggaattgatgatatgtcattgaagtactttgttgaggctgg 324 |||||||||||||||| ||||||| ||||| |||||||| Sbjct: 871 ggaattgatgatatgtgtctgaagtattttgtggaggctgg 911
>gb|AY889392.1| Synthetic construct Homo sapiens clone FLH015487.01X t-complex 1 (TCP1) mRNA, complete cds Length = 1671 Score = 42.1 bits (21), Expect = 2.3 Identities = 36/41 (87%) Strand = Plus / Plus Query: 284 ggaattgatgatatgtcattgaagtactttgttgaggctgg 324 |||||||||||||||| ||||||| ||||| |||||||| Sbjct: 871 ggaattgatgatatgtgtctgaagtattttgtggaggctgg 911
>gb|AY889391.1| Synthetic construct Homo sapiens clone FLH015486.01X t-complex 1 (TCP1) mRNA, complete cds Length = 1671 Score = 42.1 bits (21), Expect = 2.3 Identities = 36/41 (87%) Strand = Plus / Plus Query: 284 ggaattgatgatatgtcattgaagtactttgttgaggctgg 324 |||||||||||||||| ||||||| ||||| |||||||| Sbjct: 871 ggaattgatgatatgtgtctgaagtattttgtggaggctgg 911
>gb|AE003739.3| Drosophila melanogaster chromosome 3R, section 77 of 118 of the complete sequence Length = 224856 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 303 tgaagtactttgttgaggctggagc 327 |||||||||| |||||||||||||| Sbjct: 69073 tgaagtacttcgttgaggctggagc 69049
>emb|AL627312.12| Mouse DNA sequence from clone RP23-276H1 on chromosome 11, complete sequence Length = 178178 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 412 catggagggtgaagaaacatt 432 ||||||||||||||||||||| Sbjct: 48491 catggagggtgaagaaacatt 48471
>gb|BC000665.1| Homo sapiens t-complex 1, transcript variant 1, mRNA (cDNA clone MGC:2234 IMAGE:3349237), complete cds Length = 1919 Score = 42.1 bits (21), Expect = 2.3 Identities = 36/41 (87%) Strand = Plus / Plus Query: 284 ggaattgatgatatgtcattgaagtactttgttgaggctgg 324 |||||||||||||||| ||||||| ||||| |||||||| Sbjct: 996 ggaattgatgatatgtgtctgaagtattttgtggaggctgg 1036
>gb|M21159.1|DROTCP1 D.melanogaster T complex protein 1 (Tcp-1) mRNA, complete cds Length = 1928 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 303 tgaagtactttgttgaggctggagc 327 |||||||||| |||||||||||||| Sbjct: 941 tgaagtacttcgttgaggctggagc 965
>dbj|AP002340.3| Homo sapiens genomic DNA, chromosome 11q, clone:CTD-2011F17, complete sequence Length = 165747 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 180 atccaagggaactggagaaga 200 ||||||||||||||||||||| Sbjct: 141363 atccaagggaactggagaaga 141383
>emb|AL627386.8| Mouse DNA sequence from clone RP23-278A10 on chromosome X, complete sequence Length = 93010 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 632 acggtagttgctggtggtggtgctg 656 |||||||||| |||||||||||||| Sbjct: 39271 acggtagttggtggtggtggtgctg 39295
>gb|AC108759.2| Oryza sativa (Japonica cultiva-group) chromosome 9 BAC clone OSJNBa0072P02, complete sequence Length = 157488 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 455 gccgacgaggtcgttgagga 474 |||||||||||||||||||| Sbjct: 44100 gccgacgaggtcgttgagga 44119
>gb|AC159452.1| Trypanosoma brucei chromosome 5 clone RPCI93-5K5, complete sequence Length = 158740 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 263 aatgttgtatttaccaccaa 282 |||||||||||||||||||| Sbjct: 84388 aatgttgtatttaccaccaa 84407
>gb|AC108753.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone OSJNBa0010B06, complete sequence Length = 129310 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 455 gccgacgaggtcgttgagga 474 |||||||||||||||||||| Sbjct: 108090 gccgacgaggtcgttgagga 108109
