ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags18c11 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_472344.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1263 Score = 492 bits (248), Expect = e-136 Identities = 437/500 (87%) Strand = Plus / Plus Query: 124 agcagcacagcgagcgcatctcaggaagtgctggtgatgtgctagaagacaatcctgtgg 183 ||||||||||||||||||||||||| ||||| || |||||||| |||||||||||||||| Sbjct: 95 agcagcacagcgagcgcatctcagggagtgccggcgatgtgctcgaagacaatcctgtgg 154 Query: 184 gaaagttaaaggttttcatatacgacttgccaagaaaatacaacaagaagatggtcacca 243 | | ||| ||||| ||||| || ||| | |||||||| ||||||||||||||||||| || Sbjct: 155 ggaggttgaaggtcttcatctatgacctcccaagaaagtacaacaagaagatggtcaaca 214 Query: 244 aggatccccggtgccttaatcacatgtttgctgcggaaatattcatgcaccgtttcttgc 303 |||||||||||||||| ||||||||||||||||| |||||||||||||| || ||||||| Sbjct: 215 aggatccccggtgcctcaatcacatgtttgctgcagaaatattcatgcatcgcttcttgc 274 Query: 304 tctcaagtgctgtgcgtacactcaaacccaaagaggctgattggttctacacaccagttt 363 |||| |||||||| || |||||||| ||||| |||||||||||||| ||||| ||||||| Sbjct: 275 tctcgagtgctgttcggacactcaaccccaaggaggctgattggttttacacgccagttt 334 Query: 364 ataccacgtgtgatcttactcctgctggtcttcccttgccattcaagtcaccacgggtga 423 |||| || ||||| || ||||| ||||| || ||||||||||| ||||| || |||||| Sbjct: 335 atactacttgtgacctaactccggctggactgcccttgccatttaagtcgccgagggtga 394 Query: 424 tgaggagtgcaattcagtatatttcgcataaatggcccttttggaaccgaactgatggcg 483 |||||||||| || ||||| |||||||| || |||||||| ||||| |||| ||||| | Sbjct: 395 tgaggagtgcgatccagtacatttcgcacaagtggcccttctggaatagaacagatggag 454 Query: 484 cagatcacttctttgttgtcccacatgactttggggcttgctttcattatcaggaagaaa 543 |||| ||||||||||||||||| ||||| ||||| || || ||||| ||||||||||||| Sbjct: 455 cagaccacttctttgttgtcccgcatgattttggtgcatgttttcactatcaggaagaaa 514 Query: 544 aagctattgaacgtggcattctcccattgctgcgacgcgctacattggtgcagacatttg 603 |||||||||| ||||| ||||| || ||||||| ||| ||||| ||||| || ||||||| Sbjct: 515 aagctattgagcgtggaattctaccgttgctgcaacgtgctacgttggtccaaacatttg 574 Query: 604 gacaggagaatcatgtttgc 623 |||||||||| ||||||||| Sbjct: 575 gacaggagaaccatgtttgc 594
>dbj|AK107473.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-129-B06, full insert sequence Length = 2766 Score = 492 bits (248), Expect = e-136 Identities = 437/500 (87%) Strand = Plus / Plus Query: 124 agcagcacagcgagcgcatctcaggaagtgctggtgatgtgctagaagacaatcctgtgg 183 ||||||||||||||||||||||||| ||||| || |||||||| |||||||||||||||| Sbjct: 284 agcagcacagcgagcgcatctcagggagtgccggcgatgtgctcgaagacaatcctgtgg 343 Query: 184 gaaagttaaaggttttcatatacgacttgccaagaaaatacaacaagaagatggtcacca 243 | | ||| ||||| ||||| || ||| | |||||||| ||||||||||||||||||| || Sbjct: 344 ggaggttgaaggtcttcatctatgacctcccaagaaagtacaacaagaagatggtcaaca 403 Query: 244 aggatccccggtgccttaatcacatgtttgctgcggaaatattcatgcaccgtttcttgc 303 |||||||||||||||| ||||||||||||||||| |||||||||||||| || ||||||| Sbjct: 404 aggatccccggtgcctcaatcacatgtttgctgcagaaatattcatgcatcgcttcttgc 463 Query: 304 tctcaagtgctgtgcgtacactcaaacccaaagaggctgattggttctacacaccagttt 363 |||| |||||||| || |||||||| ||||| |||||||||||||| ||||| ||||||| Sbjct: 464 tctcgagtgctgttcggacactcaaccccaaggaggctgattggttttacacgccagttt 523 Query: 364 ataccacgtgtgatcttactcctgctggtcttcccttgccattcaagtcaccacgggtga 423 |||| || ||||| || ||||| ||||| || ||||||||||| ||||| || |||||| Sbjct: 524 atactacttgtgacctaactccggctggactgcccttgccatttaagtcgccgagggtga 583 Query: 424 tgaggagtgcaattcagtatatttcgcataaatggcccttttggaaccgaactgatggcg 483 |||||||||| || ||||| |||||||| || |||||||| ||||| |||| ||||| | Sbjct: 584 tgaggagtgcgatccagtacatttcgcacaagtggcccttctggaatagaacagatggag 643 Query: 484 cagatcacttctttgttgtcccacatgactttggggcttgctttcattatcaggaagaaa 543 |||| ||||||||||||||||| ||||| ||||| || || ||||| ||||||||||||| Sbjct: 644 cagaccacttctttgttgtcccgcatgattttggtgcatgttttcactatcaggaagaaa 703 Query: 544 aagctattgaacgtggcattctcccattgctgcgacgcgctacattggtgcagacatttg 603 |||||||||| ||||| ||||| || ||||||| ||| ||||| ||||| || ||||||| Sbjct: 704 aagctattgagcgtggaattctaccgttgctgcaacgtgctacgttggtccaaacatttg 763 Query: 604 gacaggagaatcatgtttgc 623 |||||||||| ||||||||| Sbjct: 764 gacaggagaaccatgtttgc 783
>dbj|AK073335.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033026F13, full insert sequence Length = 1704 Score = 492 bits (248), Expect = e-136 Identities = 437/500 (87%) Strand = Plus / Plus Query: 124 agcagcacagcgagcgcatctcaggaagtgctggtgatgtgctagaagacaatcctgtgg 183 ||||||||||||||||||||||||| ||||| || |||||||| |||||||||||||||| Sbjct: 343 agcagcacagcgagcgcatctcagggagtgccggcgatgtgctcgaagacaatcctgtgg 402 Query: 184 gaaagttaaaggttttcatatacgacttgccaagaaaatacaacaagaagatggtcacca 243 | | ||| ||||| ||||| || ||| | |||||||| ||||||||||||||||||| || Sbjct: 403 ggaggttgaaggtcttcatctatgacctcccaagaaagtacaacaagaagatggtcaaca 462 Query: 244 aggatccccggtgccttaatcacatgtttgctgcggaaatattcatgcaccgtttcttgc 303 |||||||||||||||| ||||||||||||||||| |||||||||||||| || ||||||| Sbjct: 463 aggatccccggtgcctcaatcacatgtttgctgcagaaatattcatgcatcgcttcttgc 522 Query: 304 tctcaagtgctgtgcgtacactcaaacccaaagaggctgattggttctacacaccagttt 363 |||| |||||||| || |||||||| ||||| |||||||||||||| ||||| ||||||| Sbjct: 523 tctcgagtgctgttcggacactcaaccccaaggaggctgattggttttacacgccagttt 582 Query: 364 ataccacgtgtgatcttactcctgctggtcttcccttgccattcaagtcaccacgggtga 423 |||| || ||||| || ||||| ||||| || ||||||||||| ||||| || |||||| Sbjct: 583 atactacttgtgacctaactccggctggactgcccttgccatttaagtcgccgagggtga 642 Query: 424 tgaggagtgcaattcagtatatttcgcataaatggcccttttggaaccgaactgatggcg 483 |||||||||| || ||||| |||||||| || |||||||| ||||| |||| ||||| | Sbjct: 643 tgaggagtgcgatccagtacatttcgcacaagtggcccttctggaatagaacagatggag 702 Query: 484 cagatcacttctttgttgtcccacatgactttggggcttgctttcattatcaggaagaaa 543 |||| ||||||||||||||||| ||||| ||||| || || ||||| ||||||||||||| Sbjct: 703 cagaccacttctttgttgtcccgcatgattttggtgcatgttttcactatcaggaagaaa 762 Query: 544 aagctattgaacgtggcattctcccattgctgcgacgcgctacattggtgcagacatttg 603 |||||||||| ||||| ||||| || ||||||| ||| ||||| ||||| || ||||||| Sbjct: 763 aagctattgagcgtggaattctaccgttgctgcaacgtgctacgttggtccaaacatttg 822 Query: 604 gacaggagaatcatgtttgc 623 |||||||||| ||||||||| Sbjct: 823 gacaggagaaccatgtttgc 842
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 357 bits (180), Expect = 3e-95 Identities = 336/388 (86%) Strand = Plus / Plus Query: 150 agtgctggtgatgtgctagaagacaatcctgtgggaaagttaaaggttttcatatacgac 209 ||||| || |||||||| ||||||||||||||||| | ||| ||||| ||||| || ||| Sbjct: 19700247 agtgccggcgatgtgctcgaagacaatcctgtggggaggttgaaggtcttcatctatgac 19700306 Query: 210 ttgccaagaaaatacaacaagaagatggtcaccaaggatccccggtgccttaatcacatg 269 | |||||||| ||||||||||||||||||| |||||||||||||||||| ||||||||| Sbjct: 19700307 ctcccaagaaagtacaacaagaagatggtcaacaaggatccccggtgcctcaatcacatg 19700366 Query: 270 tttgctgcggaaatattcatgcaccgtttcttgctctcaagtgctgtgcgtacactcaaa 329 |||||||| |||||||||||||| || ||||||||||| |||||||| || |||||||| Sbjct: 19700367 tttgctgcagaaatattcatgcatcgcttcttgctctcgagtgctgttcggacactcaac 19700426 Query: 330 cccaaagaggctgattggttctacacaccagtttataccacgtgtgatcttactcctgct 389 ||||| |||||||||||||| ||||| ||||||||||| || ||||| || ||||| ||| Sbjct: 19700427 cccaaggaggctgattggttttacacgccagtttatactacttgtgacctaactccggct 19700486 Query: 390 ggtcttcccttgccattcaagtcaccacgggtgatgaggagtgcaattcagtatatttcg 449 || || ||||||||||| ||||| || |||||||||||||||| || ||||| |||||| Sbjct: 19700487 ggactgcccttgccatttaagtcgccgagggtgatgaggagtgcgatccagtacatttcg 19700546 Query: 450 cataaatggcccttttggaaccgaactgatggcgcagatcacttctttgttgtcccacat 509 || || |||||||| ||||| |||| ||||| ||||| ||||||||||||||||| ||| Sbjct: 19700547 cacaagtggcccttctggaatagaacagatggagcagaccacttctttgttgtcccgcat 19700606 Query: 510 gactttggggcttgctttcattatcagg 537 || ||||| || || ||||| ||||||| Sbjct: 19700607 gattttggtgcatgttttcactatcagg 19700634 Score = 97.6 bits (49), Expect = 4e-17 Identities = 79/89 (88%) Strand = Plus / Plus Query: 535 aggaagaaaaagctattgaacgtggcattctcccattgctgcgacgcgctacattggtgc 594 ||||||||||||||||||| ||||| ||||| || ||||||| ||| ||||| ||||| | Sbjct: 19700822 aggaagaaaaagctattgagcgtggaattctaccgttgctgcaacgtgctacgttggtcc 19700881 Query: 595 agacatttggacaggagaatcatgtttgc 623 | ||||||||||||||||| ||||||||| Sbjct: 19700882 aaacatttggacaggagaaccatgtttgc 19700910 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Plus Query: 124 agcagcacagcgagcgcatctcagg 148 ||||||||||||||||||||||||| Sbjct: 19699449 agcagcacagcgagcgcatctcagg 19699473 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 73 cgccggccgccgcggccgct 92 |||||||||||||||||||| Sbjct: 21534407 cgccggccgccgcggccgct 21534388
