ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags18c14 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK106179.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-208-C11, full insert sequence Length = 1362 Score = 218 bits (110), Expect = 2e-53 Identities = 299/362 (82%) Strand = Plus / Plus Query: 40 ctgactgactgctgcggtggcgatggtacgacggcgagggccctcgtcaaggcttatccg 99 ||||| ||||||||||| ||||| || ||||||||||||||| ||| |||||| || || Sbjct: 672 ctgaccgactgctgcggcggcgacggcacgacggcgagggccatcgccaaggcctaccct 731 Query: 100 cacatcaagtgcaccgtgttggaccttccgaaggtgatcgacaaagccccaaaggatggt 159 || |||||||||| ||| |||||||||| |||||||||||||| || || || |||||| Sbjct: 732 catgtcaagtgcactgtgctggaccttcccaaggtgatcgacaaggcgcccaatgatggt 791 Query: 160 gtcgttaactatgtagcgggtgacctgttccacaccgtcccatcttctcaagccgtcatg 219 |||||||||||||| || |||||| ||||||||||||| ||| | |||||||||| ||| Sbjct: 792 gtcgttaactatgttgcaggtgacttgttccacaccgtgccaccggctcaagccgtgatg 851 Query: 220 cttaagcttgtgctacacttttggagcgatgaggattgcgtgaaaatcttaacccagtgc 279 || |||||||| | ||| ||||||||||| ||||||||||| ||||| || |||||| Sbjct: 852 ctcaagcttgtattgcaccactggagcgatgatgattgcgtgaagatcttgactcagtgc 911 Query: 280 aagaaggccattcctccgcacgacgagggaggaaagataattatcatagacattgtgatt 339 | ||||||||||| | | || |||||||| ||| | || |||||||| || || || Sbjct: 912 agaaaggccattccatcacgagaggagggagggaaggtcatcatcatagagatactggtt 971 Query: 340 ggaccatccttagggccaataatgtttgaagcccaactcctgatggatatgctcatgatg 399 ||||| || |||| ||| |||||||||||||||| || ||||||||||||| ||| || Sbjct: 972 ggaccttcactaggaccagtaatgtttgaagcccagctgatgatggatatgctgatgttg 1031 Query: 400 gt 401 || Sbjct: 1032 gt 1033
>dbj|AK059770.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-H05, full insert sequence Length = 1264 Score = 218 bits (110), Expect = 2e-53 Identities = 299/362 (82%) Strand = Plus / Plus Query: 40 ctgactgactgctgcggtggcgatggtacgacggcgagggccctcgtcaaggcttatccg 99 ||||| ||||||||||| ||||| || ||||||||||||||| ||| |||||| || || Sbjct: 677 ctgaccgactgctgcggcggcgacggcacgacggcgagggccatcgccaaggcctaccct 736 Query: 100 cacatcaagtgcaccgtgttggaccttccgaaggtgatcgacaaagccccaaaggatggt 159 || |||||||||| ||| |||||||||| |||||||||||||| || || || |||||| Sbjct: 737 catgtcaagtgcactgtgctggaccttcccaaggtgatcgacaaggcgcccaatgatggt 796 Query: 160 gtcgttaactatgtagcgggtgacctgttccacaccgtcccatcttctcaagccgtcatg 219 |||||||||||||| || |||||| ||||||||||||| ||| | |||||||||| ||| Sbjct: 797 gtcgttaactatgttgcaggtgacttgttccacaccgtgccaccggctcaagccgtgatg 856 Query: 220 cttaagcttgtgctacacttttggagcgatgaggattgcgtgaaaatcttaacccagtgc 279 || |||||||| | ||| ||||||||||| ||||||||||| ||||| || |||||| Sbjct: 857 ctcaagcttgtattgcaccactggagcgatgatgattgcgtgaagatcttgactcagtgc 916 Query: 280 aagaaggccattcctccgcacgacgagggaggaaagataattatcatagacattgtgatt 339 | ||||||||||| | | || |||||||| ||| | || |||||||| || || || Sbjct: 917 agaaaggccattccatcacgagaggagggagggaaggtcatcatcatagagatactggtt 976 Query: 340 ggaccatccttagggccaataatgtttgaagcccaactcctgatggatatgctcatgatg 399 ||||| || |||| ||| |||||||||||||||| || ||||||||||||| ||| || Sbjct: 977 ggaccttcactaggaccagtaatgtttgaagcccagctgatgatggatatgctgatgttg 1036 Query: 400 gt 401 || Sbjct: 1037 gt 1038
>gb|BT009571.1| Triticum aestivum clone wre1n.pk0021.e3:fis, full insert mRNA sequence Length = 770 Score = 184 bits (93), Expect = 2e-43 Identities = 207/245 (84%) Strand = Plus / Plus Query: 46 gactgctgcggtggcgatggtacgacggcgagggccctcgtcaaggcttatccgcacatc 105 |||||||| ||||| ||||| ||||| || |||||| |||||||||| | ||||| ||| Sbjct: 36 gactgctgtggtggtgatgggacgaccgcaagggccatcgtcaaggccttcccgcatatc 95 Query: 106 aagtgcaccgtgttggaccttccgaaggtgatcgacaaagccccaaaggatggtgtcgtt 165 ||||||| |||||||||||||| ||||||||||| |||| ||||| |||||||| ||| Sbjct: 96 aagtgcaatgtgttggaccttccaaaggtgatcgagaaagtcccaagtgatggtgttgtt 155 Query: 166 aactatgtagcgggtgacctgttccacaccgtcccatcttctcaagccgtcatgcttaag 225 |||||||| || |||||||| ||||| ||||||||| | |||| ||||||||||| ||| Sbjct: 156 aactatgtcgctggtgacctcttccataccgtcccaccagctcaggccgtcatgctcaag 215 Query: 226 cttgtgctacacttttggagcgatgaggattgcgtgaaaatcttaacccagtgcaagaag 285 ||||| |||||||| |||||||| ||||||||| | || ||| | | || ||||||||| Sbjct: 216 cttgttctacacttctggagcgacgaggattgcatcaagatcctcgctcaatgcaagaag 275 Query: 286 gccat 290 ||||| Sbjct: 276 gccat 280
