ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags17l24
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_196485.1| Oryza sativa (japonica cultivar-group) hypothet... 353 4e-94
2dbj|AK067754.1| Oryza sativa (japonica cultivar-group) cDNA clon... 353 4e-94
3gb|AY664417.1| Zea mays cultivar Mo17 locus 9002, complete sequence 135 2e-28
4gb|AY664413.1| Zea mays cultivar B73 locus 9002, complete sequence 135 2e-28
5gb|AC027660.2| Oryza sativa (japonica cultivar-group) chromosome... 131 2e-27
6dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 131 2e-27
7gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 131 2e-27
8ref|NM_103586.3| Arabidopsis thaliana methyltransferase AT1G4511... 44 0.45
9gb|BT010558.1| Arabidopsis thaliana At1g45110 gene, complete cds 44 0.45
10emb|BX814552.1|CNS0AC8P Arabidopsis thaliana Full-length cDNA Co... 44 0.45
11gb|AC007915.3|AC007915 Genomic sequence for Arabidopsis thaliana... 44 0.45
12gb|AY692264.1| Bacteriophage T5 strain st0 deletion mutant, comp... 40 7.0
13gb|AY543070.1| Bacteriophage T5, complete genome 40 7.0
14gb|AC185539.1| Drosophila melanogaster clone BACR22O16, complete... 40 7.0
15gb|AC185536.1| Drosophila melanogaster clone BACR38K14, complete... 40 7.0
16gb|AC122923.4| Mus musculus BAC clone RP23-36G5 from 10, complet... 40 7.0
17gb|AC092848.3| Homo sapiens BAC clone RP11-689A23 from 7, comple... 40 7.0
18gb|AC142307.1| Pan troglodytes BAC clone RP43-131H12 from 7, com... 40 7.0
19emb|AL445649.15| Human DNA sequence from clone RP11-381O6 on chr... 40 7.0
20gb|AC158946.4| Mus musculus chromosome 1, clone RP24-267F8, comp... 40 7.0
21ref|NM_167760.1| Drosophila melanogaster CG14476-RE, transcript ... 40 7.0
22ref|NM_167759.1| Drosophila melanogaster CG14476-RD, transcript ... 40 7.0
23ref|NM_167758.1| Drosophila melanogaster CG14476-RC, transcript ... 40 7.0
24ref|NM_167757.1| Drosophila melanogaster CG14476-RA, transcript ... 40 7.0
25ref|NM_143888.4| Drosophila melanogaster CG14476-RB, transcript ... 40 7.0
26gb|CP000249.1| Frankia sp. CcI3, complete genome 40 7.0
27emb|BX004973.10| Mouse DNA sequence from clone RP24-260G16 on ch... 40 7.0
28emb|AL845260.15| Mouse DNA sequence from clone RP23-232J15 on ch... 40 7.0
29gb|AY587007.1| Bacteriophage T5 strain ATCC 11303-B5, complete g... 40 7.0
30gb|AF145625.1|AF145625 Drosophila melanogaster clone GH04962 BcD... 40 7.0
31gb|AE003122.5| Drosophila melanogaster chromosome X, section 72 ... 40 7.0
32emb|AL356032.4|CNS05TDD Human chromosome 14 DNA sequence BAC R-8... 40 7.0
33emb|X75922.1|BT5LLP Bacteriophage T5 llp, oad, dmp genes 40 7.0
34gb|AC132435.3| Mus musculus BAC clone RP23-223L12 from 10, compl... 40 7.0
35emb|AL355887.4|CNS05TCY Human chromosome 14 DNA sequence BAC R-1... 40 7.0
36emb|AL808017.4| Mouse DNA sequence from clone RP23-145G21 on chr... 40 7.0
37emb|AL606536.13| Mouse DNA sequence from clone RP23-93C9 on chro... 40 7.0 
>ref|NM_196485.1| Oryza sativa (japonica cultivar-group) hypothetical protein
           (OSJNBa0045B21.18), mRNA
          Length = 1113

