ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags17i05 |
|---|---|
| Clone Library Name | barley_pub |
>emb|X77733.1|TAVDAC1 T.aestivum VDAC 1 mRNA Length = 1159 Score = 837 bits (422), Expect = 0.0 Identities = 575/623 (92%), Gaps = 6/623 (0%) Strand = Plus / Plus Query: 2 tgattatgctggtattaatgcaagcattggcttgactgccaatcctgtagtcaacctctc 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 387 tgattatgctggtattaatgcaagcattggcttgactgccaatcctgtagtcaacctctc 446 Query: 62 tgctgcgtttggaactagtgctctagctgttggtggtgatgtgtcgcttgatacatccac 121 | ||||| ||||||||||||||||||||||||| ||| ||||||||||||||| |||| Sbjct: 447 cggcgcgttcggaactagtgctctagctgttggtgctgacgtgtcgcttgatacagccac 506 Query: 122 caagaatttcaccaaatacaatgctgcgtttagctacactaaccaagatcttatcgcatc 181 |||||||||| |||||||||||||||| |||||||||||||||| |||||||||||||| Sbjct: 507 caagaatttcgccaaatacaatgctgcacttagctacactaaccaggatcttatcgcatc 566 Query: 182 cctgaacctgaacaacaagggagacagcctcaccgcatcctattaccactttgtggagaa 241 |||||||||||||||||||||||||||||| || ||||||||||||||| |||||||||| Sbjct: 567 cctgaacctgaacaacaagggagacagcctgactgcatcctattaccacattgtggagaa 626 Query: 242 gtccagcacagctgttggggcggagctgacccacagcttctcgagcaacgagaacagcct 301 ||| |||||||||||||||| |||||||||||||||||||| ||||||||||||||||| Sbjct: 627 atccggcacagctgttggggcagagctgacccacagcttctcaagcaacgagaacagcct 686 Query: 302 caccttcggcactcagcataccctagacccgctcaccctcgtgaaggctcgcatcaacaa 361 |||||||||||| ||||||||||| |||||||||||||| |||||||| || |||||||| Sbjct: 687 caccttcggcacccagcataccctggacccgctcacccttgtgaaggcccggatcaacaa 746 Query: 362 ctctggcaaggcaagcgcgctgatccagcacgagttcaggccgaagtcgctctgcaccat 421 |||||||||||| ||||||||||||||||||||||||| ||| |||||||| |||||||| Sbjct: 747 ctctggcaaggccagcgcgctgatccagcacgagttcatgccaaagtcgctgtgcaccat 806 Query: 422 ctcggcggaggtggacaccaaggccatcgagaagagctcgaaggtcggcattgcgattgc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 807 ctcggcggaggtggacaccaaggccatcgagaagagctcgaaggtcggcattgctattgc 866 Query: 482 tctcaagccttgatggcgaaatcaagccctctcttttctgaactc----tcaggggtgtt 537 |||||||||||||| ||| |||||||||| | ||| ||| | ||| ||||||||||| Sbjct: 867 tctcaagccttgattgcggaatcaagccc-cccttctctaagctctcagtcaggggtgtt 925 Query: 538 cctcggtttcggatggaatcgtggcgatttgacaaatacttcacacgccttgggcgcgtt 597 ||||||||||||||| ||||| |||| ||||| ||||||||||| |||||||| |||| Sbjct: 926 cctcggtttcggatgaaatcggggcgggttgac-aatacttcacagcccttgggcccgtt 984 Query: 598 gtcgcagtctgttagatttgaag 620 || |||||||||||||||||||| Sbjct: 985 gttgcagtctgttagatttgaag 1007
