>FTSK_HELPJ (Q9ZM87) DNA translocase ftsK|
          Length = 844

 Score = 32.7 bits (73), Expect = 0.54
 Identities = 11/31 (35%), Positives = 21/31 (67%)
 Frame = -2

Query: 452 LPINPTTTHSHDRKYSHKTPDVPLVSSEISE 360
           +PI+ + T +HD+  +HKTP+ P+   ++ E
Sbjct: 288 MPISASNTENHDKTENHKTPNHPIKEDDLQE 318

>MBX1_SCHPO (O42954) MADS-box transcription factor 1|
          Length = 436

 Score = 32.0 bits (71), Expect = 0.92
 Identities = 32/106 (30%), Positives = 45/106 (42%), Gaps = 6/106 (5%)
 Frame = -2

Query: 452 LPINPTTTHSHDRKYSHKTPDVPLVSSEISEFYAIYEPEVAREEIRGSLADFKRHE*LRS 273
           LP++PT  HS     S    D PL  S  S F       V  E +  +L+ F+ ++  ++
Sbjct: 159 LPLSPTVKHSFVSPVSGDYSDSPLEPSSSSSF------SVPPESLNPTLS-FQHNDVPQT 211

Query: 272 KTLQPFL-PHRTTCLQM-----LIFVRRQHSIKNSRSANNELNILH 153
               PFL P R    Q         VRR  S KN R+    ++ LH
Sbjct: 212 DNFIPFLTPKRQAYGQSSSRADRSSVRRSQSFKNRRNGKPRISRLH 257

>Y1375_HAEIN (P44169) Hypothetical protein HI1375|
          Length = 302

 Score = 31.2 bits (69), Expect = 1.6
 Identities = 16/45 (35%), Positives = 23/45 (51%)
 Frame = -2

Query: 317 RGSLADFKRHE*LRSKTLQPFLPHRTTCLQMLIFVRRQHSIKNSR 183
           +G L+  K+ +    K +Q       T L   IF+R + SIKNSR
Sbjct: 8   KGQLSQLKQQKFKLEKDIQRLFEENLTLLSGYIFIRSEFSIKNSR 52


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 59,379,315
Number of Sequences: 219361
Number of extensions: 1034837
Number of successful extensions: 2879
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2774
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2879
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3465624120
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)