ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags18c01 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_192544.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1056 Score = 662 bits (334), Expect = 0.0 Identities = 542/610 (88%), Gaps = 1/610 (0%) Strand = Plus / Plus Query: 6 gccgattacaacaacctctgcc-gtgcgagaccctcgacgacatcaagatgcacctctcc 64 ||||| |||||||||||||||| |||||||| |||||||||| |||||||||||||| || Sbjct: 91 gccgactacaacaacctctgccagtgcgagaacctcgacgacgtcaagatgcacctcacc 150 Query: 65 gccaccgagtacggtccatacctccagaacgaaccttctcccttgcacacaacaacaatc 124 |||||||||||||| || |||||||||||||||||||| ||| |||||||||| ||||| Sbjct: 151 gccaccgagtacggcccctacctccagaacgaaccttcacccctgcacacaactacaatt 210 Query: 125 gtcgagaagtgcactcttaagttggttgatgaatacaaacacatgttgtgccaggcgaat 184 || ||||||||||||||||| |||||||||| |||||||||||| |||||||||||| | Sbjct: 211 gtggagaagtgcactcttaaactggttgatgagtacaaacacatgatgtgccaggcgact 270 Query: 185 gaacctctatctacattcctacaatacataacgtatggacacatgatcgataatgttgtc 244 ||||| ||||| |||||| |||| || ||||||||||| ||||||||||| |||||||| Sbjct: 271 gaaccactatccacattcttacagtatataacgtatggccacatgatcgacaatgttgta 330 Query: 245 cttattgttactgggacattgcatgaaagagatgtcaatgaactgttggagaaatgccat 304 ||||||||||| || ||||||||||| |||||||| |||||||| ||||||||||||||| Sbjct: 331 cttattgttaccggaacattgcatgagagagatgttaatgaactattggagaaatgccat 390 Query: 305 ccattgggcatgtttgatagcattgcatcgcttgcagttgctcaaaatatgcgtgagctt 364 |||||||| |||||||| ||||||||||| ||||||||||||||||||||||| |||||| Sbjct: 391 ccattgggaatgtttgacagcattgcatctcttgcagttgctcaaaatatgcgcgagctt 450 Query: 365 tacaggctggttctagttgatacacccttagcaccgtacttctcagagtgcattacatct 424 ||||| ||||| | ||||| ||||| ||||| || ||||||||||| |||||||||||| Sbjct: 451 tacagattggttttggttgacacaccgttagccccatacttctcagaatgcattacatct 510 Query: 425 gaggatctggatgacatgaatattgagatcatgaggaacacactctacaaagcgtatctt 484 |||||| |||||||||||||||| ||||| ||||||||||| || |||||||| || ||| Sbjct: 511 gaggatttggatgacatgaatatcgagattatgaggaacactctttacaaagcatacctt 570 Query: 485 caggatttttacaaattttgtgcgaaactaggtggtgcgacggctgacattatgtgtaat 544 |||| ||||||||||| |||| ||||| |||||||| || ||||| |||||||| || Sbjct: 571 gaggacttttacaaattctgtgaaaaacttggtggtgcaactgctgagattatgtgcgat 630 Query: 545 ctcctttcatttgaagctgacagaagagctgtaaacattacaataaacagtattgggact 604 || || ||||||||||| |||||||||||||| ||||||||||||||||||||||| || Sbjct: 631 cttctgtcatttgaagcagacagaagagctgtgaacattacaataaacagtattggtaca 690 Query: 605 gagctgacta 614 ||| |||||| Sbjct: 691 gagttgacta 700
>dbj|AK067605.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013111L13, full insert sequence Length = 1556 Score = 662 bits (334), Expect = 0.0 Identities = 542/610 (88%), Gaps = 1/610 (0%) Strand = Plus / Plus Query: 6 gccgattacaacaacctctgcc-gtgcgagaccctcgacgacatcaagatgcacctctcc 64 ||||| |||||||||||||||| |||||||| |||||||||| |||||||||||||| || Sbjct: 207 gccgactacaacaacctctgccagtgcgagaacctcgacgacgtcaagatgcacctcacc 266 Query: 65 gccaccgagtacggtccatacctccagaacgaaccttctcccttgcacacaacaacaatc 124 |||||||||||||| || |||||||||||||||||||| ||| |||||||||| ||||| Sbjct: 267 gccaccgagtacggcccctacctccagaacgaaccttcacccctgcacacaactacaatt 326 Query: 125 gtcgagaagtgcactcttaagttggttgatgaatacaaacacatgttgtgccaggcgaat 184 || ||||||||||||||||| |||||||||| |||||||||||| |||||||||||| | Sbjct: 327 gtggagaagtgcactcttaaactggttgatgagtacaaacacatgatgtgccaggcgact 386 Query: 185 gaacctctatctacattcctacaatacataacgtatggacacatgatcgataatgttgtc 244 ||||| ||||| |||||| |||| || ||||||||||| ||||||||||| |||||||| Sbjct: 387 gaaccactatccacattcttacagtatataacgtatggccacatgatcgacaatgttgta 446 Query: 245 cttattgttactgggacattgcatgaaagagatgtcaatgaactgttggagaaatgccat 304 ||||||||||| || ||||||||||| |||||||| |||||||| ||||||||||||||| Sbjct: 447 cttattgttaccggaacattgcatgagagagatgttaatgaactattggagaaatgccat 506 Query: 305 ccattgggcatgtttgatagcattgcatcgcttgcagttgctcaaaatatgcgtgagctt 364 |||||||| |||||||| ||||||||||| ||||||||||||||||||||||| |||||| Sbjct: 507 ccattgggaatgtttgacagcattgcatctcttgcagttgctcaaaatatgcgcgagctt 566 Query: 365 tacaggctggttctagttgatacacccttagcaccgtacttctcagagtgcattacatct 424 ||||| ||||| | ||||| ||||| ||||| || ||||||||||| |||||||||||| Sbjct: 567 tacagattggttttggttgacacaccgttagccccatacttctcagaatgcattacatct 626 Query: 425 gaggatctggatgacatgaatattgagatcatgaggaacacactctacaaagcgtatctt 484 |||||| |||||||||||||||| ||||| ||||||||||| || |||||||| || ||| Sbjct: 627 gaggatttggatgacatgaatatcgagattatgaggaacactctttacaaagcatacctt 686 Query: 485 caggatttttacaaattttgtgcgaaactaggtggtgcgacggctgacattatgtgtaat 544 |||| ||||||||||| |||| ||||| |||||||| || ||||| |||||||| || Sbjct: 687 gaggacttttacaaattctgtgaaaaacttggtggtgcaactgctgagattatgtgcgat 746 Query: 545 ctcctttcatttgaagctgacagaagagctgtaaacattacaataaacagtattgggact 604 || || ||||||||||| |||||||||||||| ||||||||||||||||||||||| || Sbjct: 747 cttctgtcatttgaagcagacagaagagctgtgaacattacaataaacagtattggtaca 806 Query: 605 gagctgacta 614 ||| |||||| Sbjct: 807 gagttgacta 816
>gb|AY104603.1| Zea mays PCO113315 mRNA sequence Length = 1601 Score = 658 bits (332), Expect = 0.0 Identities = 540/608 (88%), Gaps = 1/608 (0%) Strand = Plus / Plus Query: 6 gccgattacaacaacctctgcc-gtgcgagaccctcgacgacatcaagatgcacctctcc 64 ||||| |||||||||||||||| |||||||||||||||||||||||||||||||||| || Sbjct: 307 gccgactacaacaacctctgccagtgcgagaccctcgacgacatcaagatgcacctcacc 366 Query: 65 gccaccgagtacggtccatacctccagaacgaaccttctcccttgcacacaacaacaatc 124 |||||||||||||| || |||||||||||||||||||| |||||||||||||| ||||| Sbjct: 367 gccaccgagtacgggccctacctccagaacgaaccttcacccttgcacacaacgacaatt 426 Query: 125 gtcgagaagtgcactcttaagttggttgatgaatacaaacacatgttgtgccaggcgaat 184 || ||||||||||||||||| | || ||||| ||||| |||||| |||||||||| | | Sbjct: 427 gtggagaagtgcactcttaaactagtcgatgagtacaagcacatgctgtgccaggccact 486 Query: 185 gaacctctatctacattcctacaatacataacgtatggacacatgatcgataatgttgtc 244 ||||| |||||||| || | || || ||||| ||||| |||||||| || ||||||||| Sbjct: 487 gaaccactatctacgtttttgcagtatataacttatggccacatgattgacaatgttgtc 546 Query: 245 cttattgttactgggacattgcatgaaagagatgtcaatgaactgttggagaaatgccat 304 |||||||| ||||||||| ||||||| |||||||| || ||||| |||||||||||||| Sbjct: 547 cttattgtaactgggacactgcatgagagagatgttaacgaacttttggagaaatgccac 606 Query: 305 ccattgggcatgtttgatagcattgcatcgcttgcagttgctcaaaatatgcgtgagctt 364 ||||||||||||||||| ||||||||||| ||||| ||||||||||| |||||||||||| Sbjct: 607 ccattgggcatgtttgacagcattgcatcacttgctgttgctcaaaacatgcgtgagctt 666 Query: 365 tacaggctggttctagttgatacacccttagcaccgtacttctcagagtgcattacatct 424 || || |||||||||| |||||||| | || || |||||||||||||||||||||||| Sbjct: 667 tatagattggttctagtcgatacaccactggccccttacttctcagagtgcattacatct 726 Query: 425 gaggatctggatgacatgaatattgagatcatgaggaacacactctacaaagcgtatctt 484 |||||| |||||||||||||||||||||| ||||||||||| ||||||||||| |||||| Sbjct: 727 gaggatttggatgacatgaatattgagattatgaggaacactctctacaaagcatatctt 786 Query: 485 caggatttttacaaattttgtgcgaaactaggtggtgcgacggctgacattatgtgtaat 544 |||| || ||||||||||| ||||||||||||||| || ||||| || |||||| || Sbjct: 787 gaggacttctacaaattttgccagaaactaggtggtgcaacagctgagatcatgtgtgat 846 Query: 545 ctcctttcatttgaagctgacagaagagctgtaaacattacaataaacagtattgggact 604 |||||||||||||||||||||||||||||||| |||||||||||||| |||||||| ||| Sbjct: 847 ctcctttcatttgaagctgacagaagagctgttaacattacaataaatagtattggtact 906 Query: 605 gagctgac 612 ||| |||| Sbjct: 907 gagttgac 914
