>PMP22_ARATH (Q9ZS51) Peroxisomal membrane protein PMP22 (22 kDa peroxisomal|
           membrane protein)
          Length = 190

 Score =  144 bits (364), Expect = 4e-35
 Identities = 70/110 (63%), Positives = 87/110 (79%)
 Frame = +3

Query: 66  RQYLLQLQRHPLRTKMITAGFLAGISDSXAQKLSGYQKIEKRRLLLKMIFGFAYGGPFGH 245
           ++YL QLQ+HPLRTK ITAG L+G+SD  +QKLSG QKI+ RR+LLK+IF   + GP GH
Sbjct: 12  QRYLSQLQQHPLRTKAITAGVLSGVSDVVSQKLSGIQKIQLRRVLLKVIFAGGFLGPAGH 71

Query: 246 FLHKMLDYIFKGKKDTKTVAXKVLLEQITSSPWNNLLFLFYYGYVVEKRP 395
           F H  LD  FKGKKDT+TVA KV+LEQ+T SP N+LLF+ YYG V+E+ P
Sbjct: 72  FFHTYLDKFFKGKKDTQTVAKKVILEQLTLSPLNHLLFMIYYGVVIERTP 121

>MPV17_BRARE (Q5TZ51) Protein Mpv17|
          Length = 177

 Score = 50.1 bits (118), Expect = 1e-06
 Identities = 34/101 (33%), Positives = 53/101 (52%), Gaps = 4/101 (3%)
 Frame = +3

Query: 51  LAGPGRQYLLQLQRHPLRTKMITAGFLAGISDSXAQKL---SGYQKIEKRRLLLKMIFGF 221
           +AG  R Y   + +HP + ++ITAG L G+ D  +Q+L    G      RR    M  GF
Sbjct: 1   MAGLWRSYQALMAKHPWKVQIITAGSLVGVGDVISQQLIERRGLANHNARRTAKMMSIGF 60

Query: 222 AYGGPFGHFLHKMLDYIFKGKKDTKTVA-XKVLLEQITSSP 341
            + GP     +K+LD +  G   TK+ A  K+L++Q+  +P
Sbjct: 61  FFVGPVVGGWYKVLDKLVTG--GTKSAALKKMLVDQVGFAP 99

>PXMP2_MOUSE (P42925) Peroxisomal membrane protein 2 (22 kDa peroxisomal|
           membrane protein)
          Length = 193

 Score = 50.1 bits (118), Expect = 1e-06
 Identities = 30/104 (28%), Positives = 57/104 (54%), Gaps = 5/104 (4%)
 Frame = +3

Query: 69  QYLLQLQRHPLRTKMITAGFLAGISDSXAQKLSGYQKIEKRRL-----LLKMIFGFAYGG 233
           QYLL L+ +P+ TK +++G L+ + +  AQ +   Q+ + R L     L  +++G    G
Sbjct: 23  QYLLLLKLYPVLTKAVSSGILSALGNLLAQTIEKKQRKDSRLLEVSGLLRYLVYGLFVTG 82

Query: 234 PFGHFLHKMLDYIFKGKKDTKTVAXKVLLEQITSSPWNNLLFLF 365
           P  H+L+  ++Y    +    +V  ++LL+++  +P   LLF F
Sbjct: 83  PLSHYLYLFMEYSVPPEVPWASV-KRLLLDRLFFAPTFLLLFFF 125

>PXMP2_RAT (Q07066) Peroxisomal membrane protein 2 (22 kDa peroxisomal|
           membrane protein)
          Length = 193

 Score = 49.3 bits (116), Expect = 2e-06
 Identities = 31/104 (29%), Positives = 56/104 (53%), Gaps = 5/104 (4%)
 Frame = +3

Query: 69  QYLLQLQRHPLRTKMITAGFLAGISDSXAQKLSGYQKIEKRRL-----LLKMIFGFAYGG 233
           QYLL L+ +P+ TK +++G L+ + +  AQ +   QK + R L     L  +++G    G
Sbjct: 23  QYLLFLKFYPVVTKAVSSGILSALGNLLAQMIEKKQKKDSRSLEVSGLLRYLVYGLFVTG 82

Query: 234 PFGHFLHKMLDYIFKGKKDTKTVAXKVLLEQITSSPWNNLLFLF 365
           P  H+L+  ++Y    +     V  ++LL+++  +P   LLF F
Sbjct: 83  PLSHYLYLFMEYWVPPEVPWARV-KRLLLDRLFFAPTFLLLFFF 125

