| Clone Name | bags17k08 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY107163.1| Zea mays PCO109318 mRNA sequence Length = 1040 Score = 611 bits (308), Expect = e-171 Identities = 510/576 (88%), Gaps = 1/576 (0%) Strand = Plus / Plus Query: 2 cataaatgcaacatggccggcaaacctgtgatcattaccagagttgtggacagcatgatt 61 ||||||||||| ||| || |||||||||||||| || ||||||||||||||||||||| Sbjct: 71 cataaatgcaatctggagggtaaacctgtgatcatcactagagttgtggacagcatgatt 130 Query: 62 gacaatcttcgccctactcgcgcagaagcgactgatgttgcaaatgccgtcctagatgga 121 |||||||| |||||||| || ||||| || ||||||||||||||||| ||||||||||| Sbjct: 131 gacaatctacgccctacccgtgcagaggcaactgatgttgcaaatgctgtcctagatggc 190 Query: 122 actgatggtattttgcttggtgcggagacactccgagggcagtatcctgttgacgccgtg 181 |||||||| ||||||||||||||||||||||| ||||||| ||||||||||| || ||| Sbjct: 191 actgatggcattttgcttggtgcggagacacttcgagggctttatcctgttgatgcagtg 250 Query: 182 agtactgtgggcagaatatgcgcagaagctgagaccgtgtataaccagtcgcttcacttc 241 ||||||||||| |||||||| |||||||||||||| |||||||| ||| ||||||| ||| Sbjct: 251 agtactgtggggagaatatgtgcagaagctgagactgtgtataatcagccgcttcaattc 310 Query: 242 aagaaagtagtgaggcatgtaggtgaaccaatggcccatgaagaatctgtggcatcatca 301 ||||||||| || ||||||||||||| |||||| |||| || ||||||||||||||| || Sbjct: 311 aagaaagtaatgtggcatgtaggtgacccaatgccccacgaggaatctgtggcatcagca 370 Query: 302 gcggttcgttctgcaatgaaagtaaaagctgctgcgattgttgtgttcaccttctcaggg 361 |||||| |||||||||| ||||||||||||||||| |||||||||||||| ||||||||| Sbjct: 371 gcggttggttctgcaatcaaagtaaaagctgctgccattgttgtgttcacattctcaggg 430 Query: 362 agagctgccaggttagttgctaaatacaggccaccaatgccagttttagcagttgtgttc 421 |||||||| ||||||||||| || || |||||| |||||||| ||||||||||| | ||| Sbjct: 431 agagctgcgaggttagttgccaagtataggccaacaatgccaattttagcagttatcttc 490 Query: 422 ccacgcgagggctctgatccatcaaagtggcgttcttatggcacaacgcaggcgaggcaa 481 ||||| || || || |||||||||||||||||||||||||||||||| ||||| || ||| Sbjct: 491 ccacgtgaaggatccgatccatcaaagtggcgttcttatggcacaacacaggcaagacaa 550 Query: 482 tgtttttctgtgagagggtgtgtaccctttgatggggagtactgacgaggctgaaaccgg 541 ||||| | |||||| || |||||||||||||||||||||||||| ||||| ||||| || Sbjct: 551 tgtttcgcagtgaga-ggcgtgtaccctttgatggggagtactgatgaggccgaaactgg 609 Query: 542 tgggctcaccaaagaagcatacgggataaaacttgc 577 |||||| || || |||| || |||||||||||||| Sbjct: 610 tgggctaacaaaggaagagtatgggataaaacttgc 645
>dbj|AK101789.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033065I20, full insert sequence Length = 1878 Score = 607 bits (306), Expect = e-170 Identities = 505/570 (88%), Gaps = 1/570 (0%) Strand = Plus / Plus Query: 20 ggcaaacctgtgatcattaccagagttgtggacagcatgattgacaatcttcgccctact 79 ||||||||||||||||| || ||||||||||||||||||||||||||||| ||||| || Sbjct: 1026 ggcaaacctgtgatcatcactagagttgtggacagcatgattgacaatctacgcccaaca 1085 Query: 80 cgcgcagaagcgactgatgttgcaaatgccgtcctagatggaactgatggtattttgctt 139 || ||||| || ||||||||||||||||| |||||||||||||| ||||| ||||||||| Sbjct: 1086 cgtgcagaggccactgatgttgcaaatgctgtcctagatggaacggatggcattttgctt 1145 Query: 140 ggtgcggagacactccgagggcagtatcctgttgacgccgtgagtactgtgggcagaata 199 ||||||||||| | ||||| | ||||| ||||| || ||||||||||| || |||||| Sbjct: 1146 ggtgcggagactcatcgaggcccttatccagttgatgcagtgagtactgttgggagaata 1205 Query: 200 tgcgcagaagctgagaccgtgtataaccagtcgcttcacttcaagaaagtagtgaggcat 259 || |||||||||||| | ||||||||||||| | |||||||||||||| |||||| |||| Sbjct: 1206 tgtgcagaagctgagtctgtgtataaccagttggttcacttcaagaaattagtgaagcat 1265 Query: 260 gtaggtgaaccaatggcccatgaagaatctgtggcatcatcagcggttcgttctgcaatg 319 |||||||| |||||| |||||||||||||||||||||| ||||||||||| |||||||| Sbjct: 1266 gtaggtgatccaatgccccatgaagaatctgtggcatcttcagcggttcgcactgcaatg 1325 Query: 320 aaagtaaaagctgctgcgattgttgtgttcaccttctcagggagagctgccaggttagtt 379 || |||||||||||||| || ||||||||||| |||||||| |||||||||||||||||| Sbjct: 1326 aaggtaaaagctgctgcaatcgttgtgttcactttctcaggaagagctgccaggttagtt 1385 Query: 380 gctaaatacaggccaccaatgccagttttagcagttgtgttcccacgcgagggctctgat 439 || || |||| ||||||||||||||| || || ||||| |||||||| |||||||||||| Sbjct: 1386 gccaagtacaagccaccaatgccagtgttggccgttgtcttcccacgtgagggctctgat 1445 Query: 440 ccatcaaagtggcgttcttatggcacaacgcaggcgaggcaatgtttttctgtgagaggg 499 ||| |||||||||||||||| |||||||| ||||| |||||||||||| ||| ||| || Sbjct: 1446 ccaacaaagtggcgttcttacggcacaactcaggcaaggcaatgttttgctgcaaga-gg 1504 Query: 500 tgtgtaccctttgatggggagtactgacgaggctgaaaccggtgggctcaccaaagaagc 559 ||| ||||||||||||| ||||||||| ||||||||||| ||||||||||||| |||| Sbjct: 1505 tgtctaccctttgatggcgagtactgaggaggctgaaactggtgggctcaccagggaaga 1564 Query: 560 atacgggataaaacttgcactaaactatgg 589 ||||||||||||||||||| |||||||| Sbjct: 1565 gtacgggataaaacttgcacagaactatgg 1594