>gb|AC138195.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0005P21, complete sequence Length = 147381 Score = 155 bits (78), Expect = 2e-34 Identities = 156/182 (85%) Strand = Plus / Plus Query: 40 ctgactgactgctgcggtggcgatggtacgacggcgagggccctcgtcaaggcttatccg 99 ||||| ||||||||||| ||||| || ||||||||||||||| ||| |||||| || || Sbjct: 119512 ctgaccgactgctgcggcggcgacggcacgacggcgagggccatcgccaaggcctaccct 119571 Query: 100 cacatcaagtgcaccgtgttggaccttccgaaggtgatcgacaaagccccaaaggatggt 159 || |||||||||| ||| |||||||||| |||||||||||||| || || || |||||| Sbjct: 119572 catgtcaagtgcactgtgctggaccttcccaaggtgatcgacaaggcgcccaatgatggt 119631 Query: 160 gtcgttaactatgtagcgggtgacctgttccacaccgtcccatcttctcaagccgtcatg 219 |||||||||||||| || |||||| ||||||||||||| ||| | |||||||||| ||| Sbjct: 119632 gtcgttaactatgttgcaggtgacttgttccacaccgtgccaccggctcaagccgtgatg 119691 Query: 220 ct 221 || Sbjct: 119692 ct 119693 Score = 81.8 bits (41), Expect = 2e-12 Identities = 131/161 (81%) Strand = Plus / Plus Query: 241 tggagcgatgaggattgcgtgaaaatcttaacccagtgcaagaaggccattcctccgcac 300 ||||||||||| ||||||||||| ||||| || ||||||| ||||||||||| | | Sbjct: 122880 tggagcgatgatgattgcgtgaagatcttgactcagtgcagaaaggccattccatcacga 122939 Query: 301 gacgagggaggaaagataattatcatagacattgtgattggaccatccttagggccaata 360 || |||||||| ||| | || |||||||| || || ||||||| || |||| ||| || Sbjct: 122940 gaggagggagggaaggtcatcatcatagagatactggttggaccttcactaggaccagta 122999 Query: 361 atgtttgaagcccaactcctgatggatatgctcatgatggt 401 |||||||||||||| || ||||||||||||| ||| |||| Sbjct: 123000 atgtttgaagcccagctgatgatggatatgctgatgttggt 123040 Score = 77.8 bits (39), Expect = 4e-11 Identities = 54/59 (91%) Strand = Plus / Plus Query: 70 acggcgagggccctcgtcaaggcttatccgcacatcaagtgcaccgtgttggaccttcc 128 |||||||||||| |||||||||| || ||||||||||||||||| ||| |||||||||| Sbjct: 63843 acggcgagggccatcgtcaaggcgtacccgcacatcaagtgcacggtgctggaccttcc 63901 Score = 56.0 bits (28), Expect = 1e-04 Identities = 127/160 (79%) Strand = Plus / Plus Query: 342 accatccttagggccaataatgtttgaagcccaactcctgatggatatgctcatgatggt 401 |||||| || ||||| ||||||| ||||| || ||| ||||||| |||||||||||||| Sbjct: 64295 accatctttggggcctgtaatgttcgaagcgcagctcatgatggacatgctcatgatggt 64354 Query: 402 gacaacaagaggggtccaacggagtgaaaatgactggcgcaagctattcatggaagcagg 461 || || ||||| ||||||| |||||||| |||| | || |||||| |||||| Sbjct: 64355 gaatactagaggtcgtcaacggaacgaaaatgattggcatgacctgttcatgacagcagg 64414 Query: 462 gttcaaagactataaaattgtgaggaaactgggagctcga 501 |||| |||||||| ||||||| |||||| || |||||| Sbjct: 64415 attcagtgactataagattgtgaagaaacttggtgctcga 64454 Score = 52.0 bits (26), Expect = 0.002 Identities = 77/94 (81%) Strand = Plus / Minus Query: 46 gactgctgcggtggcgatggtacgacggcgagggccctcgtcaaggcttatccgcacatc 105 |||||| |||| ||||| || || ||||||||||| |||||| ||| | ||| ||| Sbjct: 130903 gactgcggcggaggcgacggcgcggcggcgagggccatcgtcagggcattcccgggaatc 130844 Query: 106 aagtgcaccgtgttggaccttccgaaggtgatcg 139 |||||||||||| |||||||||| ||||||||| Sbjct: 130843 aagtgcaccgtgctggaccttcctcaggtgatcg 130810
>gb|AC135793.4| Oryza sativa chromosome 11 BAC clone OSJNBb0017P15, complete sequence Length = 128418 Score = 155 bits (78), Expect = 2e-34 Identities = 156/182 (85%) Strand = Plus / Plus Query: 40 ctgactgactgctgcggtggcgatggtacgacggcgagggccctcgtcaaggcttatccg 99 ||||| ||||||||||| ||||| || ||||||||||||||| ||| |||||| || || Sbjct: 5261 ctgaccgactgctgcggcggcgacggcacgacggcgagggccatcgccaaggcctaccct 5320 Query: 100 cacatcaagtgcaccgtgttggaccttccgaaggtgatcgacaaagccccaaaggatggt 159 || |||||||||| ||| |||||||||| |||||||||||||| || || || |||||| Sbjct: 5321 catgtcaagtgcactgtgctggaccttcccaaggtgatcgacaaggcgcccaatgatggt 5380 Query: 160 gtcgttaactatgtagcgggtgacctgttccacaccgtcccatcttctcaagccgtcatg 219 |||||||||||||| || |||||| ||||||||||||| ||| | |||||||||| ||| Sbjct: 5381 gtcgttaactatgttgcaggtgacttgttccacaccgtgccaccggctcaagccgtgatg 5440 Query: 220 ct 221 || Sbjct: 5441 ct 5442 Score = 81.8 bits (41), Expect = 2e-12 Identities = 131/161 (81%) Strand = Plus / Plus Query: 241 tggagcgatgaggattgcgtgaaaatcttaacccagtgcaagaaggccattcctccgcac 300 ||||||||||| ||||||||||| ||||| || ||||||| ||||||||||| | | Sbjct: 8629 tggagcgatgatgattgcgtgaagatcttgactcagtgcagaaaggccattccatcacga 8688 Query: 301 gacgagggaggaaagataattatcatagacattgtgattggaccatccttagggccaata 360 || |||||||| ||| | || |||||||| || || ||||||| || |||| ||| || Sbjct: 8689 gaggagggagggaaggtcatcatcatagagatactggttggaccttcactaggaccagta 8748 Query: 361 atgtttgaagcccaactcctgatggatatgctcatgatggt 401 |||||||||||||| || ||||||||||||| ||| |||| Sbjct: 8749 atgtttgaagcccagctgatgatggatatgctgatgttggt 8789 Score = 61.9 bits (31), Expect = 2e-06 Identities = 85/103 (82%) Strand = Plus / Plus Query: 26 