>ref|XM_450604.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1124 Score = 321 bits (162), Expect = 2e-84 Identities = 411/494 (83%) Strand = Plus / Plus Query: 2 tgattatgctggtattaatgcaagcattggcttgactgccaatcctgtagtcaacctctc 61 ||||||||||||| ||| |||||| ||||| |||||||||| |||||||||||| ||||| Sbjct: 422 tgattatgctggtgttagtgcaagtattggtttgactgccagtcctgtagtcaatctctc 481 Query: 62 tgctgcgtttggaactagtgctctagctgttggtggtgatgtgtcgcttgatacatccac 121 || |||||||| | ||||| |||||||||| |||||| || |||||||| |||| Sbjct: 482 cagtgtttttggaaccaaggctcttgctgttggtgctgatgtctcacttgataccgccac 541 Query: 122 caagaatttcaccaaatacaatgctgcgtttagctacactaaccaagatcttatcgcatc 181 ||| || |||||||| ||||||| || |||| || ||| | ||||||||||| || Sbjct: 542 ggggaacttgaccaaatataatgctggattgagcttcagtaatgatgatcttatcgcgtc 601 Query: 182 cctgaacctgaacaacaagggagacagcctcaccgcatcctattaccactttgtggagaa 241 |||||||||||||||||||||| || ||||| ||||| ||||||||| ||||| | | Sbjct: 602 attgaacctgaacaacaagggagatagtctcactgcatcttattaccacattgtgaacca 661 Query: 242 gtccagcacagctgttggggcggagctgacccacagcttctcgagcaacgagaacagcct 301 || |||||||||||| || ||||||||||||||||||||||||||||||||| ||| Sbjct: 662 ttcggccacagctgttggagctgagctgacccacagcttctcgagcaacgagaactccct 721 Query: 302 caccttcggcactcagcataccctagacccgctcaccctcgtgaaggctcgcatcaacaa 361 ||||||||| || ||||| || || |||||||| ||| |||||||||| ||| ||||||| Sbjct: 722 caccttcggtacccagcacactctcgacccgcttaccgtcgtgaaggcccgcttcaacaa 781 Query: 362 ctctggcaaggcaagcgcgctgatccagcacgagttcaggccgaagtcgctctgcaccat 421 || |||||||| ||||||||| |||||||||||| ||||| ||||| | || ||||| Sbjct: 782 ttccggcaaggccagcgcgctgctccagcacgagtggaggccaaagtctgtgtggaccat 841 Query: 422 ctcggcggaggtggacaccaaggccatcgagaagagctcgaaggtcggcattgcgattgc 481 ||| || || || |||||||||||||| || |||||||| ||||||||||||||| | || Sbjct: 842 ctcagcagaagttgacaccaaggccattgacaagagctcaaaggtcggcattgcggtggc 901 Query: 482 tctcaagccttgat 495 ||||||||||||| Sbjct: 902 cctcaagccttgat 915
>emb|Y18104.1|OSA18104 Oryza sativa mRNA for voltage-dependent anion channel Length = 1093 Score = 321 bits (162), Expect = 2e-84 Identities = 411/494 (83%) Strand = Plus / Plus Query: 2 tgattatgctggtattaatgcaagcattggcttgactgccaatcctgtagtcaacctctc 61 ||||||||||||| ||| |||||| ||||| |||||||||| |||||||||||| ||||| Sbjct: 359 tgattatgctggtgttagtgcaagtattggtttgactgccagtcctgtagtcaatctctc 418 Query: 62 tgctgcgtttggaactagtgctctagctgttggtggtgatgtgtcgcttgatacatccac 121 || |||||||| | ||||| |||||||||| |||||| || |||||||| |||| Sbjct: 419 cagtgtttttggaaccaaggctcttgctgttggtgctgatgtctcacttgataccgccac 478 Query: 122 caagaatttcaccaaatacaatgctgcgtttagctacactaaccaagatcttatcgcatc 181 ||| || |||||||| ||||||| || |||| || ||| | ||||||||||| || Sbjct: 479 ggggaacttgaccaaatataatgctggattgagcttcagtaatgatgatcttatcgcgtc 538 Query: 182 cctgaacctgaacaacaagggagacagcctcaccgcatcctattaccactttgtggagaa 241 |||||||||||||||||||||| || ||||| ||||| ||||||||| ||||| | | Sbjct: 539 attgaacctgaacaacaagggagatagtctcactgcatcttattaccacattgtgaacca 598 Query: 242 gtccagcacagctgttggggcggagctgacccacagcttctcgagcaacgagaacagcct 