>emb|AJ439342.1|MCR439342 Mesembryanthemum crystallinum mRNA for putative vacuolar ATPase subunit d (vha-d gene) Length = 1141 Score = 242 bits (122), Expect = 1e-60 Identities = 380/466 (81%) Strand = Plus / Plus Query: 32 gagaccctcgacgacatcaagatgcacctctccgccaccgagtacggtccatacctccag 91 ||||| ||||| |||||||||||||| ||||| || || || || ||||| ||||| ||| Sbjct: 197 gagacactcgatgacatcaagatgcatctctctgctactgattatggtccttaccttcag 256 Query: 92 aacgaaccttctcccttgcacacaacaacaatcgtcgagaagtgcactcttaagttggtt 151 |||||||||||||| ||||||||||| || | || ||||||||||| |||||| ||| | Sbjct: 257 aacgaaccttctcctttgcacacaactacccttgtggagaagtgcacacttaagctgggt 316 Query: 152 gatgaatacaaacacatgttgtgccaggcgaatgaacctctatctacattcctacaatac 211 |||||||| || ||||||||||||||||| | |||||| |||| || ||| | ||||| Sbjct: 317 gatgaatataagcacatgttgtgccaggccacagaacctttatcaaccttcttggaatac 376 Query: 212 ataacgtatggacacatgatcgataatgttgtccttattgttactgggacattgcatgaa 271 || |||||||| |||||||| ||||||||||||||||||| ||| || || ||||| || Sbjct: 377 atcacgtatggtcacatgattgataatgttgtccttattggtaccggaaccttgcacgag 436 Query: 272 agagatgtcaatgaactgttggagaaatgccatccattgggcatgtttgatagcattgca 331 || ||||| | || | ||||||||||| || || ||||||||||||| || ||||| Sbjct: 437 agggatgttcaagagttattggagaaatgtcaccctctgggcatgtttgacaggattgct 496 Query: 332 tcgcttgcagttgctcaaaatatgcgtgagctttacaggctggttctagttgatacaccc 391 | | ||||||||||| |||||| | ||||| ||||| |||| || || || || ||| Sbjct: 497 accttggcagttgctcagaatatgagggagctgtacagattggtgcttgtggacactccc 556 Query: 392 ttagcaccgtacttctcagagtgcattacatctgaggatctggatgacatgaatattgag 451 || || || |||||||| ||||| || ||||||||||| ||||||| ||||| |||||| Sbjct: 557 ttggctccatacttctctgagtgtatcacatctgaggacttggatgatatgaacattgag 616 Query: 452 atcatgaggaacacactctacaaagcgtatcttcaggatttttaca 497 || |||||||| || ||||| ||||| || ||| ||||||| |||| Sbjct: 617 attatgaggaataccctctataaagcataccttgaggatttctaca 662
>gb|BT012808.1| Lycopersicon esculentum clone 113828F, mRNA sequence Length = 1534 Score = 236 bits (119), Expect = 7e-59 Identities = 332/403 (82%) Strand = Plus / Plus Query: 207 aatacataacgtatggacacatgatcgataatgttgtccttattgttactgggacattgc 266 ||||||| | |||||| |||||||| || ||||||||||| ||||| || || || |||| Sbjct: 393 aatacatcaggtatggccacatgattgacaatgttgtcctaattgtcaccggaactttgc 452 Query: 267 atgaaagagatgtcaatgaactgttggagaaatgccatccattgggcatgtttgatagca 326 |||| ||||||||| | ||||||||||||||||||||||| |||||||||||||| |||| Sbjct: 453 atgagagagatgtccaagaactgttggagaaatgccatcctttgggcatgtttgacagca 512 Query: 327 ttgcatcgcttgcagttgctcaaaatatgcgtgagctttacaggctggttctagttgata 386 |||| || | |||||||| || |||||| | || | ||||||||||| || ||||| | Sbjct: 513 ttgcttctttggcagttgcccagaatatgagggaattatacaggctggtgcttgttgaca 572 Query: 387 cacccttagcaccgtacttctcagagtgcattacatctgaggatctggatgacatgaata 446 ||||||| || || ||||| || ||||||||||| || ||||| ||||||||||||| | Sbjct: 573 cacccttggctccatacttttctgagtgcattacttcggaggacttggatgacatgaaca 632 Query: 447 ttgagatcatgaggaacacactctacaaagcgtatcttcaggatttttacaaattttgtg 506 ||||||| ||||| |||||||| ||||| || || ||| | ||||| |||| |||||| Sbjct: 633 ttgagattatgagaaacacactgtacaaggcataccttgaagatttctacagattttgcc 692 Query: 507 cgaaactaggtggtgcgacggctgacattatgtgtaatctcctttcatttgaagctgaca 566 |||| |||| ||||| || || || || |||| | || | ||||| ||||| || |||| Sbjct: 693 agaaattaggcggtgcaactgcagaaatcatgtctgatttgctttcttttgaggccgaca 752 Query: 567 gaagagctgtaaacattacaataaacagtattgggactgagct 609 |||||||||| || ||||| |||||||| ||||| |||||||| Sbjct: 753 gaagagctgttaatattactataaacagcattggcactgagct 795 Score = 40.1 bits (20), Expect = 8.4 Identities = 66/80 (82%), Gaps = 1/80 (1%) Strand = Plus / Plus Query: 12 tacaacaacctctgcc-gtgcgagaccctcgacgacatcaagatgcacctctccgccacc 70 |||||||| || |||| |||||| || || || |||||||||||||| || ||||| || Sbjct: 197 tacaacaatctatgccagtgcgaaactctagatgacatcaagatgcatctgtccgctact 256 Query: 71 gagtacggtccatacctcca 90 || |||||||| || ||||| Sbjct: 257 gaatacggtccttatctcca 276
>gb|AY714382.1| Aegiceras corniculatum vacuolar ATP synthase mRNA, partial cds Length = 439 Score = 147 bits (74), Expect = 5e-32 Identities = 305/382 (79%) Strand = Plus / Plus Query: 218 tatggacacatgatcgataatgttgtccttattgttactgggacattgcatgaaagagat 277 ||||| |||||||| || |||||||| || ||||| ||||| || ||||||||||| ||| Sbjct: 58 tatggtcacatgattgacaatgttgttctgattgtcactggaaccttgcatgaaagggat 117 Query: 278 gtcaatgaactgttggagaaatgccatccattgggcatgtttgatagcattgcatcgctt 337 || | || ||||||| ||||||||||| ||||| |||||||| || ||||| | || Sbjct: 118 gttcaggagttgttggaaaaatgccatcctttgggtatgtttgacagtattgccactctg 177 Query: 338 gcagttgctcaaaatatgcgtgagctttacaggctggttctagttgatacacccttagca 397 ||||||||||| |||||| | || || || || |||| || ||||||||||| |||| Sbjct: 178 gcagttgctcagaatatgagggatctgtatagattggtgcttgttgatacaccactagct 237 Query: 398 ccgtacttctcagagtgcattacatctgaggatctggatgacatgaatattgagatcatg 457 || || ||||| || ||||| ||||||||||| ||||||||||||| ||||| || ||| Sbjct: 238 ccatatttctctgaatgcatcacatctgaggacttggatgacatgaacattgaaataatg 297 Query: 458 aggaacacactctacaaagcgtatcttcaggatttttacaaattttgtgcgaaactaggt 517 ||||| ||||| ||||| || || ||| ||||||| || | || ||| |||||| || Sbjct: 298 aggaatacactttacaaggcataccttgaggatttctataggttctgtcagaaactgggg 357 Query: 518 ggtgcgacggctgacattatgtgtaatctcctttcatttgaagctgacagaagagctgta 577 ||||| || || || ||||||| | | |||||||| ||||||||||| | |||||||| Sbjct: 358 ggtgctactgcagagattatgtctgacctcctttcctttgaagctgatcggagagctgtt 417 Query: 578 aacattacaataaacagtattg 599 || || || |||||||| |||| Sbjct: 418 aatatcaccataaacagcattg 439
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 137 bits (69), Expect = 5e-29 Identities = 96/105 (91%) Strand = Plus / Minus Query: 217 gtatggacacatgatcgataatgttgtccttattgttactgggacattgcatgaaagaga 276 |||||| ||||||||||| |||||||| ||||||||||| || ||||||||||| ||||| Sbjct: 22854684 gtatggccacatgatcgacaatgttgtacttattgttaccggaacattgcatgagagaga 22854625 Query: 277 tgtcaatgaactgttggagaaatgccatccattgggcatgtttga 321 ||| |||||||| ||||||||||||||||||||||| |||||||| Sbjct: 22854624 tgttaatgaactattggagaaatgccatccattgggaatgtttga 22854580 Score = 129 bits (65), Expect = 1e-26 Identities = 110/125 (88%) Strand = Plus / Minus Query: 95 gaaccttctcccttgcacacaacaacaatcgtcgagaagtgcactcttaagttggttgat 154 |||||||| ||| |||||||||| ||||| || ||||||||||||||||| |||||||| Sbjct: 22854920 gaaccttcacccctgcacacaactacaattgtggagaagtgcactcttaaactggttgat 22854861 Query: 155 gaatacaaacacatgttgtgccaggcgaatgaacctctatctacattcctacaatacata 214 || |||||||||||| |||||||||||| |||||| ||||| |||||| |||| || ||| Sbjct: 22854860 gagtacaaacacatgatgtgccaggcgactgaaccactatccacattcttacagtatata 22854801 Query: 215 acgta 219 ||||| Sbjct: 22854800 acgta 22854796 Score = 127 bits (64), Expect = 5e-26 Identities = 97/108 (89%) Strand = Plus / Minus Query: 321 atagcattgcatcgcttgcagttgctcaaaatatgcgtgagctttacaggctggttctag 380 ||||||||||||| ||||||||||||||||||||||| ||||||||||| ||||| | | Sbjct: 22854500 atagcattgcatctcttgcagttgctcaaaatatgcgcgagctttacagattggttttgg 22854441 Query: 