>emb|AL731591.3|OSJN00240 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0039C07, complete sequence Length = 166410 Score = 357 bits (180), Expect = 3e-95 Identities = 336/388 (86%) Strand = Plus / Plus Query: 150 agtgctggtgatgtgctagaagacaatcctgtgggaaagttaaaggttttcatatacgac 209 ||||| || |||||||| ||||||||||||||||| | ||| ||||| ||||| || ||| Sbjct: 150973 agtgccggcgatgtgctcgaagacaatcctgtggggaggttgaaggtcttcatctatgac 151032 Query: 210 ttgccaagaaaatacaacaagaagatggtcaccaaggatccccggtgccttaatcacatg 269 | |||||||| ||||||||||||||||||| |||||||||||||||||| ||||||||| Sbjct: 151033 ctcccaagaaagtacaacaagaagatggtcaacaaggatccccggtgcctcaatcacatg 151092 Query: 270 tttgctgcggaaatattcatgcaccgtttcttgctctcaagtgctgtgcgtacactcaaa 329 |||||||| |||||||||||||| || ||||||||||| |||||||| || |||||||| Sbjct: 151093 tttgctgcagaaatattcatgcatcgcttcttgctctcgagtgctgttcggacactcaac 151152 Query: 330 cccaaagaggctgattggttctacacaccagtttataccacgtgtgatcttactcctgct 389 ||||| |||||||||||||| ||||| ||||||||||| || ||||| || ||||| ||| Sbjct: 151153 cccaaggaggctgattggttttacacgccagtttatactacttgtgacctaactccggct 151212 Query: 390 ggtcttcccttgccattcaagtcaccacgggtgatgaggagtgcaattcagtatatttcg 449 || || ||||||||||| ||||| || |||||||||||||||| || ||||| |||||| Sbjct: 151213 ggactgcccttgccatttaagtcgccgagggtgatgaggagtgcgatccagtacatttcg 151272 Query: 450 cataaatggcccttttggaaccgaactgatggcgcagatcacttctttgttgtcccacat 509 || || |||||||| ||||| |||| ||||| ||||| ||||||||||||||||| ||| Sbjct: 151273 cacaagtggcccttctggaatagaacagatggagcagaccacttctttgttgtcccgcat 151332 Query: 510 gactttggggcttgctttcattatcagg 537 || ||||| || || ||||| ||||||| Sbjct: 151333 gattttggtgcatgttttcactatcagg 151360 Score = 97.6 bits (49), Expect = 4e-17 Identities = 79/89 (88%) Strand = Plus / Plus Query: 535 aggaagaaaaagctattgaacgtggcattctcccattgctgcgacgcgctacattggtgc 594 ||||||||||||||||||| ||||| ||||| || ||||||| ||| ||||| ||||| | Sbjct: 151548 aggaagaaaaagctattgagcgtggaattctaccgttgctgcaacgtgctacgttggtcc 151607 Query: 595 agacatttggacaggagaatcatgtttgc 623 | ||||||||||||||||| ||||||||| Sbjct: 151608 aaacatttggacaggagaaccatgtttgc 151636 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Plus Query: 124 agcagcacagcgagcgcatctcagg 148 ||||||||||||||||||||||||| Sbjct: 150175 agcagcacagcgagcgcatctcagg 150199
>ref|XM_466000.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1305 Score = 329 bits (166), Expect = 6e-87 Identities = 406/486 (83%) Strand = Plus / Plus Query: 134 cgagcgcatctcaggaagtgctggtgatgtgctagaagacaatcctgtgggaaagttaaa 193 ||||||||||||||||||||||||||||||||||||||||||||| || || ||| || Sbjct: 144 cgagcgcatctcaggaagtgctggtgatgtgctagaagacaatccagttgggcggttgaa 203 Query: 194 ggttttcatatacgacttgccaagaaaatacaacaagaagatggtcaccaaggatccccg 253 |||||| | || ||||||||||| || || ||||||| ||| ||| ||||||||||||| Sbjct: 204 ggtttttgtttatgacttgccaagcaagtataacaagaggatagtcgccaaggatccccg 263 Query: 254 gtgccttaatcacatgtttgctgcggaaatattcatgcaccgtttcttgctctcaagtgc 313 ||||| || |||||||||||||| || ||||| ||||| |||||||||||||| ||||| Sbjct: 264 atgcctcaaccacatgtttgctgctgagatatttatgcatcgtttcttgctctctagtgc 323 Query: 314 tgtgcgtacactcaaacccaaagaggctgattggttctacacaccagtttataccacgtg 373 ||| || || ||||| || || |||||||||||||||| | || ||||| || || || Sbjct: 324 tgttcgaacgctcaaccctgaacaggctgattggttctatgcccctgtttacactacttg 383 Query: 374 tgatcttactcctgctggtcttcccttgccattcaagtcaccacgggtgatgaggagtgc 433 |||| | |||| |||||| ||||| |||||||||||||| || || ||||| |||| || Sbjct: 384 tgatttgactcatgctggacttccattgccattcaagtctcctaggatgatgcggagcgc 443 Query: 434 aattcagtatatttcgcataaatggcccttttggaaccgaactgatggcgcagatcactt 493 ||| |||| | |||| |||||||| || ||||| |||||||||| |||||||| || Sbjct: 444 aatccagtttctttcaagaaaatggccattctggaatagaactgatggagcagatcattt 503 Query: 494 ctttgttgtcccacatgactttggggcttgctttcattatcaggaagaaaaagctattga 553 ||||||||| |||||||| |||||||| |||||||| ||||||||||| ||||||||||| Sbjct: 504 ctttgttgttccacatgattttggggcatgctttcactatcaggaagagaaagctattga 563 Query: 554 acgtggcattctcccattgctgcgacgcgctacattggtgcagacatttggacaggagaa 613 ||||| || || |||||||| || || || |||||||| || || ||||||||| |||| Sbjct: 564 gcgtgggatacttccattgctccgccgtgccacattggttcaaacttttggacagaagaa 623 Query: 614 tcatgt 619 ||||| Sbjct: 624 ccatgt 629
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 256 bits (129), Expect = 8e-65 Identities = 327/393 (83%) Strand = Plus / Minus Query: 145 caggaagtgctggtgatgtgctagaagacaatcctgtgggaaagttaaaggttttcatat 204 |||||||||||||||||||||||||||||||||| || || ||| |||||||| | | Sbjct: 18993926 caggaagtgctggtgatgtgctagaagacaatccagttgggcggttgaaggtttttgttt 18993867 Query: 205 acgacttgccaagaaaatacaacaagaagatggtcaccaaggatccccggtgccttaatc 264 | ||||||||||| || || ||||||| ||| ||| ||||||||||||| ||||| || | Sbjct: 18993866 atgacttgccaagcaagtataacaagaggatagtcgccaaggatccccgatgcctcaacc 18993807 Query: 265 acatgtttgctgcggaaatattcatgcaccgtttcttgctctcaagtgctgtgcgtacac 324 ||||||||||||| || ||||| ||||| |||||||||||||| |||||||| || || | Sbjct: 18993806 acatgtttgctgctgagatatttatgcatcgtttcttgctctctagtgctgttcgaacgc 18993747 Query: 325 tcaaacccaaagaggctgattggttctacacaccagtttataccacgtgtgatcttactc 384 |||| || || |||||||||||||||| | || ||||| || || |||||| | |||| Sbjct: 18993746 tcaaccctgaacaggctgattggttctatgcccctgtttacactacttgtgatttgactc 18993687 Query: 385 ctgctggtcttcccttgccattcaagtcaccacgggtgatgaggagtgcaattcagtata 444 |||||| ||||| |||||||||||||| || || ||||| |||| ||||| |||| | Sbjct: 18993686 atgctggacttccattgccattcaagtctcctaggatgatgcggagcgcaatccagtttc 18993627 Query: 445 tttcgcataaatggcccttttggaaccgaactgatggcgcagatcacttctttgttgtcc 504 |||| |||||||| || ||||| |||||||||| |||||||| ||||||||||| | Sbjct: 18993626 tttcaagaaaatggccattctggaatagaactgatggagcagatcatttctttgttgttc 18993567 Query: 505 cacatgactttggggcttgctttcattatcagg 537 ||||||| |||||||| |||||||| ||||||| Sbjct: 18993566 cacatgattttggggcatgctttcactatcagg 18993534 Score = 60.0 bits (30), Expect = 9e-06 Identities = 72/86 (83%) Strand = Plus / Minus Query: 534 caggaagaaaaagctattgaacgtggcattctcccattgctgcgacgcgctacattggtg 593 |||||||| ||||||||||| ||||| || || |||||||| || || || |||||||| Sbjct: 18993363 caggaagagaaagctattgagcgtgggatacttccattgctccgccgtgccacattggtt 18993304 Query: 594 cagacatttggacaggagaatcatgt 619 || || ||||||||| |||| ||||| Sbjct: 18993303 caaacttttggacagaagaaccatgt 18993278
>dbj|AP005842.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0003H22 Length = 68256 Score = 256 bits (129), Expect = 8e-65 Identities = 327/393 (83%) Strand = Plus / Minus Query: 145 caggaagtgctggtgatgtgctagaagacaatcctgtgggaaagttaaaggttttcatat 204 |||||||||||||||||||||||||||||||||| || || ||| |||||||| | | Sbjct: 49247 caggaagtgctggtgatgtgctagaagacaatccagttgggcggttgaaggtttttgttt 49188 Query: 205 acgacttgccaagaaaatacaacaagaagatggtcaccaaggatccccggtgccttaatc 264 | ||||||||||| || || ||||||| ||| ||| ||||||||||||| ||||| || | Sbjct: 49187 atgacttgccaagcaagtataacaagaggatagtcgccaaggatccccgatgcctcaacc 49128 Query: 265 acatgtttgctgcggaaatattcatgcaccgtttcttgctctcaagtgctgtgcgtacac 324 ||||||||||||| || ||||| ||||| |||||||||||||| |||||||| || || | Sbjct: 49127 acatgtttgctgctgagatatttatgcatcgtttcttgctctctagtgctgttcgaacgc 49068 Query: 325 tcaaacccaaagaggctgattggttctacacaccagtttataccacgtgtgatcttactc 384 |||| || || |||||||||||||||| | || ||||| || || |||||| | |||| Sbjct: 49067 tcaaccctgaacaggctgattggttctatgcccctgtttacactacttgtgatttgactc 49008 Query: 385 ctgctggtcttcccttgccattcaagtcaccacgggtgatgaggagtgcaattcagtata 444 |||||| ||||| |||||||||||||| || || ||||| |||| ||||| |||| | Sbjct: 49007 atgctggacttccattgccattcaagtctcctaggatgatgcggagcgcaatccagtttc 48948 Query: 445 tttcgcataaatggcccttttggaaccgaactgatggcgcagatcacttctttgttgtcc 504 |||| |||||||| || ||||| |||||||||| |||||||| ||||||||||| | Sbjct: 48947 tttcaagaaaatggccattctggaatagaactgatggagcagatcatttctttgttgttc 48888 Query: 505 cacatgactttggggcttgctttcattatcagg 537 ||||||| |||||||| |||||||| ||||||| Sbjct: 48887 cacatgattttggggcatgctttcactatcagg 48855 Score = 60.0 bits (30), Expect = 9e-06 Identities = 72/86 (83%) Strand = Plus / Minus Query: 534 caggaagaaaaagctattgaacgtggcattctcccattgctgcgacgcgctacattggtg 593 |||||||| ||||||||||| ||||| || || |||||||| || || || |||||||| Sbjct: 48684 caggaagagaaagctattgagcgtgggatacttccattgctccgccgtgccacattggtt 48625 Query: 594 cagacatttggacaggagaatcatgt 619 || || ||||||||| |||| ||||| Sbjct: 48624 caaacttttggacagaagaaccatgt 48599