aggggctcgagtccctgactgactgctgcggtggcgatggtacgacggcgagggccctcg 85 ||||||| ||||| ||||| |||||| |||| ||||| || ||||||||||| || ||| Sbjct: 60504 aggggctggagtcgctgacagactgcggcggcggcgacggcgcgacggcgaggaccatcg 60563 Query: 86 tcaaggcttatccgcacatcaagtgcaccgtgttggaccttcc 128 || |||| | || ||| |||||||||| ||| |||||||||| Sbjct: 60564 tcgaggccttcccacacgtcaagtgcactgtgctggaccttcc 60606 Score = 52.0 bits (26), Expect = 0.002 Identities = 77/94 (81%) Strand = Plus / Minus Query: 46 gactgctgcggtggcgatggtacgacggcgagggccctcgtcaaggcttatccgcacatc 105 |||||| |||| ||||| || || ||||||||||| |||||| ||| | ||| ||| Sbjct: 16652 gactgcggcggaggcgacggcgcggcggcgagggccatcgtcagggcattcccgggaatc 16593 Query: 106 aagtgcaccgtgttggaccttccgaaggtgatcg 139 |||||||||||| |||||||||| ||||||||| Sbjct: 16592 aagtgcaccgtgctggaccttcctcaggtgatcg 16559
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 155 bits (78), Expect = 2e-34 Identities = 156/182 (85%) Strand = Plus / Minus Query: 40 ctgactgactgctgcggtggcgatggtacgacggcgagggccctcgtcaaggcttatccg 99 ||||| ||||||||||| ||||| || ||||||||||||||| ||| |||||| || || Sbjct: 11494276 ctgaccgactgctgcggcggcgacggcacgacggcgagggccatcgccaaggcctaccct 11494217 Query: 100 cacatcaagtgcaccgtgttggaccttccgaaggtgatcgacaaagccccaaaggatggt 159 || |||||||||| ||| |||||||||| |||||||||||||| || || || |||||| Sbjct: 11494216 catgtcaagtgcactgtgctggaccttcccaaggtgatcgacaaggcgcccaatgatggt 11494157 Query: 160 gtcgttaactatgtagcgggtgacctgttccacaccgtcccatcttctcaagccgtcatg 219 |||||||||||||| || |||||| ||||||||||||| ||| | |||||||||| ||| Sbjct: 11494156 gtcgttaactatgttgcaggtgacttgttccacaccgtgccaccggctcaagccgtgatg 11494097 Query: 220 ct 221 || Sbjct: 11494096 ct 11494095 Score = 81.8 bits (41), Expect = 2e-12 Identities = 131/161 (81%) Strand = Plus / Minus Query: 241 tggagcgatgaggattgcgtgaaaatcttaacccagtgcaagaaggccattcctccgcac 300 ||||||||||| ||||||||||| ||||| || ||||||| ||||||||||| | | Sbjct: 11490908 tggagcgatgatgattgcgtgaagatcttgactcagtgcagaaaggccattccatcacga 11490849 Query: 301 gacgagggaggaaagataattatcatagacattgtgattggaccatccttagggccaata 360 || |||||||| ||| | || |||||||| || || ||||||| || |||| ||| || Sbjct: 11490848 gaggagggagggaaggtcatcatcatagagatactggttggaccttcactaggaccagta 11490789 Query: 361 atgtttgaagcccaactcctgatggatatgctcatgatggt 401 |||||||||||||| || ||||||||||||| ||| |||| Sbjct: 11490788 atgtttgaagcccagctgatgatggatatgctgatgttggt 11490748 Score = 77.8 bits (39), Expect = 4e-11 Identities = 54/59 (91%) Strand = Plus / Minus Query: 70 acggcgagggccctcgtcaaggcttatccgcacatcaagtgcaccgtgttggaccttcc 128 |||||||||||| |||||||||| || ||||||||||||||||| ||| |||||||||| Sbjct: 11549945 acggcgagggccatcgtcaaggcgtacccgcacatcaagtgcacggtgctggaccttcc 11549887 Score = 71.9 bits (36), Expect = 2e-09 Identities = 66/76 (86%) Strand = Plus / Minus Query: 68 cgacggcgagggccctcgtcaaggcttatccgcacatcaagtgcaccgtgttggaccttc 127 |||||||||||||| ||| | ||| | ||||||||||||||||| ||| ||||||| | Sbjct: 7138367 cgacggcgagggccatcgccgcggcattcccgcacatcaagtgcacggtgctggacctcc 7138308 Query: 128 cgaaggtgatcgacaa 143 |||||||||||||||| Sbjct: 7138307 cgaaggtgatcgacaa 7138292 Score = 63.9 bits (32), Expect = 5e-07 Identities = 59/68 (86%) Strand = Plus / Minus Query: 154 gatggtgtcgttaactatgtagcgggtgacctgttccacaccgtcccatcttctcaagcc 213 |||||||| || |||||||||||||||||| |||||| | || ||||| || ||||||| Sbjct: 11330944 gatggtgtggtgaactatgtagcgggtgacatgttccgcgccatcccacctgctcaagct 11330885 Query: 214 gtcatgct 221 |||||||| Sbjct: 11330884 gtcatgct 11330877 Score = 61.9 bits (31), Expect = 2e-06 Identities = 85/103 (82%) Strand = Plus / Minus Query: 26 aggggctcgagtccctgactgactgctgcggtggcgatggtacgacggcgagggccctcg 85 ||||||| ||||| ||||| |||||| |||| ||||| || ||||||||||| || ||| Sbjct: 11439033 aggggctggagtcgctgacagactgcggcggcggcgacggcgcgacggcgaggaccatcg 11438974 Query: 86 tcaaggcttatccgcacatcaagtgcaccgtgttggaccttcc 128 || |||| | || ||| |||||||||| ||| |||||||||| Sbjct: 11438973 tcgaggccttcccacacgtcaagtgcactgtgctggaccttcc 11438931 Score = 60.0 bits (30), Expect = 9e-06 Identities = 60/70 (85%) Strand = Plus / Minus Query: 455 aagcagggttcaaagactataaaattgtgaggaaactgggagctcgatgcgttatcgagg 514 ||||||| |||| ||||| || ||||||| |||||||||||||||| |||| | |||| Sbjct: 11353955 aagcaggcttcagtgactacaatattgtgaagaaactgggagctcgaggcgtctttgagg 11353896 Query: 515 tctacccata 524 |||||||||| Sbjct: 11353895 tctacccata 11353886 Score = 56.0 bits (28), Expect = 1e-04 Identities = 127/160 (79%) Strand = Plus / Minus Query: 342 accatccttagggccaataatgtttgaagcccaactcctgatggatatgctcatgatggt 