ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags18c01 |
|---|---|
| Clone Library Name | barley_pub |
>VA0D2_ARATH (Q9LHA4) Probable vacuolar ATP synthase subunit d 2 (EC 3.6.3.14)| (V-ATPase d subunit 2) (Vacuolar proton pump d subunit 2) Length = 351 Score = 368 bits (944), Expect(2) = e-101 Identities = 177/195 (90%), Positives = 188/195 (96%) Frame = +2 Query: 29 CETLDDIKMHLSATEYGPYLQNEPSPLHTTTIVEKCTLKLVDEYKHMLCQANEPLSTFLQ 208 CE LDDIKMHLSAT+YGPYLQNEPSPLHTTTIVEKCTLKLVD+YKHMLCQA EP+STFL+ Sbjct: 39 CENLDDIKMHLSATKYGPYLQNEPSPLHTTTIVEKCTLKLVDDYKHMLCQATEPMSTFLE 98 Query: 209 YITYGHMIDNVVLIVTGTLHERDVNELLEKCHPLGMFDSIASLAVAQNMRELYRLVLVDT 388 YI YGHMIDNVVLIVTGTLHERDV EL+EKCHPLGMFDSIA+LAVAQNMRELYRLVLVDT Sbjct: 99 YIRYGHMIDNVVLIVTGTLHERDVQELIEKCHPLGMFDSIATLAVAQNMRELYRLVLVDT 158 Query: 389 PLAPYFSECITSEDLDDMNIEIMRNTLYKAYLQDFYKFCAKLGGATADIMCNLLSFEADR 568 PLAPYFSEC+TSEDLDDMNIEIMRNTLYKAYL+DFY FC KLGGATA+IM +LL+FEADR Sbjct: 159 PLAPYFSECLTSEDLDDMNIEIMRNTLYKAYLEDFYNFCQKLGGATAEIMSDLLAFEADR 218 Query: 569 RAVNITINSIGTELT 613 RAVNITINSIGTELT Sbjct: 219 RAVNITINSIGTELT 233 Score = 21.2 bits (43), Expect(2) = e-101 Identities = 7/8 (87%), Positives = 8/8 (100%) Frame = +3 Query: 6 ADYNNLCR 29 ADYNNLC+ Sbjct: 31 ADYNNLCQ 38
>VA0D1_ARATH (Q9LJI5) Probable vacuolar ATP synthase subunit d 1 (EC 3.6.3.14)| (V-ATPase d subunit 1) (Vacuolar proton pump d subunit 1) Length = 351 Score = 367 bits (941), Expect(2) = e-101 Identities = 177/195 (90%), Positives = 188/195 (96%) Frame = +2 Query: 29 CETLDDIKMHLSATEYGPYLQNEPSPLHTTTIVEKCTLKLVDEYKHMLCQANEPLSTFLQ 208 CE LDDIKMHLSAT+YG YLQNEPSPLHTTTIVEKCTLKLVD+YKHMLCQA EP+STFL+ Sbjct: 39 CENLDDIKMHLSATKYGSYLQNEPSPLHTTTIVEKCTLKLVDDYKHMLCQATEPMSTFLE 98 Query: 209 YITYGHMIDNVVLIVTGTLHERDVNELLEKCHPLGMFDSIASLAVAQNMRELYRLVLVDT 388 YI YGHMIDNVVLIVTGTLHERDV EL+EKCHPLGMFDSIA+LAVAQNMRELYRLVLVDT Sbjct: 99 YIRYGHMIDNVVLIVTGTLHERDVQELIEKCHPLGMFDSIATLAVAQNMRELYRLVLVDT 158 Query: 389 PLAPYFSECITSEDLDDMNIEIMRNTLYKAYLQDFYKFCAKLGGATADIMCNLLSFEADR 568 PLAPYFSEC+TSEDLDDMNIEIMRNTLYKAYL+DFYKFC KLGGATA+IM +LL+FEADR Sbjct: 159 PLAPYFSECLTSEDLDDMNIEIMRNTLYKAYLEDFYKFCQKLGGATAEIMSDLLAFEADR 218 Query: 569 RAVNITINSIGTELT 613 RAVNITINSIGTELT Sbjct: 219 RAVNITINSIGTELT 233 Score = 21.2 bits (43), Expect(2) = e-101 Identities = 7/8 (87%), Positives = 8/8 (100%) Frame = +3 Query: 6 ADYNNLCR 29 ADYNNLC+ Sbjct: 31 ADYNNLCQ 38
