ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags18a17
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 153 9e-34
2dbj|AP005319.3| Oryza sativa (japonica cultivar-group) genomic D... 153 9e-34
3ref|XM_467654.1| Oryza sativa (japonica cultivar-group), mRNA 151 4e-33
4ref|XM_506958.1| PREDICTED Oryza sativa (japonica cultivar-group... 151 4e-33
5dbj|AK104571.1| Oryza sativa (japonica cultivar-group) cDNA clon... 151 4e-33
6dbj|AK059780.1| Oryza sativa (japonica cultivar-group) cDNA clon... 151 4e-33
7dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 60 1e-05
8dbj|AP003490.3| Oryza sativa (japonica cultivar-group) genomic D... 60 1e-05
9dbj|AK064894.1| Oryza sativa (japonica cultivar-group) cDNA clon... 60 1e-05
10gb|AC093500.2| Drosophila melanogaster 3L BAC RP98-29P5 (Roswell... 42 2.3
11gb|AC010661.8| Drosophila melanogaster 3L BAC RP98-13A12 (Roswel... 42 2.3
12gb|AE003565.3| Drosophila melanogaster chromosome 3L, section 20... 42 2.3
13gb|AC102602.9| Mus musculus chromosome 9, clone RP23-381L11, com... 42 2.3
14gb|AE017343.1| Cryptococcus neoformans var. neoformans JEC21 chr... 40 9.2
15gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete ... 40 9.2
16ref|XM_588922.2| PREDICTED: Bos taurus similar to Fc alpha/mu re... 40 9.2
17ref|XM_956316.1| Neurospora crassa OR74A hypothetical protein ( ... 40 9.2
18ref|XM_326815.1| Neurospora crassa OR74A hypothetical protein ( ... 40 9.2
19ref|XM_569868.1| Cryptococcus neoformans var. neoformans JEC21 p... 40 9.2
20ref|XM_748860.1| Aspergillus fumigatus Af293 C6 transcription fa... 40 9.2
21emb|Z82095.1|CEZK849 Caenorhabditis elegans Cosmid ZK849, comple... 40 9.2
22gb|CP000323.1| Psychrobacter cryohalolentis K5, complete genome 40 9.2
23emb|AL513464.1|NCB12K8 Neurospora crassa DNA linkage group V BAC... 40 9.2
24emb|AL451017.1|NC12F11 Neurospora crassa DNA linkage group V Cos... 40 9.2
25gb|AE017340.1| Idiomarina loihiensis L2TR, complete genome 40 9.2
26ref|NM_069127.3| Caenorhabditis elegans T28C6.7 (T28C6.7) mRNA, ... 40 9.2
27dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.2
28gb|AC154188.2| Mus musculus BAC clone RP24-455C11 from chromosom... 40 9.2
29dbj|BA000001.2| Pyrococcus horikoshii OT3 DNA, complete genome 40 9.2
30dbj|BA000028.3| Oceanobacillus iheyensis HTE831 DNA, complete ge... 40 9.2
31emb|Z54238.1|CET28C6 Caenorhabditis elegans Cosmid T28C6, comple... 40 9.2
32gb|AC006227.1|AC006227 Homo sapiens, clone hRPK.16_A_1, complete... 40 9.2
33emb|CT573031.6| Mouse DNA sequence from clone RP24-244H14 on chr... 40 9.2
34gb|AC129720.2| Oryza sativa (japonica cultivar-group) chromosome... 40 9.2 
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  153 bits (77), Expect = 9e-34
 Identities = 113/125 (90%)
 Strand = Plus / Plus

                                                                            
Query: 26       ctcggctgctggcactaccagagccgccgctaccagaccacctacgagggcatcatgtac 85
                |||||||||||| ||||| |||||||||||||| | ||||||||||||||| |||||| |
Sbjct: 30644493 ctcggctgctggtactacaagagccgccgctacgacaccacctacgagggcttcatgttc 30644552