401 |||||| || ||||| ||||||| ||||| || ||| ||||||| |||||||||||||| Sbjct: 11549493 accatctttggggcctgtaatgttcgaagcgcagctcatgatggacatgctcatgatggt 11549434 Query: 402 gacaacaagaggggtccaacggagtgaaaatgactggcgcaagctattcatggaagcagg 461 || || ||||| ||||||| |||||||| |||| | || |||||| |||||| Sbjct: 11549433 gaatactagaggtcgtcaacggaacgaaaatgattggcatgacctgttcatgacagcagg 11549374 Query: 462 gttcaaagactataaaattgtgaggaaactgggagctcga 501 |||| |||||||| ||||||| |||||| || |||||| Sbjct: 11549373 attcagtgactataagattgtgaagaaacttggtgctcga 11549334 Score = 54.0 bits (27), Expect = 5e-04 Identities = 57/67 (85%) Strand = Plus / Minus Query: 224 agcttgtgctacacttttggagcgatgaggattgcgtgaaaatcttaacccagtgcaaga 283 ||||||| || || |||||||||||||| || |||||||| ||| | |||||||||||| Sbjct: 7137826 agcttgtactgcatttttggagcgatgacgactgcgtgaagatcctgtcccagtgcaaga 7137767 Query: 284 aggccat 290 | ||||| Sbjct: 7137766 aagccat 7137760 Score = 52.0 bits (26), Expect = 0.002 Identities = 77/94 (81%) Strand = Plus / Plus Query: 46 gactgctgcggtggcgatggtacgacggcgagggccctcgtcaaggcttatccgcacatc 105 |||||| |||| ||||| || || ||||||||||| |||||| ||| | ||| ||| Sbjct: 11482885 gactgcggcggaggcgacggcgcggcggcgagggccatcgtcagggcattcccgggaatc 11482944 Query: 106 aagtgcaccgtgttggaccttccgaaggtgatcg 139 |||||||||||| |||||||||| ||||||||| Sbjct: 11482945 aagtgcaccgtgctggaccttcctcaggtgatcg 11482978 Score = 48.1 bits (24), Expect = 0.032 Identities = 66/80 (82%) Strand = Plus / Minus Query: 32 tcgagtccctgactgactgctgcggtggcgatggtacgacggcgagggccctcgtcaagg 91 ||||||| ||||| |||||| |||| ||||| || ||| ||||||||||| ||| | ||| Sbjct: 11302470 tcgagtcgctgaccgactgcggcggcggcgacggcacggcggcgagggccatcgccgagg 11302411 Query: 92 cttatccgcacatcaagtgc 111 | | |||||| |||||||| Sbjct: 11302410 ccttcccgcacgtcaagtgc 11302391 Score = 44.1 bits (22), Expect = 0.51 Identities = 76/94 (80%) Strand = Plus / Minus Query: 35 agtccctgactgactgctgcggtggcgatggtacgacggcgagggccctcgtcaaggctt 94 |||| ||||| |||||| |||| |||||||| | |||||| |||| ||||| |||| | Sbjct: 11331063 agtcgctgaccgactgccgcggcggcgatggcgcagcggcgaaggccatcgtcgaggcgt 11331004 Query: 95 atccgcacatcaagtgcaccgtgttggaccttcc 128 || || ||||||||||||||| ||||| |||| Sbjct: 11331003 tcccacatatcaagtgcaccgtgctggactttcc 11330970 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 101 acatcaagtgcaccgtgttggacct 125 ||||||||||||||||| ||||||| Sbjct: 19030506 acatcaagtgcaccgtgatggacct 19030482
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 155 bits (78), Expect = 2e-34 Identities = 156/182 (85%) Strand = Plus / Minus Query: 40 ctgactgactgctgcggtggcgatggtacgacggcgagggccctcgtcaaggcttatccg 99 ||||| ||||||||||| ||||| || ||||||||||||||| ||| |||||| || || Sbjct: 11573465 ctgaccgactgctgcggcggcgacggcacgacggcgagggccatcgccaaggcctaccct 11573406 Query: 100 cacatcaagtgcaccgtgttggaccttccgaaggtgatcgacaaagccccaaaggatggt 159 || |||||||||| ||| |||||||||| |||||||||||||| || || || |||||| Sbjct: 11573405 catgtcaagtgcactgtgctggaccttcccaaggtgatcgacaaggcgcccaatgatggt 11573346 Query: 160 gtcgttaactatgtagcgggtgacctgttccacaccgtcccatcttctcaagccgtcatg 219 |||||||||||||| || |||||| ||||||||||||| ||| | |||||||||| ||| Sbjct: 11573345 gtcgttaactatgttgcaggtgacttgttccacaccgtgccaccggctcaagccgtgatg 11573286 Query: 220 ct 221 || Sbjct: 11573285 ct 11573284 Score = 81.8 bits (41), Expect = 2e-12 Identities = 131/161 (81%) Strand = Plus / Minus Query: 241 tggagcgatgaggattgcgtgaaaatcttaacccagtgcaagaaggccattcctccgcac 300 ||||||||||| ||||||||||| ||||| || ||||||| ||||||||||| | | Sbjct: 11570097 tggagcgatgatgattgcgtgaagatcttgactcagtgcagaaaggccattccatcacga 11570038 Query: 301 gacgagggaggaaagataattatcatagacattgtgattggaccatccttagggccaata 360 || |||||||| ||| | || |||||||| || || ||||||| || |||| ||| || Sbjct: 11570037 gaggagggagggaaggtcatcatcatagagatactggttggaccttcactaggaccagta 11569978 Query: 361 atgtttgaagcccaactcctgatggatatgctcatgatggt 401 |||||||||||||| || ||||||||||||| ||| |||| Sbjct: 11569977 atgtttgaagcccagctgatgatggatatgctgatgttggt 11569937 Score = 77.8 bits (39), Expect = 4e-11 Identities = 54/59 (91%) Strand = Plus / Minus Query: 70 acggcgagggccctcgtcaaggcttatccgcacatcaagtgcaccgtgttggaccttcc 128 |||||||||||| |||||||||| || ||||||||||||||||| ||| |||||||||| Sbjct: 11629134 acggcgagggccatcgtcaaggcgtacccgcacatcaagtgcacggtgctggaccttcc 11629076 Score = 71.9 bits (36), Expect = 2e-09 Identities = 66/76 (86%) Strand = Plus / Minus Query: 68 cgacggcgagggccctcgtcaaggcttatccgcacatcaagtgcaccgtgttggaccttc 127 |||||||||||||| ||| | ||| | ||||||||||||||||| ||| ||||||| | Sbjct: 