301 || |||||||||||| || ||||||||||||||||||||||||||||||||| ||| Sbjct: 599 ttcggccacagctgttggagctgagctgacccacagcttctcgagcaacgagaactccct 658 Query: 302 caccttcggcactcagcataccctagacccgctcaccctcgtgaaggctcgcatcaacaa 361 ||||||||| || ||||| || || |||||||| ||| |||||||||| ||| ||||||| Sbjct: 659 caccttcggtacccagcacactctcgacccgcttaccgtcgtgaaggcccgcttcaacaa 718 Query: 362 ctctggcaaggcaagcgcgctgatccagcacgagttcaggccgaagtcgctctgcaccat 421 || |||||||| ||||||||| |||||||||||| ||||| ||||| | || ||||| Sbjct: 719 ttccggcaaggccagcgcgctgctccagcacgagtggaggccaaagtctgtgtggaccat 778 Query: 422 ctcggcggaggtggacaccaaggccatcgagaagagctcgaaggtcggcattgcgattgc 481 ||| || || || |||||||||||||| || |||||||| ||||||||||||||| | || Sbjct: 779 ctcagcagaagttgacaccaaggccattgacaagagctcaaaggtcggcattgcggtggc 838 Query: 482 tctcaagccttgat 495 ||||||||||||| Sbjct: 839 cctcaagccttgat 852
>dbj|AK061261.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-C01, full insert sequence Length = 1125 Score = 321 bits (162), Expect = 2e-84 Identities = 411/494 (83%) Strand = Plus / Plus Query: 2 tgattatgctggtattaatgcaagcattggcttgactgccaatcctgtagtcaacctctc 61 ||||||||||||| ||| |||||| ||||| |||||||||| |||||||||||| ||||| Sbjct: 422 tgattatgctggtgttagtgcaagtattggtttgactgccagtcctgtagtcaatctctc 481 Query: 62 tgctgcgtttggaactagtgctctagctgttggtggtgatgtgtcgcttgatacatccac 121 || |||||||| | ||||| |||||||||| |||||| || |||||||| |||| Sbjct: 482 cagtgtttttggaaccaaggctcttgctgttggtgctgatgtctcacttgataccgccac 541 Query: 122 caagaatttcaccaaatacaatgctgcgtttagctacactaaccaagatcttatcgcatc 181 ||| || |||||||| ||||||| || |||| || ||| | ||||||||||| || Sbjct: 542 ggggaacttgaccaaatataatgctggattgagcttcagtaatgatgatcttatcgcgtc 601 Query: 182 cctgaacctgaacaacaagggagacagcctcaccgcatcctattaccactttgtggagaa 241 |||||||||||||||||||||| || ||||| ||||| ||||||||| ||||| | | Sbjct: 602 attgaacctgaacaacaagggagatagtctcactgcatcttattaccacattgtgaacca 661 Query: 242 gtccagcacagctgttggggcggagctgacccacagcttctcgagcaacgagaacagcct 301 || |||||||||||| || ||||||||||||||||||||||||||||||||| ||| Sbjct: 662 ttcggccacagctgttggagctgagctgacccacagcttctcgagcaacgagaactccct 721 Query: 302 caccttcggcactcagcataccctagacccgctcaccctcgtgaaggctcgcatcaacaa 361 ||||||||| || ||||| || || |||||||| ||| |||||||||| ||| ||||||| Sbjct: 722 caccttcggtacccagcacactctcgacccgcttaccgtcgtgaaggcccgcttcaacaa 781 Query: 362 ctctggcaaggcaagcgcgctgatccagcacgagttcaggccgaagtcgctctgcaccat 421 || |||||||| ||||||||| |||||||||||| ||||| ||||| | || ||||| Sbjct: 782 ttccggcaaggccagcgcgctgctccagcacgagtggaggccaaagtctgtgtggaccat 841 Query: 422 ctcggcggaggtggacaccaaggccatcgagaagagctcgaaggtcggcattgcgattgc 481 ||| || || || |||||||||||||| || |||||||| ||||||||||||||| | || Sbjct: 842 ctcagcagaagttgacaccaaggccattgacaagagctcaaaggtcggcattgcggtggc 901 Query: 482 tctcaagccttgat 495 ||||||||||||| Sbjct: 902 cctcaagccttgat 915