>dbj|AK060466.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-012-C12, full insert sequence Length = 1723 Score = 607 bits (306), Expect = e-170 Identities = 505/570 (88%), Gaps = 1/570 (0%) Strand = Plus / Plus Query: 20 ggcaaacctgtgatcattaccagagttgtggacagcatgattgacaatcttcgccctact 79 ||||||||||||||||| || ||||||||||||||||||||||||||||| ||||| || Sbjct: 777 ggcaaacctgtgatcatcactagagttgtggacagcatgattgacaatctacgcccaaca 836 Query: 80 cgcgcagaagcgactgatgttgcaaatgccgtcctagatggaactgatggtattttgctt 139 || ||||| || ||||||||||||||||| |||||||||||||| ||||| ||||||||| Sbjct: 837 cgtgcagaggccactgatgttgcaaatgctgtcctagatggaacggatggcattttgctt 896 Query: 140 ggtgcggagacactccgagggcagtatcctgttgacgccgtgagtactgtgggcagaata 199 ||||||||||| | ||||| | ||||| ||||| || ||||||||||| || |||||| Sbjct: 897 ggtgcggagactcatcgaggcccttatccagttgatgcagtgagtactgttgggagaata 956 Query: 200 tgcgcagaagctgagaccgtgtataaccagtcgcttcacttcaagaaagtagtgaggcat 259 || |||||||||||| | ||||||||||||| | |||||||||||||| |||||| |||| Sbjct: 957 tgtgcagaagctgagtctgtgtataaccagttggttcacttcaagaaattagtgaagcat 1016 Query: 260 gtaggtgaaccaatggcccatgaagaatctgtggcatcatcagcggttcgttctgcaatg 319 |||||||| |||||| |||||||||||||||||||||| ||||||||||| |||||||| Sbjct: 1017 gtaggtgatccaatgccccatgaagaatctgtggcatcttcagcggttcgcactgcaatg 1076 Query: 320 aaagtaaaagctgctgcgattgttgtgttcaccttctcagggagagctgccaggttagtt 379 || |||||||||||||| || ||||||||||| |||||||| |||||||||||||||||| Sbjct: 1077 aaggtaaaagctgctgcaatcgttgtgttcactttctcaggaagagctgccaggttagtt 1136 Query: 380 gctaaatacaggccaccaatgccagttttagcagttgtgttcccacgcgagggctctgat 439 || || |||| ||||||||||||||| || || ||||| |||||||| |||||||||||| Sbjct: 1137 gccaagtacaagccaccaatgccagtgttggccgttgtcttcccacgtgagggctctgat 1196 Query: 440 ccatcaaagtggcgttcttatggcacaacgcaggcgaggcaatgtttttctgtgagaggg 499 ||| |||||||||||||||| |||||||| ||||| |||||||||||| ||| ||| || Sbjct: 1197 ccaacaaagtggcgttcttacggcacaactcaggcaaggcaatgttttgctgcaaga-gg 1255 Query: 500 tgtgtaccctttgatggggagtactgacgaggctgaaaccggtgggctcaccaaagaagc 559 ||| ||||||||||||| ||||||||| ||||||||||| ||||||||||||| |||| Sbjct: 1256 tgtctaccctttgatggcgagtactgaggaggctgaaactggtgggctcaccagggaaga 1315 Query: 560 atacgggataaaacttgcactaaactatgg 589 ||||||||||||||||||| |||||||| Sbjct: 1316 gtacgggataaaacttgcacagaactatgg 1345
>gb|BT017023.1| Zea mays clone EK07D2312C08.c mRNA sequence Length = 540 Score = 153 bits (77), Expect = 8e-34 Identities = 150/173 (86%), Gaps = 1/173 (0%) Strand = Plus / Plus Query: 405 ttttagcagttgtgttcccacgcgagggctctgatccatcaaagtggcgttcttatggca 464 ||||||||||| | |||||||| || || || |||||||||||||||||||||||||||| Sbjct: 12 ttttagcagttatcttcccacgtgaaggatccgatccatcaaagtggcgttcttatggca 71 Query: 465 caacgcaggcgaggcaatgtttttctgtgagagggtgtgtaccctttgatggggagtact 524 |||| ||||| || |||||||| | |||||| || |||||||||||||||||||||||| Sbjct: 72 caacacaggcaagacaatgtttcgcagtgaga-ggcgtgtaccctttgatggggagtact 130 Query: 525 gacgaggctgaaaccggtgggctcaccaaagaagcatacgggataaaacttgc 577 || ||||| ||||| |||||||| || || |||| || |||||||||||||| Sbjct: 131 gatgaggccgaaactggtgggctaacaaaggaagagtatgggataaaacttgc 183
>gb|AC123517.2| Oryza sativa japonica cultivar-group chromosome 11 clone OSJNBb0074K09, complete sequence Length = 135363 Score = 129 bits (65), Expect = 1e-26 Identities = 92/101 (91%) Strand = Plus / Plus Query: 20 ggcaaacctgtgatcattaccagagttgtggacagcatgattgacaatcttcgccctact 79 ||||||||||||||||| || ||||||||||||||||||||||||||||| ||||| || Sbjct: 42129 ggcaaacctgtgatcatcactagagttgtggacagcatgattgacaatctacgcccaaca 42188 Query: 80 cgcgcagaagcgactgatgttgcaaatgccgtcctagatgg 120 || ||||| || ||||||||||||||||| ||||||||||| Sbjct: 42189 cgtgcagaggccactgatgttgcaaatgctgtcctagatgg 42229 Score = 123 bits (62), Expect = 7e-25 Identities = 89/98 (90%) Strand = Plus / Plus Query: 209 gctgagaccgtgtataaccagtcgcttcacttcaagaaagtagtgaggcatgtaggtgaa 268 |||||| | ||||||||||||| | |||||||||||||| |||||| |||||||||||| Sbjct: 42467 gctgagtctgtgtataaccagttggttcacttcaagaaattagtgaagcatgtaggtgat 42526 Query: 269 ccaatggcccatgaagaatctgtggcatcatcagcggt 306 |||||| |||||||||||||||||||||| |||||||| Sbjct: 42527 ccaatgccccatgaagaatctgtggcatcttcagcggt 42564 Score = 119 bits (60), Expect = 1e-23 Identities = 93/104 (89%) Strand = Plus / Plus Query: 370 caggttagttgctaaatacaggccaccaatgccagttttagcagttgtgttcccacgcga 429 |||||||||||| || |||| ||||||||||||||| || || ||||| |||||||| || Sbjct: 42784 caggttagttgccaagtacaagccaccaatgccagtgttggccgttgtcttcccacgtga 42843 Query: 430 gggctctgatccatcaaagtggcgttcttatggcacaacgcagg 473 ||||||||||||| |||||||||||||||| |||||||| |||| Sbjct: 42844 gggctctgatccaacaaagtggcgttcttacggcacaactcagg 42887 Score = 85.7 bits (43), Expect = 2e-13 Identities = 58/63 (92%) Strand = Plus / Plus Query: 312 ctgcaatgaaagtaaaagctgctgcgattgttgtgttcaccttctcagggagagctgcca 371 |||||||||| |||||||||||||| || ||||||||||| |||||||| |||||||||| Sbjct: 42651 ctgcaatgaaggtaaaagctgctgcaatcgttgtgttcactttctcaggaagagctgcca 42710 Query: 372 ggt 374 ||| Sbjct: 42711 ggt 42713 Score = 69.9 bits (35), Expect = 9e-09 Identities = 77/91 (84%) Strand = Plus / Plus Query: 119 ggaactgatggtattttgcttggtgcggagacactccgagggcagtatcctgttgacgcc 178 ||||| ||||| |||||||||||||||||||| | ||||| | ||||| ||||| || Sbjct: 42300 ggaacggatggcattttgcttggtgcggagactcatcgaggcccttatccagttgatgca 42359 Query: 179 gtgagtactgtgggcagaatatgcgcagaag 209 ||||||||||| || |||||||| ||||||| Sbjct: 42360 gtgagtactgttgggagaatatgtgcagaag 42390 Score = 65.9 bits (33), Expect = 1e-07 Identities = 54/61 (88%) Strand = Plus / Plus Query: 529 aggctgaaaccggtgggctcaccaaagaagcatacgggataaaacttgcactaaactatg 588 |||||||||| ||||||||||||| |||| ||||||||||||||||||| ||||||| Sbjct: 43260 aggctgaaactggtgggctcaccagggaagagtacgggataaaacttgcacagaactatg 43319 Query: 589 g 589 | Sbjct: 43320 g 43320 Score = 52.0 bits (26), Expect = 0.002 Identities = 54/62 (87%), Gaps = 1/62 (1%) Strand = Plus / Plus Query: 470 caggcgaggcaatgtttttctgtgagagggtgtgtaccctttgatggggagtactgacga 529 ||||| |||||||||||| ||| ||||| ||| ||||||||||||| ||||||||| || Sbjct: 42990 caggcaaggcaatgttttgctgcaagagg-tgtctaccctttgatggcgagtactgagga 43048 Query: 530 gg 531 || Sbjct: 43049 gg 43050
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 129 bits (65), Expect = 1e-26 Identities = 92/101 (91%) Strand = Plus / Plus Query: 20 ggcaaacctgtgatcattaccagagttgtggacagcatgattgacaatcttcgccctact 79 ||||||||||||||||| || ||||||||||||||||||||||||||||| ||||| || Sbjct: 5986046 ggcaaacctgtgatcatcactagagttgtggacagcatgattgacaatctacgcccaaca 5986105 Query: 80 cgcgcagaagcgactgatgttgcaaatgccgtcctagatgg 120 || ||||| || ||||||||||||||||| ||||||||||| Sbjct: 5986106 cgtgcagaggccactgatgttgcaaatgctgtcctagatgg 5986146 Score = 123 bits (62), Expect = 7e-25 Identities = 89/98 (90%) Strand = Plus / Plus Query: 209 gctgagaccgtgtataaccagtcgcttcacttcaagaaagtagtgaggcatgtaggtgaa 268 |||||| | ||||||||||||| | |||||||||||||| |||||| |||||||||||| Sbjct: 5986384 gctgagtctgtgtataaccagttggttcacttcaagaaattagtgaagcatgtaggtgat 5986443 Query: 269 ccaatggcccatgaagaatctgtggcatcatcagcggt 306 |||||| |||||||||||||||||||||| |||||||| Sbjct: 5986444 ccaatgccccatgaagaatctgtggcatcttcagcggt 5986481 Score = 119 bits (60), Expect = 1e-23 Identities = 93/104 (89%) Strand = Plus / Plus Query: 370 caggttagttgctaaatacaggccaccaatgccagttttagcagttgtgttcccacgcga 429 |||||||||||| || |||| ||||||||||||||| || || ||||| |||||||| || Sbjct: 5986701 caggttagttgccaagtacaagccaccaatgccagtgttggccgttgtcttcccacgtga 5986760 Query: 430 gggctctgatccatcaaagtggcgttcttatggcacaacgcagg 473 ||||||||||||| |||||||||||||||| |||||||| |||| Sbjct: 5986761 gggctctgatccaacaaagtggcgttcttacggcacaactcagg 5986804 Score = 85.7 bits (43), Expect = 2e-13 Identities = 58/63 (92%) Strand = Plus / Plus Query: 312 ctgcaatgaaagtaaaagctgctgcgattgttgtgttcaccttctcagggagagctgcca 371 |||||||||| |||||||||||||| || ||||||||||| |||||||| |||||||||| Sbjct: 5986568 ctgcaatgaaggtaaaagctgctgcaatcgttgtgttcactttctcaggaagagctgcca 5986627 Query: 372 ggt 374 ||| Sbjct: 5986628 ggt 5986630 Score = 69.9 bits (35), Expect = 9e-09 Identities = 77/91 (84%) Strand = Plus / Plus Query: 119 ggaactgatggtattttgcttggtgcggagacactccgagggcagtatcctgttgacgcc 178 ||||| ||||| |||||||||||||||||||| | ||||| | ||||| ||||| || Sbjct: 5986217 ggaacggatggcattttgcttggtgcggagactcatcgaggcccttatccagttgatgca 5986276 Query: 179 gtgagtactgtgggcagaatatgcgcagaag 209 ||||||||||| || |||||||| ||||||| Sbjct: 5986277 gtgagtactgttgggagaatatgtgcagaag 5986307 Score = 65.9 bits (33), Expect = 1e-07 Identities = 54/61 (88%) Strand = Plus / Plus Query: 529 aggctgaaaccggtgggctcaccaaagaagcatacgggataaaacttgcactaaactatg 588 |||||||||| ||||||||||||| |||| ||||||||||||||||||| ||||||| Sbjct: 5987177 aggctgaaactggtgggctcaccagggaagagtacgggataaaacttgcacagaactatg 5987236 Query: 589 g 589 | Sbjct: 5987237 g 5987237 Score = 52.0 bits (26), Expect = 0.002 Identities = 54/62 (87%), Gaps = 1/62 (1%) Strand = Plus / Plus Query: 470 caggcgaggcaatgtttttctgtgagagggtgtgtaccctttgatggggagtactgacga 529 ||||| |||||||||||| ||| ||||| ||| ||||||||||||| ||||||||| || Sbjct: 5986907 caggcaaggcaatgttttgctgcaagagg-tgtctaccctttgatggcgagtactgagga 5986965 Query: 530 gg 531 || Sbjct: 5986966 gg 5986967 Score = 42.1 bits (21), Expect = 2.1 Identities = 54/65 (83%) Strand = Plus / Minus Query: 44 gttgtggacagcatgattgacaatcttcgccctactcgcgcagaagcgactgatgttgca 103 ||||||||||| |||| |||||| || | |||||||| || || || |||||||| ||| Sbjct: 2223837 gttgtggacagtatgactgacaacctcaggcctactcgtgcggaggctactgatgtggca 2223778 Query: 104 aatgc 108 ||||| Sbjct: 2223777 aatgc 2223773
