ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags18a10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC137752.4| Oryza sativa (japonica cultivar-group) chromosome... 202 2e-49
2dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 202 2e-49
3dbj|AK105983.1| Oryza sativa (japonica cultivar-group) cDNA clon... 202 2e-49
4dbj|AK105624.1| Oryza sativa (japonica cultivar-group) cDNA clon... 202 2e-49
5dbj|AK101450.1| Oryza sativa (japonica cultivar-group) cDNA clon... 202 2e-49
6dbj|AK071541.1| Oryza sativa (japonica cultivar-group) cDNA clon... 202 2e-49
7gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 202 2e-49
8gb|AY105338.1| Zea mays PCO102700 mRNA sequence 176 1e-41
9dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 117 1e-23
10dbj|AK101088.1| Oryza sativa (japonica cultivar-group) cDNA clon... 117 1e-23
11gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 117 1e-23
12emb|AL713942.4|CNS07YPB Oryza sativa chromosome 12, . BAC OSJNBa... 117 1e-23
13emb|AL954826.3|CNS08CD2 Oryza sativa chromosome 12, . BAC OSJNBb... 117 1e-23
14ref|XM_779683.1| PREDICTED: Strongylocentrotus purpuratus simila... 76 3e-11
15gb|AY224188.1| Medicago truncatula adenosylhomocysteinase (AHC1)... 66 3e-08
16ref|NM_117467.2| Arabidopsis thaliana SHM4 (SERINE HYDROXYMETHYL... 56 3e-05
17gb|AY142551.1| Arabidopsis thaliana clone RAFL08-14-N15 (R11225)... 56 3e-05
18emb|Z97335.2|ATFCA0 Arabidopsis thaliana DNA chromosome 4, ESSA ... 56 3e-05
19emb|AL161537.2|ATCHRIV37 Arabidopsis thaliana DNA chromosome 4, ... 56 3e-05
20gb|AY093987.1| Arabidopsis thaliana AT4g13930/dl3005c mRNA, comp... 56 3e-05
21gb|AF361589.1| Arabidopsis thaliana AT4g13930/dl3005c mRNA, comp... 56 3e-05
22gb|AF324991.2|AF324991 Arabidopsis thaliana AT4g13930 (AT4g13930... 56 3e-05
23emb|BX827403.1|CNS0A2GP Arabidopsis thaliana Full-length cDNA Co... 56 3e-05
24gb|AY086929.1| Arabidopsis thaliana clone 29662 mRNA, complete s... 56 3e-05
25gb|BC038598.1| Homo sapiens serine hydroxymethyltransferase 1 (s... 52 5e-04
26gb|BC007979.2| Homo sapiens serine hydroxymethyltransferase 1 (s... 52 5e-04
27ref|NM_004169.3| Homo sapiens serine hydroxymethyltransferase 1 ... 52 5e-04
28ref|NM_148918.1| Homo sapiens serine hydroxymethyltransferase 1 ... 52 5e-04
29emb|Z25859.1|FPGHMT1 Flaveria pringlei mRNA for glycine hydroxym... 52 5e-04
30emb|Y14487.1|HSY14487 Homo sapiens mRNA for cytosolic serine hyd... 52 5e-04
31emb|Y14486.1|HSY14486 Homo sapiens mRNA for cytosolic serine hyd... 52 5e-04
32emb|CR613144.1| full-length cDNA clone CS0DK008YG18 of HeLa cell... 52 5e-04
33emb|CR594273.1| full-length cDNA clone CS0DC003YO14 of Neuroblas... 52 5e-04
34emb|CR592100.1| full-length cDNA clone CS0DC026YC17 of Neuroblas... 52 5e-04
35dbj|AK223552.1| Homo sapiens mRNA for serine hydroxymethyltransf... 52 5e-04
36gb|AC127537.7| Homo sapiens chromosome 17, clone RP1-178F10, com... 52 5e-04
37emb|AL035367.5|HSF10178 Homo sapiens chromosome 17 sequence from... 52 5e-04
38emb|AL353997.3|HS37N07 Homo sapiens chromosome 17 from PAC RPCI... 52 5e-04
39gb|BC022874.1| Homo sapiens serine hydroxymethyltransferase 1 (s... 52 5e-04
40gb|L11931.1|HUMSHMTA Human cytosolic serine hydroxymethyltransfe... 52 5e-04
41emb|Y14485.1|HSY14485 Homo sapiens mRNA for cytosolic serine hyd... 52 5e-04
42gb|L23928.1|HUMHSH Homo sapiens serine hydroxymethyltransferase ... 52 5e-04
43dbj|AP002373.3| Homo sapiens genomic DNA, chromosome 11q, clone:... 46 0.030
44emb|CR857151.1| Pongo pygmaeus mRNA; cDNA DKFZp469J1932 (from cl... 44 0.12
45dbj|AB154528.1| Cucumis melo 6F11 mRNA for hypothetical protein,... 44 0.12
46ref|NM_117463.2| Arabidopsis thaliana glycine hydroxymethyltrans... 42 0.47
47ref|XM_386466.1| Gibberella zeae PH-1 chromosome 3 GLYC_NEUCR Se... 42 0.47
48gb|BC042276.1| Xenopus laevis serine hydroxymethyltransferase 1 ... 42 0.47
49emb|AL035528.2|ATF18A5 Arabidopsis thaliana DNA chromosome 4, BA... 42 0.47
50ref|NM_001009469.1| Ovis aries cytosolic serine hydroxymethyltra... 40 1.9
51emb|X80024.1|OASERHMT O.aries mRNA for serine hydroxymethyltrans... 40 1.9
52gb|BC112563.1| Bos taurus serine hydroxymethyltransferase 1 (sol... 40 1.9
53ref|NM_001015553.1| Bos taurus serine hydroxymethyltransferase 1... 40 1.9
54gb|BT020871.1| Bos taurus serine hydroxymethyltransferase 1 (sol... 40 1.9
55emb|Z11846.1|OCCSERHMT O.cuniculus mRNA for cytosolic serine hyd... 40 1.9
56emb|AL732357.3| Mouse DNA sequence from clone RP23-383K1 on chro... 40 1.9
57ref|XM_458248.1| Debaryomyces hansenii CBS767 hypothetical prote... 38 7.3
58gb|BT013569.1| Lycopersicon esculentum clone 132307R, mRNA sequence 38 7.3
59gb|AC139759.4| Mus musculus BAC clone RP23-385E10 from chromosom... 38 7.3
60emb|AL121833.10|HSDJ131H7 Human DNA sequence from clone RP1-131H... 38 7.3
61emb|CR382135.1| Debaryomyces hansenii chromosome C of strain CBS... 38 7.3
62emb|AJ438779.1|EGO438779 Eremothecium gossypii SHM2 gene for ser... 38 7.3
63gb|AE016816.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10... 38 7.3
64ref|XM_392993.2| PREDICTED: Apis mellifera similar to ENSANGP000... 38 7.3
65dbj|AK109000.1| Oryza sativa (japonica cultivar-group) cDNA clon... 38 7.3
66ref|NM_208970.1| Eremothecium gossypii ACR215Cp (ACR215C), mRNA 38 7.3
67emb|BX296539.5| Zebrafish DNA sequence from clone DKEYP-13E2 in ... 38 7.3
68gb|AE008384.1| Methanosarcina mazei strain Goe1, complete genome 38 7.3
69gb|AC149216.5| Mus musculus BAC clone RP24-194H8 from 18, comple... 38 7.3 
>gb|AC137752.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0041C22, complete sequence
          Length = 161172

