>MNR2_YEAST (P35724) Manganese resistance protein MNR2|
          Length = 969

 Score = 32.3 bits (72), Expect = 1.2
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = +2

Query: 278 EHYEFAIYEVQVDKPVHLPTFNGRVHSGQ 364
           EH+ F  + V +D  VH PT +G +  GQ
Sbjct: 407 EHFRFTYFRVDLDSTVHSPTISGLLQPGQ 435

>HTRA_BACSU (O34358) Probable serine protease do-like htrA (EC 3.4.21.-)|
          Length = 449

 Score = 32.0 bits (71), Expect = 1.6
 Identities = 28/135 (20%), Positives = 58/135 (42%), Gaps = 10/135 (7%)
 Frame = +2

Query: 227 VHLLDNTTTPGQLIYLQEHYEFAIYEVQVDKPVHLPTF--NGRVHSGQDVFRLGRDANLD 400
           V L D T    +L+      + A+ ++  D    +  F  +  + +G+ V  +G     D
Sbjct: 189 VSLYDGTEVTAKLVGSDSLTDLAVLQISDDHVTKVANFGDSSDLRTGETVIAIGDPLGKD 248

Query: 401 IKITHGNLAYDIPSRHERCHYMYFLRDASTLKLLHDD--------GGPIIDLEGKVVSLV 556
           +  T   +   I S  +R   M      +++ ++  D        GGP+++ +GK+V + 
Sbjct: 249 LSRT---VTQGIVSGVDRTVSMSTSAGETSINVIQTDAAINPGNSGGPLLNTDGKIVGIN 305

Query: 557 NNQINETFVPFVDIA 601
           + +I+E  V  +  A
Sbjct: 306 SMKISEDDVEGIGFA 320

>ATM_YEAST (P38110) Serine/threonine-protein kinase TEL1 (EC 2.7.11.1)|
            (DNA-damage checkpoint kinase TEL1) (Telomere length
            regulation protein 1) (ATM homolog)
          Length = 2787

 Score = 31.6 bits (70), Expect = 2.1
 Identities = 11/29 (37%), Positives = 19/29 (65%)
 Frame = +2

Query: 38   SVILLSSFLENQPLNKCCGLWFQRDDQRK 124
            + ++ S+  +N  ++K CGLWF+ DD  K
Sbjct: 2234 NTLVFSNRYDNDIIDKFCGLWFENDDNSK 2262

>TRY2_ANOGA (P35036) Trypsin-2 precursor (EC 3.4.21.4)|
          Length = 277

 Score = 31.2 bits (69), Expect = 2.7
 Identities = 40/167 (23%), Positives = 68/167 (40%), Gaps = 25/167 (14%)
 Frame = +2

Query: 134 VLTSAHLTRKKDPNQWKGQWTGEYHHNAKVIVHLLDNTTTP---GQLIYLQEHYEFAIYE 304
           VLT+AH T+  DP+    +     H     +V +L     P   G  I     Y+F++ E
Sbjct: 86  VLTAAHCTQGLDPSSLAVRLGSSEHATGGTLVGVLRTVEHPQYDGNTI----DYDFSLME 141

Query: 305 VQVD-------KPVHLPTFNGRVHSGQDVFRLG-RDANLDIKITHGNLAYDIPS-RHERC 457
           ++ +       +PV LP     V  G      G  +    ++ +    A ++P+  HE C
Sbjct: 142 LETELTFSDAVQPVELPEHEEPVEPGTMATVSGWGNTQSAVESSDFLRAANVPTVSHEDC 201

Query: 458 HYMYFLRDASTLKLL-------------HDDGGPIIDLEGKVVSLVN 559
              Y      T ++L              D GGP++  +GK+V +V+
Sbjct: 202 SDAYMWFGEITDRMLCAGYQQGGKDACQGDSGGPLV-ADGKLVGVVS 247

>NU2M_DROMA (P29867) NADH-ubiquinone oxidoreductase chain 2 (EC 1.6.5.3) (NADH|
           dehydrogenase subunit 2) (Fragment)
          Length = 274

 Score = 30.0 bits (66), Expect = 6.1
 Identities = 19/75 (25%), Positives = 31/75 (41%), Gaps = 17/75 (22%)
 Frame = -2

Query: 448 MPRWNVIGQITMC-----------------YLYIQICVSSKAENILTRMNTAIKSG*MNW 320
           +P+W VI Q+T+C                 + Y++IC S+   N              NW
Sbjct: 190 LPKWLVIQQLTLCNQYFLLLLMMMSTLITLFFYLRICYSAFMMNYFEN----------NW 239