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 129 bits (65), Expect = 1e-26 Identities = 92/101 (91%) Strand = Plus / Plus Query: 20 ggcaaacctgtgatcattaccagagttgtggacagcatgattgacaatcttcgccctact 79 ||||||||||||||||| || ||||||||||||||||||||||||||||| ||||| || Sbjct: 6052523 ggcaaacctgtgatcatcactagagttgtggacagcatgattgacaatctacgcccaaca 6052582 Query: 80 cgcgcagaagcgactgatgttgcaaatgccgtcctagatgg 120 || ||||| || ||||||||||||||||| ||||||||||| Sbjct: 6052583 cgtgcagaggccactgatgttgcaaatgctgtcctagatgg 6052623 Score = 123 bits (62), Expect = 7e-25 Identities = 89/98 (90%) Strand = Plus / Plus Query: 209 gctgagaccgtgtataaccagtcgcttcacttcaagaaagtagtgaggcatgtaggtgaa 268 |||||| | ||||||||||||| | |||||||||||||| |||||| |||||||||||| Sbjct: 6052861 gctgagtctgtgtataaccagttggttcacttcaagaaattagtgaagcatgtaggtgat 6052920 Query: 269 ccaatggcccatgaagaatctgtggcatcatcagcggt 306 |||||| |||||||||||||||||||||| |||||||| Sbjct: 6052921 ccaatgccccatgaagaatctgtggcatcttcagcggt 6052958 Score = 119 bits (60), Expect = 1e-23 Identities = 93/104 (89%) Strand = Plus / Plus Query: 370 caggttagttgctaaatacaggccaccaatgccagttttagcagttgtgttcccacgcga 429 |||||||||||| || |||| ||||||||||||||| || || ||||| |||||||| || Sbjct: 6053178 caggttagttgccaagtacaagccaccaatgccagtgttggccgttgtcttcccacgtga 6053237 Query: 430 gggctctgatccatcaaagtggcgttcttatggcacaacgcagg 473 ||||||||||||| |||||||||||||||| |||||||| |||| Sbjct: 6053238 gggctctgatccaacaaagtggcgttcttacggcacaactcagg 6053281 Score = 85.7 bits (43), Expect = 2e-13 Identities = 58/63 (92%) Strand = Plus / Plus Query: 312 ctgcaatgaaagtaaaagctgctgcgattgttgtgttcaccttctcagggagagctgcca 371 |||||||||| |||||||||||||| || ||||||||||| |||||||| |||||||||| Sbjct: 6053045 ctgcaatgaaggtaaaagctgctgcaatcgttgtgttcactttctcaggaagagctgcca 6053104 Query: 372 ggt 374 ||| Sbjct: 6053105 ggt 6053107 Score = 69.9 bits (35), Expect = 9e-09 Identities = 77/91 (84%) Strand = Plus / Plus Query: 119 ggaactgatggtattttgcttggtgcggagacactccgagggcagtatcctgttgacgcc 178 ||||| ||||| |||||||||||||||||||| | ||||| | ||||| ||||| || Sbjct: 6052694 ggaacggatggcattttgcttggtgcggagactcatcgaggcccttatccagttgatgca 6052753 Query: 179 gtgagtactgtgggcagaatatgcgcagaag 209 ||||||||||| || |||||||| ||||||| Sbjct: 6052754 gtgagtactgttgggagaatatgtgcagaag 6052784 Score = 65.9 bits (33), Expect = 1e-07 Identities = 54/61 (88%) Strand = Plus / Plus Query: 529 aggctgaaaccggtgggctcaccaaagaagcatacgggataaaacttgcactaaactatg 588 |||||||||| ||||||||||||| |||| ||||||||||||||||||| ||||||| Sbjct: 6053654 aggctgaaactggtgggctcaccagggaagagtacgggataaaacttgcacagaactatg 6053713 Query: 589 g 589 | Sbjct: 6053714 g 6053714 Score = 52.0 bits (26), Expect = 0.002 Identities = 54/62 (87%), Gaps = 1/62 (1%) Strand = Plus / Plus Query: 470 caggcgaggcaatgtttttctgtgagagggtgtgtaccctttgatggggagtactgacga 529 ||||| |||||||||||| ||| ||||| ||| ||||||||||||| ||||||||| || Sbjct: 6053384 caggcaaggcaatgttttgctgcaagagg-tgtctaccctttgatggcgagtactgagga 6053442 Query: 530 gg 531 || Sbjct: 6053443 gg 6053444 Score = 42.1 bits (21), Expect = 2.1 Identities = 54/65 (83%) Strand = Plus / Minus Query: 44 gttgtggacagcatgattgacaatcttcgccctactcgcgcagaagcgactgatgttgca 103 ||||||||||| |||| |||||| || | |||||||| || || || |||||||| ||| Sbjct: 2231618 gttgtggacagtatgactgacaacctcaggcctactcgtgcggaggctactgatgtggca 2231559 Query: 104 aatgc 108 ||||| Sbjct: 2231558 aatgc 2231554
>gb|BT012845.1| Lycopersicon esculentum clone 113921R, mRNA sequence Length = 2018 Score = 69.9 bits (35), Expect = 9e-09 Identities = 80/95 (84%) Strand = Plus / Plus Query: 56 atgattgacaatcttcgccctactcgcgcagaagcgactgatgttgcaaatgccgtccta 115 |||| ||||||||| | |||||||| || ||||| || |||||||||||||| ||| | Sbjct: 1064 atgactgacaatctcaggcctactcgtgctgaagcaacagatgttgcaaatgctgtcttg 1123 Query: 116 gatggaactgatggtattttgcttggtgcggagac 150 ||||||||||||| |||| | |||||||| ||||| Sbjct: 1124 gatggaactgatgctattcttcttggtgctgagac 1158
>emb|AJ539069.1|NTA539069 Nicotiana tabacum cDNA-AFLP-fragment BT42-M1-030 Length = 282 Score = 65.9 bits (33), Expect = 1e-07 Identities = 75/89 (84%) Strand = Plus / Minus Query: 62 gacaatcttcgccctactcgcgcagaagcgactgatgttgcaaatgccgtcctagatgga 121 ||||||||| | |||||||| || ||||| || |||||||| ||||| ||| | |||||| Sbjct: 181 gacaatcttaggcctactcgtgctgaagcaacagatgttgctaatgctgtcttggatgga 122 Query: 122 actgatggtattttgcttggtgcggagac 150 ||||||| |||| | |||||||| ||||| Sbjct: 121 actgatgctattcttcttggtgctgagac 93
