Clone Information

BLAST Search Result

Clone Name	bags17i23
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	dbj\|AK120378.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	349	7e-93
2	dbj\|AP008212.1\| Oryza sativa (japonica cultivar-group) genomic D...	182	9e-43
3	dbj\|AP006164.2\| Oryza sativa (japonica cultivar-group) genomic D...	182	9e-43
4	gb\|DP000009.1\| Oryza sativa (japonica cultivar-group) chromosome 3	167	5e-38
5	gb\|AC105364.2\| Oryza sativa (japonica cultivar-group) chromosome...	167	5e-38
6	dbj\|AP008209.1\| Oryza sativa (japonica cultivar-group) genomic D...	167	5e-38
7	ref\|NM_187699.1\| Oryza sativa (japonica cultivar-group), predic...	105	2e-19
8	ref\|NM_172880.1\| Mus musculus transmembrane protease, serine 11e...	44	0.55
9	gb\|AC102016.4\| Mus musculus chromosome 5, clone RP24-567O8, comp...	44	0.55
10	dbj\|AK162701.1\| Mus musculus adult female vagina cDNA, RIKEN ful...	44	0.55
11	dbj\|AK037235.1\| Mus musculus 6 days neonate skin cDNA, RIKEN ful...	44	0.55
12	emb\|AL844583.6\| Mouse DNA sequence from clone RP23-240F13 on chr...	44	0.55
13	ref\|NM_101354.2\| Arabidopsis thaliana NUP155 AT1G14850 (NUP155) ...	42	2.2
14	gb\|AE017341.1\| Cryptococcus neoformans var. neoformans JEC21 chr...	40	8.5
15	gb\|AC005591.1\| Homo sapiens chromosome 16, P1 clone 94-10H (LANL...	40	8.5
16	gb\|AC113311.9\| Mus musculus chromosome 1, clone RP23-440J24, com...	40	8.5
17	ref\|XM_992873.1\| PREDICTED: Mus musculus centrosomal protein 170...	40	8.5
18	ref\|XM_989619.1\| PREDICTED: Mus musculus centrosomal protein 170...	40	8.5
19	ref\|XM_748412.1\| Aspergillus fumigatus Af293 hypothetical protei...	40	8.5
20	gb\|AC141586.2\| Homo sapiens chromosome 16 clone CTD-3126B10, com...	40	8.5
21	gb\|AC129217.3\| Mus musculus BAC clone RP24-458M20 from chromosom...	40	8.5
22	gb\|AC140104.22\| Medicago truncatula clone mth2-10g22, complete s...	40	8.5
23	gb\|CP000300.1\| Methanococcoides burtonii DSM 6242, complete genome	40	8.5
24	gb\|AC073153.16\| Mus musculus Strain C57BL6/J chromosome 19 BAC, ...	40	8.5
25	gb\|AC144905.10\| Mus musculus chromosome 1, clone RP23-293I7, com...	40	8.5
26	emb\|CR753899.5\| Zebrafish DNA sequence from clone DKEY-267F18 in...	40	8.5
27	gb\|AC142395.41\| Medicago truncatula clone mth2-18g1, complete se...	40	8.5
28	emb\|BX897688.7\| Zebrafish DNA sequence from clone DKEY-127J5, co...	40	8.5
29	emb\|BX950870.7\| Zebrafish DNA sequence from clone DKEY-242M17 in...	40	8.5
30	gb\|AC083868.3\| Homo sapiens chromosome 7 clone RP11-148L5, compl...	40	8.5
31	gb\|BC054781.1\| Mus musculus centrosomal protein 170, transcript ...	40	8.5
32	gb\|BC057019.1\| Mus musculus centrosomal protein 170, transcript ...	40	8.5
33	gb\|AC004955.3\| Homo sapiens PAC clone RP5-1087M19 from 7, comple...	40	8.5
34	emb\|BX571667.5\| Zebrafish DNA sequence from clone DKEY-267K7 in ...	40	8.5
35	gb\|AC147213.3\| Pan troglodytes BAC clone RP43-127I22 from chromo...	40	8.5
36	gb\|AC139705.4\| Homo sapiens X BAC RP11-102M2 (Roswell Park Cance...	40	8.5
37	gb\|AC008050.6\|AC008050 Homo sapiens chromosome 14 clone RP11-141...	40	8.5
38	gb\|AC007376.9\|AC007376 Homo sapiens chromosome 14 clone 99E15 co...	40	8.5
39	gb\|AC093525.3\| Homo sapiens chromosome 16 clone RP11-20I23, comp...	40	8.5
40	emb\|BX005226.10\| Zebrafish DNA sequence from clone CH211-175P12 ...	40	8.5
41	emb\|BX005271.9\| Zebrafish DNA sequence from clone CH211-145F15 i...	40	8.5
42	emb\|AJ336630.1\|HSA336630 Homo sapiens genomic sequence surroundi...	40	8.5
43	emb\|BX004766.9\| Zebrafish DNA sequence from clone DKEY-5P1 in li...	40	8.5
44	emb\|AL121992.24\|HSDJ680D5 Human DNA sequence from clone RP4-680D...	40	8.5
45	gb\|AC147236.3\| Mus musculus BAC clone RP23-357C20 from 1, comple...	40	8.5
46	dbj\|AP004911.1\| Lotus japonicus genomic DNA, chromosome 4, clone...	40	8.5

>dbj|AK120378.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013072A10, full
            insert sequence
          Length = 4831

 Score =  349 bits (176), Expect = 7e-93
 Identities = 344/400 (86%)
 Strand = Plus / Plus

                                                                        
Query: 20   tgatttaggtgcacctatttctactagccaaacgaagtatcttgagctcctagcaaggta 79
            |||||| | |||||||||||| ||||| ||||| |||||||||||||| ||||| |||||
Sbjct: 3574 tgatttggatgcacctatttcaactagtcaaaccaagtatcttgagctgctagccaggta 3633

