>NUD21_ARATH (Q8VY81) Nudix hydrolase 21, chloroplast precursor (EC 3.6.1.-)|
           (AtNUDT21)
          Length = 198

 Score = 48.1 bits (113), Expect(2) = 5e-09
 Identities = 19/43 (44%), Positives = 28/43 (65%)
 Frame = +2

Query: 26  LGCWHYQSRRYQTTYEGIMYPLRVTHELQQWPEMASRNRTWVS 154
           LG W Y+S+R+   ++G M+PL V+ + + WPE   R R WVS
Sbjct: 128 LGKWQYKSKRHTMIHDGHMFPLLVSQQFEIWPESEFRQRKWVS 170



 Score = 32.0 bits (71), Expect(2) = 5e-09
 Identities = 12/29 (41%), Positives = 20/29 (68%)
 Frame = +3

Query: 255 TVQQVMEGCQHCWMREALEELVSRHAKPQ 341
           ++ + +E CQ+ WMREALE  ++R  + Q
Sbjct: 170 SLSEAIELCQNSWMREALEAFINRKCQTQ 198

>NUD17_ARATH (Q9ZU95) Nudix hydrolase 17, mitochondrial precursor (EC 3.6.1.-)|
           (AtNUDT17)
          Length = 182

 Score = 48.1 bits (113), Expect(2) = 2e-08
 Identities = 19/43 (44%), Positives = 28/43 (65%)
 Frame = +2

Query: 26  LGCWHYQSRRYQTTYEGIMYPLRVTHELQQWPEMASRNRTWVS 154
           LG W + S+   T YEG+M+P+ VT +L+ WPE   R R W++
Sbjct: 95  LGKWDFLSKSRGTYYEGLMFPMLVTEQLELWPEQHVRQRIWMN 137



 Score = 30.0 bits (66), Expect(2) = 2e-08
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = +3

Query: 258 VQQVMEGCQHCWMREALEELVSRHAKPQS 344
           V +  E C+  WM+EAL+ LV R + P +
Sbjct: 138 VTEAREACRDWWMKEALDVLVERLSSPMN 166

>NUDT4_ARATH (Q9LE73) Nudix hydrolase 4 (EC 3.6.1.-) (AtNUDT4) (ADP-ribose|
           pyrophosphatase) (EC 3.6.1.13) (NADH pyrophosphatase)
           (EC 3.6.1.22)
          Length = 207

 Score = 49.3 bits (116), Expect(2) = 4e-08
 Identities = 19/43 (44%), Positives = 28/43 (65%)
 Frame = +2

Query: 26  LGCWHYQSRRYQTTYEGIMYPLRVTHELQQWPEMASRNRTWVS 154
           LG W Y+S+R+   ++G M+ L V+ E ++WPE   R R WVS
Sbjct: 131 LGKWQYKSKRHSIIHDGYMFALLVSQEFERWPEAEMRQRRWVS 173



 Score = 27.7 bits (60), Expect(2) = 4e-08
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = +3

Query: 255 TVQQVMEGCQHCWMREALEELVS 323
           ++ +  E CQ+ WMREALE  ++
Sbjct: 173 SLDEAREVCQNWWMREALEAFIN 195

>NUD18_ARATH (Q9LQU5) Nudix hydrolase 18, mitochondrial precursor (EC 3.6.1.-)|
           (AtNUDT18)
          Length = 176

 Score = 45.8 bits (107), Expect(2) = 7e-07
 Identities = 19/42 (45%), Positives = 25/42 (59%)
 Frame = +2

Query: 26  LGCWHYQSRRYQTTYEGIMYPLRVTHELQQWPEMASRNRTWV 151
           LG W + S+   T YEG M+P+ V  EL+ WPE   R R W+
Sbjct: 90  LGKWDFLSKSKGTFYEGFMFPMLVKEELELWPEQHLRQRIWM 131



 Score = 26.9 bits (58), Expect(2) = 7e-07
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = +3

Query: 258 VQQVMEGCQHCWMREALEELVSR 326
           V +  + C+  WM+EAL+ LV R
Sbjct: 133 VDEARDACRDWWMKEALDVLVQR 155

>NUD12_ARATH (Q93ZY7) Nudix hydrolase 12, mitochondrial precursor (EC 3.6.1.-)|
           (AtNUDT12)
          Length = 203