>gb|AY106025.1| Zea mays PCO073639 mRNA sequence Length = 2170 Score = 60.0 bits (30), Expect = 9e-06 Identities = 54/62 (87%) Strand = Plus / Plus Query: 47 gtggacagcatgattgacaatcttcgccctactcgcgcagaagcgactgatgttgcaaat 106 ||||||||||||| |||||| || | |||||||||||||| || |||||||| |||||| Sbjct: 1239 gtggacagcatgactgacaacctcagacctactcgcgcagaggcaactgatgtggcaaat 1298 Query: 107 gc 108 || Sbjct: 1299 gc 1300
>gb|AY090539.1| Deschampsia antarctica clone Dacor-1.8 pyruvate kinase-like mRNA, 3' UTR and partial cds Length = 1730 Score = 58.0 bits (29), Expect = 4e-05 Identities = 92/113 (81%) Strand = Plus / Plus Query: 44 gttgtggacagcatgattgacaatcttcgccctactcgcgcagaagcgactgatgttgca 103 ||||||||||| |||| |||||| || | |||||||| ||||| || |||||||| ||| Sbjct: 835 gttgtggacagtatgactgacaacctcaggcctactcgagcagaggcaactgatgtggca 894 Query: 104 aatgccgtcctagatggaactgatggtattttgcttggtgcggagacactccg 156 ||||| || || ||||| | ||||| ||| | |||||||| ||||| ||||| Sbjct: 895 aatgcagtactggatggtagtgatgccattctccttggtgctgagactctccg 947
>ref|NM_188095.1| Oryza sativa (japonica cultivar-group), Ozsa8527 predicted mRNA Length = 1524 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 71 cgccctactcgcgcagaagcgactgatgttgcaaatgccgtcctagatggaactga 126 ||||||||| | |||||||||||||||||||| ||||| || || ||||| ||||| Sbjct: 913 cgccctactagagcagaagcgactgatgttgccaatgcagttcttgatggcactga 968
>gb|BT018685.1| Zea mays clone EL01N0512A04.d mRNA sequence Length = 2017 Score = 56.0 bits (28), Expect = 1e-04 Identities = 94/116 (81%) Strand = Plus / Plus Query: 44 gttgtggacagcatgattgacaatcttcgccctactcgcgcagaagcgactgatgttgca 103 ||||||||||| |||| |||||| || | |||||||| || || || |||||||| ||| Sbjct: 1104 gttgtggacagtatgactgacaacctcaggcctactcgagcggaggcaactgatgtggca 1163 Query: 104 aatgccgtcctagatggaactgatggtattttgcttggtgcggagacactccgagg 159 ||||| || || ||||| | ||||| ||| | |||||||| ||||| |||||||| Sbjct: 1164 aatgcagtacttgatgggagtgatgccattctccttggtgctgagactctccgagg 1219
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Minus Query: 71 cgccctactcgcgcagaagcgactgatgttgcaaatgccgtcctagatggaactga 126 ||||||||| | |||||||||||||||||||| ||||| || || ||||| ||||| Sbjct: 9694313 cgccctactagagcagaagcgactgatgttgccaatgcagttcttgatggcactga 9694258
>dbj|AP000836.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0038F12 Length = 190014 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Minus Query: 71 cgccctactcgcgcagaagcgactgatgttgcaaatgccgtcctagatggaactga 126 ||||||||| | |||||||||||||||||||| ||||| || || ||||| ||||| Sbjct: 132316 cgccctactagagcagaagcgactgatgttgccaatgcagttcttgatggcactga 132261
>dbj|AK103465.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033129N11, full insert sequence Length = 2347 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 71 cgccctactcgcgcagaagcgactgatgttgcaaatgccgtcctagatggaactga 126 ||||||||| | |||||||||||||||||||| ||||| || || ||||| ||||| Sbjct: 1037 cgccctactagagcagaagcgactgatgttgccaatgcagttcttgatggcactga 1092
>dbj|AK103164.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033121D22, full insert sequence Length = 1979 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 71 cgccctactcgcgcagaagcgactgatgttgcaaatgccgtcctagatggaactga 126 ||||||||| | |||||||||||||||||||| ||||| || || ||||| ||||| Sbjct: 1136 cgccctactagagcagaagcgactgatgttgccaatgcagttcttgatggcactga 1191
>dbj|AK100799.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023121F22, full insert sequence Length = 1195 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 71 cgccctactcgcgcagaagcgactgatgttgcaaatgccgtcctagatggaactga 126 ||||||||| | |||||||||||||||||||| ||||| || || ||||| ||||| Sbjct: 328 cgccctactagagcagaagcgactgatgttgccaatgcagttcttgatggcactga 383
>dbj|AK059579.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-030-B01, full insert sequence Length = 1305 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 71 cgccctactcgcgcagaagcgactgatgttgcaaatgccgtcctagatggaactga 126 ||||||||| | |||||||||||||||||||| ||||| || || ||||| ||||| Sbjct: 396 cgccctactagagcagaagcgactgatgttgccaatgcagttcttgatggcactga 451
>gb|AY103673.1| Zea mays PCO073638 mRNA sequence Length = 2092 Score = 56.0 bits (28), Expect = 1e-04 Identities = 94/116 (81%) Strand = Plus / Plus Query: 44 gttgtggacagcatgattgacaatcttcgccctactcgcgcagaagcgactgatgttgca 103 ||||||||||| |||| |||||| || | |||||||| || || || |||||||| ||| Sbjct: 1196 gttgtggacagtatgactgacaacctcaggcctactcgagcggaggcaactgatgtggca 1255 Query: 104 aatgccgtcctagatggaactgatggtattttgcttggtgcggagacactccgagg 159 ||||| || || ||||| | ||||| ||| | |||||||| ||||| |||||||| Sbjct: 1256 aatgcagtacttgatgggagtgatgccattctccttggtgctgagactctccgagg 1311