                                                                        
Query: 80   ctatgttctcaagggggagcatgttgctgctgccaggatgttattgatattggcggaaag 139
             ||||||||||||||||||||| |||||||||| || ||||| ||||||||||| |||||
Sbjct: 3634 ttatgttctcaagggggagcatattgctgctgctagaatgttgttgatattggcagaaag 3693

                                                                        
Query: 140  gcagtgctctaatgccgaagaagctcctgctcttgaccagaggtatcaatttctgagcaa 199
             |||||||| | ||| |||||||||||  ||||||||||||||||||||| |||||||| 
Sbjct: 3694 acagtgctccagtgcggaagaagctccaactcttgaccagaggtatcaatatctgagcag 3753

                                                                        
Query: 200  cgctgtgctacaagccaaaagtgcaggcattgctgctgattcgtcgagaaatcctattga 259
             || | | | || |||||||||||||||||| |||| ||||| ||||| |||||||||||
Sbjct: 3754 tgcagcgattcaggccaaaagtgcaggcattactgcagattcttcgaggaatcctattga 3813

                                                                        
Query: 260  tagtagtacggtggatctacttgaaggcaaacttacagtgcttcggtttcaaatgcaaat 319
            ||| || ||| | ||||||||||||||||||||| |||| |||||||| |||||||||||
Sbjct: 3814 tagcagcacgatagatctacttgaaggcaaacttgcagttcttcggttccaaatgcaaat 3873

                                                                        
Query: 320  caaacaggaattagagtctatggcttcacggcttgaagctatcccagacagttctgaatc 379
            ||| || ||| ||||||  |||||||||| |||||||  | |  ||| ||||||||||||
Sbjct: 3874 caagcaagaactagagttcatggcttcacagcttgaaaatctgtcaggcagttctgaatc 3933

                                                    
Query: 380  acccagtgaccccttcccgcgtgataatattctagctgat 419
            ||| | ||| ||||| || |||||||| ||||||||||||
Sbjct: 3934 accaaatgatccctttcctcgtgataacattctagctgat 3973



 Score =  236 bits (119), Expect = 7e-59
 Identities = 164/179 (91%)
 Strand = Plus / Plus

                                                                        
Query: 438  gccaaggacaaggcgaaagagctttcactgaatcttaagagtattactcaactatacaat 497
            |||| ||||||||| |||||||||||||||||||| ||||||||||||||||| ||||| 
Sbjct: 3992 gccatggacaaggctaaagagctttcactgaatctaaagagtattactcaactttacaac 4051

                                                                        
Query: 498  gactatgctgttccatttaatctttgggaggtttgcctggaaatgctgaactttgcaaat 557
            || |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 4052 gattatgctgttccatttaatctttgggaggtttgcctggaaatgctcaactttgcaaat 4111

                                                                       
Query: 558  tactctggagacgctgatagcaaaattgtccgggaaatttgggccagactccttgacca 616
            || |||||||| ||||| || |||||||| || |||||||||||||| || ||||||||
Sbjct: 4112 tattctggagatgctgacagtaaaattgttcgagaaatttgggccaggcttcttgacca 4170

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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score =  182 bits (92), Expect = 9e-43
 Identities = 203/240 (84%)
 Strand = Plus / Plus

                                                                            
Query: 180      aggtatcaatttctgagcaacgctgtgctacaagccaaaagtgcaggcattgctgctgat 239
                |||||||||| ||||||||  || | | | || |||||||||||||||||| |||| |||
Sbjct: 11365911 aggtatcaatatctgagcagtgcagcgattcaggccaaaagtgcaggcattactgcagat 11365970

                                                                            
Query: 240      tcgtcgagaaatcctattgatagtagtacggtggatctacttgaaggcaaacttacagtg 299
                || ||||| |||||||||||||| || ||| | ||||||||||||||||||||| |||| 
Sbjct: 11365971 tcttcgaggaatcctattgatagcagcacgatagatctacttgaaggcaaacttgcagtt 11366030

                                                                            
Query: 300      cttcggtttcaaatgcaaatcaaacaggaattagagtctatggcttcacggcttgaagct 359
                |||||||| |||||||||||||| || ||| ||||||  |||||||||| |||||||  |
Sbjct: 11366031 cttcggttccaaatgcaaatcaagcaagaactagagttcatggcttcacagcttgaaaat 11366090

                                                                            
Query: 360      atcccagacagttctgaatcacccagtgaccccttcccgcgtgataatattctagctgat 419
                 |  ||| ||||||||||||||| | ||| ||||| || |||||||| ||||||||||||
Sbjct: 11366091 ctgtcaggcagttctgaatcaccaaatgatccctttcctcgtgataacattctagctgat 11366150



 Score =  174 bits (88), Expect = 2e-40
 Identities = 145/164 (88%)
 Strand = Plus / Plus

                                                                            
Query: 20       tgatttaggtgcacctatttctactagccaaacgaagtatcttgagctcctagcaaggta 79
                |||||| | |||||||||||| ||||| ||||| |||||||||||||| ||||| |||||
Sbjct: 11365632 tgatttggatgcacctatttcaactagtcaaaccaagtatcttgagctgctagccaggta 11365691

                                                                            
Query: 80       ctatgttctcaagggggagcatgttgctgctgccaggatgttattgatattggcggaaag 139
                 ||||||||||||||||||||| |||||||||| || ||||| ||||||||||| |||||
Sbjct: 11365692 ttatgttctcaagggggagcatattgctgctgctagaatgttgttgatattggcagaaag 11365751

                                                            
Query: 140      gcagtgctctaatgccgaagaagctcctgctcttgaccagaggt 183
                 |||||||| | ||| |||||||||||  |||||||||||||||
Sbjct: 11365752 acagtgctccagtgcggaagaagctccaactcttgaccagaggt 11365795