>VA0D_DICDI (P54641) Vacuolar ATP synthase subunit d (EC 3.6.3.14) (V-ATPase d| subunit) (Vacuolar proton pump d subunit) (V-ATPase 41 kDa accessory protein) (DVA41) Length = 356 Score = 265 bits (677), Expect(2) = 4e-71 Identities = 123/196 (62%), Positives = 160/196 (81%), Gaps = 1/196 (0%) Frame = +2 Query: 29 CETLDDIKMHLSATEYGPYLQNEPSPLHTTTIVEKCTLKLVDEYKHMLCQANEPLSTFLQ 208 C+ L+D+KMH +T+YG +L EPSP+HTTTI EK T KLV E+ H+ QA EPLSTF+ Sbjct: 45 CDNLEDMKMHFISTDYGDFLAGEPSPIHTTTIAEKATGKLVSEFNHIRNQAVEPLSTFMD 104 Query: 209 YITYGHMIDNVVLIVTGTLHERDVNELLEKCHPLGMFDSIASLAVAQNMRELYRLVLVDT 388 +I+YG+MIDNVVL++TGTLHERD++EL++KCHPLG+F S+A+L+V N+ +LY VL+DT Sbjct: 105 FISYGYMIDNVVLLITGTLHERDISELVDKCHPLGLFKSMATLSVVHNVADLYNNVLIDT 164 Query: 389 PLAPYFSECITSEDLDDMNIEIMRNTLYKAYLQDFYKFCAKLGGATADIMCNLLSFEADR 568 PLAPY C++ EDLD+MN EI+RNTLYKAYL+DFY +C LGG T IM ++L FEADR Sbjct: 165 PLAPYIQGCLSEEDLDEMNNEIIRNTLYKAYLEDFYNYCKYLGGQTELIMSDILKFEADR 224 Query: 569 RAVNITINSIG-TELT 613 R++NITINS G TEL+ Sbjct: 225 RSINITINSFGATELS 240 Score = 23.1 bits (48), Expect(2) = 4e-71 Identities = 8/9 (88%), Positives = 9/9 (100%) Frame = +3 Query: 3 RADYNNLCR 29 RADYNNLC+ Sbjct: 36 RADYNNLCQ 44
>VA0D1_DROME (Q9W4P5) Vacuolar ATP synthase subunit d 1 (EC 3.6.3.14) (V-ATPase| d subunit 1) (Vacuolar proton pump d subunit 1) (V-ATPase 39 kDa subunit 1) Length = 350 Score = 263 bits (672), Expect = 3e-70 Identities = 120/195 (61%), Positives = 156/195 (80%) Frame = +2 Query: 29 CETLDDIKMHLSATEYGPYLQNEPSPLHTTTIVEKCTLKLVDEYKHMLCQANEPLSTFLQ 208 CETL+D+K+HL T+YG +L NEPSPL + I +K KLV E++HM A EPLS FL Sbjct: 38 CETLEDLKLHLQGTDYGSFLANEPSPLSVSVIDDKLREKLVIEFQHMRNHAVEPLSNFLD 97 Query: 209 YITYGHMIDNVVLIVTGTLHERDVNELLEKCHPLGMFDSIASLAVAQNMRELYRLVLVDT 388 +ITYG+MIDN++L++TGTLH+R ++EL+ KCHPLG F+ + ++ VA ELY VLVDT Sbjct: 98 FITYGYMIDNIILLITGTLHQRPISELIPKCHPLGSFEQMEAIHVASTPAELYNAVLVDT 157 Query: 389 PLAPYFSECITSEDLDDMNIEIMRNTLYKAYLQDFYKFCAKLGGATADIMCNLLSFEADR 568 PLAP+F +CI+ +DLD+MNIEI+RNTLYKAYL+ FY FC +GGATAD+MC +L+FEADR Sbjct: 158 PLAPFFVDCISEQDLDEMNIEIIRNTLYKAYLEAFYNFCKNMGGATADVMCEILAFEADR 217 Query: 569 RAVNITINSIGTELT 613 RA+ ITINS GTEL+ Sbjct: 218 RAIIITINSFGTELS 232