 Score =  202 bits (102), Expect = 2e-49
 Identities = 137/150 (91%)
 Strand = Plus / Plus

                                                                         
Query: 3     ctgtgatgnggttaccaccacaacacacaagtccctccgaggaccaagggctggcatgat 62
             |||||||| |||||||||||| || ||||||||||||||||||||||| |||||||||||
Sbjct: 85674 ctgtgatgtggttaccaccaccacgcacaagtccctccgaggaccaagagctggcatgat 85733

                                                                         
Query: 63    cttctacaggaaaggccctaagcctgcnaagaagggccagcctgagggtgctgtgtatga 122
             |||||||||||| |||||||||||| | |||||||||||||||||||||||||| |||||
Sbjct: 85734 cttctacaggaagggccctaagcctcccaagaagggccagcctgagggtgctgtctatga 85793

                                           
Query: 123   ctacgaggacanaatnaactttgcggtgtt 152
             |||||||||||  || ||||| || |||||
Sbjct: 85794 ctacgaggacaagatcaacttcgcagtgtt 85823
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score =  202 bits (102), Expect = 2e-49
 Identities = 137/150 (91%)
 Strand = Plus / Plus

                                                                            
Query: 3        ctgtgatgnggttaccaccacaacacacaagtccctccgaggaccaagggctggcatgat 62
                |||||||| |||||||||||| || ||||||||||||||||||||||| |||||||||||
Sbjct: 14862608 ctgtgatgtggttaccaccaccacgcacaagtccctccgaggaccaagagctggcatgat 14862667

                                                                            
Query: 63       cttctacaggaaaggccctaagcctgcnaagaagggccagcctgagggtgctgtgtatga 122
                |||||||||||| |||||||||||| | |||||||||||||||||||||||||| |||||
Sbjct: 14862668 cttctacaggaagggccctaagcctcccaagaagggccagcctgagggtgctgtctatga 14862727

                                              
Query: 123      ctacgaggacanaatnaactttgcggtgtt 152
                |||||||||||  || ||||| || |||||
Sbjct: 14862728 ctacgaggacaagatcaacttcgcagtgtt 14862757
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>dbj|AK105983.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-G03, full
           insert sequence
          Length = 1153

 Score =  202 bits (102), Expect = 2e-49
 Identities = 137/150 (91%)
 Strand = Plus / Plus

                                                                       
Query: 3   ctgtgatgnggttaccaccacaacacacaagtccctccgaggaccaagggctggcatgat 62
           |||||||| |||||||||||| || ||||||||||||||||||||||| |||||||||||
Sbjct: 148 ctgtgatgtggttaccaccaccacgcacaagtccctccgaggaccaagagctggcatgat 207

                                                                       
Query: 63  cttctacaggaaaggccctaagcctgcnaagaagggccagcctgagggtgctgtgtatga 122
           |||||||||||| |||||||||||| | |||||||||||||||||||||||||| |||||
Sbjct: 208 cttctacaggaagggccctaagcctcccaagaagggccagcctgagggtgctgtctatga 267

                                         
Query: 123 ctacgaggacanaatnaactttgcggtgtt 152
           |||||||||||  || ||||| || |||||
Sbjct: 268 ctacgaggacaagatcaacttcgcagtgtt 297
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>dbj|AK105624.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-200-C10, full
           insert sequence
          Length = 1811

 Score =  202 bits (102), Expect = 2e-49
 Identities = 137/150 (91%)
 Strand = Plus / Plus

                                                                       
Query: 3   ctgtgatgnggttaccaccacaacacacaagtccctccgaggaccaagggctggcatgat 62
           |||||||| |||||||||||| || ||||||||||||||||||||||| |||||||||||
Sbjct: 782 ctgtgatgtggttaccaccaccacgcacaagtccctccgaggaccaagagctggcatgat 841

                                                                       
Query: 63  cttctacaggaaaggccctaagcctgcnaagaagggccagcctgagggtgctgtgtatga 122
           |||||||||||| |||||||||||| | |||||||||||||||||||||||||| |||||
Sbjct: 842 cttctacaggaagggccctaagcctcccaagaagggccagcctgagggtgctgtctatga 901

                                         
Query: 123 ctacgaggacanaatnaactttgcggtgtt 152
           |||||||||||  || ||||| || |||||
Sbjct: 902 ctacgaggacaagatcaacttcgcagtgtt 931
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>dbj|AK101450.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033039N02, full
           insert sequence
          Length = 1896

 Score =  202 bits (102), Expect = 2e-49
 Identities = 137/150 (91%)
 Strand = Plus / Plus

                                                                       
Query: 3   ctgtgatgnggttaccaccacaacacacaagtccctccgaggaccaagggctggcatgat 62
           |||||||| |||||||||||| || ||||||||||||||||||||||| |||||||||||
Sbjct: 783 ctgtgatgtggttaccaccaccacgcacaagtccctccgaggaccaagagctggcatgat 842

                                                                       
Query: 63  cttctacaggaaaggccctaagcctgcnaagaagggccagcctgagggtgctgtgtatga 122
           |||||||||||| |||||||||||| | |||||||||||||||||||||||||| |||||
Sbjct: 843 cttctacaggaagggccctaagcctcccaagaagggccagcctgagggtgctgtctatga 902

                                         
Query: 123 ctacgaggacanaatnaactttgcggtgtt 152
           |||||||||||  || ||||| || |||||
Sbjct: 903 ctacgaggacaagatcaacttcgcagtgtt 932
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>dbj|AK071541.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023100I04, full
           insert sequence
          Length = 1811