 Score =  135 bits (68), Expect = 2e-28
 Identities = 86/92 (93%)
 Strand = Plus / Plus

                                                                            
Query: 438      gccaaggacaaggcgaaagagctttcactgaatcttaagagtattactcaactatacaat 497
                |||| ||||||||| |||||||||||||||||||| ||||||||||||||||| ||||| 
Sbjct: 11366169 gccatggacaaggctaaagagctttcactgaatctaaagagtattactcaactttacaac 11366228

                                                
Query: 498      gactatgctgttccatttaatctttgggaggt 529
                || |||||||||||||||||||||||||||||
Sbjct: 11366229 gattatgctgttccatttaatctttgggaggt 11366260



 Score =  109 bits (55), Expect = 1e-20
 Identities = 82/91 (90%)
 Strand = Plus / Plus

                                                                            
Query: 526      aggtttgcctggaaatgctgaactttgcaaattactctggagacgctgatagcaaaattg 585
                ||||||||||||||||||| |||||||||||||| |||||||| ||||| || |||||||
Sbjct: 11367210 aggtttgcctggaaatgctcaactttgcaaattattctggagatgctgacagtaaaattg 11367269

                                               
Query: 586      tccgggaaatttgggccagactccttgacca 616
                | || |||||||||||||| || ||||||||
Sbjct: 11367270 ttcgagaaatttgggccaggcttcttgacca 11367300

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>dbj|AP006164.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:B1386G10
          Length = 121827

 Score =  182 bits (92), Expect = 9e-43
 Identities = 203/240 (84%)
 Strand = Plus / Plus

                                                                         
Query: 180   aggtatcaatttctgagcaacgctgtgctacaagccaaaagtgcaggcattgctgctgat 239
             |||||||||| ||||||||  || | | | || |||||||||||||||||| |||| |||
Sbjct: 53620 aggtatcaatatctgagcagtgcagcgattcaggccaaaagtgcaggcattactgcagat 53679

                                                                         
Query: 240   tcgtcgagaaatcctattgatagtagtacggtggatctacttgaaggcaaacttacagtg 299
             || ||||| |||||||||||||| || ||| | ||||||||||||||||||||| |||| 
Sbjct: 53680 tcttcgaggaatcctattgatagcagcacgatagatctacttgaaggcaaacttgcagtt 53739

                                                                         
Query: 300   cttcggtttcaaatgcaaatcaaacaggaattagagtctatggcttcacggcttgaagct 359
             |||||||| |||||||||||||| || ||| ||||||  |||||||||| |||||||  |
Sbjct: 53740 cttcggttccaaatgcaaatcaagcaagaactagagttcatggcttcacagcttgaaaat 53799

                                                                         
Query: 360   atcccagacagttctgaatcacccagtgaccccttcccgcgtgataatattctagctgat 419
              |  ||| ||||||||||||||| | ||| ||||| || |||||||| ||||||||||||
Sbjct: 53800 ctgtcaggcagttctgaatcaccaaatgatccctttcctcgtgataacattctagctgat 53859



 Score =  174 bits (88), Expect = 2e-40
 Identities = 145/164 (88%)
 Strand = Plus / Plus

                                                                         
Query: 20    tgatttaggtgcacctatttctactagccaaacgaagtatcttgagctcctagcaaggta 79
             |||||| | |||||||||||| ||||| ||||| |||||||||||||| ||||| |||||
Sbjct: 53341 tgatttggatgcacctatttcaactagtcaaaccaagtatcttgagctgctagccaggta 53400

                                                                         
Query: 80    ctatgttctcaagggggagcatgttgctgctgccaggatgttattgatattggcggaaag 139
              ||||||||||||||||||||| |||||||||| || ||||| ||||||||||| |||||
Sbjct: 53401 ttatgttctcaagggggagcatattgctgctgctagaatgttgttgatattggcagaaag 53460

                                                         
Query: 140   gcagtgctctaatgccgaagaagctcctgctcttgaccagaggt 183
              |||||||| | ||| |||||||||||  |||||||||||||||
Sbjct: 53461 acagtgctccagtgcggaagaagctccaactcttgaccagaggt 53504



 Score =  135 bits (68), Expect = 2e-28
 Identities = 86/92 (93%)
 Strand = Plus / Plus

                                                                         
Query: 438   gccaaggacaaggcgaaagagctttcactgaatcttaagagtattactcaactatacaat 497
             |||| ||||||||| |||||||||||||||||||| ||||||||||||||||| ||||| 
Sbjct: 53878 gccatggacaaggctaaagagctttcactgaatctaaagagtattactcaactttacaac 53937

                                             
Query: 498   gactatgctgttccatttaatctttgggaggt 529
             || |||||||||||||||||||||||||||||
Sbjct: 53938 gattatgctgttccatttaatctttgggaggt 53969



 Score =  109 bits (55), Expect = 1e-20
 Identities = 82/91 (90%)
 Strand = Plus / Plus

                                                                         
Query: 526   aggtttgcctggaaatgctgaactttgcaaattactctggagacgctgatagcaaaattg 585
             ||||||||||||||||||| |||||||||||||| |||||||| ||||| || |||||||
Sbjct: 54919 aggtttgcctggaaatgctcaactttgcaaattattctggagatgctgacagtaaaattg 54978

                                            
Query: 586   tccgggaaatttgggccagactccttgacca 616
             | || |||||||||||||| || ||||||||
Sbjct: 54979 ttcgagaaatttgggccaggcttcttgacca 55009

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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  167 bits (84), Expect = 5e-38
 Identities = 144/164 (87%)
 Strand = Plus / Plus