 Score =  353 bits (178), Expect = 4e-94
 Identities = 337/390 (86%)
 Strand = Plus / Plus

                                                                       
Query: 129 gcctcggaaacgactttggaatcagggttgtatctagtggcgacacccattgggaacctc 188
           ||||||||| ||  |||||| || ||| ||||||| ||||| || || || |||||||||
Sbjct: 154 gcctcggaaccggatttggattccgggctgtatcttgtggcaacgccaatcgggaacctc 213

                                                                       
Query: 189 gaggatatcaccttgagggcattgcgtgttctgaaatgtgcttgtgtgatactctctgaa 248
           |||||||||||||| |||||||||||| | || |||||||||  ||| ||||| || |||
Sbjct: 214 gaggatatcaccttaagggcattgcgtatcctcaaatgtgctgatgtcatactatcagaa 273

                                                                       
Query: 249 gacacaaggcattctggaaagttacttcagcattacaacatcaagacacctcttctcagc 308
           ||||||||||||||||||||| ||||||| ||||| ||||||||||||||||||||||||
Sbjct: 274 gacacaaggcattctggaaagctacttcaacattataacatcaagacacctcttctcagc 333

                                                                       
Query: 309 ttccataagttcaatgagcgcgagagagagcccattatcttaaagaggctccatgaaggg 368
           || |||||||| |||||||| || |||||||| | |||||||||||| || |||||||||
Sbjct: 334 tttcataagtttaatgagcgtgaaagagagcctaatatcttaaagagacttcatgaaggg 393

                                                                       
Query: 369 gaagcaattgcagtgattagtgatgctggcactccaggcatcagtgaccctggcatggag 428
           |||||| ||||| |||||||||||||||| ||||| || || ||||| ||||||||||| 
Sbjct: 394 gaagcagttgcattgattagtgatgctggtactcctggaattagtgatcctggcatggaa 453

                                                                       
Query: 429 ctggctagactatgcatgactgaaaaaattcctgttattcccattcctgggccttctgcc 488
           ||||||||||||||    |||||   ||| |||||||| |||||||||||||| ||||| 
Sbjct: 454 ctggctagactatgtgctactgagggaatccctgttatccccattcctgggccgtctgct 513

                                         
Query: 489 gcaattgccgctctttctgcatcgggtttg 518
           ||||| || |||||||||||||| ||||||
Sbjct: 514 gcaatagctgctctttctgcatctggtttg 543
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>dbj|AK067754.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013114M12, full
           insert sequence
          Length = 1599

 Score =  353 bits (178), Expect = 4e-94
 Identities = 337/390 (86%)
 Strand = Plus / Plus

                                                                       
Query: 129 gcctcggaaacgactttggaatcagggttgtatctagtggcgacacccattgggaacctc 188
           ||||||||| ||  |||||| || ||| ||||||| ||||| || || || |||||||||
Sbjct: 217 gcctcggaaccggatttggattccgggctgtatcttgtggcaacgccaatcgggaacctc 276

                                                                       
Query: 189 gaggatatcaccttgagggcattgcgtgttctgaaatgtgcttgtgtgatactctctgaa 248
           |||||||||||||| |||||||||||| | || |||||||||  ||| ||||| || |||
Sbjct: 277 gaggatatcaccttaagggcattgcgtatcctcaaatgtgctgatgtcatactatcagaa 336

                                                                       
Query: 249 gacacaaggcattctggaaagttacttcagcattacaacatcaagacacctcttctcagc 308
           ||||||||||||||||||||| ||||||| ||||| ||||||||||||||||||||||||
Sbjct: 337 gacacaaggcattctggaaagctacttcaacattataacatcaagacacctcttctcagc 396