381 ttgatacacccttagcaccgtacttctcagagtgcattacatctgagg 428 |||| ||||| ||||| || ||||||||||| |||||||||||||||| Sbjct: 22854440 ttgacacaccgttagccccatacttctcagaatgcattacatctgagg 22854393 Score = 117 bits (59), Expect = 4e-23 Identities = 84/91 (92%), Gaps = 1/91 (1%) Strand = Plus / Minus Query: 6 gccgattacaacaacctctgcc-gtgcgagaccctcgacgacatcaagatgcacctctcc 64 ||||| |||||||||||||||| |||||||| |||||||||| |||||||||||||| || Sbjct: 22855622 gccgactacaacaacctctgccagtgcgagaacctcgacgacgtcaagatgcacctcacc 22855563 Query: 65 gccaccgagtacggtccatacctccagaacg 95 |||||||||||||| || ||||||||||||| Sbjct: 22855562 gccaccgagtacggcccctacctccagaacg 22855532 Score = 93.7 bits (47), Expect = 6e-16 Identities = 77/87 (88%) Strand = Plus / Minus Query: 508 gaaactaggtggtgcgacggctgacattatgtgtaatctcctttcatttgaagctgacag 567 |||||| |||||||| || ||||| |||||||| |||| || ||||||||||| ||||| Sbjct: 22854129 gaaacttggtggtgcaactgctgagattatgtgcgatcttctgtcatttgaagcagacag 22854070 Query: 568 aagagctgtaaacattacaataaacag 594 ||||||||| ||||||||||||||||| Sbjct: 22854069 aagagctgtgaacattacaataaacag 22854043 Score = 81.8 bits (41), Expect = 2e-12 Identities = 71/81 (87%) Strand = Plus / Minus Query: 426 aggatctggatgacatgaatattgagatcatgaggaacacactctacaaagcgtatcttc 485 ||||| |||||||||||||||| ||||| ||||||||||| || |||||||| || ||| Sbjct: 22854293 aggatttggatgacatgaatatcgagattatgaggaacactctttacaaagcataccttg 22854234 Query: 486 aggatttttacaaattttgtg 506 |||| ||||||||||| |||| Sbjct: 22854233 aggacttttacaaattctgtg 22854213
>dbj|AP003300.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0700A11 Length = 136321 Score = 137 bits (69), Expect = 5e-29 Identities = 96/105 (91%) Strand = Plus / Minus Query: 217 gtatggacacatgatcgataatgttgtccttattgttactgggacattgcatgaaagaga 276 |||||| ||||||||||| |||||||| ||||||||||| || ||||||||||| ||||| Sbjct: 58241 gtatggccacatgatcgacaatgttgtacttattgttaccggaacattgcatgagagaga 58182 Query: 277 tgtcaatgaactgttggagaaatgccatccattgggcatgtttga 321 ||| |||||||| ||||||||||||||||||||||| |||||||| Sbjct: 58181 tgttaatgaactattggagaaatgccatccattgggaatgtttga 58137 Score = 129 bits (65), Expect = 1e-26 Identities = 110/125 (88%) Strand = Plus / Minus Query: 95 gaaccttctcccttgcacacaacaacaatcgtcgagaagtgcactcttaagttggttgat 154 |||||||| ||| |||||||||| ||||| || ||||||||||||||||| |||||||| Sbjct: 58477 gaaccttcacccctgcacacaactacaattgtggagaagtgcactcttaaactggttgat 58418 Query: 155 gaatacaaacacatgttgtgccaggcgaatgaacctctatctacattcctacaatacata 214 || |||||||||||| |||||||||||| |||||| ||||| |||||| |||| || ||| Sbjct: 58417 gagtacaaacacatgatgtgccaggcgactgaaccactatccacattcttacagtatata 58358 Query: 215 acgta 219 ||||| Sbjct: 58357 acgta 58353 Score = 127 bits (64), Expect = 5e-26 Identities = 97/108 (89%) Strand = Plus / Minus Query: 321 atagcattgcatcgcttgcagttgctcaaaatatgcgtgagctttacaggctggttctag 380 ||||||||||||| ||||||||||||||||||||||| ||||||||||| ||||| | | Sbjct: 58057 atagcattgcatctcttgcagttgctcaaaatatgcgcgagctttacagattggttttgg 57998 Query: 381 ttgatacacccttagcaccgtacttctcagagtgcattacatctgagg 428 |||| ||||| ||||| || ||||||||||| |||||||||||||||| Sbjct: 57997 ttgacacaccgttagccccatacttctcagaatgcattacatctgagg 57950 Score = 117 bits (59), Expect = 4e-23 Identities = 84/91 (92%), Gaps = 1/91 (1%) Strand = Plus / Minus Query: 6 gccgattacaacaacctctgcc-gtgcgagaccctcgacgacatcaagatgcacctctcc 64 ||||| |||||||||||||||| |||||||| |||||||||| |||||||||||||| || Sbjct: 59179 gccgactacaacaacctctgccagtgcgagaacctcgacgacgtcaagatgcacctcacc 59120 Query: 65 gccaccgagtacggtccatacctccagaacg 95 |||||||||||||| || ||||||||||||| Sbjct: 59119 gccaccgagtacggcccctacctccagaacg 59089 Score = 93.7 bits (47), Expect = 6e-16 Identities = 77/87 (88%) Strand = Plus / Minus Query: 508 gaaactaggtggtgcgacggctgacattatgtgtaatctcctttcatttgaagctgacag 567 |||||| |||||||| || ||||| |||||||| |||| || ||||||||||| ||||| Sbjct: 57686 gaaacttggtggtgcaactgctgagattatgtgcgatcttctgtcatttgaagcagacag 57627 Query: 568 aagagctgtaaacattacaataaacag 594 ||||||||| ||||||||||||||||| Sbjct: 57626 aagagctgtgaacattacaataaacag 57600 Score = 81.8 bits (41), Expect = 2e-12 Identities = 71/81 (87%) Strand = Plus / Minus Query: 426 aggatctggatgacatgaatattgagatcatgaggaacacactctacaaagcgtatcttc 485 ||||| |||||||||||||||| ||||| ||||||||||| || |||||||| || ||| Sbjct: 57850 aggatttggatgacatgaatatcgagattatgaggaacactctttacaaagcataccttg 57791 Query: 486 aggatttttacaaattttgtg 506 |||| ||||||||||| |||| Sbjct: 57790 aggacttttacaaattctgtg 57770
>ref|NM_113791.2| Arabidopsis thaliana hydrogen-transporting ATP synthase, rotational mechanism / hydrogen-transporting ATPase, rotational mechanism AT3G28710 mRNA, complete cds Length = 1429 Score = 119 bits (60), Expect = 1e-23 Identities = 381/488 (78%) Strand = Plus / Plus Query: 32 gagaccctcgacgacatcaagatgcacctctccgccaccgagtacggtccatacctccag 91 |||| ||| ||||| ||||||||||| ||||| |||||| | ||||| | || ||||| Sbjct: 251 gagaacctagacgatatcaagatgcatctctctgccaccaaatacggctcttatctccaa 310 Query: 92 aacgaaccttctcccttgcacacaacaacaatcgtcgagaagtgcactcttaagttggtt 151 |||||||| || || |||| || || || || || |||||||| ||||||||| | ||| Sbjct: 311 aacgaaccgtcacctctgcataccaccaccattgtggagaagtgtactcttaagcttgtt 370 Query: 152 gatgaatacaaacacatgttgtgccaggcgaatgaacctctatctacattcctacaatac 211 ||||| ||||| || ||| | ||||| || | ||| || | ||||| || || | ||| Sbjct: 371 gatgactacaagcatatgctttgccaagctactgagccaatgtctacctttttagagtac 430 Query: 212 ataacgtatggacacatgatcgataatgttgtccttattgttactgggacattgcatgaa 271 || | ||||| |||||||| || ||||| || || ||||||||||| || ||||||| Sbjct: 431 atcagatatggccacatgattgacaatgtcgtgctcattgttactggaaccctgcatgag 490 Query: 272 agagatgtcaatgaactgttggagaaatgccatccattgggcatgtttgatagcattgca 331 |||||||| | || || | |||||||| || || || ||||||||||| || ||||| Sbjct: 491 agagatgttcaagagttgattgagaaatgtcaccctttaggcatgtttgacagtattgct 550 Query: 332 tcgcttgcagttgctcaaaatatgcgtgagctttacaggctggttctagttgatacaccc 391 | || ||||||||||| || ||||| || || ||| || |||| || || ||||| || Sbjct: 551 acactagcagttgctcagaacatgcgggaactctaccggttggtgcttgtggatactcct 610 Query: 392 ttagcaccgtacttctcagagtgcattacatctgaggatctggatgacatgaatattgag 451 || || || ||||| || || ||| | || || |||||||| ||||||||||| || ||| Sbjct: 611 ttggctccatacttttctgaatgcttaacgtcagaggatctcgatgacatgaacatagag 670 Query: 452 atcatgaggaacacactctacaaagcgtatcttcaggatttttacaaattttgtgcgaaa 511 || ||||||||||| ||||||||||| || ||| ||||||||||||| || ||| |||| Sbjct: 671 attatgaggaacaccctctacaaagcataccttgaggatttttacaagttctgtcagaaa 730 Query: 512 ctaggtgg 519 || ||||| Sbjct: 731 cttggtgg 738