>dbj|AK059806.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-G11, full insert sequence Length = 1146 Score = 238 bits (120), Expect = 2e-59 Identities = 243/284 (85%) Strand = Plus / Plus Query: 340 ctgattggttctacacaccagtttataccacgtgtgatcttactcctgctggtcttccct 399 |||||||||| ||||| ||||||||||| || ||||| || ||||| ||||| || |||| Sbjct: 1 ctgattggttttacacgccagtttatactacttgtgacctaactccggctggactgccct 60 Query: 400 tgccattcaagtcaccacgggtgatgaggagtgcaattcagtatatttcgcataaatggc 459 ||||||| ||||| || |||||||||||||||| || ||||| |||||||| || |||| Sbjct: 61 tgccatttaagtcgccgagggtgatgaggagtgcgatccagtacatttcgcacaagtggc 120 Query: 460 ccttttggaaccgaactgatggcgcagatcacttctttgttgtcccacatgactttgggg 519 |||| ||||| |||| ||||| ||||| ||||||| ||||||||| ||||| ||||| | Sbjct: 121 ccttctggaatagaacagatggagcagaccacttctatgttgtcccgcatgattttggtg 180 Query: 520 cttgctttcattatcaggaagaaaaagctattgaacgtggcattctcccattgctgcgac 579 | || ||||| ||||||||||||||||||||||| ||||| ||||| || ||||||| || Sbjct: 181 catgttttcactatcaggaagaaaaagctattgagcgtggaattctaccgttgctgcaac 240 Query: 580 gcgctacattggtgcagacatttggacaggagaatcatgtttgc 623 | ||||| ||||| || ||||||||||||||||| ||||||||| Sbjct: 241 gtgctacgttggtccaaacatttggacaggagaaccatgtttgc 284
>gb|AY104835.1| Zea mays PCO128889 mRNA sequence Length = 965 Score = 222 bits (112), Expect = 1e-54 Identities = 250/296 (84%) Strand = Plus / Plus Query: 330 cccaaagaggctgattggttctacacaccagtttataccacgtgtgatcttactcctgct 389 ||||| || |||||||||||||| ||||||||||| || || || ||| | ||| ||| Sbjct: 14 cccaaggaagctgattggttctatacaccagtttacactacttgcgatttaactaacgct 73 Query: 390 ggtcttcccttgccattcaagtcaccacgggtgatgaggagtgcaattcagtatatttcg 449 || || |||||||| || ||||||||||||||||||||||| || || || |||||||| Sbjct: 74 ggactgcccttgccgtttaagtcaccacgggtgatgaggagcgcgatccaatatatttca 133 Query: 450 cataaatggcccttttggaaccgaactgatggcgcagatcacttctttgttgtcccacat 509 | ||||||||||| ||||| | |||||||| |||||||| ||||| ||||| || ||| Sbjct: 134 aacaaatggcccttctggaataggactgatggagcagatcatttcttcgttgttccgcat 193 Query: 510 gactttggggcttgctttcattatcaggaagaaaaagctattgaacgtggcattctccca 569 || |||| || ||||| || |||||||||||||||||||| || ||||| ||||| ||| Sbjct: 194 gattttgcagcatgcttccactatcaggaagaaaaagctatcgagcgtggaattcttcca 253 Query: 570 ttgctgcgacgcgctacattggtgcagacatttggacaggagaatcatgtttgcct 625 ||||||||||| ||||||||||| || || |||||||||||||||||||||||||| Sbjct: 254 ttgctgcgacgtgctacattggtccaaacctttggacaggagaatcatgtttgcct 309
>ref|XM_463682.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1248 Score = 109 bits (55), Expect = 1e-20 Identities = 229/287 (79%) Strand = Plus / Plus Query: 339 gctgattggttctacacaccagtttataccacgtgtgatcttactcctgctggtcttccc 398 |||||||||||||| || ||||| || || ||||| ||||||||||| |||| |||| Sbjct: 295 gctgattggttctatactccagtatacacgacgtgcgatcttactccatggggtcatccc 354 Query: 399 ttgccattcaagtcaccacgggtgatgaggagtgcaattcagtatatttcgcataaatgg 458 ||||| |||||||| ||| || | ||||| ||||||||||||| ||||| | ||| Sbjct: 355 ttgcccttcaagtctccaaggattatgagaagtgcaattcagttcatttcctcgcattgg 414 Query: 459 cccttttggaaccgaactgatggcgcagatcacttctttgttgtcccacatgactttggg 518 |||| ||||||| | || ||||| ||||| || ||||||||||| |||||||| || || Sbjct: 415 ccctattggaacaggacagatggggcagaccatttctttgttgtgccacatgatttcgga 474 Query: 519 gcttgctttcattatcaggaagaaaaagctattgaacgtggcattctcccattgctgcga 578 || ||||| |||||||||||||| || || ||||| || || || || |||||||| || Sbjct: 475 gcatgcttccattatcaggaagagaaggccattgagcggggaatcctgccattgcttcgc 534 Query: 579 cgcgctacattggtgcagacatttggacaggagaatcatgtttgcct 625 || || || |||| ||||| ||||| ||| || ||||||| ||||| Sbjct: 535 cgtgcgacgctggtccagacttttgggcagaaggatcatgtctgcct 581 Score = 44.1 bits (22), Expect = 0.55 Identities = 61/74 (82%) Strand = Plus / Plus Query: 219 aaatacaacaagaagatggtcaccaaggatccccggtgccttaatcacatgtttgctgcg 278 |||||||||||||||||||| | || ||| || | ||||| | |||||||||||||| Sbjct: 175 aaatacaacaagaagatggtggcaaaagattccagatgcctcagccacatgtttgctgca 234 Query: 279 gaaatattcatgca 292 || || |||||||| Sbjct: 235 gagattttcatgca 248
>dbj|AK068465.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013156C14, full insert sequence Length = 1739 Score = 109 bits (55), Expect = 1e-20 Identities = 229/287 (79%) Strand = Plus / Plus Query: 339 gctgattggttctacacaccagtttataccacgtgtgatcttactcctgctggtcttccc 398 |||||||||||||| || ||||| || || ||||| ||||||||||| |||| |||| Sbjct: 435 gctgattggttctatactccagtatacacgacgtgcgatcttactccatggggtcatccc 494 Query: 399 ttgccattcaagtcaccacgggtgatgaggagtgcaattcagtatatttcgcataaatgg 458 ||||| |||||||| ||| || | ||||| ||||||||||||| ||||| | ||| Sbjct: 495 ttgcccttcaagtctccaaggattatgagaagtgcaattcagttcatttcctcgcattgg 554 Query: 459 cccttttggaaccgaactgatggcgcagatcacttctttgttgtcccacatgactttggg 518 |||| ||||||| | || ||||| ||||| || ||||||||||| |||||||| || || Sbjct: 555 ccctattggaacaggacagatggggcagaccatttctttgttgtgccacatgatttcgga 614 Query: 519 gcttgctttcattatcaggaagaaaaagctattgaacgtggcattctcccattgctgcga 578 || ||||| |||||||||||||| || || ||||| || || || || |||||||| || Sbjct: 615 gcatgcttccattatcaggaagagaaggccattgagcggggaatcctgccattgcttcgc 674 Query: 579 cgcgctacattggtgcagacatttggacaggagaatcatgtttgcct 625 || || || |||| ||||| ||||| ||| || ||||||| ||||| Sbjct: 675 cgtgcgacgctggtccagacttttgggcagaaggatcatgtctgcct 721 Score = 44.1 bits (22), Expect = 0.55 Identities = 61/74 (82%) Strand = Plus / Plus Query: 219 aaatacaacaagaagatggtcaccaaggatccccggtgccttaatcacatgtttgctgcg 278 |||||||||||||||||||| | || ||| || | ||||| | |||||||||||||| Sbjct: 315 aaatacaacaagaagatggtggcaaaagattccagatgcctcagccacatgtttgctgca 374 Query: 279 gaaatattcatgca 292 || || |||||||| Sbjct: 375 gagattttcatgca 388
>ref|NM_102508.2| Arabidopsis thaliana catalytic AT1G27440 mRNA, complete cds Length = 1525 Score = 93.7 bits (47), Expect = 7e-16 Identities = 80/91 (87%) Strand = Plus / Plus Query: 464 ttggaaccgaactgatggcgcagatcacttctttgttgtcccacatgactttggggcttg 523 |||||| || ||||| || || ||||||||||||||||| || ||||||||||| ||||| Sbjct: 573 ttggaatcggactgaaggagctgatcacttctttgttgtgccccatgactttggagcttg 632 Query: 524 ctttcattatcaggaagaaaaagctattgaa 554 ||| ||||||||||| |||||||| |||||| Sbjct: 633 cttccattatcaggaggaaaaagccattgaa 663 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 135 gagcgcatctcaggaagtgctggtgatgt 163 ||||| || |||||||||||||||||||| Sbjct: 244 gagcgaatttcaggaagtgctggtgatgt 272
>gb|BT025555.1| Arabidopsis thaliana At1g27440 mRNA, complete cds Length = 1239 Score = 93.7 bits (47), Expect = 7e-16 Identities = 80/91 (87%) Strand = Plus / Plus Query: 464 ttggaaccgaactgatggcgcagatcacttctttgttgtcccacatgactttggggcttg 523 |||||| || ||||| || || ||||||||||||||||| || ||||||||||| ||||| Sbjct: 411 ttggaatcggactgaaggagctgatcacttctttgttgtgccccatgactttggagcttg 470 Query: 524 ctttcattatcaggaagaaaaagctattgaa 554 ||| ||||||||||| |||||||| |||||| Sbjct: 471 cttccattatcaggaggaaaaagccattgaa 501 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 135 gagcgcatctcaggaagtgctggtgatgt 163 ||||| || |||||||||||||||||||| Sbjct: 82 gagcgaatttcaggaagtgctggtgatgt 110
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 93.7 bits (47), Expect = 7e-16 Identities = 161/199 (80%) Strand = Plus / Minus Query: 339 gctgattggttctacacaccagtttataccacgtgtgatcttactcctgctggtcttccc 398 |||||||||||||| || ||||| || || ||||| ||||||||||| |||| |||| Sbjct: 40620375 gctgattggttctatactccagtatacacgacgtgcgatcttactccatggggtcatccc 40620316 Query: 399 ttgccattcaagtcaccacgggtgatgaggagtgcaattcagtatatttcgcataaatgg 458 ||||| |||||||| ||| || | ||||| ||||||||||||| ||||| | ||| Sbjct: 40620315 ttgcccttcaagtctccaaggattatgagaagtgcaattcagttcatttcctcgcattgg 40620256 Query: 459 cccttttggaaccgaactgatggcgcagatcacttctttgttgtcccacatgactttggg 518 |||| ||||||| | || ||||| ||||| || ||||||||||| |||||||| || || Sbjct: 40620255 ccctattggaacaggacagatggggcagaccatttctttgttgtgccacatgatttcgga 40620196 Query: 519 gcttgctttcattatcagg 537 || ||||| |||||||||| Sbjct: 40620195 gcatgcttccattatcagg 40620177 Score = 58.0 bits (29), Expect = 4e-05 Identities = 155/197 (78%) Strand = Plus / Minus Query: 213 ccaagaaaatacaacaagaagatggtcaccaaggatccccggtgccttaatcacatgttt 272 ||||| || |||||||||||| || | | |||||||| ||||||| || ||||||||| Sbjct: 40627357 ccaagcaagtacaacaagaagctgctgaagaaggatcctaggtgcctgaaccacatgttt 40627298 Query: 273 gctgcggaaatattcatgcaccgtttcttgctctcaagtgctgtgcgtacactcaaaccc 332 || || || || |||||||| || ||| || | ||||| ||||| || || | || ||| Sbjct: 40627297 gccgctgagattttcatgcatcggttcctgttgtcaagcgctgtccgaacttttaatccc 40627238 Query: 333 aaagaggctgattggttctacacaccagtttataccacgtgtgatcttactcctgctggt 392 | || |||||||||||||||||||| || || || || || || || ||||| | ||| Sbjct: 40627237 gaggaagctgattggttctacacaccggtgtacactacatgcgacctgactccctccggt 40627178 Query: 393 cttcccttgccattcaa 409 ||||||||||| ||||| Sbjct: 40627177 cttcccttgcccttcaa 40627161 Score = 48.1 bits (24), Expect = 0.035 Identities = 45/52 (86%) Strand = Plus / Minus Query: 486 gatcacttctttgttgtcccacatgactttggggcttgctttcattatcagg 537 ||||| ||||||||| |||||||||||||| |||||||| || ||||||| Sbjct: 40627084 gatcatttctttgttacaccacatgactttggcgcttgcttccactatcagg 40627033 Score = 44.1 bits (22), Expect = 0.55 Identities = 37/42 (88%) Strand = Plus / Minus Query: 533 tcaggaagaaaaagctattgaacgtggcattctcccattgct 574 |||||||||||| || |||| |||||| || ||||||||||| Sbjct: 40626603 tcaggaagaaaaggcaattggacgtggaatcctcccattgct 40626562 Score = 44.1 bits (22), Expect = 0.55 Identities = 61/74 (82%) Strand = Plus / Minus Query: 219 aaatacaacaagaagatggtcaccaaggatccccggtgccttaatcacatgtttgctgcg 278 |||||||||||||||||||| | || ||| || | ||||| | |||||||||||||| Sbjct: 40620495 aaatacaacaagaagatggtggcaaaagattccagatgcctcagccacatgtttgctgca 40620436 Query: 279 gaaatattcatgca 292 || || |||||||| Sbjct: 40620435 gagattttcatgca 40620422 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 145 caggaagtgctggtgatgtg 164 |||||||||||||||||||| Sbjct: 40627425 caggaagtgctggtgatgtg 40627406