 Score =  202 bits (102), Expect = 2e-49
 Identities = 137/150 (91%)
 Strand = Plus / Plus

                                                                       
Query: 3   ctgtgatgnggttaccaccacaacacacaagtccctccgaggaccaagggctggcatgat 62
           |||||||| |||||||||||| || ||||||||||||||||||||||| |||||||||||
Sbjct: 783 ctgtgatgtggttaccaccaccacgcacaagtccctccgaggaccaagagctggcatgat 842

                                                                       
Query: 63  cttctacaggaaaggccctaagcctgcnaagaagggccagcctgagggtgctgtgtatga 122
           |||||||||||| |||||||||||| | |||||||||||||||||||||||||| |||||
Sbjct: 843 cttctacaggaagggccctaagcctcccaagaagggccagcctgagggtgctgtctatga 902

                                         
Query: 123 ctacgaggacanaatnaactttgcggtgtt 152
           |||||||||||  || ||||| || |||||
Sbjct: 903 ctacgaggacaagatcaacttcgcagtgtt 932
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score =  202 bits (102), Expect = 2e-49
 Identities = 137/150 (91%)
 Strand = Plus / Plus

                                                                            
Query: 3        ctgtgatgnggttaccaccacaacacacaagtccctccgaggaccaagggctggcatgat 62
                |||||||| |||||||||||| || ||||||||||||||||||||||| |||||||||||
Sbjct: 14942575 ctgtgatgtggttaccaccaccacgcacaagtccctccgaggaccaagagctggcatgat 14942634

                                                                            
Query: 63       cttctacaggaaaggccctaagcctgcnaagaagggccagcctgagggtgctgtgtatga 122
                |||||||||||| |||||||||||| | |||||||||||||||||||||||||| |||||
Sbjct: 14942635 cttctacaggaagggccctaagcctcccaagaagggccagcctgagggtgctgtctatga 14942694

                                              
Query: 123      ctacgaggacanaatnaactttgcggtgtt 152
                |||||||||||  || ||||| || |||||
Sbjct: 14942695 ctacgaggacaagatcaacttcgcagtgtt 14942724
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>gb|AY105338.1| Zea mays PCO102700 mRNA sequence
          Length = 1951

 Score =  176 bits (89), Expect = 1e-41
 Identities = 133/149 (89%)
 Strand = Plus / Plus

                                                                        
Query: 4    tgtgatgnggttaccaccacaacacacaagtccctccgaggaccaagggctggcatgatc 63
            ||||||| ||||||||| || || |||||||||||| |||| ||||||||||||||||||
Sbjct: 911  tgtgatgtggttaccacaaccacgcacaagtccctcagagggccaagggctggcatgatc 970

                                                                        
Query: 64   ttctacaggaaaggccctaagcctgcnaagaagggccagcctgagggtgctgtgtatgac 123
            |||||||||||||||||||||||  | |||||||||||||||||||||||||| ||||| 
Sbjct: 971  ttctacaggaaaggccctaagccccccaagaagggccagcctgagggtgctgtttatgat 1030

                                         
Query: 124  tacgaggacanaatnaactttgcggtgtt 152
            ||||| ||||  || |||||||| |||||
Sbjct: 1031 tacgaagacaagatcaactttgcagtgtt 1059
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score =  117 bits (59), Expect = 1e-23
 Identities = 124/147 (84%)
 Strand = Plus / Minus

                                                                            
Query: 6        tgatgnggttaccaccacaacacacaagtccctccgaggaccaagggctggcatgatctt 65
                ||||| |||||||||||| || ||||||   |||||||| |||||  |||| ||||||||
Sbjct: 12438983 tgatgtggttaccaccaccacccacaagagtctccgagggccaagatctggtatgatctt 12438924

                                                                            
Query: 66       ctacaggaaaggccctaagcctgcnaagaagggccagcctgagggtgctgtgtatgacta 125
                ||||||||| ||||  |||||| | ||||| |||||||||||||| ||| ||||||||||
Sbjct: 12438923 ctacaggaagggcctgaagcctcccaagaaaggccagcctgagggcgctctgtatgacta 12438864

                                           
Query: 126      cgaggacanaatnaactttgcggtgtt 152
                ||||||||  || ||||| || |||||
Sbjct: 12438863 cgaggacaggatcaacttcgcagtgtt 12438837
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>dbj|AK101088.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033024L02, full
            insert sequence
          Length = 1944

 Score =  117 bits (59), Expect = 1e-23
 Identities = 124/147 (84%)
 Strand = Plus / Plus

                                                                        
Query: 6    tgatgnggttaccaccacaacacacaagtccctccgaggaccaagggctggcatgatctt 65
            ||||| |||||||||||| || ||||||   |||||||| |||||  |||| ||||||||
Sbjct: 983  tgatgtggttaccaccaccacccacaagagtctccgagggccaagatctggtatgatctt 1042

                                                                        
Query: 66   ctacaggaaaggccctaagcctgcnaagaagggccagcctgagggtgctgtgtatgacta 125
            ||||||||| ||||  |||||| | ||||| |||||||||||||| ||| ||||||||||
Sbjct: 1043 ctacaggaagggcctgaagcctcccaagaaaggccagcctgagggcgctctgtatgacta 1102

                                       
Query: 126  cgaggacanaatnaactttgcggtgtt 152
            ||||||||  || ||||| || |||||
Sbjct: 1103 cgaggacaggatcaacttcgcagtgtt 1129
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score =  117 bits (59), Expect = 1e-23
 Identities = 124/147 (84%)
 Strand = Plus / Minus

                                                                            
Query: 6        tgatgnggttaccaccacaacacacaagtccctccgaggaccaagggctggcatgatctt 65
                ||||| |||||||||||| || ||||||   |||||||| |||||  |||| ||||||||
Sbjct: 12393353 tgatgtggttaccaccaccacccacaagagtctccgagggccaagatctggtatgatctt 12393294

                                                                            
Query: 66       ctacaggaaaggccctaagcctgcnaagaagggccagcctgagggtgctgtgtatgacta 125
                ||||||||| ||||  |||||| | ||||| |||||||||||||| ||| ||||||||||
Sbjct: 12393293 ctacaggaagggcctgaagcctcccaagaaaggccagcctgagggcgctctgtatgacta 12393234