                                                                           
Query: 20      tgatttaggtgcacctatttctactagccaaacgaagtatcttgagctcctagcaaggta 79
               |||||| | |||||||||||| ||||| ||||| |||||||||||||| ||||| |||||
Sbjct: 6454017 tgatttggatgcacctatttcaactagtcaaaccaagtatcttgagctgctagccaggta 6454076

                                                                           
Query: 80      ctatgttctcaagggggagcatgttgctgctgccaggatgttattgatattggcggaaag 139
                ||||||||||||||||||||| |||||||||| || ||||| ||||||||||| |||||
Sbjct: 6454077 ttatgttctcaagggggagcatattgctgctgctagaatgttgttgatattggcagaaag 6454136

                                                           
Query: 140     gcagtgctctaatgccgaagaagctcctgctcttgaccagaggt 183
                |||||||| | ||| ||||||||| |  |||||||||||||||
Sbjct: 6454137 acagtgctccagtgcggaagaagcttcaactcttgaccagaggt 6454180



 Score =  151 bits (76), Expect = 3e-33
 Identities = 283/350 (80%), Gaps = 4/350 (1%)
 Strand = Plus / Plus

                                                                           
Query: 180     aggtatcaatttctgagcaacgctgtgctacaagccaaaagtgcaggcattgctgctgat 239
               |||||||||| ||||||||  |||| | | || | |||||||| ||| ||| |||| |||
Sbjct: 6454297 aggtatcaatatctgagcagtgctgcggttcagggcaaaagtgaagggattactgcagat 6454356

                                                                           
Query: 240     tcgtcgagaaatcctattgatagtagtacggtggatctacttgaaggcaaacttacagtg 299
               || ||||| || ||||||||||| ||  | || |||| |||||||||||||||| |||| 
Sbjct: 6454357 tcctcgaggaaccctattgatagcagcgcagtagatcgacttgaaggcaaacttgcagtt 6454416

                                                                           
Query: 300     cttcggtttcaaatgcaaatcaaacaggaattagagtctatggcttcacggcttgaagct 359
               |||| ||| ||||||||||||||  | ||||   |||  ||||||||||||||||||  |
Sbjct: 6454417 cttcagttccaaatgcaaatcaagtaagaat---agttcatggcttcacggcttgaaaat 6454473

                                                                           
Query: 360     atcccagacagttctgaatcacccagtgaccccttcccgcgtgataatattctagctgat 419
                | |||| |||| |||||||||| | |||  ||||||  | |||||| ||||||||||||
Sbjct: 6454474 ctgccaggcagtactgaatcaccaaatgatgccttcct-catgataacattctagctgat 6454532

                                                                           
Query: 420     ttagaatctgccaaggaggccaaggacaaggcgaaagagctttcactgaatcttaagagt 479
                | ||  |||| |      ||| ||||||||| |||||||||||||||||||| ||||||
Sbjct: 6454533 gtggagactgctagatgtcccatggacaaggctaaagagctttcactgaatctcaagagt 6454592

                                                                 
Query: 480     attactcaactatacaatgactatgctgttccatttaatctttgggaggt 529
               ||||||||||| | |||  | ||||||||||| |||||||||||||||||
Sbjct: 6454593 attactcaacttttcaacaattatgctgttccttttaatctttgggaggt 6454642



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 58/67 (86%)
 Strand = Plus / Plus

                                                                           
Query: 546     aactttgcaaattactctggagacgctgatagcaaaattgtccgggaaatttgggccaga 605
               |||||||||||||| |||||||| ||||| || |||||| |  | |||||||||||||| 
Sbjct: 6455468 aactttgcaaattattctggagatgctgacagtaaaattatttgagaaatttgggccagg 6455527

                      
Query: 606     ctccttg 612
               |||||||
Sbjct: 6455528 ctccttg 6455534

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>gb|AC105364.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1743A09,
              complete sequence
          Length = 146568

 Score =  167 bits (84), Expect = 5e-38
 Identities = 144/164 (87%)
 Strand = Plus / Plus

                                                                          
Query: 20     tgatttaggtgcacctatttctactagccaaacgaagtatcttgagctcctagcaaggta 79
              |||||| | |||||||||||| ||||| ||||| |||||||||||||| ||||| |||||
Sbjct: 134143 tgatttggatgcacctatttcaactagtcaaaccaagtatcttgagctgctagccaggta 134202

                                                                          
Query: 80     ctatgttctcaagggggagcatgttgctgctgccaggatgttattgatattggcggaaag 139
               ||||||||||||||||||||| |||||||||| || ||||| ||||||||||| |||||
Sbjct: 134203 ttatgttctcaagggggagcatattgctgctgctagaatgttgttgatattggcagaaag 134262

                                                          
Query: 140    gcagtgctctaatgccgaagaagctcctgctcttgaccagaggt 183
               |||||||| | ||| ||||||||| |  |||||||||||||||
Sbjct: 134263 acagtgctccagtgcggaagaagcttcaactcttgaccagaggt 134306



 Score =  151 bits (76), Expect = 3e-33
 Identities = 283/350 (80%), Gaps = 4/350 (1%)
 Strand = Plus / Plus

                                                                          
Query: 180    aggtatcaatttctgagcaacgctgtgctacaagccaaaagtgcaggcattgctgctgat 239
              |||||||||| ||||||||  |||| | | || | |||||||| ||| ||| |||| |||
Sbjct: 134423 aggtatcaatatctgagcagtgctgcggttcagggcaaaagtgaagggattactgcagat 134482

                                                                          
Query: 240    tcgtcgagaaatcctattgatagtagtacggtggatctacttgaaggcaaacttacagtg 299
              || ||||| || ||||||||||| ||  | || |||| |||||||||||||||| |||| 
Sbjct: 134483 tcctcgaggaaccctattgatagcagcgcagtagatcgacttgaaggcaaacttgcagtt 134542