                                                                            
Query: 86       cccctccgcgtcacccacgagctccagcagtggcccgagatggcctcccgcaaccgcacc 145
                || |||||||||||| |||||||||  ||||||||||||||| |||||||||| ||||||
Sbjct: 30644553 cctctccgcgtcaccgacgagctcctccagtggcccgagatgtcctcccgcaagcgcacc 30644612

                     
Query: 146      tgggt 150
                |||||
Sbjct: 30644613 tgggt 30644617



 Score =  107 bits (54), Expect = 5e-20
 Identities = 84/94 (89%)
 Strand = Plus / Plus

                                                                            
Query: 240      gattttgagcaggcaacggtgcagcaggtcatggaaggatgccagcactgctggatgcgg 299
                ||||||| |||||| |||||||||||||  ||||| |||||||||||| | |||||||| 
Sbjct: 30644739 gattttgtgcaggccacggtgcagcaggcgatggatggatgccagcacggttggatgcgt 30644798

                                                  
Query: 300      gaggcgctcgaggagctcgtctcccggcacgcca 333
                ||||||||||||  ||||||||||||||||||||
Sbjct: 30644799 gaggcgctcgagcggctcgtctcccggcacgcca 30644832
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>dbj|AP005319.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0643A10
          Length = 187931

 Score =  153 bits (77), Expect = 9e-34
 Identities = 113/125 (90%)
 Strand = Plus / Plus

                                                                          
Query: 26     ctcggctgctggcactaccagagccgccgctaccagaccacctacgagggcatcatgtac 85
              |||||||||||| ||||| |||||||||||||| | ||||||||||||||| |||||| |
Sbjct: 156501 ctcggctgctggtactacaagagccgccgctacgacaccacctacgagggcttcatgttc 156560

                                                                          
Query: 86     cccctccgcgtcacccacgagctccagcagtggcccgagatggcctcccgcaaccgcacc 145
              || |||||||||||| |||||||||  ||||||||||||||| |||||||||| ||||||
Sbjct: 156561 cctctccgcgtcaccgacgagctcctccagtggcccgagatgtcctcccgcaagcgcacc 156620

                   
Query: 146    tgggt 150
              |||||
Sbjct: 156621 tgggt 156625



 Score =  107 bits (54), Expect = 5e-20
 Identities = 84/94 (89%)
 Strand = Plus / Plus

                                                                          
Query: 240    gattttgagcaggcaacggtgcagcaggtcatggaaggatgccagcactgctggatgcgg 299
              ||||||| |||||| |||||||||||||  ||||| |||||||||||| | |||||||| 
Sbjct: 156747 gattttgtgcaggccacggtgcagcaggcgatggatggatgccagcacggttggatgcgt 156806

                                                
Query: 300    gaggcgctcgaggagctcgtctcccggcacgcca 333
              ||||||||||||  ||||||||||||||||||||
Sbjct: 156807 gaggcgctcgagcggctcgtctcccggcacgcca 156840
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>ref|XM_467654.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 985

 Score =  151 bits (76), Expect = 4e-33
 Identities = 112/124 (90%)
 Strand = Plus / Plus

                                                                       
Query: 26  ctcggctgctggcactaccagagccgccgctaccagaccacctacgagggcatcatgtac 85
           |||||||||||| ||||| |||||||||||||| | ||||||||||||||| |||||| |
Sbjct: 330 ctcggctgctggtactacaagagccgccgctacgacaccacctacgagggcttcatgttc 389

                                                                       
Query: 86  cccctccgcgtcacccacgagctccagcagtggcccgagatggcctcccgcaaccgcacc 145
           || |||||||||||| |||||||||  ||||||||||||||| |||||||||| ||||||
Sbjct: 390 cctctccgcgtcaccgacgagctcctccagtggcccgagatgtcctcccgcaagcgcacc 449