>dbj|AK060652.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-027-H05, full insert sequence Length = 1242 Score = 321 bits (162), Expect = 2e-84 Identities = 411/494 (83%) Strand = Plus / Plus Query: 2 tgattatgctggtattaatgcaagcattggcttgactgccaatcctgtagtcaacctctc 61 ||||||||||||| ||| |||||| ||||| |||||||||| |||||||||||| ||||| Sbjct: 436 tgattatgctggtgttagtgcaagtattggtttgactgccagtcctgtagtcaatctctc 495 Query: 62 tgctgcgtttggaactagtgctctagctgttggtggtgatgtgtcgcttgatacatccac 121 || |||||||| | ||||| |||||||||| |||||| || |||||||| |||| Sbjct: 496 cagtgtttttggaaccaaggctcttgctgttggtgctgatgtctcacttgataccgccac 555 Query: 122 caagaatttcaccaaatacaatgctgcgtttagctacactaaccaagatcttatcgcatc 181 ||| || |||||||| ||||||| || |||| || ||| | ||||||||||| || Sbjct: 556 ggggaacttgaccaaatataatgctggattgagcttcagtaatgatgatcttatcgcgtc 615 Query: 182 cctgaacctgaacaacaagggagacagcctcaccgcatcctattaccactttgtggagaa 241 |||||||||||||||||||||| || ||||| ||||| ||||||||| ||||| | | Sbjct: 616 attgaacctgaacaacaagggagatagtctcactgcatcttattaccacattgtgaacca 675 Query: 242 gtccagcacagctgttggggcggagctgacccacagcttctcgagcaacgagaacagcct 301 || |||||||||||| || ||||||||||||||||||||||||||||||||| ||| Sbjct: 676 ttcggccacagctgttggagctgagctgacccacagcttctcgagcaacgagaactccct 735 Query: 302 caccttcggcactcagcataccctagacccgctcaccctcgtgaaggctcgcatcaacaa 361 ||||||||| || ||||| || || |||||||| ||| |||||||||| ||| ||||||| Sbjct: 736 caccttcggtacccagcacactctcgacccgcttaccgtcgtgaaggcccgcttcaacaa 795 Query: 362 ctctggcaaggcaagcgcgctgatccagcacgagttcaggccgaagtcgctctgcaccat 421 || |||||||| ||||||||| |||||||||||| ||||| ||||| | || ||||| Sbjct: 796 ttccggcaaggccagcgcgctgctccagcacgagtggaggccaaagtctgtgtggaccat 855 Query: 422 ctcggcggaggtggacaccaaggccatcgagaagagctcgaaggtcggcattgcgattgc 481 ||| || || || |||||||||||||| || |||||||| ||||||||||||||| | || Sbjct: 856 ctcagcagaagttgacaccaaggccattgacaagagctcaaaggtcggcattgcggtggc 915 Query: 482 tctcaagccttgat 495 ||||||||||||| Sbjct: 916 cctcaagccttgat 929
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 240 bits (121), Expect = 5e-60 Identities = 259/305 (84%) Strand = Plus / Plus Query: 191 gaacaacaagggagacagcctcaccgcatcctattaccactttgtggagaagtccagcac 250 ||||||||||||||| || ||||| ||||| ||||||||| ||||| | | || ||| Sbjct: 11754653 gaacaacaagggagatagtctcactgcatcttattaccacattgtgaaccattcggccac 11754712 Query: 251 agctgttggggcggagctgacccacagcttctcgagcaacgagaacagcctcaccttcgg 310 ||||||||| || ||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 11754713 agctgttggagctgagctgacccacagcttctcgagcaacgagaactccctcaccttcgg 11754772 Query: 311 cactcagcataccctagacccgctcaccctcgtgaaggctcgcatcaacaactctggcaa 370 || ||||| || || |||||||| ||| |||||||||| ||| ||||||| || ||||| Sbjct: 11754773 tacccagcacactctcgacccgcttaccgtcgtgaaggcccgcttcaacaattccggcaa 11754832 Query: 371 ggcaagcgcgctgatccagcacgagttcaggccgaagtcgctctgcaccatctcggcgga 430 ||| ||||||||| |||||||||||| ||||| ||||| | || |||||||| || || Sbjct: 11754833 ggccagcgcgctgctccagcacgagtggaggccaaagtctgtgtggaccatctcagcaga 11754892 Query: 431 ggtggacaccaaggccatcgagaagagctcgaaggtcggcattgcgattgctctcaagcc 490 || |||||||||||||| || |||||||| ||||||||||||||| | || |||||||| Sbjct: 11754893 agttgacaccaaggccattgacaagagctcaaaggtcggcattgcggtggccctcaagcc 11754952 Query: 491 ttgat 495 ||||| Sbjct: 11754953 ttgat 11754957 Score = 83.8 bits (42), Expect = 6e-13 Identities = 96/114 (84%) Strand = Plus / Plus Query: 2 tgattatgctggtattaatgcaagcattggcttgactgccaatcctgtagtcaacctctc 61 ||||||||||||| ||| |||||| ||||| |||||||||| |||||||||||| ||||| Sbjct: 11753820 tgattatgctggtgttagtgcaagtattggtttgactgccagtcctgtagtcaatctctc 11753879 Query: 62 tgctgcgtttggaactagtgctctagctgttggtggtgatgtgtcgcttgatac 115 || |||||||| | ||||| |||||||||| |||||| || |||||||| Sbjct: 11753880 cagtgtttttggaaccaaggctcttgctgttggtgctgatgtctcacttgatac 11753933
>dbj|AP005508.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0711F01 Length = 193091 Score = 240 bits (121), Expect = 5e-60 Identities = 259/305 (84%) Strand = Plus / Plus Query: 191 gaacaacaagggagacagcctcaccgcatcctattaccactttgtggagaagtccagcac 250 ||||||||||||||| || ||||| ||||| ||||||||| ||||| | | || ||| Sbjct: 189287 gaacaacaagggagatagtctcactgcatcttattaccacattgtgaaccattcggccac 189346 Query: 251 agctgttggggcggagctgacccacagcttctcgagcaacgagaacagcctcaccttcgg 310 ||||||||| || ||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 189347 agctgttggagctgagctgacccacagcttctcgagcaacgagaactccctcaccttcgg 189406 Query: 311 cactcagcataccctagacccgctcaccctcgtgaaggctcgcatcaacaactctggcaa 370 || ||||| || || |||||||| ||| |||||||||| ||| ||||||| || ||||| Sbjct: 189407 tacccagcacactctcgacccgcttaccgtcgtgaaggcccgcttcaacaattccggcaa 189466 Query: 371 ggcaagcgcgctgatccagcacgagttcaggccgaagtcgctctgcaccatctcggcgga 430 ||| ||||||||| |||||||||||| ||||| ||||| | || |||||||| || || Sbjct: 189467 ggccagcgcgctgctccagcacgagtggaggccaaagtctgtgtggaccatctcagcaga 189526 Query: 431 ggtggacaccaaggccatcgagaagagctcgaaggtcggcattgcgattgctctcaagcc 490 || |||||||||||||| || |||||||| ||||||||||||||| | || |||||||| Sbjct: 189527 agttgacaccaaggccattgacaagagctcaaaggtcggcattgcggtggccctcaagcc 189586 Query: 491 ttgat 495 ||||| Sbjct: 189587 ttgat 189591 Score = 83.8 bits (42), Expect = 6e-13 Identities = 96/114 (84%) Strand = Plus / Plus Query: 2 tgattatgctggtattaatgcaagcattggcttgactgccaatcctgtagtcaacctctc 61 ||||||||||||| ||| |||||| ||||| |||||||||| |||||||||||| ||||| Sbjct: 188454 tgattatgctggtgttagtgcaagtattggtttgactgccagtcctgtagtcaatctctc 188513 Query: 62 tgctgcgtttggaactagtgctctagctgttggtggtgatgtgtcgcttgatac 115 || |||||||| | ||||| |||||||||| |||||| || |||||||| Sbjct: 188514 cagtgtttttggaaccaaggctcttgctgttggtgctgatgtctcacttgatac 188567