>VA0D_MANSE (Q25531) Vacuolar ATP synthase subunit d (EC 3.6.3.14) (V-ATPase d| subunit) (Vacuolar proton pump d subunit) (V-ATPase 40 kDa subunit) (M40) Length = 348 Score = 260 bits (665), Expect = 2e-69 Identities = 118/195 (60%), Positives = 157/195 (80%) Frame = +2 Query: 29 CETLDDIKMHLSATEYGPYLQNEPSPLHTTTIVEKCTLKLVDEYKHMLCQANEPLSTFLQ 208 CETL+D+K+HL T+YG +L NEPSPL +TI +K KLV E++H+ + EPLSTFL Sbjct: 36 CETLEDLKLHLQGTDYGTFLANEPSPLSVSTIDDKLREKLVIEFQHLRNHSVEPLSTFLD 95 Query: 209 YITYGHMIDNVVLIVTGTLHERDVNELLEKCHPLGMFDSIASLAVAQNMRELYRLVLVDT 388 +ITY +MIDN++L++TGTLH+R ++EL+ KCHPLG F+ + ++ VA ELY VLVDT Sbjct: 96 FITYSYMIDNIILLITGTLHQRPISELIPKCHPLGSFEQMEAIHVAATPAELYNAVLVDT 155 Query: 389 PLAPYFSECITSEDLDDMNIEIMRNTLYKAYLQDFYKFCAKLGGATADIMCNLLSFEADR 568 PLAP+F +CI+ +DLD+MNIEI+RNTLYKAYL+ FY FC ++GG TAD+MC +L+FEADR Sbjct: 156 PLAPFFVDCISEQDLDEMNIEIIRNTLYKAYLEAFYDFCKQIGGTTADVMCEILAFEADR 215 Query: 569 RAVNITINSIGTELT 613 RA+ ITINS GTEL+ Sbjct: 216 RAIIITINSFGTELS 230
>VA0D_MOUSE (P51863) Vacuolar ATP synthase subunit d (EC 3.6.3.14) (V-ATPase d| subunit) (Vacuolar proton pump d subunit) (V-ATPase AC39 subunit) (V-ATPase 40 kDa accessory protein) (P39) (Physophilin) Length = 351 Score = 251 bits (642), Expect = 9e-67 Identities = 116/195 (59%), Positives = 152/195 (77%) Frame = +2 Query: 29 CETLDDIKMHLSATEYGPYLQNEPSPLHTTTIVEKCTLKLVDEYKHMLCQANEPLSTFLQ 208 CETL+D+K+HL +T+YG +L NE SPL + I +K K+V E++HM A EPL++FL Sbjct: 39 CETLEDLKLHLQSTDYGNFLANEASPLTVSVIDDKLKEKMVVEFRHMRNHAYEPLASFLD 98 Query: 209 YITYGHMIDNVVLIVTGTLHERDVNELLEKCHPLGMFDSIASLAVAQNMRELYRLVLVDT 388 +ITY +MIDNV+L++TGTLH+R + EL+ KCHPLG F+ + ++ +AQ ELY +LVDT Sbjct: 99 FITYSYMIDNVILLITGTLHQRSIAELVPKCHPLGSFEQMEAVNIAQTPAELYNAILVDT 158 Query: 389 PLAPYFSECITSEDLDDMNIEIMRNTLYKAYLQDFYKFCAKLGGATADIMCNLLSFEADR 568 PLA +F +CI+ +DLD+MNIEI+RNTLYKAYL+ FYKFC LGG TAD MC +L FEADR Sbjct: 159 PLAAFFQDCISEQDLDEMNIEIIRNTLYKAYLESFYKFCTLLGGTTADAMCPILEFEADR 218 Query: 569 RAVNITINSIGTELT 613 RA ITINS GTEL+ Sbjct: 219 RAFIITINSFGTELS 233