                                                                          
Query: 300    cttcggtttcaaatgcaaatcaaacaggaattagagtctatggcttcacggcttgaagct 359
              |||| ||| ||||||||||||||  | ||||   |||  ||||||||||||||||||  |
Sbjct: 134543 cttcagttccaaatgcaaatcaagtaagaat---agttcatggcttcacggcttgaaaat 134599

                                                                          
Query: 360    atcccagacagttctgaatcacccagtgaccccttcccgcgtgataatattctagctgat 419
               | |||| |||| |||||||||| | |||  ||||||  | |||||| ||||||||||||
Sbjct: 134600 ctgccaggcagtactgaatcaccaaatgatgccttcct-catgataacattctagctgat 134658

                                                                          
Query: 420    ttagaatctgccaaggaggccaaggacaaggcgaaagagctttcactgaatcttaagagt 479
               | ||  |||| |      ||| ||||||||| |||||||||||||||||||| ||||||
Sbjct: 134659 gtggagactgctagatgtcccatggacaaggctaaagagctttcactgaatctcaagagt 134718

                                                                
Query: 480    attactcaactatacaatgactatgctgttccatttaatctttgggaggt 529
              ||||||||||| | |||  | ||||||||||| |||||||||||||||||
Sbjct: 134719 attactcaacttttcaacaattatgctgttccttttaatctttgggaggt 134768



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 58/67 (86%)
 Strand = Plus / Plus

                                                                          
Query: 546    aactttgcaaattactctggagacgctgatagcaaaattgtccgggaaatttgggccaga 605
              |||||||||||||| |||||||| ||||| || |||||| |  | |||||||||||||| 
Sbjct: 135594 aactttgcaaattattctggagatgctgacagtaaaattatttgagaaatttgggccagg 135653

                     
Query: 606    ctccttg 612
              |||||||
Sbjct: 135654 ctccttg 135660

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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score =  167 bits (84), Expect = 5e-38
 Identities = 144/164 (87%)
 Strand = Plus / Plus

                                                                           
Query: 20      tgatttaggtgcacctatttctactagccaaacgaagtatcttgagctcctagcaaggta 79
               |||||| | |||||||||||| ||||| ||||| |||||||||||||| ||||| |||||
Sbjct: 6453230 tgatttggatgcacctatttcaactagtcaaaccaagtatcttgagctgctagccaggta 6453289

                                                                           
Query: 80      ctatgttctcaagggggagcatgttgctgctgccaggatgttattgatattggcggaaag 139
                ||||||||||||||||||||| |||||||||| || ||||| ||||||||||| |||||
Sbjct: 6453290 ttatgttctcaagggggagcatattgctgctgctagaatgttgttgatattggcagaaag 6453349

                                                           
Query: 140     gcagtgctctaatgccgaagaagctcctgctcttgaccagaggt 183
                |||||||| | ||| ||||||||| |  |||||||||||||||
Sbjct: 6453350 acagtgctccagtgcggaagaagcttcaactcttgaccagaggt 6453393



 Score =  151 bits (76), Expect = 3e-33
 Identities = 283/350 (80%), Gaps = 4/350 (1%)
 Strand = Plus / Plus

                                                                           
Query: 180     aggtatcaatttctgagcaacgctgtgctacaagccaaaagtgcaggcattgctgctgat 239
               |||||||||| ||||||||  |||| | | || | |||||||| ||| ||| |||| |||
Sbjct: 6453510 aggtatcaatatctgagcagtgctgcggttcagggcaaaagtgaagggattactgcagat 6453569

                                                                           
Query: 240     tcgtcgagaaatcctattgatagtagtacggtggatctacttgaaggcaaacttacagtg 299
               || ||||| || ||||||||||| ||  | || |||| |||||||||||||||| |||| 
Sbjct: 6453570 tcctcgaggaaccctattgatagcagcgcagtagatcgacttgaaggcaaacttgcagtt 6453629

                                                                           
Query: 300     cttcggtttcaaatgcaaatcaaacaggaattagagtctatggcttcacggcttgaagct 359
               |||| ||| ||||||||||||||  | ||||   |||  ||||||||||||||||||  |
Sbjct: 6453630 cttcagttccaaatgcaaatcaagtaagaat---agttcatggcttcacggcttgaaaat 6453686

                                                                           
Query: 360     atcccagacagttctgaatcacccagtgaccccttcccgcgtgataatattctagctgat 419
                | |||| |||| |||||||||| | |||  ||||||  | |||||| ||||||||||||
Sbjct: 6453687 ctgccaggcagtactgaatcaccaaatgatgccttcct-catgataacattctagctgat 6453745

                                                                           
Query: 420     ttagaatctgccaaggaggccaaggacaaggcgaaagagctttcactgaatcttaagagt 479
                | ||  |||| |      ||| ||||||||| |||||||||||||||||||| ||||||
Sbjct: 6453746 gtggagactgctagatgtcccatggacaaggctaaagagctttcactgaatctcaagagt 6453805

                                                                 
Query: 480     attactcaactatacaatgactatgctgttccatttaatctttgggaggt 529
               ||||||||||| | |||  | ||||||||||| |||||||||||||||||
Sbjct: 6453806 attactcaacttttcaacaattatgctgttccttttaatctttgggaggt 6453855



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 58/67 (86%)
 Strand = Plus / Plus

                                                                           
Query: 546     aactttgcaaattactctggagacgctgatagcaaaattgtccgggaaatttgggccaga 605
               |||||||||||||| |||||||| ||||| || |||||| |  | |||||||||||||| 
Sbjct: 6454681 aactttgcaaattattctggagatgctgacagtaaaattatttgagaaatttgggccagg 6454740

                      
Query: 606     ctccttg 612
               |||||||
Sbjct: 6454741 ctccttg 6454747

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>ref|NM_187699.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1812