>ref|NM_129214.2| Arabidopsis thaliana pyruvate kinase AT2G36580 mRNA, complete cds Length = 2187 Score = 54.0 bits (27), Expect = 6e-04 Identities = 87/107 (81%) Strand = Plus / Plus Query: 44 gttgtggacagcatgattgacaatcttcgccctactcgcgcagaagcgactgatgttgca 103 ||||| ||||| |||| |||||||| || || ||||| ||||| || ||||||||||| Sbjct: 1074 gttgtagacagtatgacagacaatctgcggccaactcgtgcagaggcaactgatgttgct 1133 Query: 104 aatgccgtcctagatggaactgatggtattttgcttggtgcggagac 150 ||||| || ||||||||| ||||| ||| | |||||||| ||||| Sbjct: 1134 aatgctgttttagatggaagtgatgcaattcttcttggtgctgagac 1180
>gb|AY069894.1| Arabidopsis thaliana At2g36580/F1O11.21 mRNA, complete cds Length = 1963 Score = 54.0 bits (27), Expect = 6e-04 Identities = 87/107 (81%) Strand = Plus / Plus Query: 44 gttgtggacagcatgattgacaatcttcgccctactcgcgcagaagcgactgatgttgca 103 ||||| ||||| |||| |||||||| || || ||||| ||||| || ||||||||||| Sbjct: 1074 gttgtagacagtatgacagacaatctgcggccaactcgtgcagaggcaactgatgttgct 1133 Query: 104 aatgccgtcctagatggaactgatggtattttgcttggtgcggagac 150 ||||| || ||||||||| ||||| ||| | |||||||| ||||| Sbjct: 1134 aatgctgttttagatggaagtgatgcaattcttcttggtgctgagac 1180
>emb|BX820123.1|CNS0A7Z8 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS76ZG12 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1841 Score = 54.0 bits (27), Expect = 6e-04 Identities = 87/107 (81%) Strand = Plus / Plus Query: 44 gttgtggacagcatgattgacaatcttcgccctactcgcgcagaagcgactgatgttgca 103 ||||| ||||| |||| |||||||| || || ||||| ||||| || ||||||||||| Sbjct: 982 gttgtagacagtatgacagacaatctgcggccaactcgtgcagaggcaactgatgttgct 1041 Query: 104 aatgccgtcctagatggaactgatggtattttgcttggtgcggagac 150 ||||| || ||||||||| ||||| ||| | |||||||| ||||| Sbjct: 1042 aatgctgttttagatggaagtgatgcaattcttcttggtgctgagac 1088
>gb|AY084900.1| Arabidopsis thaliana clone 120685 mRNA, complete sequence Length = 1937 Score = 54.0 bits (27), Expect = 6e-04 Identities = 87/107 (81%) Strand = Plus / Plus Query: 44 gttgtggacagcatgattgacaatcttcgccctactcgcgcagaagcgactgatgttgca 103 ||||| ||||| |||| |||||||| || || ||||| ||||| || ||||||||||| Sbjct: 1068 gttgtagacagtatgacagacaatctgcggccaactcgtgcagaggcaactgatgttgct 1127 Query: 104 aatgccgtcctagatggaactgatggtattttgcttggtgcggagac 150 ||||| || ||||||||| ||||| ||| | |||||||| ||||| Sbjct: 1128 aatgctgttttagatggaagtgatgcaattcttcttggtgctgagac 1174
>ref|NM_118772.1| Arabidopsis thaliana pyruvate kinase AT4G26390 mRNA, complete cds Length = 1494 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 83 gcagaagcgactgatgttgcaaatgccgtcctagatgg 120 |||||||| ||||||||||||||||| ||||| ||||| Sbjct: 898 gcagaagctactgatgttgcaaatgctgtcctcgatgg 935
>emb|AL161565.2|ATCHRIV65 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 65 Length = 198320 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 83 gcagaagcgactgatgttgcaaatgccgtcctagatgg 120 |||||||| ||||||||||||||||| ||||| ||||| Sbjct: 41000 gcagaagctactgatgttgcaaatgctgtcctcgatgg 41037
>emb|AL049171.1|ATT25K17 Arabidopsis thaliana DNA chromosome 4, BAC clone (ESSA project) Length = 89904 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 83 gcagaagcgactgatgttgcaaatgccgtcctagatgg 120 |||||||| ||||||||||||||||| ||||| ||||| Sbjct: 87932 gcagaagctactgatgttgcaaatgctgtcctcgatgg 87969
>emb|AL022223.3|ATM3E9 Arabidopsis thaliana DNA chromosome 4, P1 clone M3E9 (ESSA project) Length = 80677 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 83 gcagaagcgactgatgttgcaaatgccgtcctagatgg 120 |||||||| ||||||||||||||||| ||||| ||||| Sbjct: 65408 gcagaagctactgatgttgcaaatgctgtcctcgatgg 65371
>gb|BT017789.1| Zea mays clone EL01N0504E06.c mRNA sequence Length = 1255 Score = 48.1 bits (24), Expect = 0.034 Identities = 30/32 (93%) Strand = Plus / Plus Query: 92 actgatgttgcaaatgccgtcctagatggaac 123 |||||||||||||||||||| || |||||||| Sbjct: 285 actgatgttgcaaatgccgttcttgatggaac 316
>gb|AY623894.1| Zea mays putative pyruvate kinase mRNA, complete cds Length = 1960 Score = 48.1 bits (24), Expect = 0.034 Identities = 33/36 (91%) Strand = Plus / Plus Query: 70 tcgccctactcgcgcagaagcgactgatgttgcaaa 105 |||||||||||| |||||||| || ||||||||||| Sbjct: 1064 tcgccctactcgggcagaagcaacggatgttgcaaa 1099
>gb|AY103956.1| Zea mays PCO081262 mRNA sequence Length = 1983 Score = 48.1 bits (24), Expect = 0.034 Identities = 33/36 (91%) Strand = Plus / Plus Query: 70 tcgccctactcgcgcagaagcgactgatgttgcaaa 105 |||||||||||| |||||||| || ||||||||||| Sbjct: 1064 tcgccctactcgggcagaagcaacggatgttgcaaa 1099