>gb|BT022053.1| Arabidopsis thaliana At1g27440 gene, complete cds Length = 1424 Score = 93.7 bits (47), Expect = 7e-16 Identities = 80/91 (87%) Strand = Plus / Plus Query: 464 ttggaaccgaactgatggcgcagatcacttctttgttgtcccacatgactttggggcttg 523 |||||| || ||||| || || ||||||||||||||||| || ||||||||||| ||||| Sbjct: 528 ttggaatcggactgaaggagctgatcacttctttgttgtgccccatgactttggagcttg 587 Query: 524 ctttcattatcaggaagaaaaagctattgaa 554 ||| ||||||||||| |||||||| |||||| Sbjct: 588 cttccattatcaggaggaaaaagccattgaa 618 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 135 gagcgcatctcaggaagtgctggtgatgt 163 ||||| || |||||||||||||||||||| Sbjct: 199 gagcgaatttcaggaagtgctggtgatgt 227
>dbj|AP004332.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0093F16 Length = 160925 Score = 93.7 bits (47), Expect = 7e-16 Identities = 161/199 (80%) Strand = Plus / Minus Query: 339 gctgattggttctacacaccagtttataccacgtgtgatcttactcctgctggtcttccc 398 |||||||||||||| || ||||| || || ||||| ||||||||||| |||| |||| Sbjct: 62353 gctgattggttctatactccagtatacacgacgtgcgatcttactccatggggtcatccc 62294 Query: 399 ttgccattcaagtcaccacgggtgatgaggagtgcaattcagtatatttcgcataaatgg 458 ||||| |||||||| ||| || | ||||| ||||||||||||| ||||| | ||| Sbjct: 62293 ttgcccttcaagtctccaaggattatgagaagtgcaattcagttcatttcctcgcattgg 62234 Query: 459 cccttttggaaccgaactgatggcgcagatcacttctttgttgtcccacatgactttggg 518 |||| ||||||| | || ||||| ||||| || ||||||||||| |||||||| || || Sbjct: 62233 ccctattggaacaggacagatggggcagaccatttctttgttgtgccacatgatttcgga 62174 Query: 519 gcttgctttcattatcagg 537 || ||||| |||||||||| Sbjct: 62173 gcatgcttccattatcagg 62155 Score = 58.0 bits (29), Expect = 4e-05 Identities = 155/197 (78%) Strand = Plus / Minus Query: 213 ccaagaaaatacaacaagaagatggtcaccaaggatccccggtgccttaatcacatgttt 272 ||||| || |||||||||||| || | | |||||||| ||||||| || ||||||||| Sbjct: 69335 ccaagcaagtacaacaagaagctgctgaagaaggatcctaggtgcctgaaccacatgttt 69276 Query: 273 gctgcggaaatattcatgcaccgtttcttgctctcaagtgctgtgcgtacactcaaaccc 332 || || || || |||||||| || ||| || | ||||| ||||| || || | || ||| Sbjct: 69275 gccgctgagattttcatgcatcggttcctgttgtcaagcgctgtccgaacttttaatccc 69216 Query: 333 aaagaggctgattggttctacacaccagtttataccacgtgtgatcttactcctgctggt 392 | || |||||||||||||||||||| || || || || || || || ||||| | ||| Sbjct: 69215 gaggaagctgattggttctacacaccggtgtacactacatgcgacctgactccctccggt 69156 Query: 393 cttcccttgccattcaa 409 ||||||||||| ||||| Sbjct: 69155 cttcccttgcccttcaa 69139 Score = 48.1 bits (24), Expect = 0.035 Identities = 45/52 (86%) Strand = Plus / Minus Query: 486 gatcacttctttgttgtcccacatgactttggggcttgctttcattatcagg 537 ||||| ||||||||| |||||||||||||| |||||||| || ||||||| Sbjct: 69062 gatcatttctttgttacaccacatgactttggcgcttgcttccactatcagg 69011 Score = 44.1 bits (22), Expect = 0.55 Identities = 37/42 (88%) Strand = Plus / Minus Query: 533 tcaggaagaaaaagctattgaacgtggcattctcccattgct 574 |||||||||||| || |||| |||||| || ||||||||||| Sbjct: 68581 tcaggaagaaaaggcaattggacgtggaatcctcccattgct 68540 Score = 44.1 bits (22), Expect = 0.55 Identities = 61/74 (82%) Strand = Plus / Minus Query: 219 aaatacaacaagaagatggtcaccaaggatccccggtgccttaatcacatgtttgctgcg 278 |||||||||||||||||||| | || ||| || | ||||| | |||||||||||||| Sbjct: 62473 aaatacaacaagaagatggtggcaaaagattccagatgcctcagccacatgtttgctgca 62414 Query: 279 gaaatattcatgca 292 || || |||||||| Sbjct: 62413 gagattttcatgca 62400 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 145 caggaagtgctggtgatgtg 164 |||||||||||||||||||| Sbjct: 69403 caggaagtgctggtgatgtg 69384
>dbj|AP003262.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0482D04 Length = 144583 Score = 93.7 bits (47), Expect = 7e-16 Identities = 161/199 (80%) Strand = Plus / Minus Query: 339 gctgattggttctacacaccagtttataccacgtgtgatcttactcctgctggtcttccc 398 |||||||||||||| || ||||| || || ||||| ||||||||||| |||| |||| Sbjct: 100390 gctgattggttctatactccagtatacacgacgtgcgatcttactccatggggtcatccc 100331 Query: 399 ttgccattcaagtcaccacgggtgatgaggagtgcaattcagtatatttcgcataaatgg 458 ||||| |||||||| ||| || | ||||| ||||||||||||| ||||| | ||| Sbjct: 100330 ttgcccttcaagtctccaaggattatgagaagtgcaattcagttcatttcctcgcattgg 100271 Query: 459 cccttttggaaccgaactgatggcgcagatcacttctttgttgtcccacatgactttggg 518 |||| ||||||| | || ||||| ||||| || ||||||||||| |||||||| || || Sbjct: 100270 ccctattggaacaggacagatggggcagaccatttctttgttgtgccacatgatttcgga 100211 Query: 519 gcttgctttcattatcagg 537 || ||||| |||||||||| Sbjct: 100210 gcatgcttccattatcagg 100192 Score = 58.0 bits (29), Expect = 4e-05 Identities = 155/197 (78%) Strand = Plus / Minus Query: 213 ccaagaaaatacaacaagaagatggtcaccaaggatccccggtgccttaatcacatgttt 272 ||||| || |||||||||||| || | | |||||||| ||||||| || ||||||||| Sbjct: 107372 ccaagcaagtacaacaagaagctgctgaagaaggatcctaggtgcctgaaccacatgttt 107313 Query: 273 gctgcggaaatattcatgcaccgtttcttgctctcaagtgctgtgcgtacactcaaaccc 332 || || || || |||||||| || ||| || | ||||| ||||| || || | || ||| Sbjct: 107312 gccgctgagattttcatgcatcggttcctgttgtcaagcgctgtccgaacttttaatccc 107253 Query: 333 aaagaggctgattggttctacacaccagtttataccacgtgtgatcttactcctgctggt 392 | || |||||||||||||||||||| || || || || || || || ||||| | ||| Sbjct: 107252 gaggaagctgattggttctacacaccggtgtacactacatgcgacctgactccctccggt 107193 Query: 393 cttcccttgccattcaa 409 ||||||||||| ||||| Sbjct: 107192 cttcccttgcccttcaa 107176 Score = 48.1 bits (24), Expect = 0.035 Identities = 45/52 (86%) Strand = Plus / Minus Query: 486 gatcacttctttgttgtcccacatgactttggggcttgctttcattatcagg 537 ||||| ||||||||| |||||||||||||| |||||||| || ||||||| Sbjct: 107099 gatcatttctttgttacaccacatgactttggcgcttgcttccactatcagg 107048 Score = 44.1 bits (22), Expect = 0.55 Identities = 37/42 (88%) Strand = Plus / Minus Query: 533 tcaggaagaaaaagctattgaacgtggcattctcccattgct 574 |||||||||||| || |||| |||||| || ||||||||||| Sbjct: 106618 tcaggaagaaaaggcaattggacgtggaatcctcccattgct 106577 Score = 44.1 bits (22), Expect = 0.55 Identities = 61/74 (82%) Strand = Plus / Minus Query: 219 aaatacaacaagaagatggtcaccaaggatccccggtgccttaatcacatgtttgctgcg 278 |||||||||||||||||||| | || ||| || | ||||| | |||||||||||||| Sbjct: 100510 aaatacaacaagaagatggtggcaaaagattccagatgcctcagccacatgtttgctgca 100451 Query: 279 gaaatattcatgca 292 || || |||||||| Sbjct: 100450 gagattttcatgca 100437 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 145 caggaagtgctggtgatgtg 164 |||||||||||||||||||| Sbjct: 107440 caggaagtgctggtgatgtg 107421
>gb|AY596523.1| Saccharum officinarum clone SCQGLR1019H07, complete sequence Length = 1928 Score = 83.8 bits (42), Expect = 6e-13 Identities = 204/258 (79%) Strand = Plus / Plus Query: 141 atctcaggaagtgctggtgatgtgctagaagacaatcctgtgggaaagttaaaggttttc 200 |||||||| ||||||||||| ||| ||||||| || ||||| || | | | ||||||| | Sbjct: 504 atctcagggagtgctggtgacgtgttagaagataaccctgttgggaggctcaaggtttac 563 Query: 201 atatacgacttgccaagaaaatacaacaagaagatggtcaccaaggatccccggtgcctt 260 | || || | || || ||||||||||||||| || | | |||||||| ||||||| Sbjct: 564 gtctatgatctccccagtaaatacaacaagaagctgctgaagaaggatcctaggtgcctc 623 Query: 261 aatcacatgtttgctgcggaaatattcatgcaccgtttcttgctctcaagtgctgtgcgt 320 || ||||||||||||||||| || ||||||||||| ||| || | || || ||||| || Sbjct: 624 aaccacatgtttgctgcggagatcttcatgcaccggttcctgttgtcgagcgctgtccga 683 Query: 321 acactcaaacccaaagaggctgattggttctacacaccagtttataccacgtgtgatctt 380 || | || || |||| || |||||||||||||| || || || ||||| |||||||| Sbjct: 684 acttttaatccggaagaagcggattggttctacacgcccgtgtacaccacatgtgatctg 743 Query: 381 actcctgctggtcttccc 398 |||||| | ||||||||| Sbjct: 744 actccttcgggtcttccc 761 Score = 69.9 bits (35), Expect = 1e-08 Identities = 116/143 (81%) Strand = Plus / Plus Query: 483 gcagatcacttctttgttgtcccacatgactttggggcttgctttcattatcaggaagaa 542 |||||||| |||||||| |||||||||||||| |||||||| |||||||||||||| Sbjct: 846 gcagatcatttctttgtcacaccacatgactttggtgcttgcttccattatcaggaagag 905 Query: 543 aaagctattgaacgtggcattctcccattgctgcgacgcgctacattggtgcagacattt 602 ||||| || | ||| || || || || ||||| | || ||||| |||| ||||| ||| Sbjct: 906 aaagcaatcggacggggaatccttcccttgcttcagcgtgctacgctggttcagaccttt 965 Query: 603 ggacaggagaatcatgtttgcct 625 |||||| |||| ||||| ||||| Sbjct: 966 ggacagaagaaccatgtctgcct 988