7204338 cgacggcgagggccatcgccgcggcattcccgcacatcaagtgcacggtgctggacctcc 7204279 Query: 128 cgaaggtgatcgacaa 143 |||||||||||||||| Sbjct: 7204278 cgaaggtgatcgacaa 7204263 Score = 63.9 bits (32), Expect = 5e-07 Identities = 59/68 (86%) Strand = Plus / Minus Query: 154 gatggtgtcgttaactatgtagcgggtgacctgttccacaccgtcccatcttctcaagcc 213 |||||||| || |||||||||||||||||| |||||| | || ||||| || ||||||| Sbjct: 11410133 gatggtgtggtgaactatgtagcgggtgacatgttccgcgccatcccacctgctcaagct 11410074 Query: 214 gtcatgct 221 |||||||| Sbjct: 11410073 gtcatgct 11410066 Score = 61.9 bits (31), Expect = 2e-06 Identities = 85/103 (82%) Strand = Plus / Minus Query: 26 aggggctcgagtccctgactgactgctgcggtggcgatggtacgacggcgagggccctcg 85 ||||||| ||||| ||||| |||||| |||| ||||| || ||||||||||| || ||| Sbjct: 11518222 aggggctggagtcgctgacagactgcggcggcggcgacggcgcgacggcgaggaccatcg 11518163 Query: 86 tcaaggcttatccgcacatcaagtgcaccgtgttggaccttcc 128 || |||| | || ||| |||||||||| ||| |||||||||| Sbjct: 11518162 tcgaggccttcccacacgtcaagtgcactgtgctggaccttcc 11518120 Score = 60.0 bits (30), Expect = 9e-06 Identities = 60/70 (85%) Strand = Plus / Minus Query: 455 aagcagggttcaaagactataaaattgtgaggaaactgggagctcgatgcgttatcgagg 514 ||||||| |||| ||||| || ||||||| |||||||||||||||| |||| | |||| Sbjct: 11433144 aagcaggcttcagtgactacaatattgtgaagaaactgggagctcgaggcgtctttgagg 11433085 Query: 515 tctacccata 524 |||||||||| Sbjct: 11433084 tctacccata 11433075 Score = 56.0 bits (28), Expect = 1e-04 Identities = 127/160 (79%) Strand = Plus / Minus Query: 342 accatccttagggccaataatgtttgaagcccaactcctgatggatatgctcatgatggt 401 |||||| || ||||| ||||||| ||||| || ||| ||||||| |||||||||||||| Sbjct: 11628682 accatctttggggcctgtaatgttcgaagcgcagctcatgatggacatgctcatgatggt 11628623 Query: 402 gacaacaagaggggtccaacggagtgaaaatgactggcgcaagctattcatggaagcagg 461 || || ||||| ||||||| |||||||| |||| | || |||||| |||||| Sbjct: 11628622 gaatactagaggtcgtcaacggaacgaaaatgattggcatgacctgttcatgacagcagg 11628563 Query: 462 gttcaaagactataaaattgtgaggaaactgggagctcga 501 |||| |||||||| ||||||| |||||| || |||||| Sbjct: 11628562 attcagtgactataagattgtgaagaaacttggtgctcga 11628523 Score = 54.0 bits (27), Expect = 5e-04 Identities = 57/67 (85%) Strand = Plus / Minus Query: 224 agcttgtgctacacttttggagcgatgaggattgcgtgaaaatcttaacccagtgcaaga 283 ||||||| || || |||||||||||||| || |||||||| ||| | |||||||||||| Sbjct: 7203797 agcttgtactgcatttttggagcgatgacgactgcgtgaagatcctgtcccagtgcaaga 7203738 Query: 284 aggccat 290 | ||||| Sbjct: 7203737 aagccat 7203731 Score = 52.0 bits (26), Expect = 0.002 Identities = 77/94 (81%) Strand = Plus / Plus Query: 46 gactgctgcggtggcgatggtacgacggcgagggccctcgtcaaggcttatccgcacatc 105 |||||| |||| ||||| || || ||||||||||| |||||| ||| | ||| ||| Sbjct: 11562074 gactgcggcggaggcgacggcgcggcggcgagggccatcgtcagggcattcccgggaatc 11562133 Query: 106 aagtgcaccgtgttggaccttccgaaggtgatcg 139 |||||||||||| |||||||||| ||||||||| Sbjct: 11562134 aagtgcaccgtgctggaccttcctcaggtgatcg 11562167 Score = 48.1 bits (24), Expect = 0.032 Identities = 66/80 (82%) Strand = Plus / Minus Query: 32 tcgagtccctgactgactgctgcggtggcgatggtacgacggcgagggccctcgtcaagg 91 ||||||| ||||| |||||| |||| ||||| || ||| ||||||||||| ||| | ||| Sbjct: 11381659 tcgagtcgctgaccgactgcggcggcggcgacggcacggcggcgagggccatcgccgagg 11381600 Query: 92 cttatccgcacatcaagtgc 111 | | |||||| |||||||| Sbjct: 11381599 ccttcccgcacgtcaagtgc 11381580 Score = 44.1 bits (22), Expect = 0.51 Identities = 76/94 (80%) Strand = Plus / Minus Query: 35 agtccctgactgactgctgcggtggcgatggtacgacggcgagggccctcgtcaaggctt 94 |||| ||||| |||||| |||| |||||||| | |||||| |||| ||||| |||| | Sbjct: 11410252 agtcgctgaccgactgccgcggcggcgatggcgcagcggcgaaggccatcgtcgaggcgt 11410193 Query: 95 atccgcacatcaagtgcaccgtgttggaccttcc 128 || || ||||||||||||||| ||||| |||| Sbjct: 11410192 tcccacatatcaagtgcaccgtgctggactttcc 11410159 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 101 acatcaagtgcaccgtgttggacct 125 ||||||||||||||||| ||||||| Sbjct: 19189155 acatcaagtgcaccgtgatggacct 19189131