               
Query: 146 tggg 149
           ||||
Sbjct: 450 tggg 453



 Score = 93.7 bits (47), Expect = 7e-16
 Identities = 71/79 (89%)
 Strand = Plus / Plus

                                                                       
Query: 255 acggtgcagcaggtcatggaaggatgccagcactgctggatgcgggaggcgctcgaggag 314
           |||||||||||||  ||||| |||||||||||| | |||||||| ||||||||||||  |
Sbjct: 456 acggtgcagcaggcgatggatggatgccagcacggttggatgcgtgaggcgctcgagcgg 515

                              
Query: 315 ctcgtctcccggcacgcca 333
           |||||||||||||||||||
Sbjct: 516 ctcgtctcccggcacgcca 534
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>ref|XM_506958.1| PREDICTED Oryza sativa (japonica cultivar-group), P0643A10.49 mRNA
          Length = 1063

 Score =  151 bits (76), Expect = 4e-33
 Identities = 112/124 (90%)
 Strand = Plus / Plus

                                                                       
Query: 26  ctcggctgctggcactaccagagccgccgctaccagaccacctacgagggcatcatgtac 85
           |||||||||||| ||||| |||||||||||||| | ||||||||||||||| |||||| |
Sbjct: 333 ctcggctgctggtactacaagagccgccgctacgacaccacctacgagggcttcatgttc 392

                                                                       
Query: 86  cccctccgcgtcacccacgagctccagcagtggcccgagatggcctcccgcaaccgcacc 145
           || |||||||||||| |||||||||  ||||||||||||||| |||||||||| ||||||
Sbjct: 393 cctctccgcgtcaccgacgagctcctccagtggcccgagatgtcctcccgcaagcgcacc 452

               
Query: 146 tggg 149
           ||||
Sbjct: 453 tggg 456



 Score = 93.7 bits (47), Expect = 7e-16
 Identities = 71/79 (89%)
 Strand = Plus / Plus

                                                                       
Query: 255 acggtgcagcaggtcatggaaggatgccagcactgctggatgcgggaggcgctcgaggag 314
           |||||||||||||  ||||| |||||||||||| | |||||||| ||||||||||||  |
Sbjct: 459 acggtgcagcaggcgatggatggatgccagcacggttggatgcgtgaggcgctcgagcgg 518

                              
Query: 315 ctcgtctcccggcacgcca 333
           |||||||||||||||||||
Sbjct: 519 ctcgtctcccggcacgcca 537
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>dbj|AK104571.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-306-G07, full
           insert sequence
          Length = 985

 Score =  151 bits (76), Expect = 4e-33
 Identities = 112/124 (90%)
 Strand = Plus / Plus

                                                                       
Query: 26  ctcggctgctggcactaccagagccgccgctaccagaccacctacgagggcatcatgtac 85
           |||||||||||| ||||| |||||||||||||| | ||||||||||||||| |||||| |
Sbjct: 330 ctcggctgctggtactacaagagccgccgctacgacaccacctacgagggcttcatgttc 389

                                                                       
Query: 86  cccctccgcgtcacccacgagctccagcagtggcccgagatggcctcccgcaaccgcacc 145
           || |||||||||||| |||||||||  ||||||||||||||| |||||||||| ||||||
Sbjct: 390 cctctccgcgtcaccgacgagctcctccagtggcccgagatgtcctcccgcaagcgcacc 449

               
Query: 146 tggg 149
           ||||
Sbjct: 450 tggg 453



 Score = 93.7 bits (47), Expect = 7e-16
 Identities = 71/79 (89%)
 Strand = Plus / Plus

                                                                       
Query: 255 acggtgcagcaggtcatggaaggatgccagcactgctggatgcgggaggcgctcgaggag 314
           |||||||||||||  ||||| |||||||||||| | |||||||| ||||||||||||  |
Sbjct: 456 acggtgcagcaggcgatggatggatgccagcacggttggatgcgtgaggcgctcgagcgg 515

