>TAU_HUMAN (P10636) Microtubule-associated protein tau (Neurofibrillary tangle|
           protein) (Paired helical filament-tau) (PHF-tau)
          Length = 757

 Score = 30.8 bits (68), Expect = 2.7
 Identities = 17/46 (36%), Positives = 21/46 (45%)
 Frame = +3

Query: 273 EHVDQPYLDERRPGCARVAVPRTILPENLTEPTTGIKFPTLLEENS 410
           E V  P +DE  PG    A P T +PE  T    GI     LE+ +
Sbjct: 72  EDVTAPLVDEGAPGKQAAAQPHTEIPEGTTAEEAGIGDTPSLEDEA 117

>TAU_MOUSE (P10637) Microtubule-associated protein tau (Neurofibrillary tangle|
           protein) (Paired helical filament-tau) (PHF-tau)
          Length = 732

 Score = 30.8 bits (68), Expect = 2.7
 Identities = 15/36 (41%), Positives = 18/36 (50%)
 Frame = +3

Query: 273 EHVDQPYLDERRPGCARVAVPRTILPENLTEPTTGI 380
           E V  P +DER P     A P T +PE +T    GI
Sbjct: 61  EDVTAPLVDERAPDKQAAAQPHTEIPEGITAEEAGI 96

>TAU_MACMU (P57786) Microtubule-associated protein tau (Neurofibrillary tangle|
           protein) (Paired helical filament-tau) (PHF-tau)
          Length = 458

 Score = 30.8 bits (68), Expect = 2.7
 Identities = 17/46 (36%), Positives = 21/46 (45%)
 Frame = +3

Query: 273 EHVDQPYLDERRPGCARVAVPRTILPENLTEPTTGIKFPTLLEENS 410
           E V  P +DER PG    A P   +PE  T    GI     LE+ +
Sbjct: 72  EDVTAPLVDERAPGEQAAAQPHMEIPEGTTAEEAGIGDTPSLEDEA 117

>Y1544_PARUW (Q6MAY1) Hypothetical RNA methyltransferase pc1544 (EC 2.1.1.-)|
          Length = 442

 Score = 30.8 bits (68), Expect = 2.7
 Identities = 27/103 (26%), Positives = 44/103 (42%), Gaps = 5/103 (4%)
 Frame = +3

Query: 177 LAAASVIPPFENISPKMLADSMMLGKDGGQIREHVDQPYLDERRPGCARVAVPRTILPEN 356
           L+  SV+   EN+    L++  +   D GQ+ E + Q   +  +P    V  PR  L   
Sbjct: 324 LSRESVLDARENVKENGLSNVTIKSGDVGQVLEALSQE--NSLKPDVVMVDPPRIGLDAK 381

Query: 357 LTEPTTGIKFPTLLEENSNPTAEV-----LVGMGYRSMRVMKV 470
             +    +K P L+  + NP  +V     L+  GY+   V  V
Sbjct: 382 AIKHILDLKAPKLVYISCNPKTQVMNLGPLIDGGYQLQIVQPV 424

>TAU_PANTR (Q5YCW1) Microtubule-associated protein tau|
          Length = 775

 Score = 30.8 bits (68), Expect = 2.7
 Identities = 17/46 (36%), Positives = 21/46 (45%)
 Frame = +3

Query: 273 EHVDQPYLDERRPGCARVAVPRTILPENLTEPTTGIKFPTLLEENS 410
           E V  P +DE  PG    A P T +PE  T    GI     LE+ +
Sbjct: 72  EDVTAPLVDEGAPGKQAAAQPHTEIPEGTTAEEAGIGDTPSLEDEA 117

>UBR2_MOUSE (Q6WKZ8) Ubiquitin-protein ligase E3 component N-recognin-2 (EC|
            6.-.-.-) (Ubiquitin-protein ligase E3-alpha-2)
            (Ubiquitin-protein ligase E3-alpha-II)
          Length = 1755

 Score = 30.4 bits (67), Expect = 3.5
 Identities = 12/38 (31%), Positives = 20/38 (52%)
 Frame = -3

Query: 148  STSFHTRPSAAFASLAKSICTACSSLTCNPAKCCMQEV 35
            +++F    S    S A ++C  C SL C+ + CC  E+
Sbjct: 1614 ASNFSCPKSGGDKSRAPTLCLVCGSLLCSQSYCCQAEL 1651

>UBR2_HUMAN (Q8IWV8) Ubiquitin-protein ligase E3 component N-recognin-2 (EC|
            6.-.-.-) (Ubiquitin-protein ligase E3-alpha-2)
            (Ubiquitin-protein ligase E3-alpha-II)
          Length = 1755

 Score = 30.4 bits (67), Expect = 3.5
 Identities = 12/38 (31%), Positives = 20/38 (52%)
 Frame = -3

Query: 148  STSFHTRPSAAFASLAKSICTACSSLTCNPAKCCMQEV 35
            +++F    S    S A ++C  C SL C+ + CC  E+
Sbjct: 1614 ASNFSCPKSGGDKSRAPTLCLVCGSLLCSQSYCCQTEL 1651

>TAU_GORGO (Q5YCW0) Microtubule-associated protein tau|
          Length = 775

 Score = 30.4 bits (67), Expect = 3.5
 Identities = 17/46 (36%), Positives = 21/46 (45%)
 Frame = +3

Query: 273 EHVDQPYLDERRPGCARVAVPRTILPENLTEPTTGIKFPTLLEENS 410
           E V  P +DE  PG    A P T +PE  T    GI     LE+ +
Sbjct: 72  EDVTAPLVDEGAPGEQAAAQPHTEIPEGTTAEEAGIGDTPSLEDEA 117

>TAU_SPECI (Q6TS35) Microtubule-associated protein tau|
          Length = 429

 Score = 29.6 bits (65), Expect = 5.9
 Identities = 15/36 (41%), Positives = 17/36 (47%)
 Frame = +3

Query: 273 EHVDQPYLDERRPGCARVAVPRTILPENLTEPTTGI 380
           E V  P +DER PG      P T +PE  T    GI
Sbjct: 59  EDVTAPLVDERTPGEQAATQPPTDIPEGTTAEEAGI 94

>PIP_MOUSE (P02816) Prolactin-inducible protein homolog precursor (14 kDa|
           submandibular gland protein) (SMGP) (Gross cystic
           disease fluid protein 15) (GCDFP-15)
          Length = 146

 Score = 29.3 bits (64), Expect = 7.8
 Identities = 21/75 (28%), Positives = 34/75 (45%), Gaps = 4/75 (5%)
 Frame = +3

Query: 315 CARVAVPRTILPENLTEPTT-GIKFPTLLEENSNPTAEVLVGMGYRSMRVMK---VKNLN 482
           C ++ +  +   EN+ +P    I  P+  +EN   T +V V   YR   V+K   V N  
Sbjct: 18  CLQLGIIESQDDENVRKPLLIEIDVPSTAQENQEITVQVTVETQYRECMVIKAYLVSNEP 77

Query: 483 LYAFGLYIQPDSICN 527
           +     Y+Q   +CN
Sbjct: 78  MEGAFNYVQTRCLCN 92


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 85,279,626
Number of Sequences: 219361
Number of extensions: 1810691
Number of successful extensions: 4990
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4769
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4986
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4488201198
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)