                                           
Query: 126      cgaggacanaatnaactttgcggtgtt 152
                ||||||||  || ||||| || |||||
Sbjct: 12393233 cgaggacaggatcaacttcgcagtgtt 12393207
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>emb|AL713942.4|CNS07YPB Oryza sativa chromosome 12, . BAC OSJNBa0009F05 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 163702

 Score =  117 bits (59), Expect = 1e-23
 Identities = 124/147 (84%)
 Strand = Plus / Minus

                                                                          
Query: 6      tgatgnggttaccaccacaacacacaagtccctccgaggaccaagggctggcatgatctt 65
              ||||| |||||||||||| || ||||||   |||||||| |||||  |||| ||||||||
Sbjct: 153348 tgatgtggttaccaccaccacccacaagagtctccgagggccaagatctggtatgatctt 153289

                                                                          
Query: 66     ctacaggaaaggccctaagcctgcnaagaagggccagcctgagggtgctgtgtatgacta 125
              ||||||||| ||||  |||||| | ||||| |||||||||||||| ||| ||||||||||
Sbjct: 153288 ctacaggaagggcctgaagcctcccaagaaaggccagcctgagggcgctctgtatgacta 153229

                                         
Query: 126    cgaggacanaatnaactttgcggtgtt 152
              ||||||||  || ||||| || |||||
Sbjct: 153228 cgaggacaggatcaacttcgcagtgtt 153202
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>emb|AL954826.3|CNS08CD2 Oryza sativa chromosome 12, . BAC OSJNBb0080P14 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 132241

 Score =  117 bits (59), Expect = 1e-23
 Identities = 124/147 (84%)
 Strand = Plus / Minus

                                                                         
Query: 6     tgatgnggttaccaccacaacacacaagtccctccgaggaccaagggctggcatgatctt 65
             ||||| |||||||||||| || ||||||   |||||||| |||||  |||| ||||||||
Sbjct: 40461 tgatgtggttaccaccaccacccacaagagtctccgagggccaagatctggtatgatctt 40402

                                                                         
Query: 66    ctacaggaaaggccctaagcctgcnaagaagggccagcctgagggtgctgtgtatgacta 125
             ||||||||| ||||  |||||| | ||||| |||||||||||||| ||| ||||||||||
Sbjct: 40401 ctacaggaagggcctgaagcctcccaagaaaggccagcctgagggcgctctgtatgacta 40342

                                        
Query: 126   cgaggacanaatnaactttgcggtgtt 152
             ||||||||  || ||||| || |||||
Sbjct: 40341 cgaggacaggatcaacttcgcagtgtt 40315
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>ref|XM_779683.1| PREDICTED: Strongylocentrotus purpuratus similar to serine
           hydroxymethyltransferase 2 (mitochondrial) (LOC579575),
           mRNA
          Length = 1847

 Score = 75.8 bits (38), Expect = 3e-11
 Identities = 50/54 (92%)
 Strand = Plus / Plus

                                                                 
Query: 16  accaccacaacacacaagtccctccgaggaccaagggctggcatgatcttctac 69
           ||||||||||| |||||| ||||||||||||||||| |||| ||||||||||||
Sbjct: 860 accaccacaactcacaagaccctccgaggaccaaggtctggaatgatcttctac 913
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>gb|AY224188.1| Medicago truncatula adenosylhomocysteinase (AHC1) gene, complete cds
          Length = 99431

 Score = 65.9 bits (33), Expect = 3e-08
 Identities = 53/60 (88%)
 Strand = Plus / Plus

                                                                         
Query: 49    agggctggcatgatcttctacaggaaaggccctaagcctgcnaagaagggccagcctgag 108
             |||||||| ||||||||||||||||| || ||||| ||  | ||||||||||||||||||
Sbjct: 62490 agggctggtatgatcttctacaggaagggacctaaaccacccaagaagggccagcctgag 62549
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>ref|NM_117467.2| Arabidopsis thaliana SHM4 (SERINE HYDROXYMETHYLTRANSFERASE 4);
           glycine hydroxymethyltransferase AT4G13930 (SHM4) mRNA,
           complete cds
          Length = 1810

 Score = 56.0 bits (28), Expect = 3e-05
 Identities = 82/101 (81%)
 Strand = Plus / Plus

                                                                       
Query: 46  ccaagggctggcatgatcttctacaggaaaggccctaagcctgcnaagaagggccagcct 105
           ||||||||||| ||||| ||||||||||| || || || ||  | |||||||| || || 
Sbjct: 830 ccaagggctggtatgattttctacaggaagggtccaaaaccaccaaagaagggtcaaccc 889

                                                    
Query: 106 gagggtgctgtgtatgactacgaggacanaatnaactttgc 146
           |||||||| || ||||| |  ||||||| ||| ||||||||
Sbjct: 890 gagggtgcagtctatgattttgaggacaaaatcaactttgc 930
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>gb|AY142551.1| Arabidopsis thaliana clone RAFL08-14-N15 (R11225) mRNA sequence
          Length = 3755

 Score = 56.0 bits (28), Expect = 3e-05
 Identities = 82/101 (81%)
 Strand = Plus / Plus

                                                                       
Query: 46  ccaagggctggcatgatcttctacaggaaaggccctaagcctgcnaagaagggccagcct 105
           ||||||||||| ||||| ||||||||||| || || || ||  | |||||||| || || 
Sbjct: 815 ccaagggctggtatgattttctacaggaagggtccaaaaccaccaaagaagggtcaaccc 874

                                                    
Query: 106 gagggtgctgtgtatgactacgaggacanaatnaactttgc 146
           |||||||| || ||||| |  ||||||| ||| ||||||||
Sbjct: 875 gagggtgcagtctatgattttgaggacaaaatcaactttgc 915
to top
>emb|Z97335.2|ATFCA0 Arabidopsis thaliana DNA chromosome 4, ESSA I FCA contig fragment No.
            0
          Length = 200576

 Score = 56.0 bits (28), Expect = 3e-05
 Identities = 82/101 (81%)
 Strand = Plus / Minus

                                                                        
Query: 46   ccaagggctggcatgatcttctacaggaaaggccctaagcctgcnaagaagggccagcct 105
            ||||||||||| ||||| ||||||||||| || || || ||  | |||||||| || || 
Sbjct: 6760 ccaagggctggtatgattttctacaggaagggtccaaaaccaccaaagaagggtcaaccc 6701

                                                     
Query: 106  gagggtgctgtgtatgactacgaggacanaatnaactttgc 146
            |||||||| || ||||| |  ||||||| ||| ||||||||
Sbjct: 6700 gagggtgcagtctatgattttgaggacaaaatcaactttgc 6660
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>emb|AL161537.2|ATCHRIV37 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 37
          Length = 199667