>gb|AY142622.1| Arabidopsis thaliana putative adenosine triphosphatase (At3g28710) mRNA, complete cds Length = 1087 Score = 119 bits (60), Expect = 1e-23 Identities = 381/488 (78%) Strand = Plus / Plus Query: 32 gagaccctcgacgacatcaagatgcacctctccgccaccgagtacggtccatacctccag 91 |||| ||| ||||| ||||||||||| ||||| |||||| | ||||| | || ||||| Sbjct: 118 gagaacctagacgatatcaagatgcatctctctgccaccaaatacggctcttatctccaa 177 Query: 92 aacgaaccttctcccttgcacacaacaacaatcgtcgagaagtgcactcttaagttggtt 151 |||||||| || || |||| || || || || || |||||||| ||||||||| | ||| Sbjct: 178 aacgaaccgtcacctctgcataccaccaccattgtggagaagtgtactcttaagcttgtt 237 Query: 152 gatgaatacaaacacatgttgtgccaggcgaatgaacctctatctacattcctacaatac 211 ||||| ||||| || ||| | ||||| || | ||| || | ||||| || || | ||| Sbjct: 238 gatgactacaagcatatgctttgccaagctactgagccaatgtctacctttttagagtac 297 Query: 212 ataacgtatggacacatgatcgataatgttgtccttattgttactgggacattgcatgaa 271 || | ||||| |||||||| || ||||| || || ||||||||||| || ||||||| Sbjct: 298 atcagatatggccacatgattgacaatgtcgtgctcattgttactggaaccctgcatgag 357 Query: 272 agagatgtcaatgaactgttggagaaatgccatccattgggcatgtttgatagcattgca 331 |||||||| | || || | |||||||| || || || ||||||||||| || ||||| Sbjct: 358 agagatgttcaagagttgattgagaaatgtcaccctttaggcatgtttgacagtattgct 417 Query: 332 tcgcttgcagttgctcaaaatatgcgtgagctttacaggctggttctagttgatacaccc 391 | || ||||||||||| || ||||| || || ||| || |||| || || ||||| || Sbjct: 418 acactagcagttgctcagaacatgcgggaactctaccggttggtgcttgtggatactcct 477 Query: 392 ttagcaccgtacttctcagagtgcattacatctgaggatctggatgacatgaatattgag 451 || || || ||||| || || ||| | || || |||||||| ||||||||||| || ||| Sbjct: 478 ttggctccatacttttctgaatgcttaacgtcagaggatctcgatgacatgaacatagag 537 Query: 452 atcatgaggaacacactctacaaagcgtatcttcaggatttttacaaattttgtgcgaaa 511 || ||||||||||| ||||||||||| || ||| ||||||||||||| || ||| |||| Sbjct: 538 attatgaggaacaccctctacaaagcataccttgaggatttttacaagttctgtcagaaa 597 Query: 512 ctaggtgg 519 || ||||| Sbjct: 598 cttggtgg 605
>gb|AY077656.1| Arabidopsis thaliana AT3g28710/MZN14_20 mRNA, complete cds Length = 1056 Score = 119 bits (60), Expect = 1e-23 Identities = 381/488 (78%) Strand = Plus / Plus Query: 32 gagaccctcgacgacatcaagatgcacctctccgccaccgagtacggtccatacctccag 91 |||| ||| ||||| ||||||||||| ||||| |||||| | ||||| | || ||||| Sbjct: 118 gagaacctagacgatatcaagatgcatctctctgccaccaaatacggctcttatctccaa 177 Query: 92 aacgaaccttctcccttgcacacaacaacaatcgtcgagaagtgcactcttaagttggtt 151 |||||||| || || |||| || || || || || |||||||| ||||||||| | ||| Sbjct: 178 aacgaaccgtcacctctgcataccaccaccattgtggagaagtgtactcttaagcttgtt 237 Query: 152 gatgaatacaaacacatgttgtgccaggcgaatgaacctctatctacattcctacaatac 211 ||||| ||||| || ||| | ||||| || | ||| || | ||||| || || | ||| Sbjct: 238 gatgactacaagcatatgctttgccaagctactgagccaatgtctacctttttagagtac 297 Query: 212 ataacgtatggacacatgatcgataatgttgtccttattgttactgggacattgcatgaa 271 || | ||||| |||||||| || ||||| || || ||||||||||| || ||||||| Sbjct: 298 atcagatatggccacatgattgacaatgtcgtgctcattgttactggaaccctgcatgag 357 Query: 272 agagatgtcaatgaactgttggagaaatgccatccattgggcatgtttgatagcattgca 331 |||||||| | || || | |||||||| || || || ||||||||||| || ||||| Sbjct: 358 agagatgttcaagagttgattgagaaatgtcaccctttaggcatgtttgacagtattgct 417 Query: 332 tcgcttgcagttgctcaaaatatgcgtgagctttacaggctggttctagttgatacaccc 391 | || ||||||||||| || ||||| || || ||| || |||| || || ||||| || Sbjct: 418 acactagcagttgctcagaacatgcgggaactctaccggttggtgcttgtggatactcct 477 Query: 392 ttagcaccgtacttctcagagtgcattacatctgaggatctggatgacatgaatattgag 451 || || || ||||| || || ||| | || || |||||||| ||||||||||| || ||| Sbjct: 478 ttggctccatacttttctgaatgcttaacgtcagaggatctcgatgacatgaacatagag 537 Query: 452 atcatgaggaacacactctacaaagcgtatcttcaggatttttacaaattttgtgcgaaa 511 || ||||||||||| ||||||||||| || ||| ||||||||||||| || ||| |||| Sbjct: 538 attatgaggaacaccctctacaaagcataccttgaggatttttacaagttctgtcagaaa 597 Query: 512 ctaggtgg 519 || ||||| Sbjct: 598 cttggtgg 605
>gb|AY039864.1| Arabidopsis thaliana AT3g28710/MZN14_20 mRNA, complete cds Length = 1429 Score = 119 bits (60), Expect = 1e-23 Identities = 381/488 (78%) Strand = Plus / Plus Query: 32 gagaccctcgacgacatcaagatgcacctctccgccaccgagtacggtccatacctccag 91 |||| ||| ||||| ||||||||||| ||||| |||||| | ||||| | || ||||| Sbjct: 251 gagaacctagacgatatcaagatgcatctctctgccaccaaatacggctcttatctccaa 310 Query: 92 aacgaaccttctcccttgcacacaacaacaatcgtcgagaagtgcactcttaagttggtt 151 |||||||| || || |||| || || || || || |||||||| ||||||||| | ||| Sbjct: 311 aacgaaccgtcacctctgcataccaccaccattgtggagaagtgtactcttaagcttgtt 370 Query: 152 gatgaatacaaacacatgttgtgccaggcgaatgaacctctatctacattcctacaatac 211 ||||| ||||| || ||| | ||||| || | ||| || | ||||| || || | ||| Sbjct: 371 gatgactacaagcatatgctttgccaagctactgagccaatgtctacctttttagagtac 430 Query: 212 ataacgtatggacacatgatcgataatgttgtccttattgttactgggacattgcatgaa 271 || | ||||| |||||||| || ||||| || || ||||||||||| || ||||||| Sbjct: 431 atcagatatggccacatgattgacaatgtcgtgctcattgttactggaaccctgcatgag 490 Query: 272 agagatgtcaatgaactgttggagaaatgccatccattgggcatgtttgatagcattgca 331 |||||||| | || || | |||||||| || || || ||||||||||| || ||||| Sbjct: 491 agagatgttcaagagttgattgagaaatgtcaccctttaggcatgtttgacagtattgct 550 Query: 332 tcgcttgcagttgctcaaaatatgcgtgagctttacaggctggttctagttgatacaccc 391 | || ||||||||||| || ||||| || || ||| || |||| || || ||||| || Sbjct: 551 acactagcagttgctcagaacatgcgggaactctaccggttggtgcttgtggatactcct 610 Query: 392 ttagcaccgtacttctcagagtgcattacatctgaggatctggatgacatgaatattgag 451 || || || ||||| || || ||| | || || |||||||| ||||||||||| || ||| Sbjct: 611 ttggctccatacttttctgaatgcttaacgtcagaggatctcgatgacatgaacatagag 670 Query: 452 atcatgaggaacacactctacaaagcgtatcttcaggatttttacaaattttgtgcgaaa 511 || ||||||||||| ||||||||||| || ||| ||||||||||||| || ||| |||| Sbjct: 671 attatgaggaacaccctctacaaagcataccttgaggatttttacaagttctgtcagaaa 730 Query: 512 ctaggtgg 519 || ||||| Sbjct: 731 cttggtgg 738
>gb|AY089082.1| Arabidopsis thaliana clone 29760 mRNA, complete sequence Length = 1363 Score = 119 bits (60), Expect = 1e-23 Identities = 381/488 (78%) Strand = Plus / Plus Query: 32 gagaccctcgacgacatcaagatgcacctctccgccaccgagtacggtccatacctccag 91 |||| ||| ||||| ||||||||||| ||||| |||||| | ||||| | || ||||| Sbjct: 197 gagaacctagacgatatcaagatgcatctctctgccaccaaatacggctcttatctccaa 256 Query: 92 aacgaaccttctcccttgcacacaacaacaatcgtcgagaagtgcactcttaagttggtt 151 |||||||| || || |||| || || || || || |||||||| ||||||||| | ||| Sbjct: 257 aacgaaccgtcacctctgcataccaccaccattgtggagaagtgtactcttaagcttgtt 316 Query: 152 gatgaatacaaacacatgttgtgccaggcgaatgaacctctatctacattcctacaatac 211 ||||| ||||| || ||| | ||||| || | ||| || | ||||| || || | ||| Sbjct: 317 gatgactacaagcatatgctttgccaagctactgagccaatgtctacctttttagagtac 376 Query: 212 ataacgtatggacacatgatcgataatgttgtccttattgttactgggacattgcatgaa 271 || | ||||| |||||||| || ||||| || || ||||||||||| || ||||||| Sbjct: 377 atcagatatggccacatgattgacaatgtcgtgctcattgttactggaaccctgcatgag 436 Query: 272 agagatgtcaatgaactgttggagaaatgccatccattgggcatgtttgatagcattgca 331 |||||||| | || || | |||||||| || || || ||||||||||| || ||||| Sbjct: 437 agagatgttcaagagttgattgagaaatgtcaccctttaggcatgtttgacagtattgct 496 Query: 332 tcgcttgcagttgctcaaaatatgcgtgagctttacaggctggttctagttgatacaccc 391 | || ||||||||||| || ||||| || || ||| || |||| || || ||||| || Sbjct: 497 acactagcagttgctcagaacatgcgggaactctaccggttggtgcttgtcgatactcct 556 Query: 392 ttagcaccgtacttctcagagtgcattacatctgaggatctggatgacatgaatattgag 451 || || || ||||| || || ||| | || || |||||||| ||||||||||| || ||| Sbjct: 557 ttggctccatacttttctgaatgcttaacgtcagaggatctcgatgacatgaacatagag 616 Query: 452 atcatgaggaacacactctacaaagcgtatcttcaggatttttacaaattttgtgcgaaa 511 || ||||||||||| ||||||||||| || ||| ||||||||||||| || ||| |||| Sbjct: 617 attatgaggaacaccctctacaaagcataccttgaggatttttacaagttctgtcagaaa 676 Query: 512 ctaggtgg 519 || ||||| Sbjct: 677 cttggtgg 684
