ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags17j15
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK058471.1| Oryza sativa (japonica cultivar-group) cDNA clon... 198 1e-47
2gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 170 3e-39
3gb|AC137931.3| Oryza sativa (japonica cultivar-group) chromosome... 170 3e-39
4gb|AC118670.2| Genomic sequence for Oryza sativa, Nipponbare sta... 170 3e-39
5dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 170 3e-39
6dbj|AK067646.1| Oryza sativa (japonica cultivar-group) cDNA clon... 170 3e-39
7ref|NM_100577.3| Arabidopsis thaliana binding AT1G07030 mRNA, co... 56 1e-04
8gb|BT008723.1| Arabidopsis thaliana At1g07030 gene, complete cds 56 1e-04
9gb|AY140067.1| Arabidopsis thaliana mitochondrial carrier protei... 56 1e-04
10emb|BX814422.1|CNS0ADJU Arabidopsis thaliana Full-length cDNA Co... 56 1e-04
11emb|BX813983.1|CNS0ADIB Arabidopsis thaliana Full-length cDNA Co... 56 1e-04
12emb|BX816739.1|CNS0ADEX Arabidopsis thaliana Full-length cDNA Co... 56 1e-04
13emb|AJ007580.1|RNI7580 Ribes nigrum mRNA for mitochondrial carri... 52 0.002
14emb|AJ344241.1|TAE344241 Triticum aestivum/Thinopyrum intermediu... 44 0.51
15emb|AJ344240.1|TAE344240 Triticum aestivum/Thinopyrum intermediu... 44 0.51
16gb|AC122182.4| Mus musculus BAC clone RP23-12G9 from 1, complete... 44 0.51
17gb|AY187020.1| Hordeum vulgare subsp. vulgare phosphate transpor... 44 0.51
18gb|AY187019.1| Hordeum vulgare subsp. vulgare phosphate transpor... 44 0.51
19emb|BX571984.10| Zebrafish DNA sequence from clone DKEY-243I1 in... 44 0.51
20gb|AC134561.5| Mus musculus BAC clone RP24-111C16 from chromosom... 42 2.0
21gb|AC157805.3| Mus musculus chromosome 1, clone RP24-324B17, com... 42 2.0
22emb|Z98547.2|PFMAL3P3 Plasmodium falciparum MAL3P3, complete seq... 42 2.0
23emb|AL008970.3|PFMAL3P4 Plasmodium falciparum MAL3P4 42 2.0
24emb|AJ251789.2|LCA251789 Lactobacillus casei bacteriophage A2 co... 42 2.0
25emb|CR513789.22| Zebrafish DNA sequence from clone CH211-212J20 ... 42 2.0
26gb|AC114877.2| Homo sapiens chromosome 3 clone CTD-2270K17, comp... 42 2.0
27emb|BX640466.9| Zebrafish DNA sequence from clone CH211-138A11 i... 42 2.0
28gb|AC103922.2| Homo sapiens chromosome 3 clone RP11-226E22, comp... 42 2.0
29gb|CP000123.1| Mycoplasma capricolum subsp. capricolum ATCC 2734... 42 2.0
30emb|BX470232.17| Zebrafish DNA sequence from clone CH211-196F2 i... 42 2.0
31gb|AC138070.3| Homo sapiens chromosome 3 clone RP11-263E3, compl... 42 2.0
32emb|BX569783.4| Zebrafish DNA sequence from clone CH211-245H14 i... 42 2.0
33emb|AL954148.15| Zebrafish DNA sequence from clone CH211-212L17 ... 42 2.0
34emb|BX510372.6| Zebrafish DNA sequence from clone CH211-243J20 i... 42 2.0
35gb|AC101699.9| Mus musculus chromosome 1, clone RP23-244H18, com... 42 2.0
36gb|AC127258.4| Mus musculus BAC clone RP24-302G16 from 8, comple... 42 2.0
37gb|AC154387.2| Mus musculus BAC clone RP23-10K1 from chromosome ... 40 8.0
38ref|XM_956813.1| Neurospora crassa OR74A hypothetical protein (N... 40 8.0
39ref|XM_328983.1| Neurospora crassa OR74A hypothetical protein (N... 40 8.0
40gb|AC147231.2| Mus musculus BAC clone RP23-250I21 from chromosom... 40 8.0
41gb|AF543197.1| Hordeum vulgare subsp. vulgare phosphate transpor... 40 8.0
42ref|XM_385788.1| Gibberella zeae PH-1 chromosome 3 hypothetical ... 40 8.0
43gb|AC159816.2| Mus musculus BAC clone RP23-321A19 from chromosom... 40 8.0
44gb|AC092990.4| Homo sapiens 3 BAC RP11-418A22 (Roswell Park Canc... 40 8.0
45emb|CR628337.1| Legionella pneumophila str. Lens complete genome 40 8.0
46emb|BX842642.1| Mycoplasma mycoides subsp. mycoides SC genomic D... 40 8.0
47gb|AC162180.2| Mus musculus BAC clone RP23-126K16 from chromosom... 40 8.0
48gb|AC107918.5| Homo sapiens chromosome 8, clone RP11-481A20, com... 40 8.0
49gb|AC027287.21| Homo sapiens 12 BAC RP11-616L12 (Roswell Park Ca... 40 8.0
50gb|AC106847.3| Homo sapiens chromosome 8, clone CTD-2333A6, comp... 40 8.0
51gb|AC084114.8| Homo sapiens chromosome 8, clone RP11-1059L18, co... 40 8.0
52gb|AC016576.8| Homo sapiens chromosome 5 clone CTB-51A17, comple... 40 8.0
53gb|AC154345.2| Mus musculus BAC clone RP23-226O12 from chromosom... 40 8.0
54emb|BX323598.9| Zebrafish DNA sequence from clone CH211-196M2 in... 40 8.0
55gb|AY188394.1| Hordeum vulgare subsp. vulgare phosphate transpor... 40 8.0
56emb|BX324212.8| Zebrafish DNA sequence from clone CH211-209N20 i... 40 8.0
57dbj|BS000219.2| Pan troglodytes chromosome 22 clone:RP43-010L20,... 40 8.0
58dbj|AB011476.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 40 8.0
59dbj|AP001700.1| Homo sapiens genomic DNA, chromosome 21q, sectio... 40 8.0
60gb|AC111009.5| Mus musculus BAC clone RP23-418A13 from 9, comple... 40 8.0
61dbj|AP001607.1| Homo sapiens genomic DNA, chromosome 21, clone:K... 40 8.0 
>dbj|AK058471.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-016-B10, full
            insert sequence
          Length = 1364