>dbj|AK061247.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-211-E05, full insert sequence Length = 1262 Score = 89.7 bits (45), Expect = 1e-14 Identities = 96/113 (84%) Strand = Plus / Plus Query: 154 gatggtgtcgttaactatgtagcgggtgacctgttccacaccgtcccatcttctcaagcc 213 |||||||| || |||||||||||||||||| |||||| | || ||||| || ||||||| Sbjct: 803 gatggtgtggtgaactatgtagcgggtgacatgttccgcgccatcccacctgctcaagct 862 Query: 214 gtcatgcttaagcttgtgctacacttttggagcgatgaggattgcgtgaaaat 266 |||||||| ||||||||||| ||| ||||| || |||||||| |||||||| Sbjct: 863 gtcatgctcaagcttgtgcttcaccactggagtgacgaggattgtgtgaaaat 915 Score = 44.1 bits (22), Expect = 0.51 Identities = 76/94 (80%) Strand = Plus / Plus Query: 35 agtccctgactgactgctgcggtggcgatggtacgacggcgagggccctcgtcaaggctt 94 |||| ||||| |||||| |||| |||||||| | |||||| |||| ||||| |||| | Sbjct: 684 agtcgctgaccgactgccgcggcggcgatggcgcagcggcgaaggccatcgtcgaggcgt 743 Query: 95 atccgcacatcaagtgcaccgtgttggaccttcc 128 || || ||||||||||||||| ||||| |||| Sbjct: 744 tcccacatatcaagtgcaccgtgctggactttcc 777
>gb|AC135258.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0097K08 map C827S, complete sequence Length = 137870 Score = 71.9 bits (36), Expect = 2e-09 Identities = 66/76 (86%) Strand = Plus / Plus Query: 68 cgacggcgagggccctcgtcaaggcttatccgcacatcaagtgcaccgtgttggaccttc 127 |||||||||||||| ||| | ||| | ||||||||||||||||| ||| ||||||| | Sbjct: 44188 cgacggcgagggccatcgccgcggcattcccgcacatcaagtgcacggtgctggacctcc 44247 Query: 128 cgaaggtgatcgacaa 143 |||||||||||||||| Sbjct: 44248 cgaaggtgatcgacaa 44263 Score = 54.0 bits (27), Expect = 5e-04 Identities = 57/67 (85%) Strand = Plus / Plus Query: 224 agcttgtgctacacttttggagcgatgaggattgcgtgaaaatcttaacccagtgcaaga 283 ||||||| || || |||||||||||||| || |||||||| ||| | |||||||||||| Sbjct: 44729 agcttgtactgcatttttggagcgatgacgactgcgtgaagatcctgtcccagtgcaaga 44788 Query: 284 aggccat 290 | ||||| Sbjct: 44789 aagccat 44795
>gb|AC147811.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0026P08 map near C827S, complete sequence Length = 148676 Score = 71.9 bits (36), Expect = 2e-09 Identities = 66/76 (86%) Strand = Plus / Minus Query: 68 cgacggcgagggccctcgtcaaggcttatccgcacatcaagtgcaccgtgttggaccttc 127 |||||||||||||| ||| | ||| | ||||||||||||||||| ||| ||||||| | Sbjct: 51587 cgacggcgagggccatcgccgcggcattcccgcacatcaagtgcacggtgctggacctcc 51528 Query: 128 cgaaggtgatcgacaa 143 |||||||||||||||| Sbjct: 51527 cgaaggtgatcgacaa 51512 Score = 54.0 bits (27), Expect = 5e-04 Identities = 57/67 (85%) Strand = Plus / Minus Query: 224 agcttgtgctacacttttggagcgatgaggattgcgtgaaaatcttaacccagtgcaaga 283 ||||||| || || |||||||||||||| || |||||||| ||| | |||||||||||| Sbjct: 51046 agcttgtactgcatttttggagcgatgacgactgcgtgaagatcctgtcccagtgcaaga 50987 Query: 284 aggccat 290 | ||||| Sbjct: 50986 aagccat 50980
>gb|AC112208.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0015P05 map C53961S, complete sequence Length = 175121 Score = 63.9 bits (32), Expect = 5e-07 Identities = 59/68 (86%) Strand = Plus / Minus Query: 154 gatggtgtcgttaactatgtagcgggtgacctgttccacaccgtcccatcttctcaagcc 213 |||||||| || |||||||||||||||||| |||||| | || ||||| || ||||||| Sbjct: 117302 gatggtgtggtgaactatgtagcgggtgacatgttccgcgccatcccacctgctcaagct 117243 Query: 214 gtcatgct 221 |||||||| Sbjct: 117242 gtcatgct 117235 Score = 60.0 bits (30), Expect = 9e-06 Identities = 60/70 (85%) Strand = Plus / Minus Query: 455 aagcagggttcaaagactataaaattgtgaggaaactgggagctcgatgcgttatcgagg 514 ||||||| |||| ||||| || ||||||| |||||||||||||||| |||| | |||| Sbjct: 140313 aagcaggcttcagtgactacaatattgtgaagaaactgggagctcgaggcgtctttgagg 140254 Query: 515 tctacccata 524 |||||||||| Sbjct: 140253 tctacccata 140244 Score = 48.1 bits (24), Expect = 0.032 Identities = 66/80 (82%) Strand = Plus / Minus Query: 32 tcgagtccctgactgactgctgcggtggcgatggtacgacggcgagggccctcgtcaagg 91 ||||||| ||||| |||||| |||| ||||| || ||| ||||||||||| ||| | ||| Sbjct: 88828 tcgagtcgctgaccgactgcggcggcggcgacggcacggcggcgagggccatcgccgagg 88769 Query: 92 cttatccgcacatcaagtgc 111 | | |||||| |||||||| Sbjct: 88768 ccttcccgcacgtcaagtgc 88749 Score = 44.1 bits (22), Expect = 0.51 Identities = 76/94 (80%) Strand = Plus / Minus Query: 35 agtccctgactgactgctgcggtggcgatggtacgacggcgagggccctcgtcaaggctt 94 |||| ||||| |||||| |||| |||||||| | |||||| |||| ||||| |||| | Sbjct: 117421 agtcgctgaccgactgccgcggcggcgatggcgcagcggcgaaggccatcgtcgaggcgt 117362 Query: 95 atccgcacatcaagtgcaccgtgttggaccttcc 128 || || ||||||||||||||| ||||| |||| Sbjct: 117361 tcccacatatcaagtgcaccgtgctggactttcc 117328