>dbj|AK072129.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013126C04, full insert sequence Length = 3071 Score = 240 bits (121), Expect = 5e-60 Identities = 259/305 (84%) Strand = Plus / Plus Query: 191 gaacaacaagggagacagcctcaccgcatcctattaccactttgtggagaagtccagcac 250 ||||||||||||||| || ||||| ||||| ||||||||| ||||| | | || ||| Sbjct: 2558 gaacaacaagggagatagtctcactgcatcttattaccacattgtgaaccattcggccac 2617 Query: 251 agctgttggggcggagctgacccacagcttctcgagcaacgagaacagcctcaccttcgg 310 ||||||||| || ||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 2618 agctgttggagctgagctgacccacagcttctcgagcaacgagaactccctcaccttcgg 2677 Query: 311 cactcagcataccctagacccgctcaccctcgtgaaggctcgcatcaacaactctggcaa 370 || ||||| || || |||||||| ||| |||||||||| ||| ||||||| || ||||| Sbjct: 2678 tacccagcacactctcgacccgcttaccgtcgtgaaggcccgcttcaacaattccggcaa 2737 Query: 371 ggcaagcgcgctgatccagcacgagttcaggccgaagtcgctctgcaccatctcggcgga 430 ||| ||||||||| |||||||||||| ||||| ||||| | || |||||||| || || Sbjct: 2738 ggccagcgcgctgctccagcacgagtggaggccaaagtctgtgtggaccatctcagcaga 2797 Query: 431 ggtggacaccaaggccatcgagaagagctcgaaggtcggcattgcgattgctctcaagcc 490 || |||||||||||||| || |||||||| ||||||||||||||| | || |||||||| Sbjct: 2798 agttgacaccaaggccattgacaagagctcaaaggtcggcattgcggtggccctcaagcc 2857 Query: 491 ttgat 495 ||||| Sbjct: 2858 ttgat 2862 Score = 83.8 bits (42), Expect = 6e-13 Identities = 96/114 (84%) Strand = Plus / Plus Query: 2 tgattatgctggtattaatgcaagcattggcttgactgccaatcctgtagtcaacctctc 61 ||||||||||||| ||| |||||| ||||| |||||||||| |||||||||||| ||||| Sbjct: 1725 tgattatgctggtgttagtgcaagtattggtttgactgccagtcctgtagtcaatctctc 1784 Query: 62 tgctgcgtttggaactagtgctctagctgttggtggtgatgtgtcgcttgatac 115 || |||||||| | ||||| |||||||||| |||||| || |||||||| Sbjct: 1785 cagtgtttttggaaccaaggctcttgctgttggtgctgatgtctcacttgatac 1838
>gb|AF178950.1|AF178950 Zea mays voltage-dependent anion channel protein 1a (vdac1a) mRNA, complete cds; nuclear gene for mitochondrial product Length = 1179 Score = 182 bits (92), Expect = 9e-43 Identities = 194/228 (85%) Strand = Plus / Plus Query: 248 cacagctgttggggcggagctgacccacagcttctcgagcaacgagaacagcctcacctt 307 ||||||||||||||| ||||| |||||||||||||||| ||| || |||| ||||||||| Sbjct: 677 cacagctgttggggcagagcttacccacagcttctcgaccaatgaaaacaccctcacctt 736 Query: 308 cggcactcagcataccctagacccgctcaccctcgtgaaggctcgcatcaacaactctgg 367 ||| ||||| |||| ||||| || ||| || ||||||| ||||| ||||||||||| Sbjct: 737 tggcgggcagcacgccctggacccactaaccgtcttgaaggcccgcattaacaactctgg 796 Query: 368 