                              
Query: 315 ctcgtctcccggcacgcca 333
           |||||||||||||||||||
Sbjct: 516 ctcgtctcccggcacgcca 534
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>dbj|AK059780.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-C03, full
           insert sequence
          Length = 1063

 Score =  151 bits (76), Expect = 4e-33
 Identities = 112/124 (90%)
 Strand = Plus / Plus

                                                                       
Query: 26  ctcggctgctggcactaccagagccgccgctaccagaccacctacgagggcatcatgtac 85
           |||||||||||| ||||| |||||||||||||| | ||||||||||||||| |||||| |
Sbjct: 333 ctcggctgctggtactacaagagccgccgctacgacaccacctacgagggcttcatgttc 392

                                                                       
Query: 86  cccctccgcgtcacccacgagctccagcagtggcccgagatggcctcccgcaaccgcacc 145
           || |||||||||||| |||||||||  ||||||||||||||| |||||||||| ||||||
Sbjct: 393 cctctccgcgtcaccgacgagctcctccagtggcccgagatgtcctcccgcaagcgcacc 452

               
Query: 146 tggg 149
           ||||
Sbjct: 453 tggg 456



 Score = 93.7 bits (47), Expect = 7e-16
 Identities = 71/79 (89%)
 Strand = Plus / Plus

                                                                       
Query: 255 acggtgcagcaggtcatggaaggatgccagcactgctggatgcgggaggcgctcgaggag 314
           |||||||||||||  ||||| |||||||||||| | |||||||| ||||||||||||  |
Sbjct: 459 acggtgcagcaggcgatggatggatgccagcacggttggatgcgtgaggcgctcgagcgg 518

                              
Query: 315 ctcgtctcccggcacgcca 333
           |||||||||||||||||||
Sbjct: 519 ctcgtctcccggcacgcca 537
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 75/90 (83%)
 Strand = Plus / Minus

                                                                           
Query: 40      ctaccagagccgccgctaccagaccacctacgagggcatcatgtaccccctccgcgtcac 99
               ||||| ||||||||||||| |  |||||||||||||| || | | ||| ||||| |||||
Sbjct: 8080395 ctaccggagccgccgctacgacgccacctacgagggcttcgtcttcccgctccgggtcac 8080336

                                             
Query: 100     ccacgagctccagcagtggcccgagatggc 129
               | |||||||| | | |||||| ||||||||
Sbjct: 8080335 cgacgagctcgaccggtggccggagatggc 8080306
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>dbj|AP003490.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0592E11
          Length = 153734

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 75/90 (83%)
 Strand = Plus / Minus

                                                                          
Query: 40     ctaccagagccgccgctaccagaccacctacgagggcatcatgtaccccctccgcgtcac 99
              ||||| ||||||||||||| |  |||||||||||||| || | | ||| ||||| |||||
Sbjct: 104164 ctaccggagccgccgctacgacgccacctacgagggcttcgtcttcccgctccgggtcac 104105

                                            
Query: 100    ccacgagctccagcagtggcccgagatggc 129
              | |||||||| | | |||||| ||||||||
Sbjct: 104104 cgacgagctcgaccggtggccggagatggc 104075
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>dbj|AK064894.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000K23, full
           insert sequence
          Length = 781

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 75/90 (83%)
 Strand = Plus / Plus

                                                                       
Query: 40  ctaccagagccgccgctaccagaccacctacgagggcatcatgtaccccctccgcgtcac 99
           ||||| ||||||||||||| |  |||||||||||||| || | | ||| ||||| |||||
Sbjct: 407 ctaccggagccgccgctacgacgccacctacgagggcttcgtcttcccgctccgggtcac 466

                                         
Query: 100 ccacgagctccagcagtggcccgagatggc 129
           | |||||||| | | |||||| ||||||||
Sbjct: 467 cgacgagctcgaccggtggccggagatggc 496
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>gb|AC093500.2| Drosophila melanogaster 3L BAC RP98-29P5 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 173558