 Score =  105 bits (53), Expect = 2e-19
 Identities = 77/85 (90%)
 Strand = Plus / Plus

                                                                        
Query: 443  ggacaaggcgaaagagctttcactgaatcttaagagtattactcaactatacaatgacta 502
            ||||||||| |||||||||||||||||||| ||||||||||||||||| | |||  | ||
Sbjct: 1527 ggacaaggctaaagagctttcactgaatctcaagagtattactcaacttttcaacaatta 1586

                                     
Query: 503  tgctgttccatttaatctttgggag 527
            ||||||||| |||||||||||||||
Sbjct: 1587 tgctgttccttttaatctttgggag 1611



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 119/144 (82%)
 Strand = Plus / Plus

                                                                        
Query: 180  aggtatcaatttctgagcaacgctgtgctacaagccaaaagtgcaggcattgctgctgat 239
            |||||||||| ||||||||  |||| | | || | |||||||| ||| ||| |||| |||
Sbjct: 1375 aggtatcaatatctgagcagtgctgcggttcagggcaaaagtgaagggattactgcagat 1434

                                                                        
Query: 240  tcgtcgagaaatcctattgatagtagtacggtggatctacttgaaggcaaacttacagtg 299
            || ||||| || ||||||||||| ||  | || |||| |||||||||||||||| |||| 
Sbjct: 1435 tcctcgaggaaccctattgatagcagcgcagtagatcgacttgaaggcaaacttgcagtt 1494

                                    
Query: 300  cttcggtttcaaatgcaaatcaaa 323
            |||| ||| |||||||||||||||
Sbjct: 1495 cttcagttccaaatgcaaatcaaa 1518



 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 48/54 (88%)
 Strand = Plus / Plus

                                                                  
Query: 20   tgatttaggtgcacctatttctactagccaaacgaagtatcttgagctcctagc 73
            |||||| | |||||||||||| ||||| ||||| |||||||||||||| |||||
Sbjct: 1254 tgatttggatgcacctatttcaactagtcaaaccaagtatcttgagctgctagc 1307

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>ref|NM_172880.1| Mus musculus transmembrane protease, serine 11e (Tmprss11e), mRNA
          Length = 3410

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 95   ggagcatgttgctgctgccagg 116
            ||||||||||||||||||||||
Sbjct: 1479 ggagcatgttgctgctgccagg 1500

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>gb|AC102016.4| Mus musculus chromosome 5, clone RP24-567O8, complete sequence
          Length = 154115

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 95     ggagcatgttgctgctgccagg 116
              ||||||||||||||||||||||
Sbjct: 140082 ggagcatgttgctgctgccagg 140103

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>dbj|AK162701.1| Mus musculus adult female vagina cDNA, RIKEN full-length enriched
            library, clone:9930102I10 product:hypothetical Peptidase
            S1A, chymotrypsin/Peptidase S1, chymotrypsin/Serine
            proteases, trypsin domain profile/Peptidase, trypsin-like
            serine and cysteine proteases containing protein, full
            insert sequence
          Length = 1676

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 95   ggagcatgttgctgctgccagg 116
            ||||||||||||||||||||||
Sbjct: 1475 ggagcatgttgctgctgccagg 1496

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>dbj|AK037235.1| Mus musculus 6 days neonate skin cDNA, RIKEN full-length enriched
            library, clone:A030012E10 product:similar to SERINE
            PROTEASE DESC1 PRECURSOR (EC 3.4.21.-) [Homo sapiens],
            full insert sequence
          Length = 3410

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 95   ggagcatgttgctgctgccagg 116
            ||||||||||||||||||||||
Sbjct: 1479 ggagcatgttgctgctgccagg 1500

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>emb|AL844583.6| Mouse DNA sequence from clone RP23-240F13 on chromosome X, complete
             sequence
          Length = 176870

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                           
Query: 590   ggaaatttgggccagactccttgaccaaac 619
             |||||||||  |||||||||||||||||||
Sbjct: 96479 ggaaatttgttccagactccttgaccaaac 96508

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>ref|NM_101354.2| Arabidopsis thaliana NUP155 AT1G14850 (NUP155) mRNA, complete cds
          Length = 4620

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 66/81 (81%)
 Strand = Plus / Plus

                                                                        
Query: 495  aatgactatgctgttccatttaatctttgggaggtttgcctggaaatgctgaactttgca 554
            ||||| |||||||| |||||| | || |||||| | || |||||||||||  ||||||| 
Sbjct: 3709 aatgagtatgctgtcccatttgagctctgggagatctgtctggaaatgctttactttgcc 3768

                                 
Query: 555  aattactctggagacgctgat 575
            || || ||||| || ||||||
Sbjct: 3769 aactattctggtgatgctgat 3789

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>gb|AE017341.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 1, complete
               sequence
          Length = 2300533

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 431     caaggaggccaaggacaaggcgaa 454
               |||||||| |||||||||||||||
Sbjct: 1103059 caaggaggacaaggacaaggcgaa 1103036

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>gb|AC005591.1| Homo sapiens chromosome 16, P1 clone 94-10H (LANL), complete sequence
          Length = 78941

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 434   ggaggccaaggacaaggcgaaaga 457
             ||||||||||||||||| ||||||
Sbjct: 68360 ggaggccaaggacaaggggaaaga 68383

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>gb|AC113311.9| Mus musculus chromosome 1, clone RP23-440J24, complete sequence
          Length = 260120

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 540   atgctgaactttgcaaattactct 563
             |||||||||||||||||| |||||
Sbjct: 21776 atgctgaactttgcaaataactct 21799

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>ref|XM_992873.1| PREDICTED: Mus musculus centrosomal protein 170, transcript variant 2
            (Cep170), mRNA
          Length = 2708