 Score =  198 bits (100), Expect = 1e-47
 Identities = 202/236 (85%)
 Strand = Plus / Plus

                                                                        
Query: 30   ctcgatgttgtcaagacgcaactgcagtgccagggtgtatgcggatgtgaacgttttgct 89
            ||||| ||||||||||| || |||||||| |||||||| ||||| ||||| || ||  | 
Sbjct: 859  ctcgacgttgtcaagactcagctgcagtgtcagggtgtgtgcggctgtgagcgcttctca 918

                                                                        
Query: 90   agtagttctataggagatgtgttcagaacaattataaagcgcgatggatacgttgggctt 149
            ||||| || ||||| ||||| ||||||||||| |||||||| |||||||| | |||||||
Sbjct: 919  agtagctcaataggtgatgtattcagaacaatcataaagcgtgatggatatgctgggctt 978

                                                                        
Query: 150  atgaggggatggaagccgagaatgctattccacgcaccggcagcagccatatgctggtcc 209
            ||||| ||||||||||| |||||||| ||||||||||| ||||| || || |||||||| 
Sbjct: 979  atgagaggatggaagccaagaatgctgttccacgcacctgcagctgctatctgctggtcg 1038

                                                                    
Query: 210  acatacgaagcctcgaagtcgttcttcgaaagatttaatgagaaaaggagaaaata 265
            || ||||| ||||| |||||||||||||||||||| || |||||||| || |||||
Sbjct: 1039 acgtacgaggcctcaaagtcgttcttcgaaagattcaacgagaaaagaaggaaata 1094
to top
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  170 bits (86), Expect = 3e-39
 Identities = 176/206 (85%)
 Strand = Plus / Plus

                                                                            
Query: 60       cagggtgtatgcggatgtgaacgttttgctagtagttctataggagatgtgttcagaaca 119
                |||||||| ||||| ||||| || ||  | ||||| || ||||| ||||| |||||||||
Sbjct: 10362341 cagggtgtgtgcggctgtgagcgcttctcaagtagctcaataggtgatgtattcagaaca 10362400