>gb|AF327534.1| Arabidopsis thaliana putative adenosine triphosphatase (At3g28710) mRNA, complete cds Length = 1421 Score = 111 bits (56), Expect = 3e-21 Identities = 380/488 (77%) Strand = Plus / Plus Query: 32 gagaccctcgacgacatcaagatgcacctctccgccaccgagtacggtccatacctccag 91 |||| ||| ||||| ||||||||||| ||||| |||||| | ||||| | || ||||| Sbjct: 234 gagaacctagacgatatcaagatgcatctctctgccaccaaatacggctcttatctccaa 293 Query: 92 aacgaaccttctcccttgcacacaacaacaatcgtcgagaagtgcactcttaagttggtt 151 |||||||| || || |||| || || || || || |||||||| ||||||||| | ||| Sbjct: 294 aacgaaccgtcacctctgcataccaccaccattgtggagaagtgtactcttaagcttgtt 353 Query: 152 gatgaatacaaacacatgttgtgccaggcgaatgaacctctatctacattcctacaatac 211 ||||| ||||| || ||| | ||||| || | ||| || | ||||| || || | ||| Sbjct: 354 gatgactacaagcatatgctttgccaagctactgagccaatgtctacctttttagagtac 413 Query: 212 ataacgtatggacacatgatcgataatgttgtccttattgttactgggacattgcatgaa 271 || | ||||| |||||||| || ||||| || || ||||||||||| || ||||||| Sbjct: 414 atcagatatggccacatgattgacaatgtcgtgctcattgttactggaaccctgcatgag 473 Query: 272 agagatgtcaatgaactgttggagaaatgccatccattgggcatgtttgatagcattgca 331 |||||||| | || || | |||||||| || || || ||||||||||| || ||||| Sbjct: 474 agagatgttcaagagttgattgagaaatgtcaccctttaggcatgtttgacagtattgct 533 Query: 332 tcgcttgcagttgctcaaaatatgcgtgagctttacaggctggttctagttgatacaccc 391 | || ||||||||||| || ||||| || || ||| || |||| || || ||||| || Sbjct: 534 acactagcagttgctcagaacatgcgggaactctaccggttggtgcttgtggatactcct 593 Query: 392 ttagcaccgtacttctcagagtgcattacatctgaggatctggatgacatgaatattgag 451 || || || ||||| || || ||| | || || |||||||| |||||||| || || ||| Sbjct: 594 ttggctccatacttttctgaatgcttaacgtcagaggatctcgatgacattaacatagag 653 Query: 452 atcatgaggaacacactctacaaagcgtatcttcaggatttttacaaattttgtgcgaaa 511 || ||||||||||| ||||||||||| || ||| ||||||||||||| || ||| |||| Sbjct: 654 attatgaggaacaccctctacaaagcataccttgaggatttttacaagttctgtcagaaa 713 Query: 512 ctaggtgg 519 || ||||| Sbjct: 714 cttggtgg 721
>gb|AF324679.2|AF324679 Arabidopsis thaliana AT3g28710 (AT3g28710/MZN14_20) mRNA, complete cds Length = 1400 Score = 111 bits (56), Expect = 3e-21 Identities = 380/488 (77%) Strand = Plus / Plus Query: 32 gagaccctcgacgacatcaagatgcacctctccgccaccgagtacggtccatacctccag 91 |||| ||| ||||| ||||||||||| ||||| |||||| | ||||| | || ||||| Sbjct: 234 gagaacctagacgatatcaagatgcatctctctgccaccaaatacggctcttatctccaa 293 Query: 92 aacgaaccttctcccttgcacacaacaacaatcgtcgagaagtgcactcttaagttggtt 151 |||||||| || || |||| || || || || || |||||||| ||||||||| | ||| Sbjct: 294 aacgaaccgtcacctctgcataccaccaccattgtggagaagtgtactcttaagcttgtt 353 Query: 152 gatgaatacaaacacatgttgtgccaggcgaatgaacctctatctacattcctacaatac 211 ||||| ||||| || ||| | ||||| || | ||| || | ||||| || || | ||| Sbjct: 354 gatgactacaagcatatgctttgccaagctactgagccaatgtctacctttttagagtac 413 Query: 212 ataacgtatggacacatgatcgataatgttgtccttattgttactgggacattgcatgaa 271 || | ||||| |||||||| || ||||| || || ||||||||||| || ||||||| Sbjct: 414 atcagatatggccacatgattgacaatgtcgtgctcattgttactggaaccctgcatgag 473 Query: 272 agagatgtcaatgaactgttggagaaatgccatccattgggcatgtttgatagcattgca 331 |||||||| | || || | |||||||| || || || ||||||||||| || ||||| Sbjct: 474 agagatgttcaagagttgattgagaaatgtcaccctttaggcatgtttgacagtattgct 533 Query: 332 tcgcttgcagttgctcaaaatatgcgtgagctttacaggctggttctagttgatacaccc 391 | || ||||||||||| || ||||| || || ||| || |||| || || ||||| || Sbjct: 534 acactagcagttgctcagaacatgcgggaactctaccggttggtgcttgtggatactcct 593 Query: 392 ttagcaccgtacttctcagagtgcattacatctgaggatctggatgacatgaatattgag 451 || || || ||||| || || ||| | || || |||||||| |||||||| || || ||| Sbjct: 594 ttggctccatacttttctgaatgcttaacgtcagaggatctcgatgacattaacatagag 653 Query: 452 atcatgaggaacacactctacaaagcgtatcttcaggatttttacaaattttgtgcgaaa 511 || ||||||||||| ||||||||||| || ||| ||||||||||||| || ||| |||| Sbjct: 654 attatgaggaacaccctctacaaagcataccttgaggatttttacaagttctgtcagaaa 713 Query: 512 ctaggtgg 519 || ||||| Sbjct: 714 cttggtgg 721
>gb|AC169177.4| Medicago truncatula chromosome 7 BAC clone mth2-1p4, complete sequence Length = 124443 Score = 91.7 bits (46), Expect = 3e-15 Identities = 91/106 (85%) Strand = Plus / Plus Query: 323 agcattgcatcgcttgcagttgctcaaaatatgcgtgagctttacaggctggttctagtt 382 ||||||||| | || ||||||||||| |||||||| |||||||||||||||||||| ||| Sbjct: 63029 agcattgcaactctggcagttgctcagaatatgcgggagctttacaggctggttcttgtt 63088 Query: 383 gatacacccttagcaccgtacttctcagagtgcattacatctgagg 428 || || || | || || |||||||| |||||||||||||| |||| Sbjct: 63089 gacactcctctggctccatacttctctgagtgcattacatcagagg 63134 Score = 79.8 bits (40), Expect = 1e-11 Identities = 88/104 (84%) Strand = Plus / Plus Query: 218 tatggacacatgatcgataatgttgtccttattgttactgggacattgcatgaaagagat 277 ||||| |||||||| || |||||||| | ||||||||||| || |||||||| |||||| Sbjct: 106256 tatggtcacatgatagacaatgttgttttgattgttactggcaccttgcatgagagagat 106315 Query: 278 gtcaatgaactgttggagaaatgccatccattgggcatgtttga 321 ||| | ||||| | || |||||||||||| ||||||||||||| Sbjct: 106316 gtccaagaacttctagaaaaatgccatccactgggcatgtttga 106359 Score = 77.8 bits (39), Expect = 4e-11 Identities = 66/75 (88%) Strand = Plus / Plus Query: 95 gaaccttctcccttgcacacaacaacaatcgtcgagaagtgcactcttaagttggttgat 154 ||||||||||| ||||| ||||||||||| || ||||| || ||||||||| |||||||| Sbjct: 105913 gaaccttctccgttgcatacaacaacaattgtggagaaatgtactcttaagctggttgat 105972 Query: 155 gaatacaaacacatg 169 || ||||| |||||| Sbjct: 105973 gattacaagcacatg 105987 Score = 77.8 bits (39), Expect = 4e-11 Identities = 78/91 (85%) Strand = Plus / Plus Query: 338 gcagttgctcaaaatatgcgtgagctttacaggctggttctagttgatacacccttagca 397 ||||||||||| |||||| | |||||||||||||| ||||| ||||| || || | || Sbjct: 48835 gcagttgctcagaatatgagggagctttacaggcttgttcttgttgacactcctctggct 48894 Query: 398 ccgtacttctcagagtgcattacatctgagg 428 || |||||||| ||||||||||||||||||| Sbjct: 48895 ccatacttctcggagtgcattacatctgagg 48925 Score = 71.9 bits (36), Expect = 2e-09 Identities = 87/104 (83%) Strand = Plus / Plus Query: 218 tatggacacatgatcgataatgttgtccttattgttactgggacattgcatgaaagagat 277 ||||| |||||||| || |||||||| | ||||||||||| || |||||||| |||||| Sbjct: 48617 tatggtcacatgattgacaatgttgttttgattgttactggcaccttgcatgagagagat 48676 Query: 278 gtcaatgaactgttggagaaatgccatccattgggcatgtttga 321 ||| | ||||| | || |||||||||||| |||| |||||||| Sbjct: 48677 gtccaagaacttctagaaaaatgccatccactggggatgtttga 48720 Score = 65.9 bits (33), Expect = 1e-07 Identities = 72/85 (84%) Strand = Plus / Plus Query: 344 gctcaaaatatgcgtgagctttacaggctggttctagttgatacacccttagcaccgtac 403 ||||| |||||| | |||||||||||||||||||| ||||| || || | || || ||| Sbjct: 106501 gctcagaatatgagggagctttacaggctggttcttgttgacactcctctggctccatac 106560 Query: 404 ttctcagagtgcattacatctgagg 428 ||||| |||||||||||||| |||| Sbjct: 106561 ttctctgagtgcattacatcagagg 106585 Score = 60.0 bits (30), Expect = 9e-06 Identities = 63/74 (85%) Strand = Plus / Plus Query: 432 tggatgacatgaatattgagatcatgaggaacacactctacaaagcgtatcttcaggatt 491 ||||||||||||| ||||| || ||||||||||| || ||||| || || ||| | |||| Sbjct: 106957 tggatgacatgaacattgaaataatgaggaacactctttacaaggcataccttgaagatt 107016 Query: 492 tttacaaattttgt 505 |||||| ||||||| Sbjct: 107017 tttacagattttgt 107030 Score = 60.0 bits (30), Expect = 9e-06 Identities = 63/74 (85%) Strand = Plus / Plus Query: 432 tggatgacatgaatattgagatcatgaggaacacactctacaaagcgtatcttcaggatt 491 ||||||||||||| ||||| || ||||||||||| || ||||| || || ||| | |||| Sbjct: 49239 tggatgacatgaacattgaaataatgaggaacactctttacaaggcataccttgaagatt 49298 Query: 492 tttacaaattttgt 505 |||||| ||||||| Sbjct: 49299 tttacagattttgt 49312