                                                                       
Query: 309 ttccataagttcaatgagcgcgagagagagcccattatcttaaagaggctccatgaaggg 368
           || |||||||| |||||||| || |||||||| | |||||||||||| || |||||||||
Sbjct: 397 tttcataagtttaatgagcgtgaaagagagcctaatatcttaaagagacttcatgaaggg 456

                                                                       
Query: 369 gaagcaattgcagtgattagtgatgctggcactccaggcatcagtgaccctggcatggag 428
           |||||| ||||| |||||||||||||||| ||||| || || ||||| ||||||||||| 
Sbjct: 457 gaagcagttgcattgattagtgatgctggtactcctggaattagtgatcctggcatggaa 516

                                                                       
Query: 429 ctggctagactatgcatgactgaaaaaattcctgttattcccattcctgggccttctgcc 488
           ||||||||||||||    |||||   ||| |||||||| |||||||||||||| ||||| 
Sbjct: 517 ctggctagactatgtgctactgagggaatccctgttatccccattcctgggccgtctgct 576

                                         
Query: 489 gcaattgccgctctttctgcatcgggtttg 518
           ||||| || |||||||||||||| ||||||
Sbjct: 577 gcaatagctgctctttctgcatctggtttg 606
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>gb|AY664417.1| Zea mays cultivar Mo17 locus 9002, complete sequence
          Length = 366120

 Score =  135 bits (68), Expect = 2e-28
 Identities = 95/104 (91%)
 Strand = Plus / Minus

                                                                          
Query: 199    ccttgagggcattgcgtgttctgaaatgtgcttgtgtgatactctctgaagacacaaggc 258
              |||| |||||| ||||||| || |||||||||  ||||||||| ||||||||||||||||
Sbjct: 225582 ccttcagggcactgcgtgtcctaaaatgtgctaatgtgatactatctgaagacacaaggc 225523

                                                          
Query: 259    attctggaaagttacttcagcattacaacatcaagacacctctt 302
              |||| |||||| ||||||||||||||||||||||||||||||||
Sbjct: 225522 attcaggaaagctacttcagcattacaacatcaagacacctctt 225479



 Score =  133 bits (67), Expect = 6e-28
 Identities = 112/127 (88%)
 Strand = Plus / Minus

                                                                          
Query: 306    agcttccataagttcaatgagcgcgagagagagcccattatcttaaagaggctccatgaa 365
              ||||||||||||||||| || || ||||||||||||| |||||||| |||||| ||||||
Sbjct: 225400 agcttccataagttcaacgaacgggagagagagcccactatcttaaggaggcttcatgaa 225341

                                                                          
Query: 366    ggggaagcaattgcagtgattagtgatgctggcactccaggcatcagtgaccctggcatg 425
              || |||||| ||||| |||| ||||||||||| || ||||| || |||||||||||||||
Sbjct: 225340 ggtgaagcagttgcactgataagtgatgctgggacgccaggtattagtgaccctggcatg 225281

                     
Query: 426    gagctgg 432
              || ||||
Sbjct: 225280 gaactgg 225274



 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 66/72 (91%)
 Strand = Plus / Minus

                                                                          
Query: 447    actgaaaaaattcctgttattcccattcctgggccttctgccgcaattgccgctctttct 506
              ||||| ||||| ||||| ||||||||||||||||| ||||| |||||||| |||||||||
Sbjct: 225065 actgagaaaatccctgtcattcccattcctgggccatctgctgcaattgctgctctttct 225006

                          
Query: 507    gcatcgggtttg 518
              ||||||||||||
Sbjct: 225005 gcatcgggtttg 224994
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>gb|AY664413.1| Zea mays cultivar B73 locus 9002, complete sequence
          Length = 317137

 Score =  135 bits (68), Expect = 2e-28
 Identities = 95/104 (91%)
 Strand = Plus / Minus