                                                                            
Query: 120      attataaagcgcgatggatacgttgggcttatgaggggatggaagccgagaatgctattc 179
                || |||||||| |||||||| | |||||||||||| ||||||||||| |||||||| |||
Sbjct: 10362401 atcataaagcgtgatggatatgctgggcttatgagaggatggaagccaagaatgctgttc 10362460

                                                                            
Query: 180      cacgcaccggcagcagccatatgctggtccacatacgaagcctcgaagtcgttcttcgaa 239
                |||||||| ||||| || || |||||||| || ||||| ||||| |||||||||||||||
Sbjct: 10362461 cacgcacctgcagctgctatctgctggtcgacgtacgaggcctcaaagtcgttcttcgaa 10362520

                                          
Query: 240      agatttaatgagaaaaggagaaaata 265
                ||||| || |||||||| || |||||
Sbjct: 10362521 agattcaacgagaaaagaaggaaata 10362546
to top
>gb|AC137931.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBa0039F10, complete sequence
          Length = 139714

 Score =  170 bits (86), Expect = 3e-39
 Identities = 176/206 (85%)
 Strand = Plus / Plus

                                                                         
Query: 60    cagggtgtatgcggatgtgaacgttttgctagtagttctataggagatgtgttcagaaca 119
             |||||||| ||||| ||||| || ||  | ||||| || ||||| ||||| |||||||||
Sbjct: 18894 cagggtgtgtgcggctgtgagcgcttctcaagtagctcaataggtgatgtattcagaaca 18953

                                                                         
Query: 120   attataaagcgcgatggatacgttgggcttatgaggggatggaagccgagaatgctattc 179
             || |||||||| |||||||| | |||||||||||| ||||||||||| |||||||| |||
Sbjct: 18954 atcataaagcgtgatggatatgctgggcttatgagaggatggaagccaagaatgctgttc 19013

                                                                         
Query: 180   cacgcaccggcagcagccatatgctggtccacatacgaagcctcgaagtcgttcttcgaa 239
             |||||||| ||||| || || |||||||| || ||||| ||||| |||||||||||||||
Sbjct: 19014 cacgcacctgcagctgctatctgctggtcgacgtacgaggcctcaaagtcgttcttcgaa 19073

                                       
Query: 240   agatttaatgagaaaaggagaaaata 265
             ||||| || |||||||| || |||||
Sbjct: 19074 agattcaacgagaaaagaaggaaata 19099
to top
>gb|AC118670.2| Genomic sequence for Oryza sativa, Nipponbare stain, clone
             OSJNBb0036D03, from chromosome 3, complete sequence
          Length = 125800

 Score =  170 bits (86), Expect = 3e-39
 Identities = 176/206 (85%)
 Strand = Plus / Plus

                                                                         
Query: 60    cagggtgtatgcggatgtgaacgttttgctagtagttctataggagatgtgttcagaaca 119
             |||||||| ||||| ||||| || ||  | ||||| || ||||| ||||| |||||||||
Sbjct: 75807 cagggtgtgtgcggctgtgagcgcttctcaagtagctcaataggtgatgtattcagaaca 75866

                                                                         
Query: 120   attataaagcgcgatggatacgttgggcttatgaggggatggaagccgagaatgctattc 179
             || |||||||| |||||||| | |||||||||||| ||||||||||| |||||||| |||
Sbjct: 75867 atcataaagcgtgatggatatgctgggcttatgagaggatggaagccaagaatgctgttc 75926

                                                                         
Query: 180   cacgcaccggcagcagccatatgctggtccacatacgaagcctcgaagtcgttcttcgaa 239
             |||||||| ||||| || || |||||||| || ||||| ||||| |||||||||||||||
Sbjct: 75927 cacgcacctgcagctgctatctgctggtcgacgtacgaggcctcaaagtcgttcttcgaa 75986

                                       
Query: 240   agatttaatgagaaaaggagaaaata 265
             ||||| || |||||||| || |||||
Sbjct: 75987 agattcaacgagaaaagaaggaaata 76012
to top
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  170 bits (86), Expect = 3e-39
 Identities = 176/206 (85%)
 Strand = Plus / Plus

                                                                            
Query: 60       cagggtgtatgcggatgtgaacgttttgctagtagttctataggagatgtgttcagaaca 119
                |||||||| ||||| ||||| || ||  | ||||| || ||||| ||||| |||||||||
Sbjct: 10360442 cagggtgtgtgcggctgtgagcgcttctcaagtagctcaataggtgatgtattcagaaca 10360501