>VA0D_PONPY (Q5R6I1) Vacuolar ATP synthase subunit d (EC 3.6.3.14) (V-ATPase d| subunit) (Vacuolar proton pump d subunit) Length = 351 Score = 250 bits (639), Expect = 2e-66 Identities = 115/195 (58%), Positives = 152/195 (77%) Frame = +2 Query: 29 CETLDDIKMHLSATEYGPYLQNEPSPLHTTTIVEKCTLKLVDEYKHMLCQANEPLSTFLQ 208 CETL+D+K+HL +T+YG +L NE SPL + I ++ K+V E++HM A EPL++FL Sbjct: 39 CETLEDLKLHLQSTDYGNFLANEASPLTVSVIDDRLKEKMVVEFRHMRNHAYEPLASFLD 98 Query: 209 YITYGHMIDNVVLIVTGTLHERDVNELLEKCHPLGMFDSIASLAVAQNMRELYRLVLVDT 388 +ITY +MIDNV+L++TGTLH+R + EL+ KCHPLG F+ + ++ +AQ ELY +LVDT Sbjct: 99 FITYSYMIDNVILLITGTLHQRSIAELVPKCHPLGSFEQMEAVNIAQTPAELYNAILVDT 158 Query: 389 PLAPYFSECITSEDLDDMNIEIMRNTLYKAYLQDFYKFCAKLGGATADIMCNLLSFEADR 568 PLA +F +CI+ +DLD+MNIEI+RNTLYKAYL+ FYKFC LGG TAD MC +L FEADR Sbjct: 159 PLAAFFQDCISEQDLDEMNIEIIRNTLYKAYLESFYKFCTLLGGTTADAMCPILEFEADR 218 Query: 569 RAVNITINSIGTELT 613 RA ITINS GTEL+ Sbjct: 219 RAFIITINSFGTELS 233
>VA0D_HUMAN (P61421) Vacuolar ATP synthase subunit d (EC 3.6.3.14) (V-ATPase d| subunit) (Vacuolar proton pump d subunit) (V-ATPase AC39 subunit) (V-ATPase 40 kDa accessory protein) (P39) (32 kDa accessory protein) Length = 351 Score = 250 bits (639), Expect = 2e-66 Identities = 115/195 (58%), Positives = 152/195 (77%) Frame = +2 Query: 29 CETLDDIKMHLSATEYGPYLQNEPSPLHTTTIVEKCTLKLVDEYKHMLCQANEPLSTFLQ 208 CETL+D+K+HL +T+YG +L NE SPL + I ++ K+V E++HM A EPL++FL Sbjct: 39 CETLEDLKLHLQSTDYGNFLANEASPLTVSVIDDRLKEKMVVEFRHMRNHAYEPLASFLD 98 Query: 209 YITYGHMIDNVVLIVTGTLHERDVNELLEKCHPLGMFDSIASLAVAQNMRELYRLVLVDT 388 +ITY +MIDNV+L++TGTLH+R + EL+ KCHPLG F+ + ++ +AQ ELY +LVDT Sbjct: 99 FITYSYMIDNVILLITGTLHQRSIAELVPKCHPLGSFEQMEAVNIAQTPAELYNAILVDT 158 Query: 389 PLAPYFSECITSEDLDDMNIEIMRNTLYKAYLQDFYKFCAKLGGATADIMCNLLSFEADR 568 PLA +F +CI+ +DLD+MNIEI+RNTLYKAYL+ FYKFC LGG TAD MC +L FEADR Sbjct: 159 PLAAFFQDCISEQDLDEMNIEIIRNTLYKAYLESFYKFCTLLGGTTADAMCPILEFEADR 218 Query: 569 RAVNITINSIGTELT 613 RA ITINS GTEL+ Sbjct: 219 RAFIITINSFGTELS 233
