| Clone Name | bags18c11 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AT5L2_HUMAN (Q7Z4Y8) ATP synthase subunit g 2, mitochondrial (EC... | 32 | 2.0 | 2 | PKNK_MYCTU (P95078) Probable serine/threonine-protein kinase pkn... | 30 | 4.4 | 3 | PKNK_MYCBO (Q7TXA9) Probable serine/threonine-protein kinase pkn... | 30 | 4.4 | 4 | MURD_BACHD (Q9K9S8) UDP-N-acetylmuramoylalanine--D-glutamate lig... | 29 | 9.9 |
|---|
>AT5L2_HUMAN (Q7Z4Y8) ATP synthase subunit g 2, mitochondrial (EC 3.6.3.14)| (ATPase subunit g 2) Length = 100 Score = 31.6 bits (70), Expect = 2.0 Identities = 19/50 (38%), Positives = 31/50 (62%) Frame = +3 Query: 300 LLSSAVRTLKPKEADWFYTPVYTTCDLTPAGLPLPFKSPRVMRSAIQYIS 449 L+++AV LKP+ A ++Y YTT +L P P P + PR ++S + +S Sbjct: 15 LVNAAVTYLKPRLAAFWY---YTTVELVP---PTPAEIPRAIQSLKKIVS 58
>PKNK_MYCTU (P95078) Probable serine/threonine-protein kinase pknK (EC| 2.7.11.1) Length = 1110 Score = 30.4 bits (67), Expect = 4.4 Identities = 25/110 (22%), Positives = 46/110 (41%) Frame = +3 Query: 258 LNHMFAAEIFMHRFLLSSAVRTLKPKEADWFYTPVYTTCDLTPAGLPLPFKSPRVMRSAI 437 L + A +H FL + + TL+P+ ++ V + + T GL R+ + Sbjct: 572 LRGLSGASDVIHEFLSENVLDTLEPELREFLL--VASVTERTCGGLASALAGITNGRAML 629 Query: 438 QYISHKWPFWNRTDGADHFFVVPHDFGACFHYQEEKAIERGILPLLRRAT 587 + H+ F RT+ ++F F H + E+ + L RRA+ Sbjct: 630 EEAEHRGLFLQRTEDDPNWFRFHQMFADFLHRRLERGGSHRVAELHRRAS 679
>PKNK_MYCBO (Q7TXA9) Probable serine/threonine-protein kinase pknK (EC| 2.7.11.1) Length = 1110 Score = 30.4 bits (67), Expect = 4.4 Identities = 25/110 (22%), Positives = 46/110 (41%) Frame = +3 Query: 258 LNHMFAAEIFMHRFLLSSAVRTLKPKEADWFYTPVYTTCDLTPAGLPLPFKSPRVMRSAI 437 L + A +H FL + + TL+P+ ++ V + + T GL R+ + Sbjct: 572 LRGLSGASDVIHEFLSENVLDTLEPELREFLL--VASVTERTCGGLASALAGITNGRAML 629 Query: 438 QYISHKWPFWNRTDGADHFFVVPHDFGACFHYQEEKAIERGILPLLRRAT 587 + H+ F RT+ ++F F H + E+ + L RRA+ Sbjct: 630 EEAEHRGLFLQRTEDDPNWFRFHQMFADFLHRRLERGGSHRVAELHRRAS 679
>MURD_BACHD (Q9K9S8) UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC| 6.3.2.9) (UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase) (D-glutamic acid-adding enzyme) Length = 450 Score = 29.3 bits (64), Expect = 9.9 Identities = 13/41 (31%), Positives = 25/41 (60%) Frame = +1 Query: 298 SCSQVLCVHSNPKRLIGSTHQFIPRVILLLLVFPCHSSHHG 420 + V+ + + +L+G++H F P+V +LL +F H +HG Sbjct: 158 TADDVIVMEVSSFQLMGTSH-FRPKVAILLNIFDAHLDYHG 197 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 88,835,183 Number of Sequences: 219361 Number of extensions: 1873181 Number of successful extensions: 4603 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 4362 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4603 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5710231900 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)