 Score = 56.0 bits (28), Expect = 3e-05
 Identities = 82/101 (81%)
 Strand = Plus / Minus

                                                                          
Query: 46     ccaagggctggcatgatcttctacaggaaaggccctaagcctgcnaagaagggccagcct 105
              ||||||||||| ||||| ||||||||||| || || || ||  | |||||||| || || 
Sbjct: 140975 ccaagggctggtatgattttctacaggaagggtccaaaaccaccaaagaagggtcaaccc 140916

                                                       
Query: 106    gagggtgctgtgtatgactacgaggacanaatnaactttgc 146
              |||||||| || ||||| |  ||||||| ||| ||||||||
Sbjct: 140915 gagggtgcagtctatgattttgaggacaaaatcaactttgc 140875



 Score = 42.1 bits (21), Expect = 0.47
 Identities = 59/72 (81%)
 Strand = Plus / Minus

                                                                          
Query: 41     gaggaccaagggctggcatgatcttctacaggaaaggccctaagcctgcnaagaagggcc 100
              |||| ||||||||||| |||||||| || || || || || || || || ||||||||||
Sbjct: 125087 gaggtccaagggctggtatgatcttttatagaaagggaccaaaaccagccaagaagggcc 125028

                          
Query: 101    agcctgagggtg 112
              | || |||||||
Sbjct: 125027 aacccgagggtg 125016
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>gb|AY093987.1| Arabidopsis thaliana AT4g13930/dl3005c mRNA, complete cds
          Length = 1416

 Score = 56.0 bits (28), Expect = 3e-05
 Identities = 82/101 (81%)
 Strand = Plus / Plus

                                                                       
Query: 46  ccaagggctggcatgatcttctacaggaaaggccctaagcctgcnaagaagggccagcct 105
           ||||||||||| ||||| ||||||||||| || || || ||  | |||||||| || || 
Sbjct: 745 ccaagggctggtatgattttctacaggaagggtccaaaaccaccaaagaagggtcaaccc 804

                                                    
Query: 106 gagggtgctgtgtatgactacgaggacanaatnaactttgc 146
           |||||||| || ||||| |  ||||||| ||| ||||||||
Sbjct: 805 gagggtgcagtctatgattttgaggacaaaatcaactttgc 845
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>gb|AF361589.1| Arabidopsis thaliana AT4g13930/dl3005c mRNA, complete cds
          Length = 1712

 Score = 56.0 bits (28), Expect = 3e-05
 Identities = 82/101 (81%)
 Strand = Plus / Plus

                                                                       
Query: 46  ccaagggctggcatgatcttctacaggaaaggccctaagcctgcnaagaagggccagcct 105
           ||||||||||| ||||| ||||||||||| || || || ||  | |||||||| || || 
Sbjct: 808 ccaagggctggtatgattttctacaggaagggtccaaaaccaccaaagaagggtcaaccc 867

                                                    
Query: 106 gagggtgctgtgtatgactacgaggacanaatnaactttgc 146
           |||||||| || ||||| |  ||||||| ||| ||||||||
Sbjct: 868 gagggtgcagtctatgattttgaggacaaaatcaactttgc 908
to top
>gb|AF324991.2|AF324991 Arabidopsis thaliana AT4g13930 (AT4g13930/dl3005c) mRNA, complete
           cds
          Length = 1716

 Score = 56.0 bits (28), Expect = 3e-05
 Identities = 82/101 (81%)
 Strand = Plus / Plus

                                                                       
Query: 46  ccaagggctggcatgatcttctacaggaaaggccctaagcctgcnaagaagggccagcct 105
           ||||||||||| ||||| ||||||||||| || || || ||  | |||||||| || || 
Sbjct: 812 ccaagggctggtatgattttctacaggaagggtccaaaaccaccaaagaagggtcaaccc 871

                                                    
Query: 106 gagggtgctgtgtatgactacgaggacanaatnaactttgc 146
           |||||||| || ||||| |  ||||||| ||| ||||||||
Sbjct: 872 gagggtgcagtctatgattttgaggacaaaatcaactttgc 912
to top
>emb|BX827403.1|CNS0A2GP Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS50ZE10 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1624

 Score = 56.0 bits (28), Expect = 3e-05
 Identities = 82/101 (81%)
 Strand = Plus / Plus

                                                                       
Query: 46  ccaagggctggcatgatcttctacaggaaaggccctaagcctgcnaagaagggccagcct 105
           ||||||||||| ||||| ||||||||||| || || || ||  | |||||||| || || 
Sbjct: 803 ccaagggctggtatgattttctacaggaagggtccaaaaccaccaaagaagggtcaaccc 862

                                                    
Query: 106 gagggtgctgtgtatgactacgaggacanaatnaactttgc 146
           |||||||| || ||||| |  ||||||| ||| ||||||||
Sbjct: 863 gagggtgcagtctatgattttgaggacaaaatcaactttgc 903
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>gb|AY086929.1| Arabidopsis thaliana clone 29662 mRNA, complete sequence
          Length = 1723

 Score = 56.0 bits (28), Expect = 3e-05
 Identities = 82/101 (81%)
 Strand = Plus / Plus

                                                                       
Query: 46  ccaagggctggcatgatcttctacaggaaaggccctaagcctgcnaagaagggccagcct 105
           ||||||||||| ||||| ||||||||||| || || || ||  | |||||||| || || 
Sbjct: 824 ccaagggctggtatgattttctacaggaagggtccaaaaccaccaaagaagggtcaaccc 883

                                                    
Query: 106 gagggtgctgtgtatgactacgaggacanaatnaactttgc 146
           |||||||| || ||||| |  ||||||| ||| ||||||||
Sbjct: 884 gagggtgcagtctatgattttgaggacaaaatcaactttgc 924
to top
>gb|BC038598.1| Homo sapiens serine hydroxymethyltransferase 1 (soluble),
           transcript variant 1, mRNA (cDNA clone MGC:46169
           IMAGE:4523709), complete cds
          Length = 2411

 Score = 52.0 bits (26), Expect = 5e-04
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                     
Query: 52  gctggcatgatcttctacaggaaagg 77
           ||||||||||||||||||||||||||
Sbjct: 858 gctggcatgatcttctacaggaaagg 883
to top
>gb|BC007979.2| Homo sapiens serine hydroxymethyltransferase 1 (soluble),
           transcript variant 1, mRNA (cDNA clone MGC:15229
           IMAGE:3687873), complete cds
          Length = 2407