>VA0D_BOVIN (P61420) Vacuolar ATP synthase subunit d (EC 3.6.3.14) (V-ATPase d| subunit) (Vacuolar proton pump d subunit) (V-ATPase AC39 subunit) (V-ATPase 40 kDa accessory protein) (P39) (32 kDa accessory protein) Length = 351 Score = 250 bits (639), Expect = 2e-66 Identities = 115/195 (58%), Positives = 152/195 (77%) Frame = +2 Query: 29 CETLDDIKMHLSATEYGPYLQNEPSPLHTTTIVEKCTLKLVDEYKHMLCQANEPLSTFLQ 208 CETL+D+K+HL +T+YG +L NE SPL + I ++ K+V E++HM A EPL++FL Sbjct: 39 CETLEDLKLHLQSTDYGNFLANEASPLTVSVIDDRLKEKMVVEFRHMRNHAYEPLASFLD 98 Query: 209 YITYGHMIDNVVLIVTGTLHERDVNELLEKCHPLGMFDSIASLAVAQNMRELYRLVLVDT 388 +ITY +MIDNV+L++TGTLH+R + EL+ KCHPLG F+ + ++ +AQ ELY +LVDT Sbjct: 99 FITYSYMIDNVILLITGTLHQRSIAELVPKCHPLGSFEQMEAVNIAQTPAELYNAILVDT 158 Query: 389 PLAPYFSECITSEDLDDMNIEIMRNTLYKAYLQDFYKFCAKLGGATADIMCNLLSFEADR 568 PLA +F +CI+ +DLD+MNIEI+RNTLYKAYL+ FYKFC LGG TAD MC +L FEADR Sbjct: 159 PLAAFFQDCISEQDLDEMNIEIIRNTLYKAYLESFYKFCTLLGGTTADAMCPILEFEADR 218 Query: 569 RAVNITINSIGTELT 613 RA ITINS GTEL+ Sbjct: 219 RAFIITINSFGTELS 233
>VA0D_SCHPO (O13753) Vacuolar ATP synthase subunit d (EC 3.6.3.14) (V-ATPase d| subunit) (Vacuolar proton pump d subunit) (V-ATPase 39 kDa subunit) (V-ATPase subunit M39) Length = 343 Score = 234 bits (597), Expect = 1e-61 Identities = 108/195 (55%), Positives = 155/195 (79%) Frame = +2 Query: 29 CETLDDIKMHLSATEYGPYLQNEPSPLHTTTIVEKCTLKLVDEYKHMLCQANEPLSTFLQ 208 CE+L+D ++ LS+T+YG +L N+ S L ++ I K T KL+DE+ + QA+E LS F+ Sbjct: 36 CESLEDFRLQLSSTDYGGFLANQ-SKLTSSIISAKATEKLLDEFDLIRRQADETLSKFMD 94 Query: 209 YITYGHMIDNVVLIVTGTLHERDVNELLEKCHPLGMFDSIASLAVAQNMRELYRLVLVDT 388 YITY +MIDN++L++TGT++ +D ++LLE+CHPLG F+++ +L VA N+ ELY +VL++T Sbjct: 95 YITYAYMIDNIMLLLTGTVNGQDTHDLLERCHPLGWFETLPALCVATNVEELYSVVLIET 154 Query: 389 PLAPYFSECITSEDLDDMNIEIMRNTLYKAYLQDFYKFCAKLGGATADIMCNLLSFEADR 568 PLAPYF +C++++DLD+ +IEI+RNTLYKAYL+DFY FC K+G TAD M +L FEADR Sbjct: 155 PLAPYFKDCLSADDLDEQHIEIIRNTLYKAYLEDFYNFCKKIGACTADTMLPILEFEADR 214 Query: 569 RAVNITINSIGTELT 613 RA+ ITINS GTEL+ Sbjct: 215 RAITITINSFGTELS 229