 Score = 40.0 bits (92), Expect(2) = 3e-05
 Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 6/49 (12%)
 Frame = +2

Query: 26  LGCWHYQSRRYQTTYE------GIMYPLRVTHELQQWPEMASRNRTWVS 154
           LG W ++S+      E      G M+ L+VT EL+ WPE  +R R W++
Sbjct: 97  LGVWEFRSKSSTVEDECLGGCKGYMFALKVTEELEDWPERKNRERRWLT 145



 Score = 27.3 bits (59), Expect(2) = 3e-05
 Identities = 10/22 (45%), Positives = 17/22 (77%)
 Frame = +3

Query: 255 TVQQVMEGCQHCWMREALEELV 320
           TV++ +E C++ WM+ ALEE +
Sbjct: 145 TVKEALELCRYEWMQRALEEFL 166

>NUD16_ARATH (Q9LHK1) Nudix hydrolase 16, mitochondrial precursor (EC 3.6.1.-)|
           (AtNUDT16)
          Length = 180

 Score = 34.3 bits (77), Expect(2) = 4e-04
 Identities = 18/49 (36%), Positives = 28/49 (57%), Gaps = 6/49 (12%)
 Frame = +2

Query: 26  LGCWHYQSRRYQTTY--EGI----MYPLRVTHELQQWPEMASRNRTWVS 154
           LG + ++S+ +Q  +  EG+    MY L V  EL  WPE  +R R W++
Sbjct: 93  LGNYEFKSKSHQDEFSPEGLCKAAMYALYVKEELATWPEHETRTRKWLT 141



 Score = 29.3 bits (64), Expect(2) = 4e-04
 Identities = 9/20 (45%), Positives = 16/20 (80%)
 Frame = +3

Query: 255 TVQQVMEGCQHCWMREALEE 314
           T+++ +E C+H WM++AL E
Sbjct: 141 TIEEAVESCRHPWMKDALVE 160

>NUD13_ARATH (Q52K88) Nudix hydrolase 13, mitochondrial precursor (EC 3.6.1.-)|
           (AtNUDT13)
          Length = 202

 Score = 33.1 bits (74), Expect(2) = 0.010
 Identities = 16/51 (31%), Positives = 23/51 (45%), Gaps = 8/51 (15%)
 Frame = +2

Query: 26  LGCWHYQSRRYQTTYE--------GIMYPLRVTHELQQWPEMASRNRTWVS 154
           LG W ++S+      +        G M+ L V  EL  WPE   R R W++
Sbjct: 96  LGVWEFRSKSSSVEADCCLGGGCKGYMFALEVKEELAIWPEQDDRERRWLN 146



 Score = 25.4 bits (54), Expect(2) = 0.010
 Identities = 9/21 (42%), Positives = 16/21 (76%)
 Frame = +3

Query: 258 VQQVMEGCQHCWMREALEELV 320
           V++ +E C++ WM+ ALEE +
Sbjct: 147 VKEALELCRYEWMQSALEEFL 167

>PDLI5_RAT (Q62920) PDZ and LIM domain protein 5 (Enigma homolog) (Enigma-like|
           PDZ and LIM domains protein)
          Length = 591

 Score = 31.2 bits (69), Expect = 3.0
 Identities = 15/41 (36%), Positives = 21/41 (51%)
 Frame = -2

Query: 343 DCGLACRETSSSSASRIQQCWHPSMTCCTVACSKSIGNHTF 221
           +CG   R+      + ++Q WH S   C VAC K I N+ F
Sbjct: 473 ECGRCQRKILGEVINALKQTWHVSCFVC-VACGKPIRNNVF 512

>PDLI5_MOUSE (Q8CI51) PDZ and LIM domain protein 5 (Enigma homolog) (Enigma-like|
           PDZ and LIM domains protein)
          Length = 590

 Score = 31.2 bits (69), Expect = 3.0
 Identities = 15/41 (36%), Positives = 21/41 (51%)
 Frame = -2

Query: 343 DCGLACRETSSSSASRIQQCWHPSMTCCTVACSKSIGNHTF 221
           +CG   R+      + ++Q WH S   C VAC K I N+ F
Sbjct: 472 ECGRCQRKILGEVINALKQTWHVSCFVC-VACGKPIRNNVF 511

>PDLI5_HUMAN (Q96HC4) PDZ and LIM domain protein 5 (Enigma homolog) (Enigma-like|
           PDZ and LIM domains protein)
          Length = 595