                                                                          
Query: 199    ccttgagggcattgcgtgttctgaaatgtgcttgtgtgatactctctgaagacacaaggc 258
              |||| |||||| ||||||| || |||||||||  ||||||||| ||||||||||||||||
Sbjct: 177847 ccttcagggcactgcgtgtcctaaaatgtgctaatgtgatactatctgaagacacaaggc 177788

                                                          
Query: 259    attctggaaagttacttcagcattacaacatcaagacacctctt 302
              |||| |||||| ||||||||||||||||||||||||||||||||
Sbjct: 177787 attcaggaaagctacttcagcattacaacatcaagacacctctt 177744



 Score =  133 bits (67), Expect = 6e-28
 Identities = 112/127 (88%)
 Strand = Plus / Minus

                                                                          
Query: 306    agcttccataagttcaatgagcgcgagagagagcccattatcttaaagaggctccatgaa 365
              ||||||||||||||||| || || ||||||||||||| |||||||| |||||| ||||||
Sbjct: 177665 agcttccataagttcaacgaacgggagagagagcccactatcttaaggaggcttcatgaa 177606

                                                                          
Query: 366    ggggaagcaattgcagtgattagtgatgctggcactccaggcatcagtgaccctggcatg 425
              || |||||| ||||| |||| ||||||||||| || ||||| || |||||||||||||||
Sbjct: 177605 ggtgaagcagttgcactgataagtgatgctgggacgccaggtattagtgaccctggcatg 177546

                     
Query: 426    gagctgg 432
              || ||||
Sbjct: 177545 gaactgg 177539



 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 66/72 (91%)
 Strand = Plus / Minus

                                                                          
Query: 447    actgaaaaaattcctgttattcccattcctgggccttctgccgcaattgccgctctttct 506
              ||||| ||||| ||||| ||||||||||||||||| ||||| |||||||| |||||||||
Sbjct: 177277 actgagaaaatccctgtcattcccattcctgggccatctgctgcaattgctgctctttct 177218

                          
Query: 507    gcatcgggtttg 518
              ||||||||||||
Sbjct: 177217 gcatcgggtttg 177206
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>gb|AC027660.2| Oryza sativa (japonica cultivar-group) chromosome 10 clone BAC
              nbxb0045B21, complete sequence
          Length = 152397

 Score =  131 bits (66), Expect = 2e-27
 Identities = 114/130 (87%)
 Strand = Plus / Minus

                                                                          
Query: 303    ctcagcttccataagttcaatgagcgcgagagagagcccattatcttaaagaggctccat 362
              |||||||| |||||||| |||||||| || |||||||| | |||||||||||| || |||
Sbjct: 130448 ctcagctttcataagtttaatgagcgtgaaagagagcctaatatcttaaagagacttcat 130389

                                                                          
Query: 363    gaaggggaagcaattgcagtgattagtgatgctggcactccaggcatcagtgaccctggc 422
              |||||||||||| ||||| |||||||||||||||| ||||| || || ||||| ||||||
Sbjct: 130388 gaaggggaagcagttgcattgattagtgatgctggtactcctggaattagtgatcctggc 130329

                        
Query: 423    atggagctgg 432
              ||||| ||||
Sbjct: 130328 atggaactgg 130319



 Score =  109 bits (55), Expect = 9e-21
 Identities = 88/99 (88%)
 Strand = Plus / Minus

                                                                          
Query: 204    agggcattgcgtgttctgaaatgtgcttgtgtgatactctctgaagacacaaggcattct 263
              |||||||||||| | || |||||||||  ||| ||||| || ||||||||||||||||||
Sbjct: 130659 agggcattgcgtatcctcaaatgtgctgatgtcatactatcagaagacacaaggcattct 130600

                                                     
Query: 264    ggaaagttacttcagcattacaacatcaagacacctctt 302
              |||||| ||||||| ||||| ||||||||||||||||||
Sbjct: 130599 ggaaagctacttcaacattataacatcaagacacctctt 130561