caaggcaagcgcgctgatccagcacgagttcaggccgaagtcgctctgcaccatctcggc 427 |||||| || || |||||||||||||||| ||||| |||||||| |||||||||||| Sbjct: 797 caaggccagtgccctgatccagcacgagtggaggccaaagtcgctggtcaccatctcggc 856 Query: 428 ggaggtggacaccaaggccatcgagaagagctcgaaggtcggcattgc 475 ||||| ||||| ||| |||||||||||||||||||||| || ||||| Sbjct: 857 cgaggtcgacacaaagaccatcgagaagagctcgaaggttgggattgc 904 Score = 115 bits (58), Expect = 2e-22 Identities = 172/210 (81%) Strand = Plus / Plus Query: 2 tgattatgctggtattaatgcaagcattggcttgactgccaatcctgtagtcaacctctc 61 |||||||||||| ||||||||||||| || |||| ||||||||||||||||||||||| Sbjct: 428 tgattatgctggagttaatgcaagcatcggtctgacagccaatcctgtagtcaacctctc 487 Query: 62 tgctgcgtttggaactagtgctctagctgttggtggtgatgtgtcgcttgatacatccac 121 |||||| ||||| |||| ||| | || |||||| ||| | || |||||||| | || Sbjct: 488 tgctgcctttggtactaaggctgttgcacttggtgccgatatctcacttgatactgcaac 547 Query: 122 caagaatttcaccaaatacaatgctgcgtttagctacactaaccaagatcttatcgcatc 181 ||| || || |||||||||||||| | || | |||| | |||| ||| ||||||| Sbjct: 548 tgggaacttgactaaatacaatgctgcactgaggttcactcatgaagaccttgtcgcatc 607 Query: 182 cctgaacctgaacaacaagggagacagcct 211 |||||||||||||||||||||||||||||| Sbjct: 608 cctgaacctgaacaacaagggagacagcct 637
>gb|AY104870.1| Zea mays PCO081914 mRNA sequence Length = 1445 Score = 182 bits (92), Expect = 9e-43 Identities = 194/228 (85%) Strand = Plus / Plus Query: 248 cacagctgttggggcggagctgacccacagcttctcgagcaacgagaacagcctcacctt 307 ||||||||||||||| ||||| |||||||||||||||| ||| || |||| ||||||||| Sbjct: 788 cacagctgttggggcagagcttacccacagcttctcgaccaatgaaaacaccctcacctt 847 Query: 308 cggcactcagcataccctagacccgctcaccctcgtgaaggctcgcatcaacaactctgg 367 ||| ||||| |||| ||||| || ||| || ||||||| ||||| ||||||||||| Sbjct: 848 tggcgggcagcacgccctggacccactaaccgtcttgaaggcccgcattaacaactctgg 907 Query: 368 caaggcaagcgcgctgatccagcacgagttcaggccgaagtcgctctgcaccatctcggc 427 |||||| || || |||||||||||||||| ||||| |||||||| |||||||||||| Sbjct: 908 caaggccagtgccctgatccagcacgagtggaggccaaagtcgctggtcaccatctcggc 967 Query: 428 ggaggtggacaccaaggccatcgagaagagctcgaaggtcggcattgc 475 ||||| ||||| ||| |||||||||||||||||||||| || ||||| Sbjct: 968 cgaggtcgacacaaagaccatcgagaagagctcgaaggttgggattgc 1015 Score = 123 bits (62), Expect = 7e-25 Identities = 173/210 (82%) Strand = Plus / Plus Query: 2 tgattatgctggtattaatgcaagcattggcttgactgccaatcctgtagtcaacctctc 61 |||||||||||| ||||||||||||| || |||| ||||||||||||||||||||||| Sbjct: 539 tgattatgctggagttaatgcaagcatcggtctgacagccaatcctgtagtcaacctctc 598 Query: 62 tgctgcgtttggaactagtgctctagctgttggtggtgatgtgtcgcttgatacatccac 121 |||||| ||||| |||| ||| | || ||||||| ||| | || |||||||| | || Sbjct: 599 tgctgcctttggtactaaggctgttgcagttggtgccgatatctcacttgatactgcaac 658 Query: 122 caagaatttcaccaaatacaatgctgcgtttagctacactaaccaagatcttatcgcatc 181 ||| || || |||||||||||||| | || | |||| | |||| ||| ||||||| Sbjct: 659 tgggaacttgactaaatacaatgctgcactgaggttcactcatgaagaccttgtcgcatc 718 Query: 182 cctgaacctgaacaacaagggagacagcct 211 |||||||||||||||||||||||||||||| Sbjct: 719 cctgaacctgaacaacaagggagacagcct 748