>gb|BC003809.1| Mus musculus t-complex protein 1, mRNA (cDNA clone MGC:6094 IMAGE:3599670), complete cds Length = 1851 Score = 40.1 bits (20), Expect = 9.2 Identities = 35/40 (87%) Strand = Plus / Plus Query: 112 aattgcttgtcttgatttcaaccttcagaagacgaaaatg 151 ||||||||||||||| |||| ||| ||||| || |||||| Sbjct: 784 aattgcttgtcttgacttcagcctgcagaaaacaaaaatg 823
>ref|NM_013686.1| Mus musculus t-complex protein 1 (Tcp1), mRNA Length = 1812 Score = 40.1 bits (20), Expect = 9.2 Identities = 35/40 (87%) Strand = Plus / Plus Query: 112 aattgcttgtcttgatttcaaccttcagaagacgaaaatg 151 ||||||||||||||| |||| ||| ||||| || |||||| Sbjct: 751 aattgcttgtcttgacttcagcctgcagaaaacaaaaatg 790
>ref|XM_654252.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN1740.2), mRNA Length = 942 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 609 tgaagagaactttggaatcc 628 |||||||||||||||||||| Sbjct: 909 tgaagagaactttggaatcc 890
>gb|AC125781.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0058G18, complete sequence Length = 175397 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 429 catttgatccttcctttctt 448 |||||||||||||||||||| Sbjct: 77476 catttgatccttcctttctt 77457
>ref|NM_001032972.1| Monodelphis domestica t-complex polypeptide 1 (TCP1), mRNA Length = 1879 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 644 ggtggtggtgctgtagaagc 663 |||||||||||||||||||| Sbjct: 1291 ggtggtggtgctgtagaagc 1310 Score = 40.1 bits (20), Expect = 9.2 Identities = 32/36 (88%) Strand = Plus / Plus Query: 284 ggaattgatgatatgtcattgaagtactttgttgag 319 ||||| |||||||||| ||||||||||||||||| Sbjct: 931 ggaatagatgatatgtgtctgaagtactttgttgag 966
>gb|AC137751.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0014E11, complete sequence Length = 199348 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 429 catttgatccttcctttctt 448 |||||||||||||||||||| Sbjct: 18490 catttgatccttcctttctt 18471
>ref|XM_445469.1| Candida glabrata CBS138, CAGL0D01254g partial mRNA Length = 684 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 632 acggtagttgctggtggtgg 651 |||||||||||||||||||| Sbjct: 534 acggtagttgctggtggtgg 515
>gb|AC002287.1|HUAC002287 Homo sapiens Chromosome 16 BAC clone CIT987-SKA-237H1 ~complete genomic sequence, complete sequence Length = 188636 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 637 agttgctggtggtggtgctg 656 |||||||||||||||||||| Sbjct: 26019 agttgctggtggtggtgctg 26038
>gb|AC137605.3| Mus musculus BAC clone RP23-117H14 from 19, complete sequence Length = 180560 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 635 gtagttgctggtggtggtgc 654 |||||||||||||||||||| Sbjct: 3406 gtagttgctggtggtggtgc 3387
>gb|AC127172.13| Mus musculus strain C57BL/6J clone rp23-387d2 map 17, complete sequence Length = 203077 Score = 40.1 bits (20), Expect = 9.2 Identities = 35/40 (87%) Strand = Plus / Plus Query: 112 aattgcttgtcttgatttcaaccttcagaagacgaaaatg 151 ||||||||||||||| |||| ||| ||||| || |||||| Sbjct: 87720 aattgcttgtcttgacttcagcctgcagaaaacaaaaatg 87759
>gb|AC158532.2| Mus musculus BAC clone RP23-178C22 from chromosome 14, complete sequence Length = 188421 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 17 ggtaaaagtgccaaggaaag 36 |||||||||||||||||||| Sbjct: 69053 ggtaaaagtgccaaggaaag 69034
>gb|DQ168848.1| Pseudomonas cichorii strain 83-1 pathogenicity island, partial sequence Length = 55569 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 638 gttgctggtggtggtgctgt 657 |||||||||||||||||||| Sbjct: 18251 gttgctggtggtggtgctgt 18270