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 54/60 (90%)
 Strand = Plus / Minus

                                                                          
Query: 459    cctgttattcccattcctgggccttctgccgcaattgccgctctttctgcatcgggtttg 518
              |||||||| |||||||||||||| ||||| ||||| || |||||||||||||| ||||||
Sbjct: 130012 cctgttatccccattcctgggccgtctgctgcaatagctgctctttctgcatctggtttg 129953



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 52/60 (86%)
 Strand = Plus / Minus

                                                                          
Query: 143    tttggaatcagggttgtatctagtggcgacacccattgggaacctcgaggatatcacctt 202
              |||||| || ||| ||||||| ||||| || || || |||||||||||||||||||||||
Sbjct: 131327 tttggattccgggctgtatcttgtggcaacgccaatcgggaacctcgaggatatcacctt 131268
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score =  131 bits (66), Expect = 2e-27
 Identities = 114/130 (87%)
 Strand = Plus / Minus

                                                                            
Query: 303      ctcagcttccataagttcaatgagcgcgagagagagcccattatcttaaagaggctccat 362
                |||||||| |||||||| |||||||| || |||||||| | |||||||||||| || |||
Sbjct: 13961822 ctcagctttcataagtttaatgagcgtgaaagagagcctaatatcttaaagagacttcat 13961763

                                                                            
Query: 363      gaaggggaagcaattgcagtgattagtgatgctggcactccaggcatcagtgaccctggc 422
                |||||||||||| ||||| |||||||||||||||| ||||| || || ||||| ||||||
Sbjct: 13961762 gaaggggaagcagttgcattgattagtgatgctggtactcctggaattagtgatcctggc 13961703

                          
Query: 423      atggagctgg 432
                ||||| ||||
Sbjct: 13961702 atggaactgg 13961693



 Score =  109 bits (55), Expect = 9e-21
 Identities = 88/99 (88%)
 Strand = Plus / Minus

                                                                            
Query: 204      agggcattgcgtgttctgaaatgtgcttgtgtgatactctctgaagacacaaggcattct 263
                |||||||||||| | || |||||||||  ||| ||||| || ||||||||||||||||||
Sbjct: 13962033 agggcattgcgtatcctcaaatgtgctgatgtcatactatcagaagacacaaggcattct 13961974

                                                       
Query: 264      ggaaagttacttcagcattacaacatcaagacacctctt 302
                |||||| ||||||| ||||| ||||||||||||||||||
Sbjct: 13961973 ggaaagctacttcaacattataacatcaagacacctctt 13961935



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 54/60 (90%)
 Strand = Plus / Minus

                                                                            
Query: 459      cctgttattcccattcctgggccttctgccgcaattgccgctctttctgcatcgggtttg 518
                |||||||| |||||||||||||| ||||| ||||| || |||||||||||||| ||||||
Sbjct: 13961386 cctgttatccccattcctgggccgtctgctgcaatagctgctctttctgcatctggtttg 13961327



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 52/60 (86%)
 Strand = Plus / Minus

                                                                            
Query: 143      tttggaatcagggttgtatctagtggcgacacccattgggaacctcgaggatatcacctt 202
                |||||| || ||| ||||||| ||||| || || || |||||||||||||||||||||||
Sbjct: 13962701 tttggattccgggctgtatcttgtggcaacgccaatcgggaacctcgaggatatcacctt 13962642
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score =  131 bits (66), Expect = 2e-27
 Identities = 114/130 (87%)
 Strand = Plus / Minus

                                                                            
Query: 303      ctcagcttccataagttcaatgagcgcgagagagagcccattatcttaaagaggctccat 362
                |||||||| |||||||| |||||||| || |||||||| | |||||||||||| || |||
Sbjct: 13969164 ctcagctttcataagtttaatgagcgtgaaagagagcctaatatcttaaagagacttcat 13969105