>MPV17_XENLA (Q66GV0) Protein Mpv17|
          Length = 177

 Score = 48.1 bits (113), Expect = 5e-06
 Identities = 35/101 (34%), Positives = 52/101 (51%), Gaps = 4/101 (3%)
 Frame = +3

Query: 51  LAGPGRQYLLQLQRHPLRTKMITAGFLAGISDSXAQKL---SGYQKIEKRRLLLKMIFGF 221
           +AG  R Y   L  HP + +++TAG L G+ D  +Q+L    G +     R +  M  GF
Sbjct: 1   MAGLWRAYQRLLGAHPWKVQIVTAGSLVGVGDVISQQLLERKGLKGHSIERTVKMMGIGF 60

Query: 222 AYGGPFGHFLHKMLDYIFKGKKDTKTVA-XKVLLEQITSSP 341
            + GP     +K+LD I  G    K VA  K+LL+Q+  +P
Sbjct: 61  CFVGPVVGGWYKILDRIIPG--SGKPVALKKMLLDQVAFAP 99

>PXMP2_HUMAN (Q9NR77) Peroxisomal membrane protein 2 (22 kDa peroxisomal|
           membrane protein)
          Length = 194

 Score = 44.7 bits (104), Expect = 5e-05
 Identities = 29/113 (25%), Positives = 56/113 (49%), Gaps = 6/113 (5%)
 Frame = +3

Query: 69  QYLLQLQRHPLRTKMITAGFLAGISDSXAQKLSGYQKIEKRRL------LLKMIFGFAYG 230
           QYLL L+ +P+ TK  T+G L+ + +  AQ +   +K E  R       L   ++GF + 
Sbjct: 23  QYLLFLRLYPVLTKAATSGILSALGNFLAQMIEKKRKKENSRSLDVGGPLRYAVYGFFFT 82

Query: 231 GPFGHFLHKMLDYIFKGKKDTKTVAXKVLLEQITSSPWNNLLFLFYYGYVVEK 389
           GP  HF +  +++    +     +  ++LL+++  +P   +LF     ++  K
Sbjct: 83  GPLSHFFYFFMEHWIPPEVPLAGL-RRLLLDRLVFAPAFLMLFFLIMNFLEGK 134

>MPV17_MOUSE (P19258) Protein Mpv17 (Mpv-17)|
          Length = 176

 Score = 43.9 bits (102), Expect = 9e-05
 Identities = 29/88 (32%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
 Frame = +3

Query: 66  RQYLLQLQRHPLRTKMITAGFLAGISDSXAQKL---SGYQKIEKRRLLLKMIFGFAYGGP 236
           R Y   L  HP + +++TAG L G+ D  +Q+L    G Q+ +  R L  +  G  + GP
Sbjct: 5   RAYQRALAAHPWKVQVLTAGSLMGVGDMISQQLVERRGLQQHQAGRTLTMVSLGCGFVGP 64

Query: 237 FGHFLHKMLDYIFKGKKDTKTVAXKVLL 320
                +K+LD++  G   TK  A K +L
Sbjct: 65  VVGGWYKVLDHLIPG--TTKVHALKKML 90

>MPV17_HUMAN (P39210) Protein Mpv17|
          Length = 176

 Score = 42.0 bits (97), Expect = 4e-04
 Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
 Frame = +3

Query: 66  RQYLLQLQRHPLRTKMITAGFLAGISDSXAQKL---SGYQKIEKRRLLLKMIFGFAYGGP 236
           R Y   L  HP + +++TAG L G+ D  +Q+L    G Q+ ++ R L  +  G  + GP
Sbjct: 5   RAYQRALAAHPWKVQVLTAGSLMGLGDIISQQLVERRGLQEHQRGRTLTMVSLGCGFVGP 64

Query: 237 FGHFLHKMLDYIFKGKKDTKTVAXKVLL 320
                +K+LD    G   TK  A K +L
Sbjct: 65  VVGGWYKVLDRFIPG--TTKVDALKKML 90

>MPV17_RAT (Q5BK62) Protein Mpv17|
          Length = 176

 Score = 41.6 bits (96), Expect = 5e-04
 Identities = 27/90 (30%), Positives = 45/90 (50%), Gaps = 3/90 (3%)
 Frame = +3