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 540  atgctgaactttgcaaattactct 563
            |||||||||||||||||| |||||
Sbjct: 1747 atgctgaactttgcaaataactct 1770

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>ref|XM_989619.1| PREDICTED: Mus musculus centrosomal protein 170, transcript variant 5
            (Cep170), mRNA
          Length = 2708

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 540  atgctgaactttgcaaattactct 563
            |||||||||||||||||| |||||
Sbjct: 1747 atgctgaactttgcaaataactct 1770

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>ref|XM_748412.1| Aspergillus fumigatus Af293 hypothetical protein (Afu5g11440)
           partial mRNA
          Length = 1443

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 322 aacaggaattagagtctatg 341
           ||||||||||||||||||||
Sbjct: 176 aacaggaattagagtctatg 195

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>gb|AC141586.2| Homo sapiens chromosome 16 clone CTD-3126B10, complete sequence
          Length = 127397

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 434   ggaggccaaggacaaggcgaaaga 457
             ||||||||||||||||| ||||||
Sbjct: 79773 ggaggccaaggacaaggggaaaga 79796

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>gb|AC129217.3| Mus musculus BAC clone RP24-458M20 from chromosome 19, complete
             sequence
          Length = 175796

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 310   aaatgcaaatcaaacaggaa 329
             ||||||||||||||||||||
Sbjct: 39796 aaatgcaaatcaaacaggaa 39815

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>gb|AC140104.22| Medicago truncatula clone mth2-10g22, complete sequence
          Length = 127043

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                      
Query: 490    tatacaatgactatgctgttccatttaatctttgggaggt 529
              |||| ||||| ||||||||||| ||||| || ||||||||
Sbjct: 126510 tatataatgaatatgctgttccctttaaactctgggaggt 126549



 Score = 40.1 bits (20), Expect = 8.5
 Identities = 56/68 (82%)
 Strand = Plus / Plus

                                                                          
Query: 279    cttgaaggcaaacttacagtgcttcggtttcaaatgcaaatcaaacaggaattagagtct 338
              |||||||| || ||| | || ||||||||||| ||  |||||||| ||||| |||||  |
Sbjct: 126296 cttgaagggaagcttgctgttcttcggtttcagataaaaatcaaagaggaactagagcat 126355

                      
Query: 339    atggcttc 346
              ||||||||
Sbjct: 126356 atggcttc 126363

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>gb|CP000300.1| Methanococcoides burtonii DSM 6242, complete genome
          Length = 2575032

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 118     tgttattgatattggcggaa 137
               ||||||||||||||||||||
Sbjct: 2000121 tgttattgatattggcggaa 2000140

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>gb|AC073153.16| Mus musculus Strain C57BL6/J chromosome 19 BAC, RP23-49P8 Complete
              Sequence, complete sequence
          Length = 220143

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 310    aaatgcaaatcaaacaggaa 329
              ||||||||||||||||||||
Sbjct: 190201 aaatgcaaatcaaacaggaa 190182

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>gb|AC144905.10| Mus musculus chromosome 1, clone RP23-293I7, complete sequence
          Length = 215928

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 540    atgctgaactttgcaaattactct 563
              |||||||||||||||||| |||||
Sbjct: 199852 atgctgaactttgcaaataactct 199875

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>emb|CR753899.5| Zebrafish DNA sequence from clone DKEY-267F18 in linkage group 5,
              complete sequence
          Length = 205476

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 306    tttcaaatgcaaatcaaaca 325
              ||||||||||||||||||||
Sbjct: 169964 tttcaaatgcaaatcaaaca 169945

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>gb|AC142395.41| Medicago truncatula clone mth2-18g1, complete sequence
          Length = 110556

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                     
Query: 490   tatacaatgactatgctgttccatttaatctttgggaggt 529
             |||| ||||| ||||||||||| ||||| || ||||||||
Sbjct: 86038 tatataatgaatatgctgttccctttaaactctgggaggt 86077



 Score = 40.1 bits (20), Expect = 8.5
 Identities = 56/68 (82%)
 Strand = Plus / Plus

                                                                         
Query: 279   cttgaaggcaaacttacagtgcttcggtttcaaatgcaaatcaaacaggaattagagtct 338
             |||||||| || ||| | || ||||||||||| ||  |||||||| ||||| |||||  |
Sbjct: 85824 cttgaagggaagcttgctgttcttcggtttcagataaaaatcaaagaggaactagagcat 85883

                     
Query: 339   atggcttc 346
             ||||||||
Sbjct: 85884 atggcttc 85891

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>emb|BX897688.7| Zebrafish DNA sequence from clone DKEY-127J5, complete sequence
          Length = 70570

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 369   agttctgaatcacccagtgacccc 392
             ||||||||||| ||||||||||||
Sbjct: 61422 agttctgaatcccccagtgacccc 61399

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>emb|BX950870.7| Zebrafish DNA sequence from clone DKEY-242M17 in linkage group 6,
              complete sequence
          Length = 186279

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 246    agaaatcctattgatagtag 265
              ||||||||||||||||||||
Sbjct: 177870 agaaatcctattgatagtag 177851

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>gb|AC083868.3| Homo sapiens chromosome 7 clone RP11-148L5, complete sequence
          Length = 183541

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 317   aatcaaacaggaattagagt 336
             ||||||||||||||||||||
Sbjct: 57119 aatcaaacaggaattagagt 57138

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>gb|BC054781.1| Mus musculus centrosomal protein 170, transcript variant 5, mRNA
            (cDNA clone IMAGE:6815870), complete cds
          Length = 2726

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 540  atgctgaactttgcaaattactct 563
            |||||||||||||||||| |||||
Sbjct: 1747 atgctgaactttgcaaataactct 1770