>emb|CR380950.1| Candida glabrata strain CBS138 chromosome D complete sequence Length = 651701 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 632 acggtagttgctggtggtgg 651 |||||||||||||||||||| Sbjct: 140888 acggtagttgctggtggtgg 140869
>emb|AJ426459.1|MCH426459 Methylobacterium chloromethanicum deoA gene (partial), deoC gene, xapA gene, cdd gene, ORF1, lpxK gene and waaA gene (partial), strain CM4 Length = 5281 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 448 tggacatgccgacgaggtcg 467 |||||||||||||||||||| Sbjct: 1522 tggacatgccgacgaggtcg 1541
>gb|AC087482.9| Homo sapiens chromosome 15, clone RP11-540N15, complete sequence Length = 194546 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 504 tgaaaggcacaaagaacaca 523 |||||||||||||||||||| Sbjct: 47075 tgaaaggcacaaagaacaca 47056
>emb|AL773517.4| Mouse DNA sequence from clone RP24-170J19 on chromosome 4 Contains a t-complex protein 1 (Tcp1) pseudogene, complete sequence Length = 167940 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 112 aattgcttgtcttgatttca 131 |||||||||||||||||||| Sbjct: 37373 aattgcttgtcttgatttca 37354
>emb|AJ605528.1| Pseudomonas fluorescens bv. V hrcR gene (partial), hrcS gene and hrcT gene (partial), strain CFBP 11362 Length = 879 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 638 gttgctggtggtggtgctgt 657 |||||||||||||||||||| Sbjct: 188 gttgctggtggtggtgctgt 207
>emb|AJ605520.1| Pseudomonas fluorescens bv. I hrcR gene (partial), hrcS gene and hrcT gene (partial), strain CFBP 11345 Length = 891 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 638 gttgctggtggtggtgctgt 657 |||||||||||||||||||| Sbjct: 202 gttgctggtggtggtgctgt 221
>dbj|AK151068.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830022H06 product:t-complex protein 1, full insert sequence Length = 1853 Score = 40.1 bits (20), Expect = 9.2 Identities = 35/40 (87%) Strand = Plus / Plus Query: 112 aattgcttgtcttgatttcaaccttcagaagacgaaaatg 151 ||||||||||||||| |||| ||| ||||| || |||||| Sbjct: 801 aattgcttgtcttgacttcagcctgcagaaaacaaaaatg 840
>dbj|AK153037.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830119L09 product:t-complex protein 1, full insert sequence Length = 1853 Score = 40.1 bits (20), Expect = 9.2 Identities = 35/40 (87%) Strand = Plus / Plus Query: 112 aattgcttgtcttgatttcaaccttcagaagacgaaaatg 151 ||||||||||||||| |||| ||| ||||| || |||||| Sbjct: 802 aattgcttgtcttgacttcagcctgcagaaaacaaaaatg 841
>dbj|AK150744.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830014M07 product:t-complex protein 1, full insert sequence Length = 3419 Score = 40.1 bits (20), Expect = 9.2 Identities = 35/40 (87%) Strand = Plus / Plus Query: 112 aattgcttgtcttgatttcaaccttcagaagacgaaaatg 151 ||||||||||||||| |||| ||| ||||| || |||||| Sbjct: 2361 aattgcttgtcttgacttcagcctgcagaaaacaaaaatg 2400
>dbj|AK151903.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830042H02 product:t-complex protein 1, full insert sequence Length = 3419 Score = 40.1 bits (20), Expect = 9.2 Identities = 35/40 (87%) Strand = Plus / Plus Query: 112 aattgcttgtcttgatttcaaccttcagaagacgaaaatg 151 ||||||||||||||| |||| ||| ||||| || |||||| Sbjct: 2361 aattgcttgtcttgacttcagcctgcagaaaacaaaaatg 2400
>dbj|AK149755.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:G530015C19 product:t-complex protein 1, full insert sequence Length = 1854 Score = 40.1 bits (20), Expect = 9.2 Identities = 35/40 (87%) Strand = Plus / Plus Query: 112 aattgcttgtcttgatttcaaccttcagaagacgaaaatg 151 ||||||||||||||| |||| ||| ||||| || |||||| Sbjct: 802 aattgcttgtcttgacttcagcctgcagaaaacaaaaatg 841