Query: 66  RQYLLQLQRHPLRTKMITAGFLAGISDSXAQKL---SGYQKIEKRRLLLKMIFGFAYGGP 236
           R Y   L  HP + +++TAG L G+ D  +Q+L    G Q+ +  R L     G  + GP
Sbjct: 5   RAYQRALAAHPWKVQVLTAGSLMGLGDIISQQLVERRGLQQHQTGRTLTMASLGCGFVGP 64

Query: 237 FGHFLHKMLDYIFKGKKDTKTVAXKVLLEQ 326
                +++LD++  G      +  K+LL+Q
Sbjct: 65  VVGGWYRVLDHLIPGTTKVNAL-KKMLLDQ 93

>MPV17_BOVIN (Q2KIN6) Protein Mpv17|
          Length = 176

 Score = 38.9 bits (89), Expect = 0.003
 Identities = 28/88 (31%), Positives = 42/88 (47%), Gaps = 3/88 (3%)
 Frame = +3

Query: 66  RQYLLQLQRHPLRTKMITAGFLAGISDSXAQKL---SGYQKIEKRRLLLKMIFGFAYGGP 236
           R Y   L  HP + +++TAG L G+ D  +Q+L    G Q  +  R L     G  + GP
Sbjct: 5   RAYQRALTAHPWKVQVLTAGSLMGLGDVISQQLVERRGLQAHQAGRTLTMASLGCGFVGP 64

Query: 237 FGHFLHKMLDYIFKGKKDTKTVAXKVLL 320
                +++LD +  G   TK  A K +L
Sbjct: 65  VVGGWYRVLDRLIPG--TTKVDALKKML 90

>SYM1_ASHGO (Q754F0) Protein SYM1|
          Length = 182

 Score = 33.5 bits (75), Expect = 0.13
 Identities = 15/29 (51%), Positives = 17/29 (58%)
 Frame = +3

Query: 72  YLLQLQRHPLRTKMITAGFLAGISDSXAQ 158
           Y   LQ HP RT  +T GFL G+ D  AQ
Sbjct: 8   YKASLQSHPKRTNALTTGFLFGLGDIVAQ 36

>SYM1_CANAL (Q59Q43) Protein SYM1|
          Length = 195

 Score = 30.8 bits (68), Expect = 0.81
 Identities = 29/124 (23%), Positives = 51/124 (41%), Gaps = 16/124 (12%)
 Frame = +3

Query: 69  QYLLQLQRHPLRTKMITAGFLAGISDSXAQ--------KLSGYQKIEKRRLLLKMIFGFA 224
           +Y   L R PL T MIT G L G  D+ AQ             Q  +  R L  +I+G  
Sbjct: 7   RYNALLLRRPLITNMITTGLLVGGGDALAQFFFPNNDNNNLEQQPFDYLRNLRAIIYGSL 66

Query: 225 YGGPFGHFLHKMLDYIFKGKKDTK--------TVAXKVLLEQITSSPWNNLLFLFYYGYV 380
              P G   +K L+      ++ +        +   +V+++Q+  +P+  +   +    +
Sbjct: 67  IFAPIGDKWYKFLNTKVVWTRNAQKPQYQRSMSTLLRVMVDQLVFAPFIGIPLYYSSMTI 126

Query: 381 VEKR 392
           +E R
Sbjct: 127 LENR 130

>VP33_NPVAC (P41480) 33 kDa early protein homolog (p33)|
          Length = 259

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 14/43 (32%), Positives = 23/43 (53%)
 Frame = -3

Query: 326 LLQQHLXSYSFGILLPFKDIIQHFMQEMPKWATICKPKYHLEQ 198
           L  Q    Y F  L+ +KDI ++ +Q++ +WA    P   L+Q
Sbjct: 38  LSSQATYLYHFACLMKYKDIQKYEVQQLIEWAINASPDMDLQQ 80

>VP33_NPVOP (Q06372) 33 kDa early protein (p33)|
          Length = 282

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 11/35 (31%), Positives = 21/35 (60%)
 Frame = -3

Query: 302 YSFGILLPFKDIIQHFMQEMPKWATICKPKYHLEQ 198
           Y F  L+ +KD+ ++ +Q++ +WA    P   L+Q
Sbjct: 46  YHFACLIKYKDVQKYEVQQLIEWAASAPPDIDLQQ 80

>YCF1A_MARPO (P12221) Hypothetical 127 kDa protein ycf1 (ORF 1068)|
          Length = 1068

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 13/32 (40%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
 Frame = -3

Query: 326 LLQQHLXSYSF-GILLPFKDIIQHFMQEMPKW 234
           L+Q HL  Y    IL+ FK++I+ F+ ++P+W
Sbjct: 737 LIQSHLRKYILLPILIIFKNVIRLFLFQIPEW 768