>VA0D_NEUCR (P53659) Vacuolar ATP synthase subunit d (EC 3.6.3.14) (V-ATPase d| subunit) (Vacuolar proton pump d subunit) (V-ATPase 41 kDa subunit) Length = 364 Score = 215 bits (547), Expect = 9e-56 Identities = 104/199 (52%), Positives = 142/199 (71%), Gaps = 4/199 (2%) Frame = +2 Query: 29 CETLDDIKMHLSATEYGPYLQNEPSPLHTTTIVEKCTLKLVDEYKHMLCQANEPLSTFLQ 208 CE++DD+K+ L YG +L + P T+ + K T KLV E++++ A L+ F+ Sbjct: 36 CESIDDLKLQLGPA-YGDFLASLPPKPSTSALAAKTTDKLVSEFRYVRANAAGSLAKFMD 94 Query: 209 YITYGHMIDNVVLIVTGTLHERDVNELLEKCHPLGMFDSIASLAVAQNMRELYRLVLVDT 388 Y+TYG+MIDNV L++TGTLHERD ELLE+CHPLG F+++ L VA N+ ELY V+++T Sbjct: 95 YLTYGYMIDNVALLITGTLHERDTRELLERCHPLGWFETMPVLCVATNIEELYNSVMIET 154 Query: 389 PLAPYFSECITSEDLDDMNIEIMRNTLYKAYLQDFYKFC----AKLGGATADIMCNLLSF 556 PLAPYF ++ +DLD++NIEI+RNTLYK YL+DFY F G TA++M LL F Sbjct: 155 PLAPYFKSSLSLQDLDELNIEIVRNTLYKNYLEDFYHFVNTHPDMAGTPTAEVMSELLEF 214 Query: 557 EADRRAVNITINSIGTELT 613 EADRRA+NIT+NS GTEL+ Sbjct: 215 EADRRAINITLNSFGTELS 233
>VA0D_YEAST (P32366) Vacuolar ATP synthase subunit d (EC 3.6.3.14) (V-ATPase d| subunit) (Vacuolar proton pump d subunit) (V-ATPase 39 kDa subunit) (V-ATPase subunit M39) Length = 345 Score = 202 bits (515), Expect = 5e-52 Identities = 97/193 (50%), Positives = 142/193 (73%), Gaps = 3/193 (1%) Frame = +2 Query: 29 CETLDDIKMHLSATEYGPYLQNEPSPLHTTTIVEK-CTLKLVDEYKHMLCQANEPLSTFL 205 C+TL+D+K+ LS+T+YG +L + S TT+++++ + KL E+ ++ Q++ F+ Sbjct: 36 CDTLEDLKLQLSSTDYGNFLSSVSSESLTTSLIQEYASSKLYHEFNYIRDQSSGSTRKFM 95 Query: 206 QYITYGHMIDNVVLIVTGTLHERDVNELLEKCHPLGMFDSIASLAVAQNMRELYRLVLVD 385 YITYG+MIDNV L++TGT+H+RD E+L++CHPLG FD++ +L+VA ++ LY VLVD Sbjct: 96 DYITYGYMIDNVALMITGTIHDRDKGEILQRCHPLGWFDTLPTLSVATDLESLYETVLVD 155 Query: 386 TPLAPYFSECI-TSEDLDDMNIEIMRNTLYKAYLQDFYKFCA-KLGGATADIMCNLLSFE 559 TPLAPYF C T+E+LDDMNIEI+RN LYKAYL+DFY F ++ + M LL FE Sbjct: 156 TPLAPYFKNCFDTAEELDDMNIEIIRNKLYKAYLEDFYNFVTEEIPEPAKECMQTLLGFE 215 Query: 560 ADRRAVNITINSI 598 ADRR++NI +NS+ Sbjct: 216 ADRRSINIALNSL 228
>VA0D2_DROME (Q9VCQ3) Probable vacuolar ATP synthase subunit d 2 (EC 3.6.3.14)| (V-ATPase d subunit 2) (Vacuolar proton pump d subunit 2) (V-ATPase 39 kDa subunit 2) Length = 350 Score = 174 bits (441), Expect = 2e-43 Identities = 82/195 (42%), Positives = 130/195 (66%), Gaps = 1/195 (0%) Frame = +2 Query: 29 CETLDDIKMHLSATEYGPYLQNEPSPLHTTTIVEKCTL-KLVDEYKHMLCQANEPLSTFL 205 CE+L+D+ + + T+YG E S + ++E+C +L+ +Y ++ + EPL+TF+ Sbjct: 35 CESLEDVMISIQGTDYGLIFGGEQSA-PSVEVIERCLRDRLLQQYYYIRSHSTEPLTTFM 93 Query: 206 QYITYGHMIDNVVLIVTGTLHERDVNELLEKCHPLGMFDSIASLAVAQNMRELYRLVLVD 385 ++I Y MIDNV L+V G + R + LL CHPLG FD + ++ VA N EL+ VL+D Sbjct: 94 EFIRYPFMIDNVALLVAGLNNHRSMKRLLRMCHPLGEFDQLGAIEVASNSAELFDAVLID 153 Query: 386 TPLAPYFSECITSEDLDDMNIEIMRNTLYKAYLQDFYKFCAKLGGATADIMCNLLSFEAD 565 TP+A + + E L +++EI+R LY+AYL+ FY +C++LGG TA++M NLLSFEAD Sbjct: 154 TPIARFVPRDLPMESLRYLDVEIVRAHLYRAYLEKFYAYCSQLGGNTANVMTNLLSFEAD 213 Query: 566 RRAVNITINSIGTEL 610 RR + I +N+IG+++ Sbjct: 214 RRTITIAVNAIGSDI 228
>DXR_BLOFL (Q7VRE2) 1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC| 1.1.1.267) (DXP reductoisomerase) (1-deoxyxylulose-5-phosphate reductoisomerase) (2-C-methyl-D-erythritol 4-phosphate synthase) Length = 391 Score = 31.2 bits (69), Expect = 2.5 Identities = 30/123 (24%), Positives = 53/123 (43%), Gaps = 5/123 (4%) Frame = +2 Query: 245 LIVTGTLHERDVNELLEKCHPLGMFDSIASLAVAQNMRELYRLVLVDTPLAPYFSECITS 424 L+++G L +V + PL DS + A+ QN+ +Y+ L L+ Y CI Sbjct: 113 LVLSGQLFMTEVYKYNASVLPL---DSEYN-AIFQNLSVIYQKKLGQVSLSQYGICCIVL 168 Query: 425 EDLDDMNIEIMRNTLYK-----AYLQDFYKFCAKLGGATADIMCNLLSFEADRRAVNITI 589 D + +I R L+K Y+ + K+ +A +M +L + N++ Sbjct: 169 TDSGGVLYKITRTKLFKITPVQVYIHPNWSMGLKISVNSATVMNRVLEYIEAHHLFNVSS 228 Query: 590 NSI 598 N I Sbjct: 229 NEI 231
>UHRF1_HUMAN (Q96T88) Ubiquitin-like PHD and RING finger domain-containing| protein 1 (EC 6.3.2.-) (Ubiquitin-like-containing PHD and RING finger domains protein 1) (Inverted CCAAT box-binding protein of 90 kDa) (Transcription factor ICBP90) (Nuclear zinc Length = 793 Score = 29.6 bits (65), Expect = 7.3 Identities = 18/53 (33%), Positives = 24/53 (45%), Gaps = 7/53 (13%) Frame = -1 Query: 509 SHKICKNPEDTLCRVCSS*SQYSCH-------PDPQM*CTLRSTVLRVYQLEP 372 S K CK+ + LCRVC +CH PD Q+ C +Y L+P Sbjct: 301 SCKHCKDDVNRLCRVC------ACHLCGGRQDPDKQLMCDECDMAFHIYCLDP 347
>TERT_YEAST (Q06163) Telomerase reverse transcriptase (EC 2.7.7.49) (Telomerase| catalytic subunit) Length = 884 Score = 29.6 bits (65), Expect = 7.3 Identities = 14/64 (21%), Positives = 33/64 (51%), Gaps = 10/64 (15%) Frame = -2 Query: 367 VKLTHILSNCKRC----------NAIKHAQWMAFLQQFIDISFMQCPSNNKDNIIDHVSI 218 +++ H++ N C N ++ Q+ +FLQ+ I+++ CP D +I++ + Sbjct: 781 MQIDHVVKNISECYKSAFKDLSINVTQNMQFHSFLQRIIEMTVSGCPITKCDPLIEY-EV 839 Query: 217 RYVL 206 R+ + Sbjct: 840 RFTI 843