>gb|AF292566.1|AF292566 Pseudomonas fluorescens RspL (rspL), RspO (rspO), RspP (rspP), RscQA (rscQA), RscQB (rscQB), RscR (rscR), RscS (rscS), RscT (rscT), RscU (rscU), RspV (rspV), RspT (rspT), RscC (rscC), RspG (rspG), RspF (rspF), RspE (rspE), RspD (rspD), RscJ (rscJ), RspB (rspB), RspA (rspA), RspR (rspR), and putative GTP-binding protein genes, complete cds; and unknown gene Length = 16371 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 638 gttgctggtggtggtgctgt 657 |||||||||||||||||||| Sbjct: 4295 gttgctggtggtggtgctgt 4314
>dbj|AK149611.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:G530001M14 product:t-complex protein 1, full insert sequence Length = 2364 Score = 40.1 bits (20), Expect = 9.2 Identities = 35/40 (87%) Strand = Plus / Plus Query: 112 aattgcttgtcttgatttcaaccttcagaagacgaaaatg 151 ||||||||||||||| |||| ||| ||||| || |||||| Sbjct: 801 aattgcttgtcttgacttcagcctgcagaaaacaaaaatg 840
>dbj|AK152759.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830083P13 product:t-complex protein 1, full insert sequence Length = 1853 Score = 40.1 bits (20), Expect = 9.2 Identities = 35/40 (87%) Strand = Plus / Plus Query: 112 aattgcttgtcttgatttcaaccttcagaagacgaaaatg 151 ||||||||||||||| |||| ||| ||||| || |||||| Sbjct: 802 aattgcttgtcttgacttcagcctgcagaaaacaaaaatg 841
>dbj|AK150666.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830013G22 product:t-complex protein 1, full insert sequence Length = 3419 Score = 40.1 bits (20), Expect = 9.2 Identities = 35/40 (87%) Strand = Plus / Plus Query: 112 aattgcttgtcttgatttcaaccttcagaagacgaaaatg 151 ||||||||||||||| |||| ||| ||||| || |||||| Sbjct: 2361 aattgcttgtcttgacttcagcctgcagaaaacaaaaatg 2400
>gb|AC093334.4| Homo sapiens chromosome 15, clone RP11-798K3, complete sequence Length = 220807 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 504 tgaaaggcacaaagaacaca 523 |||||||||||||||||||| Sbjct: 67713 tgaaaggcacaaagaacaca 67732
>dbj|AK152641.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830081K16 product:t-complex protein 1, full insert sequence Length = 1844 Score = 40.1 bits (20), Expect = 9.2 Identities = 35/40 (87%) Strand = Plus / Plus Query: 112 aattgcttgtcttgatttcaaccttcagaagacgaaaatg 151 ||||||||||||||| |||| ||| ||||| || |||||| Sbjct: 793 aattgcttgtcttgacttcagcctgcagaaaacaaaaatg 832
>dbj|AK152633.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830081I21 product:t-complex protein 1, full insert sequence Length = 3419 Score = 40.1 bits (20), Expect = 9.2 Identities = 35/40 (87%) Strand = Plus / Plus Query: 112 aattgcttgtcttgatttcaaccttcagaagacgaaaatg 151 ||||||||||||||| |||| ||| ||||| || |||||| Sbjct: 2361 aattgcttgtcttgacttcagcctgcagaaaacaaaaatg 2400
>dbj|AK151445.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830030D15 product:t-complex protein 1, full insert sequence Length = 1792 Score = 40.1 bits (20), Expect = 9.2 Identities = 35/40 (87%) Strand = Plus / Plus Query: 112 aattgcttgtcttgatttcaaccttcagaagacgaaaatg 151 ||||||||||||||| |||| ||| ||||| || |||||| Sbjct: 740 aattgcttgtcttgacttcagcctgcagaaaacaaaaatg 779