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 572   ggcgcagagtcgtcgtcgtcg 592
             |||||||||||||||||||||
Sbjct: 36950 ggcgcagagtcgtcgtcgtcg 36970
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>gb|AC010661.8| Drosophila melanogaster 3L BAC RP98-13A12 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 163115

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 572    ggcgcagagtcgtcgtcgtcg 592
              |||||||||||||||||||||
Sbjct: 142200 ggcgcagagtcgtcgtcgtcg 142220
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>gb|AE003565.3| Drosophila melanogaster chromosome 3L, section 20 of 83 of the complete
              sequence
          Length = 284268

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 572    ggcgcagagtcgtcgtcgtcg 592
              |||||||||||||||||||||
Sbjct: 206187 ggcgcagagtcgtcgtcgtcg 206207
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>gb|AC102602.9| Mus musculus chromosome 9, clone RP23-381L11, complete sequence
          Length = 253504

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 264   caggtcatggaaggatgccag 284
             |||||||||||||||||||||
Sbjct: 74307 caggtcatggaaggatgccag 74287
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>gb|AE017343.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 3, complete
               sequence
          Length = 2105742

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 238     ttgattttgagcaggcaacg 257
               ||||||||||||||||||||
Sbjct: 1566398 ttgattttgagcaggcaacg 1566379
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>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome
          Length = 2584158

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 295     tgcgggaggcgctcgaggag 314
               ||||||||||||||||||||
Sbjct: 1574053 tgcgggaggcgctcgaggag 1574034
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>ref|XM_588922.2| PREDICTED: Bos taurus similar to Fc alpha/mu receptor (LOC511565),
            mRNA
          Length = 1622

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 280  gccagcactgctggatgcgg 299
            ||||||||||||||||||||
Sbjct: 1522 gccagcactgctggatgcgg 1541
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>ref|XM_956316.1| Neurospora crassa OR74A hypothetical protein ( (AL451017) related to
            SMC1 protein [Neurospora crassa OR74A]  ) (NCU01323.1)
            partial mRNA
          Length = 3726

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 297  cgggaggcgctcgaggagct 316
            ||||||||||||||||||||
Sbjct: 2605 cgggaggcgctcgaggagct 2624
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>ref|XM_326815.1| Neurospora crassa OR74A hypothetical protein ( (AL451017) related to
            SMC1 protein [Neurospora crassa OR74A]  ) (NCU01323.1)
            partial mRNA
          Length = 3726

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 297  cgggaggcgctcgaggagct 316
            ||||||||||||||||||||
Sbjct: 2605 cgggaggcgctcgaggagct 2624
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>ref|XM_569868.1| Cryptococcus neoformans var. neoformans JEC21 protein
            serine/threonine phosphatase 4 regulatory subunit 1
            (CNC05220) partial mRNA
          Length = 5524

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 238  ttgattttgagcaggcaacg 257
            ||||||||||||||||||||
Sbjct: 1264 ttgattttgagcaggcaacg 1245
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>ref|XM_748860.1| Aspergillus fumigatus Af293 C6 transcription factor (Afu5g06800)
            partial mRNA
          Length = 1821

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 461  tcctcggtgcagcggcaggc 480
            ||||||||||||||||||||
Sbjct: 1618 tcctcggtgcagcggcaggc 1637
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>emb|Z82095.1|CEZK849 Caenorhabditis elegans Cosmid ZK849, complete sequence
          Length = 29544

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 230  atttccaattgattttgagc 249
            ||||||||||||||||||||
Sbjct: 6376 atttccaattgattttgagc 6357
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>gb|CP000323.1| Psychrobacter cryohalolentis K5, complete genome
          Length = 3059876

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 178     tagctgctgcaaactcaaat 197
               ||||||||||||||||||||
Sbjct: 2032138 tagctgctgcaaactcaaat 2032157
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>emb|AL513464.1|NCB12K8 Neurospora crassa DNA linkage group V BAC clone B12K8
          Length = 67453