>gb|AC155348.1| Brassica rapa subsp. pekinensis chromosome Cytogenetic chromosome 1 clone KBrH097M21, complete sequence Length = 131063 Score = 91.7 bits (46), Expect = 3e-15 Identities = 68/74 (91%), Gaps = 1/74 (1%) Strand = Plus / Minus Query: 6 gccgattacaacaacctctgcc-gtgcgagaccctcgacgacatcaagatgcacctctcc 64 |||||||||||||| ||||||| ||| || | |||||||||||||||||||||||||||| Sbjct: 98460 gccgattacaacaatctctgccagtgtgaaaacctcgacgacatcaagatgcacctctcc 98401 Query: 65 gccaccgagtacgg 78 |||||| ||||||| Sbjct: 98400 gccaccaagtacgg 98387 Score = 87.7 bits (44), Expect = 4e-14 Identities = 68/76 (89%) Strand = Plus / Minus Query: 426 aggatctggatgacatgaatattgagatcatgaggaacacactctacaaagcgtatcttc 485 ||||| ||||||||||||| || ||||| ||| ||||||||||||||||||| || ||| Sbjct: 97159 aggatttggatgacatgaacatagagattatgcggaacacactctacaaagcataccttg 97100 Query: 486 aggatttttacaaatt 501 |||||||||||||||| Sbjct: 97099 aggatttttacaaatt 97084 Score = 54.0 bits (27), Expect = 6e-04 Identities = 87/107 (81%) Strand = Plus / Minus Query: 218 tatggacacatgatcgataatgttgtccttattgttactgggacattgcatgaaagagat 277 ||||| || ||||| || |||||||| || ||||||||||| || ||||| || |||||| Sbjct: 97506 tatggccatatgattgacaatgttgtactaattgttactggaactttgcacgagagagat 97447 Query: 278 gtcaatgaactgttggagaaatgccatccattgggcatgtttgatag 324 || | || ||| | |||||||| || || || |||||||||||||| Sbjct: 97446 gttcaagagctgatcgagaaatgtcaccctttaggcatgtttgatag 97400
>ref|NM_113792.1| Arabidopsis thaliana hydrogen-transporting ATP synthase, rotational mechanism / hydrogen-transporting ATPase, rotational mechanism AT3G28715 mRNA, complete cds Length = 1056 Score = 81.8 bits (41), Expect = 2e-12 Identities = 86/101 (85%) Strand = Plus / Plus Query: 419 acatctgaggatctggatgacatgaatattgagatcatgaggaacacactctacaaagcg 478 ||||| |||||||| ||||||||||| || ||||| |||||||| || ||||||||||| Sbjct: 505 acatcagaggatctcgatgacatgaacatagagattatgaggaataccctctacaaagca 564 Query: 479 tatcttcaggatttttacaaattttgtgcgaaactaggtgg 519 || ||| ||||||||||||| || ||| |||||| ||||| Sbjct: 565 taccttgaggatttttacaacttctgtcagaaacttggtgg 605 Score = 75.8 bits (38), Expect = 2e-10 Identities = 129/158 (81%), Gaps = 1/158 (0%) Strand = Plus / Plus Query: 6 gccgattacaacaacctctgcc-gtgcgagaccctcgacgacatcaagatgcacctctcc 64 |||||||||||||| || || | ||| |||| ||| ||||| ||||||||||| ||||| Sbjct: 91 gccgattacaacaatctatgtcagtgtgagaacctagacgatatcaagatgcatctctct 150 Query: 65 gccaccgagtacggtccatacctccagaacgaaccttctcccttgcacacaacaacaatc 124 |||||| | |||||||| |||||||| |||||||| || || |||| || || ||||| Sbjct: 151 gccaccaaatacggtccttacctccaaaacgaaccatcacctctgcataccactacaatt 210 Query: 125 gtcgagaagtgcactcttaagttggttgatgaatacaa 162 || |||||||| || || ||| | |||||||| ||||| Sbjct: 211 gtggagaagtgtacgctcaagcttgttgatgactacaa 248
>gb|BT000154.1| Arabidopsis thaliana Unknown protein (At3g28715) mRNA, complete cds Length = 1207 Score = 81.8 bits (41), Expect = 2e-12 Identities = 86/101 (85%) Strand = Plus / Plus Query: 419 acatctgaggatctggatgacatgaatattgagatcatgaggaacacactctacaaagcg 478 ||||| |||||||| ||||||||||| || ||||| |||||||| || ||||||||||| Sbjct: 505 acatcagaggatctcgatgacatgaacatagagattatgaggaataccctctacaaagca 564 Query: 479 tatcttcaggatttttacaaattttgtgcgaaactaggtgg 519 || ||| ||||||||||||| || ||| |||||| ||||| Sbjct: 565 taccttgaggatttttacaacttctgtcagaaacttggtgg 605 Score = 75.8 bits (38), Expect = 2e-10 Identities = 129/158 (81%), Gaps = 1/158 (0%) Strand = Plus / Plus Query: 6 gccgattacaacaacctctgcc-gtgcgagaccctcgacgacatcaagatgcacctctcc 64 |||||||||||||| || || | ||| |||| ||| ||||| ||||||||||| ||||| Sbjct: 91 gccgattacaacaatctatgtcagtgtgagaacctagacgatatcaagatgcatctctct 150 Query: 65 gccaccgagtacggtccatacctccagaacgaaccttctcccttgcacacaacaacaatc 124 |||||| | |||||||| |||||||| |||||||| || || |||| || || ||||| Sbjct: 151 gccaccaaatacggtccttacctccaaaacgaaccatcacctctgcataccactacaatt 210 Query: 125 gtcgagaagtgcactcttaagttggttgatgaatacaa 162 || |||||||| || || ||| | |||||||| ||||| Sbjct: 211 gtggagaagtgtacgctcaagcttgttgatgactacaa 248
>gb|AY062635.1| Arabidopsis thaliana Unknown protein mRNA, complete cds Length = 1422 Score = 81.8 bits (41), Expect = 2e-12 Identities = 86/101 (85%) Strand = Plus / Plus Query: 419 acatctgaggatctggatgacatgaatattgagatcatgaggaacacactctacaaagcg 478 ||||| |||||||| ||||||||||| || ||||| |||||||| || ||||||||||| Sbjct: 590 acatcagaggatctcgatgacatgaacatagagattatgaggaataccctctacaaagca 649 Query: 479 tatcttcaggatttttacaaattttgtgcgaaactaggtgg 519 || ||| ||||||||||||| || ||| |||||| ||||| Sbjct: 650 taccttgaggatttttacaacttctgtcagaaacttggtgg 690 Score = 75.8 bits (38), Expect = 2e-10 Identities = 129/158 (81%), Gaps = 1/158 (0%) Strand = Plus / Plus Query: 6 gccgattacaacaacctctgcc-gtgcgagaccctcgacgacatcaagatgcacctctcc 64 |||||||||||||| || || | ||| |||| ||| ||||| ||||||||||| ||||| Sbjct: 176 gccgattacaacaatctatgtcagtgtgagaacctagacgatatcaagatgcatctctct 235 Query: 65 gccaccgagtacggtccatacctccagaacgaaccttctcccttgcacacaacaacaatc 124 |||||| | |||||||| |||||||| |||||||| || || |||| || || ||||| Sbjct: 236 gccaccaaatacggtccttacctccaaaacgaaccatcacctctgcataccactacaatt 295 Query: 125 gtcgagaagtgcactcttaagttggttgatgaatacaa 162 || |||||||| || || ||| | |||||||| ||||| Sbjct: 296 gtggagaagtgtacgctcaagcttgttgatgactacaa 333
>gb|AF428348.1|AF428348 Arabidopsis thaliana AT3g28715/MZN14_21 mRNA, complete cds Length = 1382 Score = 81.8 bits (41), Expect = 2e-12 Identities = 86/101 (85%) Strand = Plus / Plus Query: 419 acatctgaggatctggatgacatgaatattgagatcatgaggaacacactctacaaagcg 478 ||||| |||||||| ||||||||||| || ||||| |||||||| || ||||||||||| Sbjct: 628 acatcagaggatctcgatgacatgaacatagagattatgaggaataccctctacaaagca 687 Query: 479 tatcttcaggatttttacaaattttgtgcgaaactaggtgg 519 || ||| ||||||||||||| || ||| |||||| ||||| Sbjct: 688 taccttgaggatttttacaacttctgtcagaaacttggtgg 728 Score = 75.8 bits (38), Expect = 2e-10 Identities = 129/158 (81%), Gaps = 1/158 (0%) Strand = Plus / Plus Query: 6 gccgattacaacaacctctgcc-gtgcgagaccctcgacgacatcaagatgcacctctcc 64 |||||||||||||| || || | ||| |||| ||| ||||| ||||||||||| ||||| Sbjct: 214 gccgattacaacaatctatgtcagtgtgagaacctagacgatatcaagatgcatctctct 273 Query: 65 gccaccgagtacggtccatacctccagaacgaaccttctcccttgcacacaacaacaatc 124 |||||| | |||||||| |||||||| |||||||| || || |||| || || ||||| Sbjct: 274 gccaccaaatacggtccttacctccaaaacgaaccatcacctctgcataccactacaatt 333 Query: 125 gtcgagaagtgcactcttaagttggttgatgaatacaa 162 || |||||||| || || ||| | |||||||| ||||| Sbjct: 334 gtggagaagtgtacgctcaagcttgttgatgactacaa 371