>gb|AY177404.1| Secale cereale O-methyltransferase mRNA, complete cds Length = 1373 Score = 60.0 bits (30), Expect = 9e-06 Identities = 84/102 (82%) Strand = Plus / Plus Query: 418 caacggagtgaaaatgactggcgcaagctattcatggaagcagggttcaaagactataaa 477 ||||| ||||||||| |||||| |||| |||| | |||||||||| | ||||| ||| Sbjct: 1032 caacgaagtgaaaataactggcatgagctcttcacgaaagcagggtttagcgactacaaa 1091 Query: 478 attgtgaggaaactgggagctcgatgcgttatcgaggtctac 519 ||||| | ||||||||| || ||| | ||||||||||||||| Sbjct: 1092 attgtcaagaaactgggtgcacgaggtgttatcgaggtctac 1133 Score = 40.1 bits (20), Expect = 7.9 Identities = 56/68 (82%) Strand = Plus / Plus Query: 269 taacccagtgcaagaaggccattcctccgcacgacgagggaggaaagataattatcatag 328 ||||||| || ||| | ||||||||| | | ||| |||||||||||| | ||| | |||| Sbjct: 883 taacccaatgtaaggatgccattccttcacgcgaggagggaggaaaggtgattgtaatag 942 Query: 329 acattgtg 336 |||||||| Sbjct: 943 acattgtg 950
>dbj|AK109384.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-211-A06, full insert sequence Length = 1300 Score = 52.0 bits (26), Expect = 0.002 Identities = 77/94 (81%) Strand = Plus / Plus Query: 46 gactgctgcggtggcgatggtacgacggcgagggccctcgtcaaggcttatccgcacatc 105 |||||| |||| ||||| || || ||||||||||| |||||| ||| | ||| ||| Sbjct: 712 gactgcggcggaggcgacggcgcggcggcgagggccatcgtcagggcattcccgggaatc 771 Query: 106 aagtgcaccgtgttggaccttccgaaggtgatcg 139 |||||||||||| |||||||||| ||||||||| Sbjct: 772 aagtgcaccgtgctggaccttcctcaggtgatcg 805
>ref|XM_477999.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1083 Score = 48.1 bits (24), Expect = 0.032 Identities = 30/32 (93%) Strand = Plus / Plus Query: 97 ccgcacatcaagtgcaccgtgttggaccttcc 128 ||||| ||||||||||||||| |||||||||| Sbjct: 643 ccgcatatcaagtgcaccgtgctggaccttcc 674
>gb|AC120377.25| Mus musculus chromosome 3, clone RP24-262L5, complete sequence Length = 158004 Score = 48.1 bits (24), Expect = 0.032 Identities = 30/32 (93%) Strand = Plus / Plus Query: 528 tgttgtgctctaaggatatgaataaagagagg 559 |||||||||| ||||||||||||| ||||||| Sbjct: 124332 tgttgtgctcaaaggatatgaatagagagagg 124363
>gb|AC119995.22| Mus musculus chromosome 3, clone RP24-120B18, complete sequence Length = 182140 Score = 48.1 bits (24), Expect = 0.032 Identities = 30/32 (93%) Strand = Plus / Minus Query: 528 tgttgtgctctaaggatatgaataaagagagg 559 |||||||||| ||||||||||||| ||||||| Sbjct: 154009 tgttgtgctcaaaggatatgaatagagagagg 153978
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 48.1 bits (24), Expect = 0.032 Identities = 30/32 (93%) Strand = Plus / Minus Query: 97 ccgcacatcaagtgcaccgtgttggaccttcc 128 ||||| ||||||||||||||| |||||||||| Sbjct: 16264615 ccgcatatcaagtgcaccgtgctggaccttcc 16264584 Score = 48.1 bits (24), Expect = 0.032 Identities = 30/32 (93%) Strand = Plus / Plus Query: 97 ccgcacatcaagtgcaccgtgttggaccttcc 128 ||||| ||||||||||||||| |||||||||| Sbjct: 16220102 ccgcatatcaagtgcaccgtgctggaccttcc 16220133 Score = 40.1 bits (20), Expect = 7.9 Identities = 29/32 (90%) Strand = Plus / Minus Query: 97 ccgcacatcaagtgcaccgtgttggaccttcc 128 ||||| ||||||||||| ||| |||||||||| Sbjct: 16295288 ccgcatatcaagtgcacggtgctggaccttcc 16295257
>dbj|AP003916.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1634_H04 Length = 151699 Score = 48.1 bits (24), Expect = 0.032 Identities = 30/32 (93%) Strand = Plus / Minus Query: 97 ccgcacatcaagtgcaccgtgttggaccttcc 128 ||||| ||||||||||||||| |||||||||| Sbjct: 85053 ccgcatatcaagtgcaccgtgctggaccttcc 85022 Score = 48.1 bits (24), Expect = 0.032 Identities = 30/32 (93%) Strand = Plus / Plus Query: 97 ccgcacatcaagtgcaccgtgttggaccttcc 128 ||||| ||||||||||||||| |||||||||| Sbjct: 40540 ccgcatatcaagtgcaccgtgctggaccttcc 40571 Score = 40.1 bits (20), Expect = 7.9 Identities = 29/32 (90%) Strand = Plus / Minus Query: 97 ccgcacatcaagtgcaccgtgttggaccttcc 128 ||||| ||||||||||| ||| |||||||||| Sbjct: 115726 ccgcatatcaagtgcacggtgctggaccttcc 115695
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Minus Query: 240 ttggagcgatgaggattgcgtgaaaatctt 269 ||||||||||||||||||||| | |||||| Sbjct: 22270897 ttggagcgatgaggattgcgtaagaatctt 22270868
>dbj|AP004662.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0048G02 Length = 155542 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Minus Query: 240 ttggagcgatgaggattgcgtgaaaatctt 269 ||||||||||||||||||||| | |||||| Sbjct: 87273 ttggagcgatgaggattgcgtaagaatctt 87244
>gb|AY107519.1| Zea mays PCO078033 mRNA sequence Length = 1299 Score = 44.1 bits (22), Expect = 0.51 Identities = 31/34 (91%) Strand = Plus / Plus Query: 370 gcccaactcctgatggatatgctcatgatggtga 403 ||||| || |||||||| |||||||||||||||| Sbjct: 954 gcccagctgctgatggacatgctcatgatggtga 987
>gb|AC134925.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0041J17, complete sequence Length = 148829 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 101 acatcaagtgcaccgtgttggacct 125 ||||||||||||||||| ||||||| Sbjct: 133704 acatcaagtgcaccgtgatggacct 133680