                                                                            
Query: 120      attataaagcgcgatggatacgttgggcttatgaggggatggaagccgagaatgctattc 179
                || |||||||| |||||||| | |||||||||||| ||||||||||| |||||||| |||
Sbjct: 10360502 atcataaagcgtgatggatatgctgggcttatgagaggatggaagccaagaatgctgttc 10360561

                                                                            
Query: 180      cacgcaccggcagcagccatatgctggtccacatacgaagcctcgaagtcgttcttcgaa 239
                |||||||| ||||| || || |||||||| || ||||| ||||| |||||||||||||||
Sbjct: 10360562 cacgcacctgcagctgctatctgctggtcgacgtacgaggcctcaaagtcgttcttcgaa 10360621

                                          
Query: 240      agatttaatgagaaaaggagaaaata 265
                ||||| || |||||||| || |||||
Sbjct: 10360622 agattcaacgagaaaagaaggaaata 10360647
to top
>dbj|AK067646.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013112D16, full
            insert sequence
          Length = 2890

 Score =  170 bits (86), Expect = 3e-39
 Identities = 176/206 (85%)
 Strand = Plus / Plus

                                                                        
Query: 60   cagggtgtatgcggatgtgaacgttttgctagtagttctataggagatgtgttcagaaca 119
            |||||||| ||||| ||||| || ||  | ||||| || ||||| ||||| |||||||||
Sbjct: 2323 cagggtgtgtgcggctgtgagcgcttctcaagtagctcaataggtgatgtattcagaaca 2382

                                                                        
Query: 120  attataaagcgcgatggatacgttgggcttatgaggggatggaagccgagaatgctattc 179
            || |||||||| |||||||| | |||||||||||| ||||||||||| |||||||| |||
Sbjct: 2383 atcataaagcgtgatggatatgctgggcttatgagaggatggaagccaagaatgctgttc 2442

                                                                        
Query: 180  cacgcaccggcagcagccatatgctggtccacatacgaagcctcgaagtcgttcttcgaa 239
            |||||||| ||||| || || |||||||| || ||||| ||||| |||||||||||||||
Sbjct: 2443 cacgcacctgcagctgctatctgctggtcgacgtacgaggcctcaaagtcgttcttcgaa 2502

                                      
Query: 240  agatttaatgagaaaaggagaaaata 265
            ||||| || |||||||| || |||||
Sbjct: 2503 agattcaacgagaaaagaaggaaata 2528
to top
>ref|NM_100577.3| Arabidopsis thaliana binding AT1G07030 mRNA, complete cds
          Length = 1477

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 58/68 (85%)
 Strand = Plus / Plus

                                                                        
Query: 33   gatgttgtcaagacgcaactgcagtgccagggtgtatgcggatgtgaacgttttgctagt 92
            |||||||||||||||||  |||| || |||||||| || |||||||| || ||  |||||
Sbjct: 1030 gatgttgtcaagacgcagttgcaatgtcagggtgtgtgtggatgtgaccgcttcactagt 1089

                    
Query: 93   agttctat 100
            ||||||||
Sbjct: 1090 agttctat 1097
to top
>gb|BT008723.1| Arabidopsis thaliana At1g07030 gene, complete cds
          Length = 981

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 58/68 (85%)
 Strand = Plus / Plus

                                                                       
Query: 33  gatgttgtcaagacgcaactgcagtgccagggtgtatgcggatgtgaacgttttgctagt 92
           |||||||||||||||||  |||| || |||||||| || |||||||| || ||  |||||
Sbjct: 745 gatgttgtcaagacgcagttgcaatgtcagggtgtgtgtggatgtgaccgcttcactagt 804

                   
Query: 93  agttctat 100
           ||||||||
Sbjct: 805 agttctat 812
to top
>gb|AY140067.1| Arabidopsis thaliana mitochondrial carrier protein, putative
            (At1g07030) mRNA, complete cds
          Length = 1420

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 58/68 (85%)
 Strand = Plus / Plus

                                                                        
Query: 33   gatgttgtcaagacgcaactgcagtgccagggtgtatgcggatgtgaacgttttgctagt 92
            |||||||||||||||||  |||| || |||||||| || |||||||| || ||  |||||
Sbjct: 975  gatgttgtcaagacgcagttgcaatgtcagggtgtgtgtggatgtgaccgcttcactagt 1034