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 297   cgggaggcgctcgaggagct 316
             ||||||||||||||||||||
Sbjct: 60454 cgggaggcgctcgaggagct 60435
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>emb|AL451017.1|NC12F11 Neurospora crassa DNA linkage group V Cosmid contig 12F11
          Length = 74317

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 297  cgggaggcgctcgaggagct 316
            ||||||||||||||||||||
Sbjct: 9919 cgggaggcgctcgaggagct 9900
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>gb|AE017340.1| Idiomarina loihiensis L2TR, complete genome
          Length = 2839318

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 593    cggcaaataatggggacgaa 612
              ||||||||||||||||||||
Sbjct: 297838 cggcaaataatggggacgaa 297857
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>ref|NM_069127.3| Caenorhabditis elegans T28C6.7 (T28C6.7) mRNA, complete cds
          Length = 7483

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 244  ttgagcaggcaacggtgcag 263
            ||||||||||||||||||||
Sbjct: 2433 ttgagcaggcaacggtgcag 2414
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 424     gagcaccatcgtcctcgtcg 443
               ||||||||||||||||||||
Sbjct: 1536412 gagcaccatcgtcctcgtcg 1536393



 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 424     gagcaccatcgtcctcgtcg 443
               ||||||||||||||||||||
Sbjct: 1528112 gagcaccatcgtcctcgtcg 1528093
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>gb|AC154188.2| Mus musculus BAC clone RP24-455C11 from chromosome 16, complete
             sequence
          Length = 177978

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 270   atggaaggatgccagcactg 289
             ||||||||||||||||||||
Sbjct: 30906 atggaaggatgccagcactg 30925
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>dbj|BA000001.2| Pyrococcus horikoshii OT3 DNA, complete genome
          Length = 1738505

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 159     ttcctcgcctccttcaatct 178
               ||||||||||||||||||||
Sbjct: 1137679 ttcctcgcctccttcaatct 1137698
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>dbj|BA000028.3| Oceanobacillus iheyensis HTE831 DNA, complete genome
          Length = 3630528

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 220     taaacgtgtgatttccaatt 239
               ||||||||||||||||||||
Sbjct: 2134916 taaacgtgtgatttccaatt 2134935
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>emb|Z54238.1|CET28C6 Caenorhabditis elegans Cosmid T28C6, complete sequence
          Length = 33819

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 244   ttgagcaggcaacggtgcag 263
             ||||||||||||||||||||
Sbjct: 26700 ttgagcaggcaacggtgcag 26681
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>gb|AC006227.1|AC006227 Homo sapiens, clone hRPK.16_A_1, complete sequence
          Length = 153337

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 624    tgtgaggtactagtagagat 643
              ||||||||||||||||||||
Sbjct: 143403 tgtgaggtactagtagagat 143422
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>emb|CT573031.6| Mouse DNA sequence from clone RP24-244H14 on chromosome 16, complete
              sequence
          Length = 170444

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 270    atggaaggatgccagcactg 289
              ||||||||||||||||||||
Sbjct: 118455 atggaaggatgccagcactg 118474
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>gb|AC129720.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0683F12,
              complete sequence
          Length = 144455

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 424    gagcaccatcgtcctcgtcg 443
              ||||||||||||||||||||
Sbjct: 130492 gagcaccatcgtcctcgtcg 130473



 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 424    gagcaccatcgtcctcgtcg 443
              ||||||||||||||||||||
Sbjct: 122192 gagcaccatcgtcctcgtcg 122173


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,177,434
Number of Sequences: 3902068
Number of extensions: 4177434
Number of successful extensions: 96144
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 95790
Number of HSP's gapped (non-prelim): 354
length of query: 671
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 648
effective length of database: 17,143,297,704
effective search space: 11108856912192
effective search space used: 11108856912192
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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