>dbj|AP000420.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MZN14 Length = 82890 Score = 81.8 bits (41), Expect = 2e-12 Identities = 65/73 (89%) Strand = Plus / Minus Query: 426 aggatctggatgacatgaatattgagatcatgaggaacacactctacaaagcgtatcttc 485 ||||||| ||||||||||| || ||||| ||||||||||| ||||||||||| || ||| Sbjct: 76833 aggatctcgatgacatgaacatagagattatgaggaacaccctctacaaagcataccttg 76774 Query: 486 aggatttttacaa 498 ||||||||||||| Sbjct: 76773 aggatttttacaa 76761 Score = 73.8 bits (37), Expect = 6e-10 Identities = 64/73 (87%) Strand = Plus / Plus Query: 426 aggatctggatgacatgaatattgagatcatgaggaacacactctacaaagcgtatcttc 485 ||||||| ||||||||||| || ||||| |||||||| || ||||||||||| || ||| Sbjct: 81827 aggatctcgatgacatgaacatagagattatgaggaataccctctacaaagcataccttg 81886 Query: 486 aggatttttacaa 498 ||||||||||||| Sbjct: 81887 aggatttttacaa 81899 Score = 61.9 bits (31), Expect = 2e-06 Identities = 77/91 (84%), Gaps = 1/91 (1%) Strand = Plus / Plus Query: 6 gccgattacaacaacctctgcc-gtgcgagaccctcgacgacatcaagatgcacctctcc 64 |||||||||||||| || || | ||| |||| ||| ||||| ||||||||||| ||||| Sbjct: 80682 gccgattacaacaatctatgtcagtgtgagaacctagacgatatcaagatgcatctctct 80741 Query: 65 gccaccgagtacggtccatacctccagaacg 95 |||||| | |||||||| |||||||| |||| Sbjct: 80742 gccaccaaatacggtccttacctccaaaacg 80772 Score = 44.1 bits (22), Expect = 0.54 Identities = 52/62 (83%) Strand = Plus / Minus Query: 218 tatggacacatgatcgataatgttgtccttattgttactgggacattgcatgaaagagat 277 ||||| |||||||| || ||||| || || ||||||||||| || ||||||| |||||| Sbjct: 77248 tatggccacatgattgacaatgtcgtgctcattgttactggaaccctgcatgagagagat 77189 Query: 278 gt 279 || Sbjct: 77188 gt 77187
>ref|XM_796713.1| PREDICTED: Strongylocentrotus purpuratus similar to Vacuolar ATP synthase subunit d 1 (V-ATPase d subunit 1) (Vacuolar proton pump d subunit 1) (V-ATPase 39 KDa subunit 1), transcript variant 2 (LOC574666), mRNA Length = 1085 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Plus Query: 426 aggatctggatgacatgaatattgagatcat 456 ||||||||||||| |||||||| |||||||| Sbjct: 547 aggatctggatgagatgaatatagagatcat 577
>ref|XM_774842.1| PREDICTED: Strongylocentrotus purpuratus similar to Vacuolar ATP synthase subunit d 1 (V-ATPase d subunit 1) (Vacuolar proton pump d subunit 1) (V-ATPase 39 KDa subunit 1), transcript variant 1 (LOC574666), mRNA Length = 1082 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Plus Query: 426 aggatctggatgacatgaatattgagatcat 456 ||||||||||||| |||||||| |||||||| Sbjct: 547 aggatctggatgagatgaatatagagatcat 577
>gb|DQ443281.1| Bombyx mori H+ transporting ATPase V0 subunit D mRNA, complete cds Length = 2009 Score = 44.1 bits (22), Expect = 0.54 Identities = 43/50 (86%) Strand = Plus / Plus Query: 432 tggatgacatgaatattgagatcatgaggaacacactctacaaagcgtat 481 ||||||| |||||||||||||| || ||||||| || ||||| |||||| Sbjct: 618 tggatgaaatgaatattgagattatccggaacactctatacaaggcgtat 667
>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome Length = 3696649 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 32 gagaccctcgacgacatcaaga 53 |||||||||||||||||||||| Sbjct: 3335141 gagaccctcgacgacatcaaga 3335120
>gb|AC122014.3| Mus musculus chromosome 1 clone RP24-358F15, complete sequence Length = 168526 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 421 atctgaggatctggatgacat 441 ||||||||||||||||||||| Sbjct: 2721 atctgaggatctggatgacat 2741
>gb|AC166108.4| Mus musculus BAC clone RP23-192E10 from chromosome 1, complete sequence Length = 188836 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 421 atctgaggatctggatgacat 441 ||||||||||||||||||||| Sbjct: 158144 atctgaggatctggatgacat 158164
>gb|AC101802.9| Mus musculus chromosome 1, clone RP24-221A4, complete sequence Length = 166975 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 234 ataatgttgtccttattgtta 254 ||||||||||||||||||||| Sbjct: 120969 ataatgttgtccttattgtta 120949
>gb|AC092212.32| Trypanosoma brucei chromosome 8 clone RPCI93-10J17, complete sequence Length = 168741 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 329 gcatcgcttgcagttgctcaaaata 353 |||||||||||||||||| |||||| Sbjct: 153005 gcatcgcttgcagttgcttaaaata 153029
>gb|CP000071.1| Trypanosoma brucei chromosome 8, complete sequence Length = 2481190 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 329 gcatcgcttgcagttgctcaaaata 353 |||||||||||||||||| |||||| Sbjct: 1075819 gcatcgcttgcagttgcttaaaata 1075795
>ref|XM_458705.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0D06248g) partial mRNA Length = 2043 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 480 atcttcaggatttttacaaat 500 ||||||||||||||||||||| Sbjct: 684 atcttcaggatttttacaaat 664
>ref|XM_451745.1| Kluyveromyces lactis NRRL Y-1140, KLLA0B04752g predicted mRNA Length = 1044 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 553 atttgaagctgacagaagagc 573 ||||||||||||||||||||| Sbjct: 639 atttgaagctgacagaagagc 659
>ref|XM_820123.1| Trypanosoma brucei TREU927 clone RPCI93-10J17 hypothetical protein (Tb927.8.3570) partial mRNA Length = 711 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 329 gcatcgcttgcagttgctcaaaata 353 |||||||||||||||||| |||||| Sbjct: 69 gcatcgcttgcagttgcttaaaata 93
>emb|AL354722.10| Human DNA sequence from clone RP11-744O14 on chromosome 9 Contains part of a variant of the PTPRD gene for protein tyrosine phosphatase, receptor type, D (HPTP, PTPD, HPTPD), complete sequence Length = 126045 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 442 gaatattgagatcatgaggaacacactct 470 ||||||||||||||| ||||||| ||||| Sbjct: 23731 gaatattgagatcatcaggaacaaactct 23759
>emb|CR382136.1| Debaryomyces hansenii chromosome D of strain CBS767 of Debaryomyces hansenii Length = 1602771 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 480 atcttcaggatttttacaaat 500 ||||||||||||||||||||| Sbjct: 447913 atcttcaggatttttacaaat 447933
>emb|CR382122.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome B of strain NRRL Y-1140 of Kluyveromyces lactis Length = 1320834 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 553 atttgaagctgacagaagagc 573 ||||||||||||||||||||| Sbjct: 432848 atttgaagctgacagaagagc 432868
>emb|BX649514.8| Zebrafish DNA sequence from clone CH211-232P6 in linkage group 4, complete sequence Length = 152488 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 141 ttaagttggttgatgaataca 161 ||||||||||||||||||||| Sbjct: 3391 ttaagttggttgatgaataca 3371
>emb|BX901962.8| Zebrafish DNA sequence from clone DKEY-153K10 in linkage group 4, complete sequence Length = 182550 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 141 ttaagttggttgatgaataca 161 ||||||||||||||||||||| Sbjct: 98584 ttaagttggttgatgaataca 98564
>gb|U53150.1| Caenorhabditis elegans cosmid F20A1, complete sequence Length = 37717 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 531 acattatgtgtaatctcctt 550 |||||||||||||||||||| Sbjct: 32349 acattatgtgtaatctcctt 32368
>ref|NM_001017310.2| Xenopus tropicalis hypothetical protein LOC550064 (LOC550064), mRNA Length = 1878 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 554 tttgaagctgacagaagagc 573 |||||||||||||||||||| Sbjct: 664 tttgaagctgacagaagagc 683
>ref|XM_426198.1| PREDICTED: Gallus gallus similar to dJ22I17.2 (novel protein with EGF-like and laminin G domains) (LOC428640), mRNA Length = 3567 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 432 tggatgacatgaatattgag 451 |||||||||||||||||||| Sbjct: 1679 tggatgacatgaatattgag 1660