                    
Query: 93   agttctat 100
            ||||||||
Sbjct: 1035 agttctat 1042
to top
>emb|BX814422.1|CNS0ADJU Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTFB73ZB06 of Flowers and buds of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 1437

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 58/68 (85%)
 Strand = Plus / Plus

                                                                        
Query: 33   gatgttgtcaagacgcaactgcagtgccagggtgtatgcggatgtgaacgttttgctagt 92
            |||||||||||||||||  |||| || |||||||| || |||||||| || ||  |||||
Sbjct: 1031 gatgttgtcaagacgcagttgcaatgtcagggtgtgtgtggatgtgaccgcttcactagt 1090

                    
Query: 93   agttctat 100
            ||||||||
Sbjct: 1091 agttctat 1098
to top
>emb|BX813983.1|CNS0ADIB Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTFB50ZG05 of Flowers and buds of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 1433

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 58/68 (85%)
 Strand = Plus / Plus

                                                                        
Query: 33   gatgttgtcaagacgcaactgcagtgccagggtgtatgcggatgtgaacgttttgctagt 92
            |||||||||||||||||  |||| || |||||||| || |||||||| || ||  |||||
Sbjct: 1014 gatgttgtcaagacgcagttgcaatgtcagggtgtgtgtggatgtgaccgcttcactagt 1073

                    
Query: 93   agttctat 100
            ||||||||
Sbjct: 1074 agttctat 1081
to top
>emb|BX816739.1|CNS0ADEX Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTPGH66ZD02 of Hormone Treated Callus of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1366

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 58/68 (85%)
 Strand = Plus / Plus

                                                                        
Query: 33   gatgttgtcaagacgcaactgcagtgccagggtgtatgcggatgtgaacgttttgctagt 92
            |||||||||||||||||  |||| || |||||||| || |||||||| || ||  |||||
Sbjct: 967  gatgttgtcaagacgcagttgcaatgtcagggtgtgtgtggatgtgaccgcttcactagt 1026

                    
Query: 93   agttctat 100
            ||||||||
Sbjct: 1027 agttctat 1034
to top
>emb|AJ007580.1|RNI7580 Ribes nigrum mRNA for mitochondrial carrier protein
          Length = 1294

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 50/58 (86%)
 Strand = Plus / Plus

                                                                     
Query: 19  taaccacaccactcgatgttgtcaagacgcaactgcagtgccagggtgtatgcggatg 76
           ||||||| ||||| ||||||||||| || ||  |||||||||| ||||| ||||||||
Sbjct: 719 taaccactccactagatgttgtcaaaactcagttgcagtgccaaggtgtttgcggatg 776
to top
>emb|AJ344241.1|TAE344241 Triticum aestivum/Thinopyrum intermedium alien addition line
          partial mRNA for inorganic phosphate transporter (pt2
          gene), clone 1
          Length = 1598

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                    
Query: 28 cactcgatgttgtcaagacgcaactg 53
          |||||||||||| |||||||||||||
Sbjct: 44 cactcgatgttgccaagacgcaactg 69
to top
>emb|AJ344240.1|TAE344240 Triticum aestivum/Thinopyrum intermedium alien addition line mRNA
           for inorganic phosphate transporter (pt2 gene)
          Length = 1843

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 28  cactcgatgttgtcaagacgcaactg 53
           |||||||||||| |||||||||||||
Sbjct: 115 cactcgatgttgccaagacgcaactg 140
to top
>gb|AC122182.4| Mus musculus BAC clone RP23-12G9 from 1, complete sequence
          Length = 197197

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 504    cagaataattttgccctagtttttca 529
              |||||||||||||||| |||||||||
Sbjct: 138634 cagaataattttgcccaagtttttca 138659
to top
>gb|AY187020.1| Hordeum vulgare subsp. vulgare phosphate transporter HvPT2 mRNA,
          complete cds
          Length = 1799

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                    
Query: 28 cactcgatgttgtcaagacgcaactg 53
          |||||||||||| |||||||||||||
Sbjct: 63 cactcgatgttgccaagacgcaactg 88
to top
>gb|AY187019.1| Hordeum vulgare subsp. vulgare phosphate transporter HvPT2 gene,
            partial cds
          Length = 2785