>gb|AC136481.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0007D07, complete sequence Length = 133930 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 101 acatcaagtgcaccgtgttggacct 125 ||||||||||||||||| ||||||| Sbjct: 33324 acatcaagtgcaccgtgatggacct 33300
>emb|AL591785.1|SME591785 Sinorhizobium meliloti 1021 complete chromosome; segment 4/12 Length = 286550 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 17 acatcttcaaggggctcgagt 37 ||||||||||||||||||||| Sbjct: 140491 acatcttcaaggggctcgagt 140471
>gb|AC098710.2| Mus musculus BAC clone RP23-1L15 from 5, complete sequence Length = 213811 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 458 cagggttcaaagactataaaattgt 482 ||||||||| ||||||||||||||| Sbjct: 60789 cagggttcatagactataaaattgt 60813
>emb|AL160412.14| Human DNA sequence from clone RP5-827E24 on chromosome 20 Contains ESTs, STSs and GSSs, complete sequence Length = 111824 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 380 tgatggatatgctcatgatggtgacaaca 408 |||||| |||| ||||||||||||||||| Sbjct: 72460 tgatggttatggtcatgatggtgacaaca 72432
>ref|XM_478005.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1026 Score = 40.1 bits (20), Expect = 7.9 Identities = 29/32 (90%) Strand = Plus / Plus Query: 97 ccgcacatcaagtgcaccgtgttggaccttcc 128 ||||| ||||||||||| ||| |||||||||| Sbjct: 613 ccgcatatcaagtgcacggtgctggaccttcc 644
>gb|AC125735.1| Leishmania major strain Friedlin chromosome 3, complete sequence Length = 384518 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 433 gactggcgcaagctattcatggaa 456 |||||||||||||| ||||||||| Sbjct: 298063 gactggcgcaagctcttcatggaa 298040
>gb|AC091458.5| Mus musculus chromosome 12, clone RP23-68M8, complete sequence Length = 289751 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 313 aagataattatcatagacat 332 |||||||||||||||||||| Sbjct: 157935 aagataattatcatagacat 157954
>emb|CR855978.1| Paramecium tetraurelia macronuclear, gene for synaptobrevin 6, isoform 2, pseudogene Length = 885 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 536 tctaaggatatgaataaagagaggtgtt 563 |||||||||||||||||| |||| |||| Sbjct: 738 tctaaggatatgaataaaaagagttgtt 765
>emb|CR855902.1| Paramecium tetraurelia macronuclear, gene for synaptobrevin 6, isoform 1, complete gene Length = 860 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 536 tctaaggatatgaataaagagaggtgtt 563 |||||||||||||||||| |||| |||| Sbjct: 703 tctaaggatatgaataaaaagagttgtt 730
>emb|AL136371.8| Human DNA sequence from clone RP11-110P20 on chromosome 1q31.1 Contains STSs, GSSs and a CpG island, complete sequence Length = 147784 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 30 gctcgagtccctgactgact 49 |||||||||||||||||||| Sbjct: 47681 gctcgagtccctgactgact 47700
>gb|AC008639.8| Homo sapiens chromosome 5 clone CTB-179J16, complete sequence Length = 108337 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 259 gtgaaaatcttaacccagtgcaag 282 |||||||||||| ||||||||||| Sbjct: 27857 gtgaaaatcttagcccagtgcaag 27834
>gb|AC010854.3|AC010854 Homo sapiens chromosome 18, clone RP11-349N23, complete sequence Length = 169682 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 259 gtgaaaatcttaacccagtgcaag 282 |||||||||||| ||||||||||| Sbjct: 105160 gtgaaaatcttagcccagtgcaag 105137
>dbj|AP005188.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0473C09 Length = 141066 Score = 40.1 bits (20), Expect = 7.9 Identities = 29/32 (90%) Strand = Plus / Minus Query: 97 ccgcacatcaagtgcaccgtgttggaccttcc 128 ||||| ||||||||||| ||| |||||||||| Sbjct: 1344 ccgcatatcaagtgcacggtgctggaccttcc 1313
>emb|AL591208.24| Mouse DNA sequence from clone RP23-149I2 on chromosome 12, complete sequence Length = 199854 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 313 aagataattatcatagacat 332 |||||||||||||||||||| Sbjct: 147649 aagataattatcatagacat 147630 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,194,361 Number of Sequences: 3902068 Number of extensions: 4194361 Number of successful extensions: 66905 Number of sequences better than 10.0: 36 Number of HSP's better than 10.0 without gapping: 40 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 66547 Number of HSP's gapped (non-prelim): 341 length of query: 582 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 559 effective length of database: 17,143,297,704 effective search space: 9583103416536 effective search space used: 9583103416536 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