>gb|BT000476.1| Arabidopsis thaliana putative pyruvate kinase (At2g36580/F1O11.21) mRNA, complete cds Length = 1584 Score = 46.1 bits (23), Expect = 0.14 Identities = 86/107 (80%) Strand = Plus / Plus Query: 44 gttgtggacagcatgattgacaatcttcgccctactcgcgcagaagcgactgatgttgca 103 ||||| ||||| |||| |||||||| || || ||||| |||| || ||||||||||| Sbjct: 943 gttgtagacagtatgacagacaatctgcggccaactcgtgcaggggcaactgatgttgct 1002 Query: 104 aatgccgtcctagatggaactgatggtattttgcttggtgcggagac 150 ||||| || ||||||||| ||||| ||| | |||||||| ||||| Sbjct: 1003 aatgctgttttagatggaagtgatgcaattcttcttggtgctgagac 1049
>gb|CP000025.1| Campylobacter jejuni RM1221, complete genome Length = 1777831 Score = 44.1 bits (22), Expect = 0.53 Identities = 31/34 (91%) Strand = Plus / Minus Query: 95 gatgttgcaaatgccgtcctagatggaactgatg 128 |||||||||||||| || ||||||||||| |||| Sbjct: 396984 gatgttgcaaatgctgttctagatggaacagatg 396951
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 2.1 Identities = 45/53 (84%) Strand = Plus / Minus Query: 74 cctactcgcgcagaagcgactgatgttgcaaatgccgtcctagatggaactga 126 ||||| || ||||| || |||||||| || ||||| ||||| ||||||||||| Sbjct: 11793554 cctacacgggcagaggctactgatgtagctaatgctgtccttgatggaactga 11793502
>gb|AC092634.3| Homo sapiens BAC clone RP11-340I6 from 7, complete sequence Length = 194142 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 344 gtgttcaccttctcagggaga 364 ||||||||||||||||||||| Sbjct: 164029 gtgttcaccttctcagggaga 164009
>gb|AC006919.6| Arabidopsis thaliana chromosome 2 clone F1O11 map g6825, complete sequence Length = 104364 Score = 42.1 bits (21), Expect = 2.1 Identities = 54/65 (83%) Strand = Plus / Plus Query: 44 gttgtggacagcatgattgacaatcttcgccctactcgcgcagaagcgactgatgttgca 103 ||||| ||||| |||| |||||||| || || ||||| ||||| || ||||||||||| Sbjct: 90299 gttgtagacagtatgacagacaatctgcggccaactcgtgcagaggcaactgatgttgct 90358 Query: 104 aatgc 108 ||||| Sbjct: 90359 aatgc 90363
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 2.1 Identities = 45/53 (84%) Strand = Plus / Minus Query: 74 cctactcgcgcagaagcgactgatgttgcaaatgccgtcctagatggaactga 126 ||||| || ||||| || |||||||| || ||||| ||||| ||||||||||| Sbjct: 11790317 cctacacgggcagaggctactgatgtagctaatgctgtccttgatggaactga 11790265
>gb|AC079790.6| Homo sapiens BAC clone RP11-484E6 from 2, complete sequence Length = 161723 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 316 aatgaaagtaaaagctgctgc 336 ||||||||||||||||||||| Sbjct: 119765 aatgaaagtaaaagctgctgc 119785
>gb|AC137070.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0035J18, from chromsome 3, complete sequence Length = 162711 Score = 42.1 bits (21), Expect = 2.1 Identities = 45/53 (84%) Strand = Plus / Plus Query: 74 cctactcgcgcagaagcgactgatgttgcaaatgccgtcctagatggaactga 126 ||||| || ||||| || |||||||| || ||||| ||||| ||||||||||| Sbjct: 117099 cctacacgggcagaggctactgatgtagctaatgctgtccttgatggaactga 117151
>dbj|AK099650.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013065F07, full insert sequence Length = 1933 Score = 42.1 bits (21), Expect = 2.1 Identities = 54/65 (83%) Strand = Plus / Plus Query: 44 gttgtggacagcatgattgacaatcttcgccctactcgcgcagaagcgactgatgttgca 103 ||||||||||| |||| |||||| || | |||||||| || || || |||||||| ||| Sbjct: 1066 gttgtggacagtatgactgacaacctcaggcctactcgtgcggaggctactgatgtggca 1125 Query: 104 aatgc 108 ||||| Sbjct: 1126 aatgc 1130
>dbj|AK061668.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-036-F07, full insert sequence Length = 1971 Score = 42.1 bits (21), Expect = 2.1 Identities = 54/65 (83%) Strand = Plus / Plus Query: 44 gttgtggacagcatgattgacaatcttcgccctactcgcgcagaagcgactgatgttgca 103 ||||||||||| |||| |||||| || | |||||||| || || || |||||||| ||| Sbjct: 1066 gttgtggacagtatgactgacaacctcaggcctactcgtgcggaggctactgatgtggca 1125 Query: 104 aatgc 108 ||||| Sbjct: 1126 aatgc 1130
>emb|BX000499.1|CNS08CDP Oryza sativa chromosome 11, . BAC OSJNBa0039D03 of library OSJNBa from chromosome 11 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 125593 Score = 42.1 bits (21), Expect = 2.1 Identities = 54/65 (83%) Strand = Plus / Minus Query: 44 gttgtggacagcatgattgacaatcttcgccctactcgcgcagaagcgactgatgttgca 103 ||||||||||| |||| |||||| || | |||||||| || || || |||||||| ||| Sbjct: 120531 gttgtggacagtatgactgacaacctcaggcctactcgtgcggaggctactgatgtggca 120472 Query: 104 aatgc 108 ||||| Sbjct: 120471 aatgc 120467