>dbj|AK165665.1| Mus musculus RCB-0035 WEHI-3 cDNA, RIKEN full-length enriched library, clone:G430121O08 product:t-complex protein 1, full insert sequence Length = 2267 Score = 40.1 bits (20), Expect = 9.2 Identities = 35/40 (87%) Strand = Plus / Plus Query: 112 aattgcttgtcttgatttcaaccttcagaagacgaaaatg 151 ||||||||||||||| |||| ||| ||||| || |||||| Sbjct: 803 aattgcttgtcttgacttcagcctgcagaaaacaaaaatg 842
>dbj|AK153430.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830160D23 product:t-complex protein 1, full insert sequence Length = 1792 Score = 40.1 bits (20), Expect = 9.2 Identities = 35/40 (87%) Strand = Plus / Plus Query: 112 aattgcttgtcttgatttcaaccttcagaagacgaaaatg 151 ||||||||||||||| |||| ||| ||||| || |||||| Sbjct: 740 aattgcttgtcttgacttcagcctgcagaaaacaaaaatg 779
>dbj|AK167529.1| Mus musculus 14 days pregnant adult female placenta cDNA, RIKEN full-length enriched library, clone:I530018N11 product:t-complex protein 1, full insert sequence Length = 2262 Score = 40.1 bits (20), Expect = 9.2 Identities = 35/40 (87%) Strand = Plus / Plus Query: 112 aattgcttgtcttgatttcaaccttcagaagacgaaaatg 151 ||||||||||||||| |||| ||| ||||| || |||||| Sbjct: 801 aattgcttgtcttgacttcagcctgcagaaaacaaaaatg 840
>emb|BX248234.13| Zebrafish DNA sequence from clone DKEY-13E15 in linkage group 16, complete sequence Length = 220538 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 306 agtactttgttgaggctgga 325 |||||||||||||||||||| Sbjct: 98359 agtactttgttgaggctgga 98340
>dbj|AK166966.1| Mus musculus blastocyst blastocyst cDNA, RIKEN full-length enriched library, clone:I1C0025N07 product:t-complex protein 1, full insert sequence Length = 1874 Score = 40.1 bits (20), Expect = 9.2 Identities = 35/40 (87%) Strand = Plus / Plus Query: 112 aattgcttgtcttgatttcaaccttcagaagacgaaaatg 151 ||||||||||||||| |||| ||| ||||| || |||||| Sbjct: 824 aattgcttgtcttgacttcagcctgcagaaaacaaaaatg 863
>dbj|AK166828.1| Mus musculus blastocyst blastocyst cDNA, RIKEN full-length enriched library, clone:I1C0015J24 product:t-complex protein 1, full insert sequence Length = 1850 Score = 40.1 bits (20), Expect = 9.2 Identities = 35/40 (87%) Strand = Plus / Plus Query: 112 aattgcttgtcttgatttcaaccttcagaagacgaaaatg 151 ||||||||||||||| |||| ||| ||||| || |||||| Sbjct: 800 aattgcttgtcttgacttcagcctgcagaaaacaaaaatg 839
>gb|S46763.1| Tcp-1=t-complex polypeptide 1 [mice, Genomic, 10043 nt] Length = 10043 Score = 40.1 bits (20), Expect = 9.2 Identities = 35/40 (87%) Strand = Plus / Plus Query: 112 aattgcttgtcttgatttcaaccttcagaagacgaaaatg 151 ||||||||||||||| |||| ||| ||||| || |||||| Sbjct: 5370 aattgcttgtcttgacttcagcctgcagaaaacaaaaatg 5409
>ref|NG_001466.1| Mus musculus t-complex protein 1, pseudogene 1 (Tcp1-ps1) on chromosome 4 Length = 1353 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 112 aattgcttgtcttgatttca 131 |||||||||||||||||||| Sbjct: 735 aattgcttgtcttgatttca 754
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 429 catttgatccttcctttctt 448 |||||||||||||||||||| Sbjct: 24889362 catttgatccttcctttctt 24889343
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 455 gccgacgaggtcgttgagga 474 |||||||||||||||||||| Sbjct: 19324874 gccgacgaggtcgttgagga 19324893
>gb|AC130450.3| Homo sapiens chromosome 16 clone CTA-237H1, complete sequence Length = 183842 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 637 agttgctggtggtggtgctg 656 |||||||||||||||||||| Sbjct: 21618 agttgctggtggtggtgctg 21637