>ref|XM_463683.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1254 Score = 81.8 bits (41), Expect = 3e-12 Identities = 77/89 (86%) Strand = Plus / Plus Query: 486 gatcacttctttgttgtcccacatgactttggggcttgctttcattatcaggaagaaaaa 545 ||||| ||||||||| |||||||||||||| |||||||| || |||||||||||||| Sbjct: 448 gatcatttctttgttacaccacatgactttggcgcttgcttccactatcaggaagaaaag 507 Query: 546 gctattgaacgtggcattctcccattgct 574 || |||| |||||| || ||||||||||| Sbjct: 508 gcaattggacgtggaatcctcccattgct 536 Score = 58.0 bits (29), Expect = 4e-05 Identities = 155/197 (78%) Strand = Plus / Plus Query: 213 ccaagaaaatacaacaagaagatggtcaccaaggatccccggtgccttaatcacatgttt 272 ||||| || |||||||||||| || | | |||||||| ||||||| || ||||||||| Sbjct: 175 ccaagcaagtacaacaagaagctgctgaagaaggatcctaggtgcctgaaccacatgttt 234 Query: 273 gctgcggaaatattcatgcaccgtttcttgctctcaagtgctgtgcgtacactcaaaccc 332 || || || || |||||||| || ||| || | ||||| ||||| || || | || ||| Sbjct: 235 gccgctgagattttcatgcatcggttcctgttgtcaagcgctgtccgaacttttaatccc 294 Query: 333 aaagaggctgattggttctacacaccagtttataccacgtgtgatcttactcctgctggt 392 | || |||||||||||||||||||| || || || || || || || ||||| | ||| Sbjct: 295 gaggaagctgattggttctacacaccggtgtacactacatgcgacctgactccctccggt 354 Query: 393 cttcccttgccattcaa 409 ||||||||||| ||||| Sbjct: 355 cttcccttgcccttcaa 371 Score = 48.1 bits (24), Expect = 0.035 Identities = 24/24 (100%) Strand = Plus / Plus Query: 141 atctcaggaagtgctggtgatgtg 164 |||||||||||||||||||||||| Sbjct: 103 atctcaggaagtgctggtgatgtg 126
>emb|BX814611.1|CNS0ADM0 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB84ZD11 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1526 Score = 79.8 bits (40), Expect = 1e-11 Identities = 70/80 (87%) Strand = Plus / Plus Query: 464 ttggaaccgaactgatggcgcagatcacttctttgttgtcccacatgactttggggcttg 523 |||||| || ||||| || || ||||||||||||||||| || ||||||||||| ||||| Sbjct: 573 ttggaatcggactgaaggagctgatcacttctttgttgtgccccatgactttggagcttg 632 Query: 524 ctttcattatcaggaagaaa 543 ||| ||||||||||| |||| Sbjct: 633 cttccattatcaggaggaaa 652 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 135 gagcgcatctcaggaagtgctggtgatgt 163 ||||| || |||||||||||||||||||| Sbjct: 244 gagcgaatttcaggaagtgctggtgatgt 272
>gb|AC004557.2|AC004557 Genomic sequence for Arabidopsis thaliana BAC F17L21 from chromosome I, complete sequence Length = 99690 Score = 75.8 bits (38), Expect = 2e-10 Identities = 65/74 (87%) Strand = Plus / Minus Query: 464 ttggaaccgaactgatggcgcagatcacttctttgttgtcccacatgactttggggcttg 523 |||||| || ||||| || || ||||||||||||||||| || ||||||||||| ||||| Sbjct: 74477 ttggaatcggactgaaggagctgatcacttctttgttgtgccccatgactttggagcttg 74418 Query: 524 ctttcattatcagg 537 ||| |||||||||| Sbjct: 74417 cttccattatcagg 74404
>ref|NM_125578.2| Arabidopsis thaliana catalytic AT5G61840 mRNA, complete cds Length = 1672 Score = 73.8 bits (37), Expect = 6e-10 Identities = 115/141 (81%) Strand = Plus / Plus Query: 483 gcagatcacttctttgttgtcccacatgactttggggcttgctttcattatcaggaagaa 542 ||||| |||||||||||||| || ||||||||||| || || || |||||||| ||||| Sbjct: 676 gcagaccacttctttgttgtgcctcatgactttggagcctgtttccattatcaagaagag 735 Query: 543 aaagctattgaacgtggcattctcccattgctgcgacgcgctacattggtgcagacattt 602 || || || | | | || || || || ||||| | ||| |||||| |||||||||||||| Sbjct: 736 aaggcaataggaagaggaatactacccttgcttcaacgagctacactggtgcagacattt 795 Query: 603 ggacaggagaatcatgtttgc 623 ||||| ||||||||||||| Sbjct: 796 ggacaaaggaatcatgtttgc 816 Score = 40.1 bits (20), Expect = 8.5 Identities = 44/52 (84%) Strand = Plus / Plus Query: 135 gagcgcatctcaggaagtgctggtgatgtgctagaagacaatcctgtgggaa 186 ||||| || ||||| ||||||||||||||| | ||||| |||| ||||||| Sbjct: 328 gagcgaatttcaggtagtgctggtgatgtgttggaagatgatcccgtgggaa 379
>gb|BT018089.1| Zea mays clone EL01N0552D06.c mRNA sequence Length = 1163 Score = 73.8 bits (37), Expect = 6e-10 Identities = 40/41 (97%) Strand = Plus / Plus Query: 507 catgactttggggcttgctttcattatcaggaagaaaaagc 547 ||||||||||| ||||||||||||||||||||||||||||| Sbjct: 91 catgactttggtgcttgctttcattatcaggaagaaaaagc 131
>gb|AY066039.1| Arabidopsis thaliana AT5g61840/mac9_140 mRNA, complete cds Length = 1248 Score = 73.8 bits (37), Expect = 6e-10 Identities = 115/141 (81%) Strand = Plus / Plus Query: 483 gcagatcacttctttgttgtcccacatgactttggggcttgctttcattatcaggaagaa 542 ||||| |||||||||||||| || ||||||||||| || || || |||||||| ||||| Sbjct: 439 gcagaccacttctttgttgtgcctcatgactttggagcctgtttccattatcaagaagag 498 Query: 543 aaagctattgaacgtggcattctcccattgctgcgacgcgctacattggtgcagacattt 602 || || || | | | || || || || ||||| | ||| |||||| |||||||||||||| Sbjct: 499 aaggcaataggaagaggaatactacccttgcttcaacgagctacactggtgcagacattt 558 Query: 603 ggacaggagaatcatgtttgc 623 ||||| ||||||||||||| Sbjct: 559 ggacaaaggaatcatgtttgc 579 Score = 40.1 bits (20), Expect = 8.5 Identities = 44/52 (84%) Strand = Plus / Plus Query: 135 gagcgcatctcaggaagtgctggtgatgtgctagaagacaatcctgtgggaa 186 ||||| || ||||| ||||||||||||||| | ||||| |||| ||||||| Sbjct: 91 gagcgaatttcaggtagtgctggtgatgtgttggaagatgatcccgtgggaa 142
>gb|AY054180.1| Arabidopsis thaliana AT5g61840/mac9_140 mRNA, complete cds Length = 1664 Score = 73.8 bits (37), Expect = 6e-10 Identities = 115/141 (81%) Strand = Plus / Plus Query: 483 gcagatcacttctttgttgtcccacatgactttggggcttgctttcattatcaggaagaa 542 ||||| |||||||||||||| || ||||||||||| || || || |||||||| ||||| Sbjct: 670 gcagaccacttctttgttgtgcctcatgactttggagcctgtttccattatcaagaagag 729 Query: 543 aaagctattgaacgtggcattctcccattgctgcgacgcgctacattggtgcagacattt 602 || || || | | | || || || || ||||| | ||| |||||| |||||||||||||| Sbjct: 730 aaggcaataggaagaggaatactacccttgcttcaacgagctacactggtgcagacattt 789 Query: 603 ggacaggagaatcatgtttgc 623 ||||| ||||||||||||| Sbjct: 790 ggacaaaggaatcatgtttgc 810 Score = 40.1 bits (20), Expect = 8.5 Identities = 44/52 (84%) Strand = Plus / Plus Query: 135 gagcgcatctcaggaagtgctggtgatgtgctagaagacaatcctgtgggaa 186 ||||| || ||||| ||||||||||||||| | ||||| |||| ||||||| Sbjct: 322 gagcgaatttcaggtagtgctggtgatgtgttggaagatgatcccgtgggaa 373
>dbj|AB080693.1| Arabidopsis thaliana AtGUT1 mRNA for NpGUT1 homolog, complete cds Length = 1026 Score = 73.8 bits (37), Expect = 6e-10 Identities = 115/141 (81%) Strand = Plus / Plus Query: 483 gcagatcacttctttgttgtcccacatgactttggggcttgctttcattatcaggaagaa 542 ||||| |||||||||||||| || ||||||||||| || || || |||||||| ||||| Sbjct: 217 gcagaccacttctttgttgtgcctcatgactttggagcctgtttccattatcaagaagag 276 Query: 543 aaagctattgaacgtggcattctcccattgctgcgacgcgctacattggtgcagacattt 602 || || || | | | || || || || ||||| | ||| |||||| |||||||||||||| Sbjct: 277 aaggcaataggaagaggaatactacccttgcttcaacgagctacactggtgcagacattt 336 Query: 603 ggacaggagaatcatgtttgc 623 ||||| ||||||||||||| Sbjct: 337 ggacaaaggaatcatgtttgc 357
>dbj|AB080676.1| Nicotiana plumbaginifolia NpGUT1 mRNA for pectin-glucuronyltransferase, complete cds Length = 1280 Score = 69.9 bits (35), Expect = 1e-08 Identities = 80/95 (84%) Strand = Plus / Plus Query: 513 tttggggcttgctttcattatcaggaagaaaaagctattgaacgtggcattctcccattg 572 ||||| ||||| ||||| ||||| ||||||||||||||||| | || ||||| |||||| Sbjct: 247 tttggtgcttgttttcactatcaagaagaaaaagctattgagaggggaattcttccattg 306 Query: 573 ctgcgacgcgctacattggtgcagacatttggaca 607 |||| ||| ||||| ||||| || || |||||||| Sbjct: 307 ctgcaacgtgctaccttggttcaaacttttggaca 341 Score = 54.0 bits (27), Expect = 6e-04 Identities = 78/95 (82%) Strand = Plus / Plus Query: 342 gattggttctacacaccagtttataccacgtgtgatcttactcctgctggtcttcccttg 401 ||||||||||| || || ||||| ||||| ||||| || || || ||| |||||||| Sbjct: 76 gattggttctatacccctgtttacaccacttgtgacctgacaccgaatggccttccctta 135 Query: 402 ccattcaagtcaccacgggtgatgaggagtgcaat 436 || || ||||||||||| |||||||||||||||| Sbjct: 136 ccgtttaagtcaccacgtatgatgaggagtgcaat 170