>gb|BC042233.1| Xenopus laevis ATPase, H+ transporting, lysosomal 38kDa, V0 subunit D isoform 1, mRNA (cDNA clone MGC:53957 IMAGE:5570615), complete cds Length = 2367 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 554 tttgaagctgacagaagagc 573 |||||||||||||||||||| Sbjct: 667 tttgaagctgacagaagagc 686
>emb|CR723774.2|CNS0GLES Tetraodon nigroviridis full-length cDNA Length = 1881 Score = 40.1 bits (20), Expect = 8.4 Identities = 44/52 (84%) Strand = Plus / Plus Query: 432 tggatgacatgaatattgagatcatgaggaacacactctacaaagcgtatct 483 ||||||| ||||| ||||||||||| | |||||||| ||||| || ||||| Sbjct: 576 tggatgagatgaacattgagatcattcgaaacacactttacaaggcttatct 627
>gb|AC113309.7| Mus musculus chromosome 6, clone RP23-440D19, complete sequence Length = 229553 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 554 tttgaagctgacagaagagc 573 |||||||||||||||||||| Sbjct: 170896 tttgaagctgacagaagagc 170877
>emb|CR682897.1|CNS0FPVH Tetraodon nigroviridis full-length cDNA Length = 1890 Score = 40.1 bits (20), Expect = 8.4 Identities = 44/52 (84%) Strand = Plus / Plus Query: 432 tggatgacatgaatattgagatcatgaggaacacactctacaaagcgtatct 483 ||||||| ||||| ||||||||||| | |||||||| ||||| || ||||| Sbjct: 577 tggatgagatgaacattgagatcattcgaaacacactttacaaggcttatct 628
>emb|CR633825.2|CNS0EO13 Tetraodon nigroviridis full-length cDNA Length = 1886 Score = 40.1 bits (20), Expect = 8.4 Identities = 44/52 (84%) Strand = Plus / Plus Query: 432 tggatgacatgaatattgagatcatgaggaacacactctacaaagcgtatct 483 ||||||| ||||| ||||||||||| | |||||||| ||||| || ||||| Sbjct: 581 tggatgagatgaacattgagatcattcgaaacacactttacaaggcttatct 632
>gb|AC137994.19| Medicago truncatula clone mth2-23f15, complete sequence Length = 131563 Score = 40.1 bits (20), Expect = 8.4 Identities = 35/40 (87%) Strand = Plus / Minus Query: 426 aggatctggatgacatgaatattgagatcatgaggaacac 465 ||||| ||||||||||||| || || || ||||||||||| Sbjct: 114375 aggatttggatgacatgaacatcgaaataatgaggaacac 114336
>emb|BX957220.1| Methanococcus maripaludis S2 complete genome; segment 2/5 Length = 349648 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 149 gttgatgaatacaaacacat 168 |||||||||||||||||||| Sbjct: 216652 gttgatgaatacaaacacat 216633
>gb|CP000142.2| Pelobacter carbinolicus DSM 2380, complete genome Length = 3665893 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 46 catcaagatgcacctctccg 65 |||||||||||||||||||| Sbjct: 2369855 catcaagatgcacctctccg 2369874
>emb|AL109846.1|SPBC17G9 S.pombe chromosome II cosmid c17G9 Length = 32618 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 479 tatcttcaggatttttacaa 498 |||||||||||||||||||| Sbjct: 8295 tatcttcaggatttttacaa 8314
>emb|BX248402.13| Zebrafish DNA sequence from clone CH211-226P14 in linkage group 14, complete sequence Length = 137130 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 475 agcgtatcttcaggattttt 494 |||||||||||||||||||| Sbjct: 84465 agcgtatcttcaggattttt 84446
>gb|AC027449.6| Homo sapiens chromosome 18, clone RP11-535A5, complete sequence Length = 149660 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 ttgttactgggacattgcat 268 |||||||||||||||||||| Sbjct: 20275 ttgttactgggacattgcat 20294
>gb|AC008894.9| Homo sapiens chromosome 19 clone CTD-2231E14, complete sequence Length = 112067 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 139 tcttaagttggttgatgaatacaa 162 ||||||||||| |||||||||||| Sbjct: 6729 tcttaagttgggtgatgaatacaa 6706
>gb|AC118480.3| Homo sapiens BAC clone RP11-393K13 from 4, complete sequence Length = 108490 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 148 ggttgatgaatacaaacaca 167 |||||||||||||||||||| Sbjct: 81430 ggttgatgaatacaaacaca 81411
>gb|AC112178.2| Homo sapiens chromosome 5 clone RP11-114H21, complete sequence Length = 159853 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 579 acattacaataaacagtatt 598 |||||||||||||||||||| Sbjct: 141003 acattacaataaacagtatt 141022
>gb|AC110721.1| Homo sapiens chromosome 5 clone RP11-520E18, complete sequence Length = 164525 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 579 acattacaataaacagtatt 598 |||||||||||||||||||| Sbjct: 156412 acattacaataaacagtatt 156393
>ref|NM_001021800.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPBC17G9.04c), partial mRNA Length = 2028 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 479 tatcttcaggatttttacaa 498 |||||||||||||||||||| Sbjct: 1042 tatcttcaggatttttacaa 1023
>emb|BX004990.12| Zebrafish DNA sequence from clone DKEY-12H12, complete sequence Length = 201461 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 475 agcgtatcttcaggattttt 494 |||||||||||||||||||| Sbjct: 131547 agcgtatcttcaggattttt 131566
>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome Length = 3147090 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 30 gcgagaccctcgacgacatc 49 |||||||||||||||||||| Sbjct: 1339613 gcgagaccctcgacgacatc 1339632
>emb|CR855501.2| Xenopus tropicalis finished cDNA, clone TEgg130b20 Length = 1878 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 554 tttgaagctgacagaagagc 573 |||||||||||||||||||| Sbjct: 664 tttgaagctgacagaagagc 683
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome Length = 6181863 Score = 40.1 bits (20), Expect = 8.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 553 atttgaagctgacagaagagctgtaaacatta 584 ||||||||| |||||||||||| |||||||| Sbjct: 4176118 atttgaagcacacagaagagctgcaaacatta 4176149
>emb|AL772203.14| Mouse DNA sequence from clone RP23-398I1 on chromosome 4, complete sequence Length = 157996 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 439 catgaatattgagatcatga 458 |||||||||||||||||||| Sbjct: 142569 catgaatattgagatcatga 142588
>emb|AL935327.12| Mouse DNA sequence from clone RP23-259I23 on chromosome 2, complete sequence Length = 127391 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 422 tctgaggatctggatgacat 441 |||||||||||||||||||| Sbjct: 107915 tctgaggatctggatgacat 107934
>gb|AE008692.1| Zymomonas mobilis subsp. mobilis ZM4, complete genome Length = 2056416 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 266 catgaaagagatgtcaatgaactg 289 |||||||||| ||||||||||||| Sbjct: 1521452 catgaaagagttgtcaatgaactg 1521475
>dbj|AB083132.1| Corynebacterium efficiens lysA gene for diaminopimelate decarboxylase, complete cds Length = 1704 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 30 gcgagaccctcgacgacatc 49 |||||||||||||||||||| Sbjct: 1609 gcgagaccctcgacgacatc 1628 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,222,555 Number of Sequences: 3902068 Number of extensions: 5222555 Number of successful extensions: 98633 Number of sequences better than 10.0: 67 Number of HSP's better than 10.0 without gapping: 67 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 98331 Number of HSP's gapped (non-prelim): 268 length of query: 614 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 591 effective length of database: 17,143,297,704 effective search space: 10131688943064 effective search space used: 10131688943064 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