>dbj|AB025005.1| Cicer arietinum mRNA for pyruvate kinase, partial cds Length = 429 Score = 42.1 bits (21), Expect = 2.1 Identities = 69/85 (81%) Strand = Plus / Plus Query: 44 gttgtggacagcatgattgacaatcttcgccctactcgcgcagaagcgactgatgttgca 103 |||||||| ||||||| |||||| | | || ||||| || ||||| ||||||||||| Sbjct: 150 gttgtggatagcatgactgacaacttaagaccgactcgtgctgaagccactgatgttgcc 209 Query: 104 aatgccgtcctagatggaactgatg 128 ||||| || ||||||||| ||||| Sbjct: 210 aatgctgttttagatggaagtgatg 234
>gb|AC129902.1| Ciona savignyi, clone XX-4448657F20, complete sequence Length = 38410 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 216 ccgtgtataaccagtcgctt 235 |||||||||||||||||||| Sbjct: 2636 ccgtgtataaccagtcgctt 2655
>gb|AC146270.3| Pan troglodytes BAC clone RP43-30F23 from 7, complete sequence Length = 159288 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 109 cgtcctagatggaactgatg 128 |||||||||||||||||||| Sbjct: 66122 cgtcctagatggaactgatg 66103
>emb|Z68005.1|CEF59F3 Caenorhabditis elegans Cosmid F59F3, complete sequence Length = 29470 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 115 agatggaactgatggtattt 134 |||||||||||||||||||| Sbjct: 24471 agatggaactgatggtattt 24452
>gb|AC006019.2| Homo sapiens PAC clone RP5-1048B16 from 7, complete sequence Length = 124615 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 109 cgtcctagatggaactgatg 128 |||||||||||||||||||| Sbjct: 18916 cgtcctagatggaactgatg 18935
>gb|AC146788.13| Medicago truncatula clone mth2-11a6, complete sequence Length = 116349 Score = 40.1 bits (20), Expect = 8.3 Identities = 38/44 (86%) Strand = Plus / Plus Query: 77 actcgcgcagaagcgactgatgttgcaaatgccgtcctagatgg 120 ||||| || ||||| ||||||||||| ||||| || |||||||| Sbjct: 85543 actcgtgctgaagccactgatgttgccaatgctgttctagatgg 85586
>gb|AC139525.3| Medicago truncatula clone mth2-26o22, complete sequence Length = 103039 Score = 40.1 bits (20), Expect = 8.3 Identities = 38/44 (86%) Strand = Plus / Minus Query: 77 actcgcgcagaagcgactgatgttgcaaatgccgtcctagatgg 120 ||||| || ||||| ||||||||||| ||||| || |||||||| Sbjct: 34203 actcgtgctgaagccactgatgttgccaatgctgttctagatgg 34160
>emb|AL450107.11| Human DNA sequence from clone RP11-495K23 on chromosome 13 Contains the 3' end of a novel gene, complete sequence Length = 50886 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 397 aatgccagttttagcagttg 416 |||||||||||||||||||| Sbjct: 36697 aatgccagttttagcagttg 36678
>emb|BX510928.5| Zebrafish DNA sequence from clone DKEY-190G11 in linkage group 8, complete sequence Length = 197947 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 189 tgggcagaatatgcgcagaa 208 |||||||||||||||||||| Sbjct: 148389 tgggcagaatatgcgcagaa 148408
>gb|AY858969.1| Nitrosomonas sp. OZK11 pyruvate kinase (pykA) gene, complete cds Length = 1525 Score = 40.1 bits (20), Expect = 8.3 Identities = 44/52 (84%) Strand = Plus / Plus Query: 77 actcgcgcagaagcgactgatgttgcaaatgccgtcctagatggaactgatg 128 ||||||||||||| | | |||||||| ||||| || || |||||||| |||| Sbjct: 899 actcgcgcagaagtgtcggatgttgccaatgcggtgctggatggaacagatg 950
>ref|NM_077436.2| Caenorhabditis elegans F59F3.2 (collagen) mRNA, complete cds Length = 1391 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 115 agatggaactgatggtattt 134 |||||||||||||||||||| Sbjct: 420 agatggaactgatggtattt 439
>gb|AC150560.5| Mus musculus BAC clone RP23-16I14 from 15, complete sequence Length = 208801 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 485 ttttctgtgagagggtgtgt 504 |||||||||||||||||||| Sbjct: 8998 ttttctgtgagagggtgtgt 9017
>gb|U37214.1|SIU37214 Simian immunodeficiency virus isolate G023 tat, rev, and envelope glycoprotein (env) genes, partial cds Length = 444 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 539 cggtgggctcaccaaagaag 558 |||||||||||||||||||| Sbjct: 282 cggtgggctcaccaaagaag 301
>emb|BX323833.4| Pig DNA sequence from clone XX-554F3, complete sequence Length = 121483 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 348 tcaccttctcagggagagct 367 |||||||||||||||||||| Sbjct: 102874 tcaccttctcagggagagct 102893 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,215,815 Number of Sequences: 3902068 Number of extensions: 4215815 Number of successful extensions: 70588 Number of sequences better than 10.0: 56 Number of HSP's better than 10.0 without gapping: 58 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 70359 Number of HSP's gapped (non-prelim): 222 length of query: 613 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 590 effective length of database: 17,143,297,704 effective search space: 10114545645360 effective search space used: 10114545645360 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)