>emb|BX831082.1|CNS0A0UL Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS56ZD10 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1651 Score = 65.9 bits (33), Expect = 1e-07 Identities = 114/141 (80%) Strand = Plus / Plus Query: 483 gcagatcacttctttgttgtcccacatgactttggggcttgctttcattatcaggaagaa 542 ||||| |||||||||||||| || ||||||||||| | || || |||||||| ||||| Sbjct: 656 gcagaccacttctttgttgtgcctcatgactttggagtctgtttccattatcaagaagag 715 Query: 543 aaagctattgaacgtggcattctcccattgctgcgacgcgctacattggtgcagacattt 602 || || || | | | || || || || ||||| | ||| |||||| |||||||||||||| Sbjct: 716 aaggcaataggaagaggaatactacccttgcttcaacgagctacactggtgcagacattt 775 Query: 603 ggacaggagaatcatgtttgc 623 ||||| ||||||||||||| Sbjct: 776 ggacaaaggaatcatgtttgc 796 Score = 40.1 bits (20), Expect = 8.5 Identities = 44/52 (84%) Strand = Plus / Plus Query: 135 gagcgcatctcaggaagtgctggtgatgtgctagaagacaatcctgtgggaa 186 ||||| || ||||| ||||||||||||||| | ||||| |||| ||||||| Sbjct: 308 gagcgaatttcaggtagtgctggtgatgtgttggaagatgatcccgtgggaa 359
>gb|AY087390.1| Arabidopsis thaliana clone 34861 mRNA, complete sequence Length = 1670 Score = 65.9 bits (33), Expect = 1e-07 Identities = 114/141 (80%) Strand = Plus / Plus Query: 483 gcagatcacttctttgttgtcccacatgactttggggcttgctttcattatcaggaagaa 542 ||||| |||||||||||||| || ||||||||| | || || || |||||||| ||||| Sbjct: 676 gcagaccacttctttgttgtgcctcatgactttagagcctgtttccattatcaagaagag 735 Query: 543 aaagctattgaacgtggcattctcccattgctgcgacgcgctacattggtgcagacattt 602 || || || | | | || || || || ||||| | ||| |||||| |||||||||||||| Sbjct: 736 aaggcaataggaagaggaatactacccttgcttcaacgagctacactggtgcagacattt 795 Query: 603 ggacaggagaatcatgtttgc 623 ||||| ||||||||||||| Sbjct: 796 ggacaaaggaatcatgtttgc 816 Score = 40.1 bits (20), Expect = 8.5 Identities = 44/52 (84%) Strand = Plus / Plus Query: 135 gagcgcatctcaggaagtgctggtgatgtgctagaagacaatcctgtgggaa 186 ||||| || ||||| ||||||||||||||| | ||||| |||| ||||||| Sbjct: 328 gagcgaatttcaggtagtgctggtgatgtgttggaagatgatcccgtgggaa 379
>dbj|AB128823.1| Nicotiana tabacum NtGUT1 gene for NpGUT1 homolog, partial cds Length = 1111 Score = 58.0 bits (29), Expect = 4e-05 Identities = 83/101 (82%) Strand = Plus / Plus Query: 507 catgactttggggcttgctttcattatcaggaagaaaaagctattgaacgtggcattctc 566 ||||| ||||| ||||| ||||| ||||| ||||||||||||||||| | || ||||| Sbjct: 400 catgattttggtgcttgttttcactatcaagaagaaaaagctattgagaggggaattctt 459 Query: 567 ccattgctgcgacgcgctacattggtgcagacatttggaca 607 |||||||| | ||| ||||| |||| || || |||||||| Sbjct: 460 ccattgctccaacgtgctaccctggttcaaacttttggaca 500 Score = 54.0 bits (27), Expect = 6e-04 Identities = 78/95 (82%) Strand = Plus / Plus Query: 342 gattggttctacacaccagtttataccacgtgtgatcttactcctgctggtcttcccttg 401 ||||||||||| || || ||||| ||||| ||||| || || || ||| |||||||| Sbjct: 235 gattggttctatacccctgtttacaccacttgtgacctgacaccgaatggccttccctta 294 Query: 402 ccattcaagtcaccacgggtgatgaggagtgcaat 436 || || ||||||||||| |||||||||||||||| Sbjct: 295 ccgtttaagtcaccacgtatgatgaggagtgcaat 329
>gb|AY935506.1| Populus tremula x Populus tremuloides secondary cell wall-related glycosyltransferase family 47 mRNA, complete cds Length = 1429 Score = 56.0 bits (28), Expect = 1e-04 Identities = 67/80 (83%) Strand = Plus / Plus Query: 486 gatcacttctttgttgtcccacatgactttggggcttgctttcattatcaggaagaaaaa 545 |||||||| |||||||| || ||||||||||| || ||||| || | ||||||||| ||| Sbjct: 473 gatcacttttttgttgtgccccatgactttggagcctgcttccactgtcaggaagagaaa 532 Query: 546 gctattgaacgtggcattct 565 || |||| || |||||||| Sbjct: 533 gccgttgagcggggcattct 552
>dbj|AB010069.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MAC9 Length = 57246 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 582 gctacattggtgcagacatttggacaggagaatcatgtttgc 623 |||||| ||||||||||||||||||| ||||||||||||| Sbjct: 45704 gctacactggtgcagacatttggacaaaggaatcatgtttgc 45663 Score = 50.1 bits (25), Expect = 0.009 Identities = 46/53 (86%) Strand = Plus / Minus Query: 483 gcagatcacttctttgttgtcccacatgactttggggcttgctttcattatca 535 ||||| |||||||||||||| || ||||||||||| || || || |||||||| Sbjct: 46305 gcagaccacttctttgttgtgcctcatgactttggagcctgtttccattatca 46253
>gb|AC092032.5| Homo sapiens BAC clone RP11-730B22 from 7, complete sequence Length = 176398 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 604 gacaggagaatcatgtttgcct 625 |||||||||||||||||||||| Sbjct: 29230 gacaggagaatcatgtttgcct 29251
>gb|AC013416.4|AC013416 Homo sapiens BAC clone CTD-2522F11 from 7, complete sequence Length = 117927 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 220 aatacaacaagaagatggtcac 241 |||||||||||||||||||||| Sbjct: 40347 aatacaacaagaagatggtcac 40368
>gb|AC133860.5| Oryza sativa chromosome 3 BAC OSJNBa0091E13 genomic sequence, complete sequence Length = 157397 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 70 cggcgccggccgccgcggccgctacggag 98 ||||||||||||||||||| || |||||| Sbjct: 113612 cggcgccggccgccgcggcggccacggag 113584
>ref|NM_195174.1| Oryza sativa (japonica cultivar-group) unknown protein (OSJNBa0047G15.26), mRNA Length = 1206 Score = 42.1 bits (21), Expect = 2.2 Identities = 51/61 (83%) Strand = Plus / Plus Query: 456 tggcccttttggaaccgaactgatggcgcagatcacttctttgttgtcccacatgacttt 515 ||||||| |||||| |||| || || || ||||| ||||| ||||| |||||||||||| Sbjct: 370 tggccctactggaacagaacggagggtgcggatcatttcttcgttgtgccacatgacttt 429 Query: 516 g 516 | Sbjct: 430 g 430
>ref|XM_463110.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1329 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 70 cggcgccggccgccgcggccgctacggag 98 ||||||||||||||||||| || |||||| Sbjct: 235 cggcgccggccgccgcggcggccacggag 207
>gb|AC092173.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0095J15, complete sequence Length = 156023 Score = 42.1 bits (21), Expect = 2.2 Identities = 51/61 (83%) Strand = Plus / Minus Query: 456 tggcccttttggaaccgaactgatggcgcagatcacttctttgttgtcccacatgacttt 515 ||||||| |||||| |||| || || || ||||| ||||| ||||| |||||||||||| Sbjct: 11563 tggccctactggaacagaacggagggtgcggatcatttcttcgttgtgccacatgacttt 11504 Query: 516 g 516 | Sbjct: 11503 g 11503 Score = 40.1 bits (20), Expect = 8.5 Identities = 35/39 (89%), Gaps = 2/39 (5%) Strand = Plus / Minus Query: 152 tgctggtgatgtgct--agaagacaatcctgtgggaaag 188 ||||||||||||||| ||||||| ||||||| |||||| Sbjct: 11869 tgctggtgatgtgctagagaagacgatcctgttggaaag 11831
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 70 cggcgccggccgccgcggccgctacggag 98 ||||||||||||||||||| || |||||| Sbjct: 22554534 cggcgccggccgccgcggcggccacggag 22554562
>gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, complete sequence Length = 3363523 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 72 gcgccggccgccgcggccgct 92 ||||||||||||||||||||| Sbjct: 2124171 gcgccggccgccgcggccgct 2124191
>gb|AE008829.1| Salmonella typhimurium LT2, section 133 of 220 of the complete genome Length = 20371 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 469 accgaactgatggcgcagatc 489 ||||||||||||||||||||| Sbjct: 15619 accgaactgatggcgcagatc 15639
>emb|AL627276.1| Salmonella enterica serovar Typhi (Salmonella typhi) strain CT18, complete chromosome; segment 12/20 Length = 274050 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 469 accgaactgatggcgcagatc 489 ||||||||||||||||||||| Sbjct: 136225 accgaactgatggcgcagatc 136245
>gb|AC103077.6| Rattus norvegicus BAC CH230-224J5 (Children's Hospital Oakland Research Institute Rat (BN/SsNHsd/MCW) BAC library) complete sequence Length = 200930 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 287 catgcaccgtttcttgctctc 307 ||||||||||||||||||||| Sbjct: 193057 catgcaccgtttcttgctctc 193077
>gb|AC083944.8| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0047G15, from chromosome 10, complete sequence Length = 166474 Score = 42.1 bits (21), Expect = 2.2 Identities = 51/61 (83%) Strand = Plus / Minus Query: 456 tggcccttttggaaccgaactgatggcgcagatcacttctttgttgtcccacatgacttt 515 ||||||| |||||| |||| || || || ||||| ||||| ||||| |||||||||||| Sbjct: 145093 tggccctactggaacagaacggagggtgcggatcatttcttcgttgtgccacatgacttt 145034 Query: 516 g 516 | Sbjct: 145033 g 145033 Score = 40.1 bits (20), Expect = 8.5 Identities = 35/39 (89%), Gaps = 2/39 (5%) Strand = Plus / Minus Query: 152 tgctggtgatgtgct--agaagacaatcctgtgggaaag 188 ||||||||||||||| ||||||| ||||||| |||||| Sbjct: 145399 tgctggtgatgtgctagagaagacgatcctgttggaaag 145361
>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome Length = 2909809 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 100 ccggcgaggccgaccacgccg 120 ||||||||||||||||||||| Sbjct: 1482841 ccggcgaggccgaccacgccg 1482821
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 42.1 bits (21), Expect = 2.2 Identities = 51/61 (83%) Strand = Plus / Minus Query: 456 tggcccttttggaaccgaactgatggcgcagatcacttctttgttgtcccacatgacttt 515 ||||||| |||||| |||| || || || ||||| ||||| ||||| |||||||||||| Sbjct: 5139792 tggccctactggaacagaacggagggtgcggatcatttcttcgttgtgccacatgacttt 5139733 Query: 516 g 516 | Sbjct: 5139732 g 5139732 Score = 40.1 bits (20), Expect = 8.5 Identities = 35/39 (89%), Gaps = 2/39 (5%) Strand = Plus / Minus Query: 152 tgctggtgatgtgct--agaagacaatcctgtgggaaag 188 ||||||||||||||| ||||||| ||||||| |||||| Sbjct: 5140098 tgctggtgatgtgctagagaagacgatcctgttggaaag 5140060