Query: 319 FVHLNLINSKFIMLL 275
            + +N+I+S   M L
Sbjct: 240 IMKMNMISSNTNMYL 254

>YYXA_BACSU (P39668) Hypothetical serine protease yyxA (EC 3.4.21.-)|
          Length = 400

 Score = 30.0 bits (66), Expect = 6.1
 Identities = 29/142 (20%), Positives = 63/142 (44%), Gaps = 13/142 (9%)
 Frame = +2

Query: 215 AKVIVHLLDNTTTPGQLIYLQEHYEFAIYEVQVDKPVHLPTFNG--RVHSGQDVFRLGRD 388
           +++ + L D +     L+   +  + A+  V+ DK   +  F    +V SG+ V  +G  
Sbjct: 135 SQIEISLKDGSRVSADLVGSDQLMDLAVLRVKSDKIKAVADFGNSDKVKSGEPVIAIGNP 194

Query: 389 ANLDIKITHGNLAYDIPSRHERCHYMYFLRDAS---TLKLLHDD--------GGPIIDLE 535
             L+     G++   + S  ER   +    D       ++L  D        GG +++++
Sbjct: 195 LGLEFA---GSVTQGVISGTERAIPVDSNGDGQPDWNAEVLQTDAAINPGNSGGALLNMD 251

Query: 536 GKVVSLVNNQINETFVPFVDIA 601
           GKV+ + + +I E+ V  + ++
Sbjct: 252 GKVIGINSMKIAESAVEGIGLS 273

>NU2M_DROYA (P03895) NADH-ubiquinone oxidoreductase chain 2 (EC 1.6.5.3) (NADH|
           dehydrogenase subunit 2)
          Length = 341

 Score = 29.6 bits (65), Expect = 8.0
 Identities = 28/97 (28%), Positives = 42/97 (43%), Gaps = 1/97 (1%)
 Frame = -2

Query: 448 MPRWNVIGQITMCYLYIQICVSSKAENILTRMNTAIKSG*MNWFVHLNLINSKFIMLLKI 269
           +P+W VI Q+TMC  Y  +         L  M+T I       F +L +  S F  +L  
Sbjct: 257 LPKWLVIQQLTMCNQYFLL--------TLMMMSTLI-----TLFFYLRICYSAF--MLNY 301

Query: 268 DELAWCSCVVQQMNN-DLSIMMIFACPLPLPLVGILF 161
            E  W   +    NN +L ++M F     L L+ + F
Sbjct: 302 FENNWIMEMNMNSNNTNLYLIMTFFSIFGLFLISLFF 338

>ATM_CANGA (Q6FRZ9) Serine/threonine-protein kinase TEL1 (EC 2.7.11.1)|
            (DNA-damage checkpoint kinase TEL1) (Telomere length
            regulation protein 1) (ATM homolog)
          Length = 2763

 Score = 29.6 bits (65), Expect = 8.0
 Identities = 12/35 (34%), Positives = 21/35 (60%)
 Frame = +2

Query: 41   VILLSSFLENQPLNKCCGLWFQRDDQRKTALVLTS 145
            +++L++  +   L++ CGLWF+ DD       LTS
Sbjct: 2203 ILILTNNYDYDVLDRFCGLWFENDDDDDINTDLTS 2237

>PDR4_ARATH (O81016) Probable pleiotropic drug resistance protein 4|
          Length = 1420

 Score = 29.6 bits (65), Expect = 8.0
 Identities = 25/78 (32%), Positives = 37/78 (47%), Gaps = 4/78 (5%)
 Frame = +3

Query: 171  PTSGRGSGQANIIIM-LRSLFICWTT---QLHQASSSIFRSIMNLLFMRFKWTNQFIYPL 338
            PTSG  +  A I++  +R++     T    +HQ S  IF S   LLFM+      +  PL
Sbjct: 996  PTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPL 1055

Query: 339  LMAVFILVKMFSALEETQ 392
                  L+K F ++E  Q
Sbjct: 1056 GQKSCELIKYFESIEGVQ 1073

>SYH_WOLPM (P62351) Histidyl-tRNA synthetase (EC 6.1.1.21) (Histidine--tRNA|
           ligase) (HisRS)
          Length = 408

 Score = 29.6 bits (65), Expect = 8.0
 Identities = 17/36 (47%), Positives = 23/36 (63%)
 Frame = -2

Query: 166 LFTSEMSRRQNKGGFSLVIPLKPQATAFIQRLILEK 59
           + T EM    +KGG S  I L+P+ TA I RL++EK
Sbjct: 60  IITKEMYSFNDKGGKS--ITLRPEFTAAIVRLLIEK 93


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 96,477,192
Number of Sequences: 219361
Number of extensions: 2078747
Number of successful extensions: 5032
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4876
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5032
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6029593548
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)