                                                                            
Query: 363      gaaggggaagcaattgcagtgattagtgatgctggcactccaggcatcagtgaccctggc 422
                |||||||||||| ||||| |||||||||||||||| ||||| || || ||||| ||||||
Sbjct: 13969104 gaaggggaagcagttgcattgattagtgatgctggtactcctggaattagtgatcctggc 13969045

                          
Query: 423      atggagctgg 432
                ||||| ||||
Sbjct: 13969044 atggaactgg 13969035



 Score =  109 bits (55), Expect = 9e-21
 Identities = 88/99 (88%)
 Strand = Plus / Minus

                                                                            
Query: 204      agggcattgcgtgttctgaaatgtgcttgtgtgatactctctgaagacacaaggcattct 263
                |||||||||||| | || |||||||||  ||| ||||| || ||||||||||||||||||
Sbjct: 13969375 agggcattgcgtatcctcaaatgtgctgatgtcatactatcagaagacacaaggcattct 13969316

                                                       
Query: 264      ggaaagttacttcagcattacaacatcaagacacctctt 302
                |||||| ||||||| ||||| ||||||||||||||||||
Sbjct: 13969315 ggaaagctacttcaacattataacatcaagacacctctt 13969277



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 54/60 (90%)
 Strand = Plus / Minus

                                                                            
Query: 459      cctgttattcccattcctgggccttctgccgcaattgccgctctttctgcatcgggtttg 518
                |||||||| |||||||||||||| ||||| ||||| || |||||||||||||| ||||||
Sbjct: 13968728 cctgttatccccattcctgggccgtctgctgcaatagctgctctttctgcatctggtttg 13968669



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 52/60 (86%)
 Strand = Plus / Minus

                                                                            
Query: 143      tttggaatcagggttgtatctagtggcgacacccattgggaacctcgaggatatcacctt 202
                |||||| || ||| ||||||| ||||| || || || |||||||||||||||||||||||
Sbjct: 13970043 tttggattccgggctgtatcttgtggcaacgccaatcgggaacctcgaggatatcacctt 13969984
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>ref|NM_103586.3| Arabidopsis thaliana methyltransferase AT1G45110 mRNA, complete cds
          Length = 1316

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 46/54 (85%)
 Strand = Plus / Plus

                                                                 
Query: 233 tgtgatactctctgaagacacaaggcattctggaaagttacttcagcattacaa 286
           ||||||||||||||| || ||||| || ||||| ||||| || ||| |||||||
Sbjct: 284 tgtgatactctctgaggatacaagacactctgggaagttgctacagtattacaa 337
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>gb|BT010558.1| Arabidopsis thaliana At1g45110 gene, complete cds
          Length = 1032

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 46/54 (85%)
 Strand = Plus / Plus

                                                                 
Query: 233 tgtgatactctctgaagacacaaggcattctggaaagttacttcagcattacaa 286
           ||||||||||||||| || ||||| || ||||| ||||| || ||| |||||||
Sbjct: 246 tgtgatactctctgaggatacaagacactctgggaagttgctacagtattacaa 299
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>emb|BX814552.1|CNS0AC8P Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB7ZG01 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1283

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 46/54 (85%)
 Strand = Plus / Plus

                                                                 
Query: 233 tgtgatactctctgaagacacaaggcattctggaaagttacttcagcattacaa 286
           ||||||||||||||| || ||||| || ||||| ||||| || ||| |||||||
Sbjct: 251 tgtgatactctctgaggatacaagacactctgggaagttgctacagtattacaa 304
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>gb|AC007915.3|AC007915 Genomic sequence for Arabidopsis thaliana BAC F27F5 from chromosome I,
             complete sequence
          Length = 137336

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 46/54 (85%)
 Strand = Plus / Plus