>Y338_MYCPN (P75440) Hypothetical protein MG242 homolog (F10_orf632o)|
          Length = 632

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 29/120 (24%), Positives = 51/120 (42%), Gaps = 13/120 (10%)
 Frame = +3

Query: 72  YLLQLQRHPLRTKMITAGFLAGISDSXAQKLSGYQKIEKRRLLL-----KMIFGFAY-GG 233
           YL+++ +H    K + A  ++   D  AQ LSG   ++     L     + +F   Y   
Sbjct: 126 YLIEINKHSYLRKYVNAIRISFFLDLRAQILSGSFTLDVINKQLEHQNKEELFQAIYLRS 185

Query: 234 PFGHFLHKML------DYIFKGK-KDTKTVAXKVLLEQITSSPWNNLLFLFYYGYVVEKR 392
              HF+   L       +IF  K ++ KTV    L   +  + WN + F  Y+ +V + +
Sbjct: 186 LIKHFISNQLYPISLNSFIFGDKNRENKTVENDKL--SVLKNNWNQIFFSKYFDFVAKNK 243

>AMYA_PYRHO (O57932) Alpha-amylase (EC 3.2.1.1)|
          Length = 633

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 18/77 (23%), Positives = 35/77 (45%), Gaps = 2/77 (2%)
 Frame = +3

Query: 156 QKLSGYQKIEKRRLLLK--MIFGFAYGGPFGHFLHKMLDYIFKGKKDTKTVAXKVLLEQI 329
           +KL      EK R+ ++  +   F Y  P G+++HK +  + K  ++  T    VL  Q 
Sbjct: 293 KKLKELNLFEKYRIFVRGGIWKNFLYKYPEGNYMHKRMLMLSKLLRNNPTARIFVLRAQC 352

Query: 330 TSSPWNNLLFLFYYGYV 380
             + W+ +    Y  ++
Sbjct: 353 NDAYWHGVFGGIYLPHI 369

>PYRD_ARATH (P32746) Dihydroorotate dehydrogenase, mitochondrial precursor (EC|
           1.3.3.1) (Dihydroorotate oxidase) (DHOdehase)
          Length = 460

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = +3

Query: 171 YQKIEKRRLLLKMIFGFAYGGP 236
           Y+KI     L+++  GFAYGGP
Sbjct: 408 YKKIRAGATLVQLYTGFAYGGP 429

>YR02_CAEEL (Q10015) Hypothetical protein T25E4.2|
          Length = 471

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 11/49 (22%), Positives = 24/49 (48%)
 Frame = +3

Query: 249 LHKMLDYIFKGKKDTKTVAXKVLLEQITSSPWNNLLFLFYYGYVVEKRP 395
           + + +D +  G  D   V+ +  L+++    +   +   YYGY+V + P
Sbjct: 61  IEQSIDMVSNGSADITLVSARQTLDRMKKVDFTTPIGFVYYGYLVREIP 109

>ARLY_METCA (Q609I6) Argininosuccinate lyase (EC 4.3.2.1) (Arginosuccinase)|
           (ASAL)
          Length = 465

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
 Frame = -1

Query: 211 IILSRXRRFSIF*YPESFCAXESLMP-ARNPAVIILVR 101
           +IL    +F     P++FC   S+MP  +NP V  L+R
Sbjct: 259 LILWTSAQFGFIDLPDAFCTGSSIMPQKKNPDVPELIR 296

>MLL2_HUMAN (O14686) Myeloid/lymphoid or mixed-lineage leukemia protein 2|
            (ALL1-related protein)
          Length = 5262

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 10/29 (34%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
 Frame = -1

Query: 127  NPAVIILVRSGWRCSWSRYCLP-GPASQG 44
            +P ++ + + GW+C W   C+  G AS G
Sbjct: 1183 DPPLLTVPKGGWKCKWCVSCMQCGAASPG 1211

>PDR2_NICPL (Q2PCF1) Pleiotropic drug resistance protein 2 (NpPDR2)|
          Length = 1461

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = +3

Query: 195  LLLKMIFGFAYGGPFGHFLHKMLDY 269
            LL+K+     Y GP GH  HK+++Y
Sbjct: 1082 LLMKIGGQVIYAGPLGHRSHKLVEY 1106


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 48,248,195
Number of Sequences: 219361
Number of extensions: 892059
Number of successful extensions: 2056
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 2018
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2052
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 1370455656
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)