>gb|AF343913.1|AF343913 Thermotoga neapolitana transcriptional regulator XylR (xylR) gene, partial cds; and beta-N-acetylglucosaminidase CbsA (cbsA) gene, complete cds Length = 2202 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 477 ggatttctgatgatgaaata 496 |||||||||||||||||||| Sbjct: 2096 ggatttctgatgatgaaata 2077
>gb|AC127459.3| Homo sapiens chromosome 16 clone RP11-20G6, complete sequence Length = 172331 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 637 agttgctggtggtggtgctg 656 |||||||||||||||||||| Sbjct: 128397 agttgctggtggtggtgctg 128416
>gb|AF313410.1|AF313410 Sulfolobus shibatae HSP60 gamma subunit gene, complete cds Length = 2009 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 641 gctggtggtggtgctgtaga 660 |||||||||||||||||||| Sbjct: 1377 gctggtggtggtgctgtaga 1396
>gb|AC090629.8| Homo sapiens 12 BAC RP11-410B16 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 159240 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 490 tgaaataattctagtgaaag 509 |||||||||||||||||||| Sbjct: 85733 tgaaataattctagtgaaag 85714
>ref|XM_575602.1| PREDICTED: Rattus norvegicus similar to T-complex protein 1, alpha subunit (TCP-1-alpha) (CCT-alpha) (LOC500254), mRNA Length = 1881 Score = 40.1 bits (20), Expect = 9.2 Identities = 35/40 (87%) Strand = Plus / Plus Query: 112 aattgcttgtcttgatttcaaccttcagaagacgaaaatg 151 ||||||||||||||| |||| ||| ||||| || |||||| Sbjct: 849 aattgcttgtcttgacttcagcctgcagaaaacaaaaatg 888
>dbj|AK199928.1| Mus musculus cDNA, clone:Y1G0132M23, strand:plus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000007003, based on BLAT search Length = 378 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 546 gaggagcaaatgacttcatg 565 |||||||||||||||||||| Sbjct: 91 gaggagcaaatgacttcatg 110
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 647 ggtggtgctgtagaagctgc 666 |||||||||||||||||||| Sbjct: 529676 ggtggtgctgtagaagctgc 529695
>gb|AF143497.1|AF143497 Monodelphis domestica t-complex polypeptide 1 (TCP1) mRNA, complete cds Length = 1879 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 644 ggtggtggtgctgtagaagc 663 |||||||||||||||||||| Sbjct: 1291 ggtggtggtgctgtagaagc 1310 Score = 40.1 bits (20), Expect = 9.2 Identities = 32/36 (88%) Strand = Plus / Plus Query: 284 ggaattgatgatatgtcattgaagtactttgttgag 319 ||||| |||||||||| ||||||||||||||||| Sbjct: 931 ggaatagatgatatgtgtctgaagtactttgttgag 966
>ref|NM_012670.1| Rattus norvegicus t-complex protein 1 (Tcp1), mRNA Length = 1831 Score = 40.1 bits (20), Expect = 9.2 Identities = 35/40 (87%) Strand = Plus / Plus Query: 112 aattgcttgtcttgatttcaaccttcagaagacgaaaatg 151 ||||||||||||||| |||| ||| ||||| || |||||| Sbjct: 776 aattgcttgtcttgacttcagcctgcagaaaacaaaaatg 815
>dbj|D90345.1|RATTCP1 Rattus norvegicus Tcp-1 mRNA for t complex polypeptide 1, complete cds Length = 1831 Score = 40.1 bits (20), Expect = 9.2 Identities = 35/40 (87%) Strand = Plus / Plus Query: 112 aattgcttgtcttgatttcaaccttcagaagacgaaaatg 151 ||||||||||||||| |||| ||| ||||| || |||||| Sbjct: 776 aattgcttgtcttgacttcagcctgcagaaaacaaaaatg 815
>emb|CR854989.8| Zebrafish DNA sequence from clone DKEY-220M7 in linkage group 16, complete sequence Length = 101111 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 306 agtactttgttgaggctgga 325 |||||||||||||||||||| Sbjct: 78489 agtactttgttgaggctgga 78508
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 429 catttgatccttcctttctt 448 |||||||||||||||||||| Sbjct: 25201032 catttgatccttcctttctt 25201013
