>SRP_DROME (P52172) Box A-binding factor (ABF) (GATA-binding factor-B)|
            (Transcription factor GATA-B) (dGATA-B) (Protein serpent)
          Length = 1264

 Score = 33.9 bits (76), Expect = 0.45
 Identities = 30/90 (33%), Positives = 42/90 (46%)
 Frame = +2

Query: 371  KLQSSDISKDKQVDPALADILKLSFSSSEFSMAFPYVAMSDDEALENSLLSGFTENCEDG 550
            +L SS  S        LA +L  S +++  + A    A    EAL  SL S    NC   
Sbjct: 1061 QLSSSSNSGSTSDHQLLAQLLPNSITAAAAAAAAAAAAAIKTEAL--SLTS--QANCSTA 1116

Query: 551  SGGNHITYTDTCAASSESMKKHLNMDSIQD 640
            S G  +T T T A+S+ S   H N+ S+Q+
Sbjct: 1117 SAGLMVTSTPTTASSTLSSLSHSNIISLQN 1146

>MDR17_ARATH (Q9M1Q9) Multidrug resistance protein 17 (P-glycoprotein 21)|
          Length = 1292

 Score = 30.8 bits (68), Expect = 3.8
 Identities = 19/57 (33%), Positives = 31/57 (54%)
 Frame = -2

Query: 651  DFSKS*MESMFRCFFILSLLAAHVSVYVI*FPPEPSSQFSVNPDSNEFSNASSSDMA 481
            D  K+  +S+FR FF L++ A  +S              S++PDS++ SNA++S  A
Sbjct: 978  DDGKTTFDSVFRVFFALTMAAVAIS-----------QSSSLSPDSSKASNAAASIFA 1023

>SRP40_YEAST (P32583) Suppressor protein SRP40|
          Length = 406

 Score = 30.4 bits (67), Expect = 4.9
 Identities = 30/127 (23%), Positives = 55/127 (43%)
 Frame = +2

Query: 224 EAKEVVHYQTISPKSLADSVLEEGGWSNLVCSKDGPQKNVDVAVIFLGSKLQSSDISKDK 403
           +AKE    +T  P+S + S     G S+   S+ G + + D +     S   SSD   D 
Sbjct: 137 DAKETKKAKT-EPESSSSSESSSSGSSSSSESESGSESDSDSS----SSSSSSSDSESDS 191

Query: 404 QVDPALADILKLSFSSSEFSMAFPYVAMSDDEALENSLLSGFTENCEDGSGGNHITYTDT 583
           + D   +     S SSS+   +    +   D +  +S  S  +++  D S  +  + +  
Sbjct: 192 ESDSQSSSSSSSSDSSSDSDSSSSDSSSDSDSSSSSSSSSSDSDSDSDSSSDSDSSGSSD 251

Query: 584 CAASSES 604
            ++SS+S
Sbjct: 252 SSSSSDS 258

>YOW1_SCHPO (Q9USR9) Hypothetical protein C1861.01c in chromosome II|
          Length = 643

 Score = 30.4 bits (67), Expect = 4.9
 Identities = 18/49 (36%), Positives = 29/49 (59%)
 Frame = -2

Query: 552 EPSSQFSVNPDSNEFSNASSSDMAT*GNAMENSELEKDSFRMSAKAGST 406
           +P+S  +VN  S+E S+ASSSD +     + +S L  +S  + A  GS+
Sbjct: 76  QPTSPMAVNAASDEASHASSSDSSDKNPDIPSSPLLMNSRALRASRGSS 124

>YCF1_EPIVI (Q00383) Hypothetical 208 kDa protein ycf1 (ORF 1738)|
          Length = 1738

 Score = 30.0 bits (66), Expect = 6.5
 Identities = 20/80 (25%), Positives = 37/80 (46%), Gaps = 2/80 (2%)
 Frame = +2

Query: 431 LKLSFSSSEFSMAFPYVAMSDDEALENSLLSGFTEN-CE-DGSGGNHITYTDTCAASSES 604
           + L F  + ++  F Y+  +  E    + +S F  N CE DG      TY  + +   E 
Sbjct: 370 VNLIFDKNRWNRPFRYIKNTHFEGATRNEMSQFFFNICENDGKERISFTYLSSLSFFLEM 429

Query: 605 MKKHLNMDSIQDLLKSRMGN 664
           +KK +N   ++  L +++ N
Sbjct: 430 IKKKINSHKLEKALTNKLSN 449

>CCSA_ODOSI (P49523) Cytochrome c biogenesis protein ccsA|
          Length = 312

 Score = 29.6 bits (65), Expect = 8.4
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = -3

Query: 95  GKRAARIGDLGFALVWLARFGYRFL 21
           GK+ A +G LGF ++W+   G  FL
Sbjct: 277 GKKTAILGGLGFFVIWICYLGVNFL 301

>TFE3_MOUSE (Q64092) Transcription factor E3 (Fragment)|
          Length = 446

 Score = 29.6 bits (65), Expect = 8.4
 Identities = 33/170 (19%), Positives = 70/170 (41%), Gaps = 17/170 (10%)
 Frame = +2

Query: 197 PKNYGLSPNEAKEVVHY--QTISPKSLADSVLEEGGWSNL----------VCSKDGPQKN 340
           P  Y L     ++V  Y   T+ PK  + ++    G S+                G   N
Sbjct: 59  PTRYHLQQARRQQVKQYLSTTLGPKLASQALTPPPGPSSAQPLPAPETAHATGPTGSAPN 118

Query: 341 VDVAVIFLGSKLQSSDISKDKQVDPALADILKLSFSSSEFSMAF-----PYVAMSDDEAL 505
             +A++ +GS       S +K++D  + +I+ L  S ++  +++       + +     +
Sbjct: 119 SPMALLTIGS-------SSEKEIDDVIDEIISLESSYNDEMLSYLPGGTAGLQLPSTLPV 171

Query: 506 ENSLLSGFTENCEDGSGGNHITYTDTCAASSESMKKHLNMDSIQDLLKSR 655
             +LL  ++     G     IT +++C A   ++K+ ++    + LLK R
Sbjct: 172 SGNLLDVYSSQ---GVATPAITVSNSCPAELPNIKREISETEAKALLKER 218


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 83,158,810
Number of Sequences: 219361
Number of extensions: 1443178
Number of successful extensions: 4268
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 4147
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4266
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6370891296
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)