                                                                   
Query: 233   tgtgatactctctgaagacacaaggcattctggaaagttacttcagcattacaa 286
             ||||||||||||||| || ||||| || ||||| ||||| || ||| |||||||
Sbjct: 78928 tgtgatactctctgaggatacaagacactctgggaagttgctacagtattacaa 78981
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>gb|AY692264.1| Bacteriophage T5 strain st0 deletion mutant, complete genome
          Length = 113238

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 371    agcaattgcagtgattagtg 390
              ||||||||||||||||||||
Sbjct: 102743 agcaattgcagtgattagtg 102724
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>gb|AY543070.1| Bacteriophage T5, complete genome
          Length = 121750

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 371    agcaattgcagtgattagtg 390
              ||||||||||||||||||||
Sbjct: 110785 agcaattgcagtgattagtg 110766
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>gb|AC185539.1| Drosophila melanogaster clone BACR22O16, complete sequence
          Length = 180099

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 472    ttcctgggccttctgccgca 491
              ||||||||||||||||||||
Sbjct: 118150 ttcctgggccttctgccgca 118169
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>gb|AC185536.1| Drosophila melanogaster clone BACR38K14, complete sequence
          Length = 185823

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 472   ttcctgggccttctgccgca 491
             ||||||||||||||||||||
Sbjct: 41906 ttcctgggccttctgccgca 41925
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>gb|AC122923.4| Mus musculus BAC clone RP23-36G5 from 10, complete sequence
          Length = 242112

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 294    acacctcttctcagcttcca 313
              ||||||||||||||||||||
Sbjct: 217606 acacctcttctcagcttcca 217625
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>gb|AC092848.3| Homo sapiens BAC clone RP11-689A23 from 7, complete sequence
          Length = 66776

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 3     ctcttctcccttacgctggccact 26
             |||| |||||||||||||||||||
Sbjct: 54538 ctctgctcccttacgctggccact 54561
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>gb|AC142307.1| Pan troglodytes BAC clone RP43-131H12 from 7, complete sequence
          Length = 158646

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 3     ctcttctcccttacgctggccact 26
             |||| |||||||||||||||||||
Sbjct: 61372 ctctgctcccttacgctggccact 61349
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>emb|AL445649.15| Human DNA sequence from clone RP11-381O6 on chromosome 13, complete
              sequence
          Length = 190126

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 301    ttctcagcttccataagttc 320
              ||||||||||||||||||||
Sbjct: 154058 ttctcagcttccataagttc 154039
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>gb|AC158946.4| Mus musculus chromosome 1, clone RP24-267F8, complete sequence
          Length = 137800

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 7     tctcccttacgctggccact 26
             ||||||||||||||||||||
Sbjct: 14893 tctcccttacgctggccact 14912
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>ref|NM_167760.1| Drosophila melanogaster CG14476-RE, transcript variant E (CG14476),
           mRNA
          Length = 3264

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 472 ttcctgggccttctgccgca 491
           ||||||||||||||||||||
Sbjct: 765 ttcctgggccttctgccgca 746
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>ref|NM_167759.1| Drosophila melanogaster CG14476-RD, transcript variant D (CG14476),
           mRNA
          Length = 3138

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 472 ttcctgggccttctgccgca 491
           ||||||||||||||||||||
Sbjct: 639 ttcctgggccttctgccgca 620
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>ref|NM_167758.1| Drosophila melanogaster CG14476-RC, transcript variant C (CG14476),
           mRNA
          Length = 3089

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 472 ttcctgggccttctgccgca 491
           ||||||||||||||||||||
Sbjct: 590 ttcctgggccttctgccgca 571
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>ref|NM_167757.1| Drosophila melanogaster CG14476-RA, transcript variant A (CG14476),
           mRNA
          Length = 3144

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 472 ttcctgggccttctgccgca 491
           ||||||||||||||||||||
Sbjct: 647 ttcctgggccttctgccgca 628
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>ref|NM_143888.4| Drosophila melanogaster CG14476-RB, transcript variant B (CG14476),
           mRNA
          Length = 3135