>emb|AL591388.9| Zebrafish DNA sequence from clone BUSM1-255P14 in linkage group 7, complete sequence Length = 97239 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 429 catttgatccttcctttctt 448 |||||||||||||||||||| Sbjct: 8747 catttgatccttcctttctt 8766
>emb|CR956402.15| M.truncatula DNA sequence from clone MTH2-50J5 on chromosome 3, complete sequence Length = 142361 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 222 taacaaaggagcgaattgag 241 |||||||||||||||||||| Sbjct: 18098 taacaaaggagcgaattgag 18079
>gb|AC123689.8| Mus musculus chromosome 15, clone RP23-321P10, complete sequence Length = 218071 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 433 tgatccttcctttcttggac 452 |||||||||||||||||||| Sbjct: 194064 tgatccttcctttcttggac 194083
>gb|AC157602.8| Mus musculus chromosome 15 clone RP23-104H10, complete sequence Length = 211648 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 433 tgatccttcctttcttggac 452 |||||||||||||||||||| Sbjct: 133168 tgatccttcctttcttggac 133149
>gb|AC161238.7| Mus musculus chromosome 19, clone RP24-288C19, complete sequence Length = 193445 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 635 gtagttgctggtggtggtgc 654 |||||||||||||||||||| Sbjct: 30325 gtagttgctggtggtggtgc 30344
>emb|AL589878.12| Mouse DNA sequence from clone RP23-351C7 on chromosome 15, complete sequence Length = 203949 Score = 40.1 bits (20), Expect = 9.2 Identities = 35/40 (87%) Strand = Plus / Minus Query: 112 aattgcttgtcttgatttcaaccttcagaagacgaaaatg 151 ||||||||||||||| |||| ||| ||||| || |||||| Sbjct: 115878 aattgcttgtcttgacttcagcctgcagaaaacaaaaatg 115839
>gb|M12899.1|MUSTCPAB Mouse t complex polypeptide 1 (Tcp-1-b) mRNA, complete cds Length = 1809 Score = 40.1 bits (20), Expect = 9.2 Identities = 35/40 (87%) Strand = Plus / Plus Query: 112 aattgcttgtcttgatttcaaccttcagaagacgaaaatg 151 ||||||||||||||| |||| ||| ||||| || |||||| Sbjct: 759 aattgcttgtcttgacttcagcctgcagaaaacaaaaatg 798
>dbj|D00851.1|MUSTCP1PS Mus musculus Tcp-1 pseudogene for t-complex polypeptide 1 Length = 1353 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 112 aattgcttgtcttgatttca 131 |||||||||||||||||||| Sbjct: 735 aattgcttgtcttgatttca 754
>dbj|D10606.1|MUSTCP Mus musculus gene for t-complex polypeptide 1, complete cds Length = 9261 Score = 40.1 bits (20), Expect = 9.2 Identities = 35/40 (87%) Strand = Plus / Plus Query: 112 aattgcttgtcttgatttcaaccttcagaagacgaaaatg 151 ||||||||||||||| |||| ||| ||||| || |||||| Sbjct: 4588 aattgcttgtcttgacttcagcctgcagaaaacaaaaatg 4627
>dbj|D90344.1|MUSTCP1A Mus musculus mRNA for t-complex polypeptide 1A (Tcp-1a), complete cds Length = 1812 Score = 40.1 bits (20), Expect = 9.2 Identities = 35/40 (87%) Strand = Plus / Plus Query: 112 aattgcttgtcttgatttcaaccttcagaagacgaaaatg 151 ||||||||||||||| |||| ||| ||||| || |||||| Sbjct: 751 aattgcttgtcttgacttcagcctgcagaaaacaaaaatg 790 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,811,772 Number of Sequences: 3902068 Number of extensions: 6811772 Number of successful extensions: 133526 Number of sequences better than 10.0: 153 Number of HSP's better than 10.0 without gapping: 152 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 132792 Number of HSP's gapped (non-prelim): 730 length of query: 670 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 647 effective length of database: 17,143,297,704 effective search space: 11091713614488 effective search space used: 11091713614488 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
