ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags18c11
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AT5L2_HUMAN (Q7Z4Y8) ATP synthase subunit g 2, mitochondrial (EC... 32 2.0
2PKNK_MYCTU (P95078) Probable serine/threonine-protein kinase pkn... 30 4.4
3PKNK_MYCBO (Q7TXA9) Probable serine/threonine-protein kinase pkn... 30 4.4
4MURD_BACHD (Q9K9S8) UDP-N-acetylmuramoylalanine--D-glutamate lig... 29 9.9

>AT5L2_HUMAN (Q7Z4Y8) ATP synthase subunit g 2, mitochondrial (EC 3.6.3.14)|
           (ATPase subunit g 2)
          Length = 100

 Score = 31.6 bits (70), Expect = 2.0
 Identities = 19/50 (38%), Positives = 31/50 (62%)
 Frame = +3

Query: 300 LLSSAVRTLKPKEADWFYTPVYTTCDLTPAGLPLPFKSPRVMRSAIQYIS 449
           L+++AV  LKP+ A ++Y   YTT +L P   P P + PR ++S  + +S
Sbjct: 15  LVNAAVTYLKPRLAAFWY---YTTVELVP---PTPAEIPRAIQSLKKIVS 58



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>PKNK_MYCTU (P95078) Probable serine/threonine-protein kinase pknK (EC|
           2.7.11.1)
          Length = 1110

 Score = 30.4 bits (67), Expect = 4.4
 Identities = 25/110 (22%), Positives = 46/110 (41%)
 Frame = +3

Query: 258 LNHMFAAEIFMHRFLLSSAVRTLKPKEADWFYTPVYTTCDLTPAGLPLPFKSPRVMRSAI 437
           L  +  A   +H FL  + + TL+P+  ++    V +  + T  GL          R+ +
Sbjct: 572 LRGLSGASDVIHEFLSENVLDTLEPELREFLL--VASVTERTCGGLASALAGITNGRAML 629

Query: 438 QYISHKWPFWNRTDGADHFFVVPHDFGACFHYQEEKAIERGILPLLRRAT 587
           +   H+  F  RT+   ++F     F    H + E+     +  L RRA+
Sbjct: 630 EEAEHRGLFLQRTEDDPNWFRFHQMFADFLHRRLERGGSHRVAELHRRAS 679



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>PKNK_MYCBO (Q7TXA9) Probable serine/threonine-protein kinase pknK (EC|
           2.7.11.1)
          Length = 1110

 Score = 30.4 bits (67), Expect = 4.4
 Identities = 25/110 (22%), Positives = 46/110 (41%)
 Frame = +3

Query: 258 LNHMFAAEIFMHRFLLSSAVRTLKPKEADWFYTPVYTTCDLTPAGLPLPFKSPRVMRSAI 437
           L  +  A   +H FL  + + TL+P+  ++    V +  + T  GL          R+ +
Sbjct: 572 LRGLSGASDVIHEFLSENVLDTLEPELREFLL--VASVTERTCGGLASALAGITNGRAML 629

Query: 438 QYISHKWPFWNRTDGADHFFVVPHDFGACFHYQEEKAIERGILPLLRRAT 587
           +   H+  F  RT+   ++F     F    H + E+     +  L RRA+
Sbjct: 630 EEAEHRGLFLQRTEDDPNWFRFHQMFADFLHRRLERGGSHRVAELHRRAS 679



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>MURD_BACHD (Q9K9S8) UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC|
           6.3.2.9) (UDP-N-acetylmuramoyl-L-alanyl-D-glutamate
           synthetase) (D-glutamic acid-adding enzyme)
          Length = 450

 Score = 29.3 bits (64), Expect = 9.9
 Identities = 13/41 (31%), Positives = 25/41 (60%)
 Frame = +1

Query: 298 SCSQVLCVHSNPKRLIGSTHQFIPRVILLLLVFPCHSSHHG 420
           +   V+ +  +  +L+G++H F P+V +LL +F  H  +HG
Sbjct: 158 TADDVIVMEVSSFQLMGTSH-FRPKVAILLNIFDAHLDYHG 197


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 88,835,183
Number of Sequences: 219361
Number of extensions: 1873181
Number of successful extensions: 4603
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4362
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4603
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5710231900
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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