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 28   cactcgatgttgtcaagacgcaactg 53
            |||||||||||| |||||||||||||
Sbjct: 1290 cactcgatgttgccaagacgcaactg 1315
to top
>emb|BX571984.10| Zebrafish DNA sequence from clone DKEY-243I1 in linkage group 15,
           complete sequence
          Length = 184696

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 570 tattgataaaatgaaatgagaa 591
           ||||||||||||||||||||||
Sbjct: 369 tattgataaaatgaaatgagaa 390
to top
>gb|AC134561.5| Mus musculus BAC clone RP24-111C16 from chromosome 8, complete sequence
          Length = 179978

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 538    gagcacactgtatggccttct 558
              |||||||||||||||||||||
Sbjct: 145751 gagcacactgtatggccttct 145771
to top
>gb|AC157805.3| Mus musculus chromosome 1, clone RP24-324B17, complete sequence
          Length = 212185

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 108   gtgttcagaacaattataaag 128
             |||||||||||||||||||||
Sbjct: 32272 gtgttcagaacaattataaag 32292
to top
>emb|Z98547.2|PFMAL3P3 Plasmodium falciparum MAL3P3, complete sequence
          Length = 116696

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 242    atttaatgagaaaaggagaaa 262
              |||||||||||||||||||||
Sbjct: 116606 atttaatgagaaaaggagaaa 116586
to top
>emb|AL008970.3|PFMAL3P4 Plasmodium falciparum MAL3P4
          Length = 113880

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 242  atttaatgagaaaaggagaaa 262
            |||||||||||||||||||||
Sbjct: 1910 atttaatgagaaaaggagaaa 1890
to top
>emb|AJ251789.2|LCA251789 Lactobacillus casei bacteriophage A2 complete genome
          Length = 43411

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 431   acgttgtatttcttctctttt 451
             |||||||||||||||||||||
Sbjct: 34211 acgttgtatttcttctctttt 34191
to top
>emb|CR513789.22| Zebrafish DNA sequence from clone CH211-212J20 in linkage group 22,
              complete sequence
          Length = 193420

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 568    attattgataaaatgaaatga 588
              |||||||||||||||||||||
Sbjct: 155621 attattgataaaatgaaatga 155601
to top
>gb|AC114877.2| Homo sapiens chromosome 3 clone CTD-2270K17, complete sequence
          Length = 179246

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 535    attgagcacactgtatggcct 555
              |||||||||||||||||||||
Sbjct: 158929 attgagcacactgtatggcct 158949
to top
>emb|BX640466.9| Zebrafish DNA sequence from clone CH211-138A11 in linkage group 2,
              complete sequence
          Length = 182577

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 509    taattttgccctagtttttcaggat 533
              |||||||||||| ||||||||||||
Sbjct: 172355 taattttgcccttgtttttcaggat 172379
to top
>gb|AC103922.2| Homo sapiens chromosome 3 clone RP11-226E22, complete sequence
          Length = 164479

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 535    attgagcacactgtatggcct 555
              |||||||||||||||||||||
Sbjct: 120839 attgagcacactgtatggcct 120819
to top
>gb|CP000123.1| Mycoplasma capricolum subsp. capricolum ATCC 27343, complete genome
          Length = 1010023

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 570  tattgataaaatgaaatgaga 590
            |||||||||||||||||||||
Sbjct: 7665 tattgataaaatgaaatgaga 7685
to top
>emb|BX470232.17| Zebrafish DNA sequence from clone CH211-196F2 in linkage group 19,
             complete sequence
          Length = 194721

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 509   taattttgccctagtttttcaggat 533
             |||||||||||| ||||||||||||
Sbjct: 19509 taattttgcccttgtttttcaggat 19485
to top
>gb|AC138070.3| Homo sapiens chromosome 3 clone RP11-263E3, complete sequence
          Length = 169834

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 535   attgagcacactgtatggcct 555
             |||||||||||||||||||||
Sbjct: 12193 attgagcacactgtatggcct 12213
to top
>emb|BX569783.4| Zebrafish DNA sequence from clone CH211-245H14 in linkage group 20,
              complete sequence
          Length = 200617

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 320    gctgtggcgtgtccgtctgct 340
              |||||||||||||||||||||
Sbjct: 160189 gctgtggcgtgtccgtctgct 160209
to top
>emb|AL954148.15| Zebrafish DNA sequence from clone CH211-212L17 in linkage group 22,
             complete sequence
          Length = 201639