>K1914_MOUSE (Q5DTU0) Protein KIAA1914| Length = 825 Score = 29.6 bits (65), Expect = 7.3 Identities = 15/44 (34%), Positives = 22/44 (50%) Frame = +2 Query: 17 QPLPCETLDDIKMHLSATEYGPYLQNEPSPLHTTTIVEKCTLKL 148 Q L C+ D + +LSA EYG + P T + +KC+ L Sbjct: 288 QRLNCQKPDIAEKYLSAAEYGITINGHPEIPETKDVKKKCSAGL 331
>TGT_HELHP (Q7VHX2) Queuine tRNA-ribosyltransferase (EC 2.4.2.29)| (tRNA-guanine transglycosylase) (Guanine insertion enzyme) Length = 381 Score = 29.3 bits (64), Expect = 9.6 Identities = 16/58 (27%), Positives = 30/58 (51%), Gaps = 2/58 (3%) Frame = +2 Query: 233 DNVVLIVTGTLHERDVNELLEKCHPLGMFD--SIASLAVAQNMRELYRLVLVDTPLAP 400 +N+ I+ G ++E ++ +G FD +I LAV + ++Y+ + TPL P Sbjct: 186 NNLFAIIQGGVNEHFRTLCAKQLVDMGDFDGFAIGGLAVGETSEQMYKTISFTTPLMP 243
>K1914_HUMAN (Q8N4X5) Protein KIAA1914| Length = 818 Score = 29.3 bits (64), Expect = 9.6 Identities = 14/44 (31%), Positives = 22/44 (50%) Frame = +2 Query: 17 QPLPCETLDDIKMHLSATEYGPYLQNEPSPLHTTTIVEKCTLKL 148 Q C+ D + +LSA+EYG + P T + +KC+ L Sbjct: 288 QRFNCQKPDIAEKYLSASEYGSSVDGHPEVPETKDVKKKCSAGL 331
>AROA_STRMU (Q8DUV8) 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19)| (5-enolpyruvylshikimate-3-phosphate synthase) (EPSP synthase) (EPSPS) Length = 427 Score = 29.3 bits (64), Expect = 9.6 Identities = 18/60 (30%), Positives = 30/60 (50%) Frame = +2 Query: 233 DNVVLIVTGTLHERDVNELLEKCHPLGMFDSIASLAVAQNMRELYRLVLVDTPLAPYFSE 412 D +++ LH VN + H +GM +IA+L V + EL R ++T +FS+ Sbjct: 363 DGMIIEGKTNLHGAKVNTFGD--HRIGMMTAIAALLVKEGEVELERAEAINTSYPTFFSD 420 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 88,185,946 Number of Sequences: 219361 Number of extensions: 1854823 Number of successful extensions: 4741 Number of sequences better than 10.0: 20 Number of HSP's better than 10.0 without gapping: 4569 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4735 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5538924943 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