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 472 ttcctgggccttctgccgca 491
           ||||||||||||||||||||
Sbjct: 636 ttcctgggccttctgccgca 617
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>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 468     cccattcctgggccttctgc 487
               ||||||||||||||||||||
Sbjct: 2734199 cccattcctgggccttctgc 2734218
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>emb|BX004973.10| Mouse DNA sequence from clone RP24-260G16 on chromosome 2, complete
             sequence
          Length = 114815

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 403   caggcatcagtgaccctggcatggagct 430
             |||||||| ||||||| |||||||||||
Sbjct: 67875 caggcatctgtgacccaggcatggagct 67902
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>emb|AL845260.15| Mouse DNA sequence from clone RP23-232J15 on chromosome 2, complete
              sequence
          Length = 217328

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 240    ctctctgaagacacaaggca 259
              ||||||||||||||||||||
Sbjct: 156425 ctctctgaagacacaaggca 156406
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>gb|AY587007.1| Bacteriophage T5 strain ATCC 11303-B5, complete genome
          Length = 121752

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 371    agcaattgcagtgattagtg 390
              ||||||||||||||||||||
Sbjct: 110867 agcaattgcagtgattagtg 110848
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>gb|AF145625.1|AF145625 Drosophila melanogaster clone GH04962 BcDNA.GH04962 (BcDNA.GH04962)
           mRNA, complete cds
          Length = 3174

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 472 ttcctgggccttctgccgca 491
           ||||||||||||||||||||
Sbjct: 655 ttcctgggccttctgccgca 636
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>gb|AE003122.5| Drosophila melanogaster chromosome X, section 72 of 74 of the complete
             sequence
          Length = 306367

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 472   ttcctgggccttctgccgca 491
             ||||||||||||||||||||
Sbjct: 82355 ttcctgggccttctgccgca 82374
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>emb|AL356032.4|CNS05TDD Human chromosome 14 DNA sequence BAC R-802A16 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 169936

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 317    gttcaatgagcgcgagagag 336
              ||||||||||||||||||||
Sbjct: 169748 gttcaatgagcgcgagagag 169729
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>emb|X75922.1|BT5LLP Bacteriophage T5 llp, oad, dmp genes
          Length = 1622

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 371 agcaattgcagtgattagtg 390
           ||||||||||||||||||||
Sbjct: 498 agcaattgcagtgattagtg 479
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>gb|AC132435.3| Mus musculus BAC clone RP23-223L12 from 10, complete sequence
          Length = 198383

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 294   acacctcttctcagcttcca 313
             ||||||||||||||||||||
Sbjct: 38216 acacctcttctcagcttcca 38235
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>emb|AL355887.4|CNS05TCY Human chromosome 14 DNA sequence BAC R-179O11 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 159183

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 317   gttcaatgagcgcgagagag 336
             ||||||||||||||||||||
Sbjct: 74725 gttcaatgagcgcgagagag 74706
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>emb|AL808017.4| Mouse DNA sequence from clone RP23-145G21 on chromosome X, complete
             sequence
          Length = 183291

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 459   cctgttattcccattcctgg 478
             ||||||||||||||||||||
Sbjct: 32251 cctgttattcccattcctgg 32232
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>emb|AL606536.13| Mouse DNA sequence from clone RP23-93C9 on chromosome 1, complete
             sequence
          Length = 180844

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 7     tctcccttacgctggccact 26
             ||||||||||||||||||||
Sbjct: 74216 tctcccttacgctggccact 74197


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,845,820
Number of Sequences: 3902068
Number of extensions: 3845820
Number of successful extensions: 75601
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 75467
Number of HSP's gapped (non-prelim): 134
length of query: 518
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 495
effective length of database: 17,143,297,704
effective search space: 8485932363480
effective search space used: 8485932363480
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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