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 70 cggcgccggccgccgcggccgctacggag 98 ||||||||||||||||||| || |||||| Sbjct: 22547563 cggcgccggccgccgcggcggccacggag 22547591
>gb|CP000026.1| Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150 Length = 4585229 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 469 accgaactgatggcgcagatc 489 ||||||||||||||||||||| Sbjct: 2800757 accgaactgatggcgcagatc 2800777
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 100 ccggcgaggccgaccacgccgttca 124 |||||||||||||||||| |||||| Sbjct: 6231739 ccggcgaggccgaccacgacgttca 6231715
>dbj|AK109393.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-A02, full insert sequence Length = 1379 Score = 42.1 bits (21), Expect = 2.2 Identities = 51/61 (83%) Strand = Plus / Plus Query: 456 tggcccttttggaaccgaactgatggcgcagatcacttctttgttgtcccacatgacttt 515 ||||||| |||||| |||| || || || ||||| ||||| ||||| |||||||||||| Sbjct: 206 tggccctactggaacagaacggagggtgcggatcatttcttcgttgtgccacatgacttt 265 Query: 516 g 516 | Sbjct: 266 g 266
>dbj|AK070803.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023069D21, full insert sequence Length = 1744 Score = 42.1 bits (21), Expect = 2.2 Identities = 51/61 (83%) Strand = Plus / Plus Query: 456 tggcccttttggaaccgaactgatggcgcagatcacttctttgttgtcccacatgacttt 515 ||||||| |||||| |||| || || || ||||| ||||| ||||| |||||||||||| Sbjct: 565 tggccctactggaacagaacggagggtgcggatcatttcttcgttgtgccacatgacttt 624 Query: 516 g 516 | Sbjct: 625 g 625
>gb|AE014613.1| Salmonella enterica subsp. enterica serovar Typhi Ty2, complete genome Length = 4791961 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 469 accgaactgatggcgcagatc 489 ||||||||||||||||||||| Sbjct: 2824082 accgaactgatggcgcagatc 2824102
>gb|AE017220.1| Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67, complete genome Length = 4755700 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 469 accgaactgatggcgcagatc 489 ||||||||||||||||||||| Sbjct: 2939750 accgaactgatggcgcagatc 2939770
>dbj|AB080694.1| Oryza sativa (japonica cultivar-group) OsGUT1 mRNA for NpGUT1 homolog, complete cds Length = 1206 Score = 42.1 bits (21), Expect = 2.2 Identities = 51/61 (83%) Strand = Plus / Plus Query: 456 tggcccttttggaaccgaactgatggcgcagatcacttctttgttgtcccacatgacttt 515 ||||||| |||||| |||| || || || ||||| ||||| ||||| |||||||||||| Sbjct: 370 tggccctactggaacagaacggagggtgcggatcatttcttcgttgtgccacatgacttt 429 Query: 516 g 516 | Sbjct: 430 g 430
>gb|AC130926.4| Rattus norvegicus BAC CH230-39O11 (Children's Hospital Oakland Research Institute Rat (BN/SsNHsd/MCW) BAC library) complete sequence Length = 217219 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 287 catgcaccgtttcttgctctc 307 ||||||||||||||||||||| Sbjct: 70483 catgcaccgtttcttgctctc 70463
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 42.1 bits (21), Expect = 2.2 Identities = 51/61 (83%) Strand = Plus / Minus Query: 456 tggcccttttggaaccgaactgatggcgcagatcacttctttgttgtcccacatgacttt 515 ||||||| |||||| |||| || || || ||||| ||||| ||||| |||||||||||| Sbjct: 5140579 tggccctactggaacagaacggagggtgcggatcatttcttcgttgtgccacatgacttt 5140520 Query: 516 g 516 | Sbjct: 5140519 g 5140519 Score = 40.1 bits (20), Expect = 8.5 Identities = 35/39 (89%), Gaps = 2/39 (5%) Strand = Plus / Minus Query: 152 tgctggtgatgtgct--agaagacaatcctgtgggaaag 188 ||||||||||||||| ||||||| ||||||| |||||| Sbjct: 5140885 tgctggtgatgtgctagagaagacgatcctgttggaaag 5140847
>ref|XM_511763.1| PREDICTED: Pan troglodytes similar to hypothetical protein FLJ23825 (LOC454992), mRNA Length = 2336 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 588 ttggtgcagacatttggaca 607 |||||||||||||||||||| Sbjct: 303 ttggtgcagacatttggaca 322
>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence Length = 3587082 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 73 cgccggccgccgcggccgct 92 |||||||||||||||||||| Sbjct: 1366737 cgccggccgccgcggccgct 1366718
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence Length = 3694126 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 68 gacggcgccggccgccgcggccgc 91 |||||||||||||| ||||||||| Sbjct: 3293597 gacggcgccggccgtcgcggccgc 3293574
>ref|XM_472562.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 672 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 73 cgccggccgccgcggccgct 92 |||||||||||||||||||| Sbjct: 534 cgccggccgccgcggccgct 515
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 66 ctgacggcgccggccgccgcggcc 89 ||||||||||||| |||||||||| Sbjct: 2420365 ctgacggcgccggtcgccgcggcc 2420342
>gb|AF100305.1| Caenorhabditis elegans cosmid W04B5, complete sequence Length = 30305 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 397 ccttgccattcaagtcacca 416 |||||||||||||||||||| Sbjct: 23888 ccttgccattcaagtcacca 23907
>gb|AC139751.2| Mus musculus BAC clone RP24-403E24 from chromosome 17, complete sequence Length = 183224 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 504 ccacatgactttggggcttg 523 |||||||||||||||||||| Sbjct: 19122 ccacatgactttggggcttg 19103
>gb|AC135108.3| Mus musculus BAC clone RP24-538P2 from chromosome 9, complete sequence Length = 137981 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 422 gatgaggagtgcaattcagt 441 |||||||||||||||||||| Sbjct: 59983 gatgaggagtgcaattcagt 60002
>gb|AF067215.3| Caenorhabditis elegans cosmid ZK380, complete sequence Length = 28390 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 397 ccttgccattcaagtcacca 416 |||||||||||||||||||| Sbjct: 19455 ccttgccattcaagtcacca 19436
>ref|XM_548801.2| PREDICTED: Canis familiaris similar to CG7985-PA (LOC491680), mRNA Length = 1452 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 588 ttggtgcagacatttggaca 607 |||||||||||||||||||| Sbjct: 262 ttggtgcagacatttggaca 281
>gb|AY348326.1| Chryseobacterium meningosepticum class B carbapenemase BlaB-11 (blaB-11) gene, complete cds Length = 750 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 592 tgcagacatttggacaggagaatc 615 ||||| |||||||||||||||||| Sbjct: 53 tgcaggcatttggacaggagaatc 76
>gb|AC126246.3| Mus musculus BAC clone RP24-354D18 from chromosome 17, complete sequence Length = 168278 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 516 ggggcttgctttcattatca 535 |||||||||||||||||||| Sbjct: 117539 ggggcttgctttcattatca 117520
>emb|AL354976.11| Human DNA sequence from clone RP11-20I6 on chromosome 10 Contains a CpG island, complete sequence Length = 127766 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 185 aaagttaaaggttttcatat 204 |||||||||||||||||||| Sbjct: 58050 aaagttaaaggttttcatat 58069
>emb|X96858.1|CMBLAB C.meningosepticum blaB gene Length = 913 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 592 tgcagacatttggacaggagaatc 615 ||||| |||||||||||||||||| Sbjct: 166 tgcaggcatttggacaggagaatc 189
>emb|BX640449.1| Bordetella bronchiseptica strain RB50, complete genome; segment 13/16 Length = 348074 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 70 cggcgccggccgccgcggcc 89 |||||||||||||||||||| Sbjct: 58668 cggcgccggccgccgcggcc 58687
>emb|BX640434.1| Bordetella parapertussis strain 12822, complete genome; segment 12/14 Length = 344805 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 70 cggcgccggccgccgcggcc 89 |||||||||||||||||||| Sbjct: 11472 cggcgccggccgccgcggcc 11491
>emb|BX640421.1| Bordetella pertussis strain Tohama I, complete genome; segment 11/12 Length = 349726 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 70 cggcgccggccgccgcggcc 89 |||||||||||||||||||| Sbjct: 128673 cggcgccggccgccgcggcc 128692
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 72 gcgccggccgccgcggccgc 91 |||||||||||||||||||| Sbjct: 442720 gcgccggccgccgcggccgc 442739
>emb|AL939127.1|SCO939127 Streptomyces coelicolor A3(2) complete genome; segment 24/29 Length = 290850 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 105 gaggccgaccacgccgttca 124 |||||||||||||||||||| Sbjct: 123295 gaggccgaccacgccgttca 123314
>emb|AL606626.3|OSJN00050 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0088K19, complete sequence Length = 156002 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 73 cgccggccgccgcggccgct 92 |||||||||||||||||||| Sbjct: 56496 cgccggccgccgcggccgct 56477
>emb|CR607308.1| full-length cDNA clone CS0DL011YN22 of B cells (Ramos cell line) Cot 25-normalized of Homo sapiens (human) Length = 1820 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 588 ttggtgcagacatttggaca 607 |||||||||||||||||||| Sbjct: 351 ttggtgcagacatttggaca 370