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 568   attattgataaaatgaaatga 588
             |||||||||||||||||||||
Sbjct: 31345 attattgataaaatgaaatga 31365
to top
>emb|BX510372.6| Zebrafish DNA sequence from clone CH211-243J20 in linkage group 20,
             complete sequence
          Length = 134837

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 320   gctgtggcgtgtccgtctgct 340
             |||||||||||||||||||||
Sbjct: 51102 gctgtggcgtgtccgtctgct 51122
to top
>gb|AC101699.9| Mus musculus chromosome 1, clone RP23-244H18, complete sequence
          Length = 173113

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 108    gtgttcagaacaattataaag 128
              |||||||||||||||||||||
Sbjct: 149872 gtgttcagaacaattataaag 149892
to top
>gb|AC127258.4| Mus musculus BAC clone RP24-302G16 from 8, complete sequence
          Length = 163028

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 538    gagcacactgtatggccttct 558
              |||||||||||||||||||||
Sbjct: 161928 gagcacactgtatggccttct 161908
to top
>gb|AC154387.2| Mus musculus BAC clone RP23-10K1 from chromosome 16, complete sequence
          Length = 212628

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 150   atgaggggatggaagccgag 169
             ||||||||||||||||||||
Sbjct: 40926 atgaggggatggaagccgag 40907
to top
>ref|XM_956813.1| Neurospora crassa OR74A hypothetical protein (NCU08278.1) partial
           mRNA
          Length = 1296

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 27  ccactcgatgttgtcaagac 46
           ||||||||||||||||||||
Sbjct: 883 ccactcgatgttgtcaagac 902
to top
>ref|XM_328983.1| Neurospora crassa OR74A hypothetical protein (NCU08278.1) partial
           mRNA
          Length = 1296

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 27  ccactcgatgttgtcaagac 46
           ||||||||||||||||||||
Sbjct: 883 ccactcgatgttgtcaagac 902
to top
>gb|AC147231.2| Mus musculus BAC clone RP23-250I21 from chromosome 9, complete sequence
          Length = 215395

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 569   ttattgataaaatgaaatga 588
             ||||||||||||||||||||
Sbjct: 96200 ttattgataaaatgaaatga 96181
to top
>gb|AF543197.1| Hordeum vulgare subsp. vulgare phosphate transporter 1 (Pht1-1) gene,
            complete cds
          Length = 3202

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 30   ctcgatgttgtcaagacgcaactg 53
            |||||||||| |||||||||||||
Sbjct: 1434 ctcgatgttgccaagacgcaactg 1457
to top
>ref|XM_385788.1| Gibberella zeae PH-1 chromosome 3 hypothetical protein (FG05612.1)
           partial mRNA
          Length = 951

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 21  accacaccactcgatgttgtcaagacgc 48
           |||||||||  |||||||||||||||||
Sbjct: 646 accacaccaagcgatgttgtcaagacgc 673
to top
>gb|AC159816.2| Mus musculus BAC clone RP23-321A19 from chromosome 9, complete sequence
          Length = 191274

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 275   tttcttggaagtgattgtgt 294
             ||||||||||||||||||||
Sbjct: 50364 tttcttggaagtgattgtgt 50383
to top
>gb|AC092990.4| Homo sapiens 3 BAC RP11-418A22 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 63610

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 461   tatatgtatcatttttccag 480
             ||||||||||||||||||||
Sbjct: 31322 tatatgtatcatttttccag 31341
to top
>emb|CR628337.1| Legionella pneumophila str. Lens complete genome
          Length = 3345687

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 497     caaataccagaataattttg 516
               ||||||||||||||||||||
Sbjct: 2089266 caaataccagaataattttg 2089247
to top
>emb|BX842642.1| Mycoplasma mycoides subsp. mycoides SC genomic DNA, complete sequence;
              segment 1/4
          Length = 347558

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 520    tagtttttcaggatcattga 539
              ||||||||||||||||||||
Sbjct: 106825 tagtttttcaggatcattga 106844
to top
>gb|AC162180.2| Mus musculus BAC clone RP23-126K16 from chromosome 9, complete sequence
          Length = 226160

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 275    tttcttggaagtgattgtgt 294
              ||||||||||||||||||||
Sbjct: 212337 tttcttggaagtgattgtgt 212356
to top
>gb|AC107918.5| Homo sapiens chromosome 8, clone RP11-481A20, complete sequence
          Length = 150507