 Score = 52.0 bits (26), Expect = 5e-04
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                     
Query: 52  gctggcatgatcttctacaggaaagg 77
           ||||||||||||||||||||||||||
Sbjct: 847 gctggcatgatcttctacaggaaagg 872
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>ref|NM_004169.3| Homo sapiens serine hydroxymethyltransferase 1 (soluble) (SHMT1),
            transcript variant 1, mRNA
          Length = 2540

 Score = 52.0 bits (26), Expect = 5e-04
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                      
Query: 52   gctggcatgatcttctacaggaaagg 77
            ||||||||||||||||||||||||||
Sbjct: 980  gctggcatgatcttctacaggaaagg 1005
to top
>ref|NM_148918.1| Homo sapiens serine hydroxymethyltransferase 1 (soluble) (SHMT1),
            transcript variant 2, mRNA
          Length = 2423

 Score = 52.0 bits (26), Expect = 5e-04
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                      
Query: 52   gctggcatgatcttctacaggaaagg 77
            ||||||||||||||||||||||||||
Sbjct: 980  gctggcatgatcttctacaggaaagg 1005
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>emb|Z25859.1|FPGHMT1 Flaveria pringlei mRNA for glycine hydroxymethyltransferase
          Length = 1746

 Score = 52.0 bits (26), Expect = 5e-04
 Identities = 53/62 (85%)
 Strand = Plus / Plus

                                                                       
Query: 16  accaccacaacacacaagtccctccgaggaccaagggctggcatgatcttctacaggaaa 75
           ||||||||||| |||||||| |||||||||||| | | || |||||| ||||  ||||||
Sbjct: 877 accaccacaacccacaagtcactccgaggaccacgtggtgccatgattttctttaggaaa 936

             
Query: 76  gg 77
           ||
Sbjct: 937 gg 938
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>emb|Y14487.1|HSY14487 Homo sapiens mRNA for cytosolic serine hydroxymethyltransferase,
            partial, clone pUS1214
          Length = 1586

 Score = 52.0 bits (26), Expect = 5e-04
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                      
Query: 52   gctggcatgatcttctacaggaaagg 77
            ||||||||||||||||||||||||||
Sbjct: 1335 gctggcatgatcttctacaggaaagg 1360
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>emb|Y14486.1|HSY14486 Homo sapiens mRNA for cytosolic serine hydroxymethyltransferase,
            clone pUS1206
          Length = 2661

 Score = 52.0 bits (26), Expect = 5e-04
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                      
Query: 52   gctggcatgatcttctacaggaaagg 77
            ||||||||||||||||||||||||||
Sbjct: 1112 gctggcatgatcttctacaggaaagg 1137
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>emb|CR613144.1| full-length cDNA clone CS0DK008YG18 of HeLa cells Cot 25-normalized
           of Homo sapiens (human)
          Length = 1637

 Score = 52.0 bits (26), Expect = 5e-04
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                     
Query: 52  gctggcatgatcttctacaggaaagg 77
           ||||||||||||||||||||||||||
Sbjct: 812 gctggcatgatcttctacaggaaagg 837
to top
>emb|CR594273.1| full-length cDNA clone CS0DC003YO14 of Neuroblastoma Cot
           25-normalized of Homo sapiens (human)
          Length = 1700

 Score = 52.0 bits (26), Expect = 5e-04
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                     
Query: 52  gctggcatgatcttctacaggaaagg 77
           ||||||||||||||||||||||||||
Sbjct: 956 gctggcatgatcttctacaggaaagg 981
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>emb|CR592100.1| full-length cDNA clone CS0DC026YC17 of Neuroblastoma Cot
           25-normalized of Homo sapiens (human)
          Length = 1656

 Score = 52.0 bits (26), Expect = 5e-04
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                     
Query: 52  gctggcatgatcttctacaggaaagg 77
           ||||||||||||||||||||||||||
Sbjct: 889 gctggcatgatcttctacaggaaagg 914
to top
>dbj|AK223552.1| Homo sapiens mRNA for serine hydroxymethyltransferase 1 (soluble)
           isoform 1 variant, clone: FCC126F02
          Length = 2486

 Score = 52.0 bits (26), Expect = 5e-04
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                     
Query: 52  gctggcatgatcttctacaggaaagg 77
           ||||||||||||||||||||||||||
Sbjct: 932 gctggcatgatcttctacaggaaagg 957
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>gb|AC127537.7| Homo sapiens chromosome 17, clone RP1-178F10, complete sequence
          Length = 131302

 Score = 52.0 bits (26), Expect = 5e-04
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                        
Query: 52     gctggcatgatcttctacaggaaagg 77
              ||||||||||||||||||||||||||
Sbjct: 114306 gctggcatgatcttctacaggaaagg 114281
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>emb|AL035367.5|HSF10178 Homo sapiens chromosome 17 sequence from PAC RP1-178F10 region
              D17S842-D17S953 map 17p11.2, complete sequence
          Length = 132486

 Score = 52.0 bits (26), Expect = 5e-04
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                        
Query: 52     gctggcatgatcttctacaggaaagg 77
              ||||||||||||||||||||||||||
Sbjct: 115492 gctggcatgatcttctacaggaaagg 115467
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>emb|AL353997.3|HS37N07 Homo sapiens chromosome 17 from PAC  RPCI-1 37N07 map 17p11.2 region
            D17S842-D17S953, complete sequence
          Length = 175103

 Score = 52.0 bits (26), Expect = 5e-04
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                      
Query: 52   gctggcatgatcttctacaggaaagg 77
            ||||||||||||||||||||||||||
Sbjct: 8857 gctggcatgatcttctacaggaaagg 8832
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>gb|BC022874.1| Homo sapiens serine hydroxymethyltransferase 1 (soluble), mRNA
           (cDNA clone MGC:24556 IMAGE:4108106), complete cds
          Length = 1653

 Score = 52.0 bits (26), Expect = 5e-04
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                     
Query: 52  gctggcatgatcttctacaggaaagg 77
           ||||||||||||||||||||||||||
Sbjct: 851 gctggcatgatcttctacaggaaagg 876
to top
>gb|L11931.1|HUMSHMTA Human cytosolic serine hydroxymethyltransferase (SHMT) mRNA,
           complete cds
          Length = 1669