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>gb|BC057019.1| Mus musculus centrosomal protein 170, transcript variant 5, mRNA
            (cDNA clone IMAGE:6815870), complete cds
          Length = 2726

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 540  atgctgaactttgcaaattactct 563
            |||||||||||||||||| |||||
Sbjct: 1747 atgctgaactttgcaaataactct 1770

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>gb|AC004955.3| Homo sapiens PAC clone RP5-1087M19 from 7, complete sequence
          Length = 120557

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 316   aaatcaaacaggaattagag 335
             ||||||||||||||||||||
Sbjct: 84427 aaatcaaacaggaattagag 84408

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>emb|BX571667.5| Zebrafish DNA sequence from clone DKEY-267K7 in linkage group 1, complete
              sequence
          Length = 151582

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 306    tttcaaatgcaaatcaaaca 325
              ||||||||||||||||||||
Sbjct: 137674 tttcaaatgcaaatcaaaca 137693

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>gb|AC147213.3| Pan troglodytes BAC clone RP43-127I22 from chromosome 7, complete
             sequence
          Length = 205208

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 316   aaatcaaacaggaattagag 335
             ||||||||||||||||||||
Sbjct: 97756 aaatcaaacaggaattagag 97775

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>gb|AC139705.4| Homo sapiens X BAC RP11-102M2 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 148316

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 306   tttcaaatgcaaatcaaaca 325
             ||||||||||||||||||||
Sbjct: 37153 tttcaaatgcaaatcaaaca 37134

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>gb|AC008050.6|AC008050 Homo sapiens chromosome 14 clone RP11-141I24 map 14q24.3, complete
              sequence
          Length = 176975

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 547    actttgcaaattactctgga 566
              ||||||||||||||||||||
Sbjct: 143218 actttgcaaattactctgga 143237

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>gb|AC007376.9|AC007376 Homo sapiens chromosome 14 clone 99E15 containing gene for KIAA 1036,
             complete CDS, complete sequence
          Length = 186330

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 547   actttgcaaattactctgga 566
             ||||||||||||||||||||
Sbjct: 28726 actttgcaaattactctgga 28745

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>gb|AC093525.3| Homo sapiens chromosome 16 clone RP11-20I23, complete sequence
          Length = 157518

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 434  ggaggccaaggacaaggcgaaaga 457
            ||||||||||||||||| ||||||
Sbjct: 7298 ggaggccaaggacaaggggaaaga 7321

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>emb|BX005226.10| Zebrafish DNA sequence from clone CH211-175P12 in linkage group 22,
              complete sequence
          Length = 176642

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 310    aaatgcaaatcaaacaggaa 329
              ||||||||||||||||||||
Sbjct: 117293 aaatgcaaatcaaacaggaa 117312

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>emb|BX005271.9| Zebrafish DNA sequence from clone CH211-145F15 in linkage group 5,
             complete sequence
          Length = 162019

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 369   agttctgaatcacccagtgacccc 392
             ||||||||||| ||||||||||||
Sbjct: 25674 agttctgaatcccccagtgacccc 25651

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>emb|AJ336630.1|HSA336630 Homo sapiens genomic sequence surrounding NotI site, clone
           NR1-OC21R
          Length = 797

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 306 tttcaaatgcaaatcaaaca 325
           ||||||||||||||||||||
Sbjct: 41  tttcaaatgcaaatcaaaca 60

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>emb|BX004766.9| Zebrafish DNA sequence from clone DKEY-5P1 in linkage group 20,
             complete sequence
          Length = 214782

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 270   gtggatctacttgaaggcaa 289
             ||||||||||||||||||||
Sbjct: 15120 gtggatctacttgaaggcaa 15139

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>emb|AL121992.24|HSDJ680D5 Human DNA sequence from clone RP4-680D5 on chromosome 1p36.13-36.31
             Contains the 3' end of the gene for a novel DnaJ
             domain-containing protein (KIAA0962, FLJ13743, FLJ12468),
             the AGMAT gene for agmatine ureohydrolase (agmatinase), a
             novel gene (FLJ34180), a novel pseudogene similar to Mus
             musculus ethanol induced 6 (Etohi6), a CD24 antigen (small
             cell lung carcinoma cluster 4 antigen) (CD24) pseudogene,
             the gene for DNA-damage inducible protein 2 (DDI2), the
             RSC1A1 gene for regulatory solute carrier protein family 1
             member 1 and the 5' end of the gene for a novel RUN and PH
             domain-containing protein (KIAA0842), complete sequence
          Length = 170399

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 429   gccaaggaggccaaggacaa 448
             ||||||||||||||||||||
Sbjct: 14261 gccaaggaggccaaggacaa 14280

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>gb|AC147236.3| Mus musculus BAC clone RP23-357C20 from 1, complete sequence
          Length = 217902

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 418    atttagaatctgccaaggag 437
              ||||||||||||||||||||
Sbjct: 143384 atttagaatctgccaaggag 143365

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>dbj|AP004911.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT13O11, TM0069,
             complete sequence
          Length = 103659

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 56/68 (82%)
 Strand = Plus / Plus

                                                                         
Query: 279   cttgaaggcaaacttacagtgcttcggtttcaaatgcaaatcaaacaggaattagagtct 338
             |||||||| || ||| | |||||||||||||| ||  |||||||| |||| || ||  ||
Sbjct: 96249 cttgaagggaagcttgctgtgcttcggtttcagataaaaatcaaagaggagttcgaagct 96308

                     
Query: 339   atggcttc 346
             ||||||||
Sbjct: 96309 atggcttc 96316


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,551,139
Number of Sequences: 3902068
Number of extensions: 5551139
Number of successful extensions: 221025
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 220773
Number of HSP's gapped (non-prelim): 245
length of query: 625
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 602
effective length of database: 17,143,297,704
effective search space: 10320265217808
effective search space used: 10320265217808
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result