>gb|U40956.1| Caenorhabditis elegans cosmid ZK402, complete sequence Length = 9558 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 397 ccttgccattcaagtcacca 416 |||||||||||||||||||| Sbjct: 5832 ccttgccattcaagtcacca 5851
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 72 gcgccggccgccgcggccgc 91 |||||||||||||||||||| Sbjct: 4037380 gcgccggccgccgcggccgc 4037399
>gb|CP000254.1| Methanospirillum hungatei JF-1, complete genome Length = 3544738 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 532 atcaggaagaaaaagctattgaac 555 ||||||||||||||||||| |||| Sbjct: 680062 atcaggaagaaaaagctatagaac 680039
>gb|S57628.1| Zea mays metallothionein-like protein gene, complete cds Length = 1859 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 94 cggagtccggcgaggccgaccacg 117 |||||||||||||||||| ||||| Sbjct: 1357 cggagtccggcgaggccgcccacg 1380
>ref|NM_001038489.1| Caenorhabditis elegans ZK380.5 (ZK380.5) mRNA, complete cds Length = 411 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 397 ccttgccattcaagtcacca 416 |||||||||||||||||||| Sbjct: 348 ccttgccattcaagtcacca 367
>ref|NM_065153.2| Caenorhabditis elegans W04B5.1 (W04B5.1) mRNA, complete cds Length = 630 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 397 ccttgccattcaagtcacca 416 |||||||||||||||||||| Sbjct: 560 ccttgccattcaagtcacca 579
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 72 gcgccggccgccgcggccgc 91 |||||||||||||||||||| Sbjct: 1502178 gcgccggccgccgcggccgc 1502159
>emb|BX571757.8| Zebrafish DNA sequence from clone CH211-273J9 in linkage group 16, complete sequence Length = 167101 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 263 tcacatgtttgctgcggaaatatt 286 |||||| ||||||||||||||||| Sbjct: 54614 tcacatttttgctgcggaaatatt 54637
>gb|AC107425.6| Homo sapiens 3 BAC RP11-497L23 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 130297 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 527 tcattatcaggaagaaaaag 546 |||||||||||||||||||| Sbjct: 116470 tcattatcaggaagaaaaag 116451
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 70 cggcgccggccgccgcggcc 89 |||||||||||||||||||| Sbjct: 3407915 cggcgccggccgccgcggcc 3407896
>gb|AC132938.9| Homo sapiens chromosome 17, clone RP13-20L14, complete sequence Length = 154252 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 588 ttggtgcagacatttggaca 607 |||||||||||||||||||| Sbjct: 38300 ttggtgcagacatttggaca 38281
>gb|AC124287.10| Homo sapiens chromosome 17, clone RP13-991F5, complete sequence Length = 162180 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 588 ttggtgcagacatttggaca 607 |||||||||||||||||||| Sbjct: 51167 ttggtgcagacatttggaca 51186
>gb|BC035561.1| Homo sapiens hexosaminidase (glycosyl hydrolase family 20, catalytic domain) containing, mRNA (cDNA clone MGC:40554 IMAGE:5211583), complete cds Length = 1953 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 588 ttggtgcagacatttggaca 607 |||||||||||||||||||| Sbjct: 353 ttggtgcagacatttggaca 372
>gb|BC018205.1| Homo sapiens hexosaminidase (glycosyl hydrolase family 20, catalytic domain) containing, mRNA (cDNA clone MGC:9663 IMAGE:3464710), complete cds Length = 1752 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 588 ttggtgcagacatttggaca 607 |||||||||||||||||||| Sbjct: 267 ttggtgcagacatttggaca 286
>gb|AY129235.1| Streptomyces noursei putative tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase gene, partial cds; albonoursin biosynthetic gene cluster, complete sequence; and putative NADP-specific glutamate dehydrogenase gene, partial cds Length = 4523 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 70 cggcgccggccgccgcggcc 89 |||||||||||||||||||| Sbjct: 3280 cggcgccggccgccgcggcc 3299
>gb|AF189301.1|AF189301 Chryseobacterium meningosepticum GEO class B carbapenemase BlaB-3 gene, complete cds Length = 750 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 592 tgcagacatttggacaggagaatc 615 ||||| |||||||||||||||||| Sbjct: 53 tgcaggcatttggacaggagaatc 76
>gb|AF189300.1|AF189300 Chryseobacterium meningosepticum AMA class B carbapenemase BlaB-2 gene, complete cds Length = 750 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 592 tgcagacatttggacaggagaatc 615 ||||| |||||||||||||||||| Sbjct: 53 tgcaggcatttggacaggagaatc 76
>gb|AF189299.1|AF189299 Chryseobacterium meningosepticum CIP 6059 class B carbapenemase BlaB-3 gene, complete cds Length = 750 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 592 tgcagacatttggacaggagaatc 615 ||||| |||||||||||||||||| Sbjct: 53 tgcaggcatttggacaggagaatc 76
>gb|AF189298.1|AF189298 Chryseobacterium meningosepticum PINT class B carbapenemase BlaB-1 gene, complete cds Length = 750 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 592 tgcagacatttggacaggagaatc 615 ||||| |||||||||||||||||| Sbjct: 53 tgcaggcatttggacaggagaatc 76
>gb|AF126542.1|AF126542 Chryseobacterium meningosepticum putative L-serine deaminase SdaA (sdaA) gene, partial cds; and beta-lactamase BlaB2 (blaB2) gene, complete cds Length = 1657 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 592 tgcagacatttggacaggagaatc 615 ||||| |||||||||||||||||| Sbjct: 918 tgcaggcatttggacaggagaatc 941
>dbj|AK074405.1| Homo sapiens cDNA FLJ23825 fis, clone HUV00659 Length = 1720 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 588 ttggtgcagacatttggaca 607 |||||||||||||||||||| Sbjct: 235 ttggtgcagacatttggaca 254
>ref|NM_173620.1| Homo sapiens hexosaminidase (glycosyl hydrolase family 20, catalytic domain) containing (HEXDC), mRNA Length = 1953 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 588 ttggtgcagacatttggaca 607 |||||||||||||||||||| Sbjct: 353 ttggtgcagacatttggaca 372
>gb|AY108460.1| Zea mays PCO105471 mRNA sequence Length = 598 Score = 40.1 bits (20), Expect = 8.5 Identities = 32/36 (88%) Strand = Plus / Plus Query: 146 aggaagtgctggtgatgtgctagaagacaatcctgt 181 |||||| |||||||||||| ||||||| || ||||| Sbjct: 414 aggaagcgctggtgatgtgttagaagataaccctgt 449
>dbj|AP000904.6| Homo sapiens genomic DNA, chromosome 11 clone:RP11-702B10, complete sequence Length = 175904 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 212 gccaagaaaatacaacaaga 231 |||||||||||||||||||| Sbjct: 149281 gccaagaaaatacaacaaga 149262
>gb|CP000020.1| Vibrio fischeri ES114 chromosome I, complete sequence Length = 2906179 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 224 caacaagaagatggtcacca 243 |||||||||||||||||||| Sbjct: 105460 caacaagaagatggtcacca 105479
>gb|AC119238.8| Mus musculus chromosome 18, clone RP24-228A21, complete sequence Length = 151694 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 527 tcattatcaggaagaaaaag 546 |||||||||||||||||||| Sbjct: 142403 tcattatcaggaagaaaaag 142422
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 70 cggcgccggccgccgcggcc 89 |||||||||||||||||||| Sbjct: 2963248 cggcgccggccgccgcggcc 2963267 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 70 cggcgccggccgccgcggcc 89 |||||||||||||||||||| Sbjct: 1926779 cggcgccggccgccgcggcc 1926760
>gb|AC115822.9| Mus musculus chromosome 18, clone RP23-406D17, complete sequence Length = 160731 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 527 tcattatcaggaagaaaaag 546 |||||||||||||||||||| Sbjct: 35615 tcattatcaggaagaaaaag 35634
>gb|AC153418.1| Mus musculus BAC clone RP23-437E18 from 17, complete sequence Length = 211386 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 516 ggggcttgctttcattatca 535 |||||||||||||||||||| Sbjct: 16857 ggggcttgctttcattatca 16876
>emb|CT025659.7| Mouse DNA sequence from clone RP24-86F23 on chromosome 17, complete sequence Length = 183855 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 504 ccacatgactttggggcttg 523 |||||||||||||||||||| Sbjct: 35283 ccacatgactttggggcttg 35302
>emb|AL672229.12| Mouse DNA sequence from clone RP23-335A6 on chromosome 17, complete sequence Length = 187977 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 516 ggggcttgctttcattatca 535 |||||||||||||||||||| Sbjct: 151549 ggggcttgctttcattatca 151568 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,454,656 Number of Sequences: 3902068 Number of extensions: 5454656 Number of successful extensions: 108722 Number of sequences better than 10.0: 109 Number of HSP's better than 10.0 without gapping: 110 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 106511 Number of HSP's gapped (non-prelim): 2184 length of query: 625 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 602 effective length of database: 17,143,297,704 effective search space: 10320265217808 effective search space used: 10320265217808 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