 Score = 52.0 bits (26), Expect = 5e-04
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                     
Query: 52  gctggcatgatcttctacaggaaagg 77
           ||||||||||||||||||||||||||
Sbjct: 814 gctggcatgatcttctacaggaaagg 839
to top
>emb|Y14485.1|HSY14485 Homo sapiens mRNA for cytosolic serine hydroxymethyltransferase,
           clone pUS1217
          Length = 1867

 Score = 52.0 bits (26), Expect = 5e-04
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                     
Query: 52  gctggcatgatcttctacaggaaagg 77
           ||||||||||||||||||||||||||
Sbjct: 967 gctggcatgatcttctacaggaaagg 992
to top
>gb|L23928.1|HUMHSH Homo sapiens serine hydroxymethyltransferase mRNA, complete cds
          Length = 1599

 Score = 52.0 bits (26), Expect = 5e-04
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                     
Query: 52  gctggcatgatcttctacaggaaagg 77
           ||||||||||||||||||||||||||
Sbjct: 802 gctggcatgatcttctacaggaaagg 827
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>dbj|AP002373.3| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-212D19, complete
              sequence
          Length = 138197

 Score = 46.1 bits (23), Expect = 0.030
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 21     cacaacacacaagtccctccgag 43
              |||||||||||||||||||||||
Sbjct: 130385 cacaacacacaagtccctccgag 130363
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>emb|CR857151.1| Pongo pygmaeus mRNA; cDNA DKFZp469J1932 (from clone DKFZp469J1932)
          Length = 2432

 Score = 44.1 bits (22), Expect = 0.12
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 52  gctggcatgatcttctacaggaaagg 77
           |||||||||||||||||| |||||||
Sbjct: 877 gctggcatgatcttctaccggaaagg 902
to top
>dbj|AB154528.1| Cucumis melo 6F11 mRNA for hypothetical protein, partial cds
          Length = 963

 Score = 44.1 bits (22), Expect = 0.12
 Identities = 63/77 (81%)
 Strand = Plus / Plus

                                                                       
Query: 49  agggctggcatgatcttctacaggaaaggccctaagcctgcnaagaagggccagcctgag 108
           ||||| || ||||||||||| ||||| || || |||||  | |||||||| ||||| || 
Sbjct: 306 agggcaggtatgatcttctataggaagggtccaaagccacctaagaagggtcagcccgaa 365

                            
Query: 109 ggtgctgtgtatgacta 125
           | |||||| ||||||||
Sbjct: 366 gatgctgtttatgacta 382
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>ref|NM_117463.2| Arabidopsis thaliana glycine hydroxymethyltransferase AT4G13890
           mRNA, complete cds
          Length = 1592

 Score = 42.1 bits (21), Expect = 0.47
 Identities = 59/72 (81%)
 Strand = Plus / Plus

                                                                       
Query: 41  gaggaccaagggctggcatgatcttctacaggaaaggccctaagcctgcnaagaagggcc 100
           |||| ||||||||||| |||||||| || || || || || || || || ||||||||||
Sbjct: 745 gaggtccaagggctggtatgatcttttatagaaagggaccaaaaccagccaagaagggcc 804

                       
Query: 101 agcctgagggtg 112
           | || |||||||
Sbjct: 805 aacccgagggtg 816
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>ref|XM_386466.1| Gibberella zeae PH-1 chromosome 3 GLYC_NEUCR Serine
           hydroxymethyltransferase, cytosolic (Serine methylase)
           (Glycine hydroxymethyltransferase) (SHMT) (FG06290.1)
           partial mRNA
          Length = 1476

 Score = 42.1 bits (21), Expect = 0.47
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 13  gttaccaccacaacacacaagtccctccg 41
           ||||||||||| || ||||||||||||||
Sbjct: 760 gttaccaccaccacccacaagtccctccg 788
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>gb|BC042276.1| Xenopus laevis serine hydroxymethyltransferase 1 (soluble), mRNA
           (cDNA clone MGC:53442 IMAGE:5571917), complete cds
          Length = 1738

 Score = 42.1 bits (21), Expect = 0.47
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 53  ctggcatgatcttctacaggaaagg 77
           ||||||||||||||||| |||||||
Sbjct: 892 ctggcatgatcttctaccggaaagg 916
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>emb|AL035528.2|ATF18A5 Arabidopsis thaliana DNA chromosome 4, BAC clone F18A5 (ESSA project)
          Length = 118718

 Score = 42.1 bits (21), Expect = 0.47
 Identities = 59/72 (81%)
 Strand = Plus / Minus

                                                                          
Query: 41     gaggaccaagggctggcatgatcttctacaggaaaggccctaagcctgcnaagaagggcc 100
              |||| ||||||||||| |||||||| || || || || || || || || ||||||||||
Sbjct: 103995 gaggtccaagggctggtatgatcttttatagaaagggaccaaaaccagccaagaagggcc 103936

                          
Query: 101    agcctgagggtg 112
              | || |||||||
Sbjct: 103935 aacccgagggtg 103924
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>ref|NM_001009469.1| Ovis aries cytosolic serine hydroxymethyltransferase (SHMT), mRNA
          Length = 1482

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 55  ggcatgatcttctacaggaa 74
           ||||||||||||||||||||
Sbjct: 819 ggcatgatcttctacaggaa 838
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>emb|X80024.1|OASERHMT O.aries mRNA for serine hydroxymethyltransferase
          Length = 1482

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 55  ggcatgatcttctacaggaa 74
           ||||||||||||||||||||
Sbjct: 819 ggcatgatcttctacaggaa 838
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>gb|BC112563.1| Bos taurus serine hydroxymethyltransferase 1 (soluble), mRNA (cDNA
           clone MGC:137164 IMAGE:8024838), complete cds
          Length = 2370

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 55  ggcatgatcttctacaggaa 74
           ||||||||||||||||||||
Sbjct: 918 ggcatgatcttctacaggaa 937
to top
>ref|NM_001015553.1| Bos taurus serine hydroxymethyltransferase 1 (soluble) (SHMT1),
           mRNA
          Length = 2547

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 55  ggcatgatcttctacaggaa 74
           ||||||||||||||||||||
Sbjct: 932 ggcatgatcttctacaggaa 951
to top
>gb|BT020871.1| Bos taurus serine hydroxymethyltransferase 1 (soluble) (SHMT1),
           mRNA, complete cds
          Length = 2547

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 55  ggcatgatcttctacaggaa 74
           ||||||||||||||||||||
Sbjct: 932 ggcatgatcttctacaggaa 951
to top
>emb|Z11846.1|OCCSERHMT O.cuniculus mRNA for cytosolic serine hydroxymethyltransferase
          Length = 2261