 Score = 31.2 bits (69), Expect = 3.0
 Identities = 15/41 (36%), Positives = 21/41 (51%)
 Frame = -2

Query: 343 DCGLACRETSSSSASRIQQCWHPSMTCCTVACSKSIGNHTF 221
           +CG   R+      + ++Q WH S   C VAC K I N+ F
Sbjct: 477 ECGRCQRKILGEVINALKQTWHVSCFVC-VACGKPIRNNVF 516

>RARB_MOUSE (P22605) Retinoic acid receptor beta (RAR-beta)|
          Length = 482

 Score = 30.8 bits (68), Expect = 3.9
 Identities = 15/46 (32%), Positives = 19/46 (41%)
 Frame = -2

Query: 376 PPAACSVVHRADCGLACRETSSSSASRIQQCWHPSMTCCTVACSKS 239
           PP+ CS    A  G AC+ T+  S       W PS+       S S
Sbjct: 49  PPSGCSTPSPASVGQACQRTTGGSQFAASTKWTPSLNAAIETQSTS 94

>MTA_SPAAU (P52727) Metallothionein A (MT A)|
          Length = 60

 Score = 30.4 bits (67), Expect = 5.1
 Identities = 15/44 (34%), Positives = 20/44 (45%)
 Frame = -2

Query: 373 PAACSVVHRADCGLACRETSSSSASRIQQCWHPSMTCCTVACSK 242
           P  CS     +CG +C  T+ S  S  + C     +CC   CSK
Sbjct: 3   PCECSKTGTCNCGGSCTCTNCSCTSCKKSC----CSCCPAGCSK 42

>DUS10_HUMAN (Q9Y6W6) Dual specificity protein phosphatase 10 (EC 3.1.3.48) (EC|
           3.1.3.16) (Mitogen-activated protein kinase phosphatase
           5) (MAP kinase phosphatase 5) (MKP-5)
          Length = 482

 Score = 30.4 bits (67), Expect = 5.1
 Identities = 16/46 (34%), Positives = 21/46 (45%)
 Frame = -2

Query: 388 SSPHPPAACSVVHRADCGLACRETSSSSASRIQQCWHPSMTCCTVA 251
           S+ HPP   + V            SSS ++R   C   S +CCTVA
Sbjct: 39  SNSHPPVIATTVVSLKAANLTYMPSSSGSARSLNCGCSSASCCTVA 84

>K0552_HUMAN (O60299) Protein KIAA0552|
          Length = 673

 Score = 30.0 bits (66), Expect = 6.6
 Identities = 19/59 (32%), Positives = 27/59 (45%)
 Frame = +3

Query: 237 IDFEQATVQQVMEGCQHCWMREALEELVSRHAKPQSAL*TTEQAAGGWGLERARLSQEK 413
           ++  +A V QV+E  Q  W RE  E       K Q      ++A  G  L+  RL Q+K
Sbjct: 342 LEQSEAAVAQVLEERQKAWERELAELRQGCSGKLQQVARRAQRAQQGLQLQVLRLQQDK 400

>MT_LIZAU (O13257) Metallothionein (MT)|
          Length = 60

 Score = 29.6 bits (65), Expect = 8.7
 Identities = 15/44 (34%), Positives = 19/44 (43%)
 Frame = -2

Query: 373 PAACSVVHRADCGLACRETSSSSASRIQQCWHPSMTCCTVACSK 242
           P  CS   +  CG +C  T+ S  S  + C      CC   CSK
Sbjct: 3   PCECSKTGKCSCGGSCTCTNCSCTSCKKSC----CPCCPSGCSK 42

>MTA_CYPS1 (Q92044) Metallothionein A (MT A)|
          Length = 60

 Score = 29.6 bits (65), Expect = 8.7
 Identities = 14/44 (31%), Positives = 20/44 (45%)
 Frame = -2

Query: 373 PAACSVVHRADCGLACRETSSSSASRIQQCWHPSMTCCTVACSK 242
           P  CS   + +CG +C  T+ S     + C     +CC   CSK
Sbjct: 3   PCECSKTGKCNCGTSCTCTNCSCKCCKKSC----CSCCPSGCSK 42


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 71,905,403
Number of Sequences: 219361
Number of extensions: 1253201
Number of successful extensions: 3647
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 3534
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3646
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6541540170
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)