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 434    ttgtatttcttctctttttg 453
              ||||||||||||||||||||
Sbjct: 110805 ttgtatttcttctctttttg 110786
to top
>gb|AC027287.21| Homo sapiens 12 BAC RP11-616L12 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 202703

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 546    tgtatggccttctttgtgtc 565
              ||||||||||||||||||||
Sbjct: 100101 tgtatggccttctttgtgtc 100120
to top
>gb|AC106847.3| Homo sapiens chromosome 8, clone CTD-2333A6, complete sequence
          Length = 135431

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 434   ttgtatttcttctctttttg 453
             ||||||||||||||||||||
Sbjct: 40217 ttgtatttcttctctttttg 40236
to top
>gb|AC084114.8| Homo sapiens chromosome 8, clone RP11-1059L18, complete sequence
          Length = 189127

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 307    caagtacttccatgctgtgg 326
              ||||||||||||||||||||
Sbjct: 131265 caagtacttccatgctgtgg 131284
to top
>gb|AC016576.8| Homo sapiens chromosome 5 clone CTB-51A17, complete sequence
          Length = 202302

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 237    gaaagatttaatgagaaaag 256
              ||||||||||||||||||||
Sbjct: 159279 gaaagatttaatgagaaaag 159298
to top
>gb|AC154345.2| Mus musculus BAC clone RP23-226O12 from chromosome 16, complete
             sequence
          Length = 169390

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 572   ttgataaaatgaaatgagaa 591
             ||||||||||||||||||||
Sbjct: 93927 ttgataaaatgaaatgagaa 93908
to top
>emb|BX323598.9| Zebrafish DNA sequence from clone CH211-196M2 in linkage group 18,
              complete sequence
          Length = 197329

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 235    tcgaaagatttaatgagaaa 254
              ||||||||||||||||||||
Sbjct: 182127 tcgaaagatttaatgagaaa 182146
to top
>gb|AY188394.1| Hordeum vulgare subsp. vulgare phosphate transporter PT1
          (HORvu;Pht1;1) mRNA, complete cds
          Length = 1833

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 30 ctcgatgttgtcaagacgcaactg 53
          |||||||||| |||||||||||||
Sbjct: 65 ctcgatgttgccaagacgcaactg 88
to top
>emb|BX324212.8| Zebrafish DNA sequence from clone CH211-209N20 in linkage group 4,
              complete sequence
          Length = 212125

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 450    tttggctgagttatatgtat 469
              ||||||||||||||||||||
Sbjct: 155985 tttggctgagttatatgtat 156004
to top
>dbj|BS000219.2| Pan troglodytes chromosome 22 clone:RP43-010L20, map 22, complete
             sequences
          Length = 62227

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 491   ggatagcaaataccagaataattt 514
             |||||||||||| |||||||||||
Sbjct: 49958 ggatagcaaatagcagaataattt 49981
to top
>dbj|AB011476.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MDA7
          Length = 82033

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 434   ttgtatttcttctctttttg 453
             ||||||||||||||||||||
Sbjct: 38828 ttgtatttcttctctttttg 38847
to top
>dbj|AP001700.1| Homo sapiens genomic DNA, chromosome 21q, section 44/105
          Length = 340000

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 491   ggatagcaaataccagaataattt 514
             |||||||||||| |||||||||||
Sbjct: 15421 ggatagcaaatagcagaataattt 15444
to top
>gb|AC111009.5| Mus musculus BAC clone RP23-418A13 from 9, complete sequence
          Length = 194287

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 569   ttattgataaaatgaaatga 588
             ||||||||||||||||||||
Sbjct: 30572 ttattgataaaatgaaatga 30553
to top
>dbj|AP001607.1| Homo sapiens genomic DNA, chromosome 21, clone:KB851D4, APP-D21S292
             region, complete sequence
          Length = 137676

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 491   ggatagcaaataccagaataattt 514
             |||||||||||| |||||||||||
Sbjct: 48741 ggatagcaaatagcagaataattt 48764


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,716,765
Number of Sequences: 3902068
Number of extensions: 5716765
Number of successful extensions: 139272
Number of sequences better than 10.0: 61
Number of HSP's better than 10.0 without gapping: 61
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 138996
Number of HSP's gapped (non-prelim): 276
length of query: 591
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 568
effective length of database: 17,143,297,704
effective search space: 9737393095872
effective search space used: 9737393095872
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top