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 50  gggctggcatgatcttctacagga 73
           |||| |||||||||||||||||||
Sbjct: 943 gggccggcatgatcttctacagga 966
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>emb|AL732357.3| Mouse DNA sequence from clone RP23-383K1 on chromosome 2, complete
             sequence
          Length = 101531

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 92    agaagggccagcctgagggtgctg 115
             ||||||||||||||| ||||||||
Sbjct: 60909 agaagggccagcctgtgggtgctg 60932
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>ref|XM_458248.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0C14113g)
           partial mRNA
          Length = 1482

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 49/59 (83%)
 Strand = Plus / Plus

                                                                      
Query: 13  gttaccaccacaacacacaagtccctccgaggaccaagggctggcatgatcttctacag 71
           ||||||||||| || ||||||||| |  |||| ||||| | || |||||| ||||||||
Sbjct: 787 gttaccaccaccactcacaagtccttgagaggtccaagaggtgccatgattttctacag 845
to top
>gb|BT013569.1| Lycopersicon esculentum clone 132307R, mRNA sequence
          Length = 1923

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                  
Query: 13  gttaccaccacaacacacaagtc 35
           |||||||||||||| ||||||||
Sbjct: 880 gttaccaccacaactcacaagtc 902
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>gb|AC139759.4| Mus musculus BAC clone RP23-385E10 from chromosome 18, complete
             sequence
          Length = 200426

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 97    ggccagcctgagggtgctg 115
             |||||||||||||||||||
Sbjct: 26004 ggccagcctgagggtgctg 26022
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>emb|AL121833.10|HSDJ131H7 Human DNA sequence from clone RP1-131H7 on chromosome 6q15-16.2
             Contains the 3' end of the GABRR2 gene for
             amma-aminobutyric acid (GABA) receptor rho 2, a tubulin
             beta poplypeptide (TUBB) pseudogene and the 3' end of the
             NCUBE1 gene for non-canonical ubiquitin conjugating enzyme
             1, complete sequence
          Length = 96523

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 97    ggccagcctgagggtgctg 115
             |||||||||||||||||||
Sbjct: 69391 ggccagcctgagggtgctg 69373
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>emb|CR382135.1| Debaryomyces hansenii chromosome C of strain CBS767 of Debaryomyces
               hansenii
          Length = 1592360

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 49/59 (83%)
 Strand = Plus / Plus

                                                                          
Query: 13      gttaccaccacaacacacaagtccctccgaggaccaagggctggcatgatcttctacag 71
               ||||||||||| || ||||||||| |  |||| ||||| | || |||||| ||||||||
Sbjct: 1159882 gttaccaccaccactcacaagtccttgagaggtccaagaggtgccatgattttctacag 1159940
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>emb|AJ438779.1|EGO438779 Eremothecium gossypii SHM2 gene for serine hydroxypmethyltransferase
          Length = 2360

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 52/63 (82%)
 Strand = Plus / Plus

                                                                        
Query: 16   accaccacaacacacaagtccctccgaggaccaagggctggcatgatcttctacaggaaa 75
            |||||||| || |||||||| ||| |||| ||| |||  | ||||||||||| ||||| |
Sbjct: 1084 accaccaccacccacaagtcgctcagaggcccacggggagccatgatcttcttcaggaga 1143

               
Query: 76   ggc 78
            |||
Sbjct: 1144 ggc 1146
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>gb|AE016816.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome III,
              complete sequence
          Length = 907057

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 52/63 (82%)
 Strand = Plus / Minus

                                                                          
Query: 16     accaccacaacacacaagtccctccgaggaccaagggctggcatgatcttctacaggaaa 75
              |||||||| || |||||||| ||| |||| ||| |||  | ||||||||||| ||||| |
Sbjct: 727550 accaccaccacccacaagtcgctcagaggcccacggggagccatgatcttcttcaggaga 727491

                 
Query: 76     ggc 78
              |||
Sbjct: 727490 ggc 727488
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>ref|XM_392993.2| PREDICTED: Apis mellifera similar to ENSANGP00000015921 (LOC409485),
            mRNA
          Length = 3392

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 18   caccacaacacacaagtcc 36
            |||||||||||||||||||
Sbjct: 1610 caccacaacacacaagtcc 1592
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>dbj|AK109000.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-153-G10, full
           insert sequence
          Length = 2504

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 43/51 (84%)
 Strand = Plus / Plus

                                                              
Query: 16  accaccacaacacacaagtccctccgaggaccaagggctggcatgatcttc 66
           ||||| || |||||||||  ||| ||||| ||| | |||||||||||||||
Sbjct: 807 accacgaccacacacaagagcctgcgaggcccacgcgctggcatgatcttc 857
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>ref|NM_208970.1| Eremothecium gossypii ACR215Cp (ACR215C), mRNA
          Length = 1410

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 52/63 (82%)
 Strand = Plus / Plus

                                                                       
Query: 16  accaccacaacacacaagtccctccgaggaccaagggctggcatgatcttctacaggaaa 75
           |||||||| || |||||||| ||| |||| ||| |||  | ||||||||||| ||||| |
Sbjct: 727 accaccaccacccacaagtcgctcagaggcccacggggagccatgatcttcttcaggaga 786

              
Query: 76  ggc 78
           |||
Sbjct: 787 ggc 789
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>emb|BX296539.5| Zebrafish DNA sequence from clone DKEYP-13E2 in linkage group 15,
              complete sequence
          Length = 135623

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 103    cctgagggtgctgtgtatg 121
              |||||||||||||||||||
Sbjct: 118047 cctgagggtgctgtgtatg 118065
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>gb|AE008384.1| Methanosarcina mazei strain Goe1, complete genome
          Length = 4096345

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 48    aagggctggcatgatcttc 66
             |||||||||||||||||||
Sbjct: 64077 aagggctggcatgatcttc 64095
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>gb|AC149216.5| Mus musculus BAC clone RP24-194H8 from 18, complete sequence
          Length = 193186

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 97   ggccagcctgagggtgctg 115
            |||||||||||||||||||
Sbjct: 3114 ggccagcctgagggtgctg 3096


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 958,394
Number of Sequences: 3902068
Number of extensions: 958394
Number of successful extensions: 55430
Number of sequences better than 10.0: 69
Number of HSP's better than 10.0 without gapping: 69
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 55311
Number of HSP's gapped (non-prelim): 119
length of query: 152
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 131
effective length of database: 17,151,101,840
effective search space: 2246794341040
effective search space used: 2246794341040
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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