>gb|BT016491.1| Zea mays clone Contig324 mRNA sequence Length = 1330 Score = 167 bits (84), Expect = 5e-38 Identities = 192/228 (84%) Strand = Plus / Plus Query: 248 cacagctgttggggcggagctgacccacagcttctcgagcaacgagaacagcctcacctt 307 ||||||||||||||| ||||| |||||||| ||||||| ||| || |||| ||||||||| Sbjct: 737 cacagctgttggggcagagcttacccacagtttctcgaccaatgaaaacaccctcacctt 796 Query: 308 cggcactcagcataccctagacccgctcaccctcgtgaaggctcgcatcaacaactctgg 367 ||| ||||| || || ||||| || ||| || ||||||| ||||||||||||||||| Sbjct: 797 tggcgggcagcacactctggacccactaaccgtcttgaaggcacgcatcaacaactctgg 856 Query: 368 caaggcaagcgcgctgatccagcacgagttcaggccgaagtcgctctgcaccatctcggc 427 ||| || ||||| ||||||||||| |||| ||||| |||||||| |||||||||||| Sbjct: 857 caaagccagcgccctgatccagcatgagtggaggccaaagtcgctggtcaccatctcggc 916 Query: 428 ggaggtggacaccaaggccatcgagaagagctcgaaggtcggcattgc 475 ||||| || || ||| |||| |||||||||||||||||||| ||||| Sbjct: 917 tgaggtcgatacaaagaccattgagaagagctcgaaggtcggaattgc 964 Score = 83.8 bits (42), Expect = 6e-13 Identities = 165/206 (80%) Strand = Plus / Plus Query: 2 tgattatgctggtattaatgcaagcattggcttgactgccaatcctgtagtcaacctctc 61 |||||||||||| ||||||||||| || | |||| ||||||||||||| ||||||||| Sbjct: 488 tgattatgctggagttaatgcaagcgttagtctgacagccaatcctgtagccaacctctc 547 Query: 62 tgctgcgtttggaactagtgctctagctgttggtggtgatgtgtcgcttgatacatccac 121 |||||| ||||| |||| ||||| || ||||||| || | || ||||| | |||| Sbjct: 548 tgctgcttttggcactaaggctctcgcagttggtgcagagatctcatttgattctgccac 607 Query: 122 caagaatttcaccaaatacaatgctgcgtttagctacactaaccaagatcttatcgcatc 181 ||| ||||||||||||||||||| || | | |||| | |||| ||||||||||| Sbjct: 608 tgggaacttcaccaaatacaatgctggattgatgttcactcatgaagaccttatcgcatc 667 Query: 182 cctgaacctgaacaacaagggagaca 207 ||| || |||||||||||||||||| Sbjct: 668 ccttaatatgaacaacaagggagaca 693
>gb|BT016888.1| Zea mays clone Contig721 mRNA sequence Length = 1209 Score = 151 bits (76), Expect = 3e-33 Identities = 190/228 (83%) Strand = Plus / Minus Query: 248 cacagctgttggggcggagctgacccacagcttctcgagcaacgagaacagcctcacctt 307 ||||||||||||||| ||||| |||||||||||||||| ||| || |||| |||| |||| Sbjct: 516 cacagctgttggggcagagcttacccacagcttctcgaccaatgaaaacaccctcccctt 457 Query: 308 cggcactcagcataccctagacccgctcaccctcgtgaaggctcgcatcaacaactctgg 367 ||| ||||| |||| ||||| || || || ||||||| ||||| ||||||||||| Sbjct: 456 tggcgggcagcacgccctggaccccctacccgtcttgaaggcccgcattaacaactctgg 397 Query: 368 caaggcaagcgcgctgatccagcacgagttcaggccgaagtcgctctgcaccatctcggc 427 |||||| || || |||||||||||||||| ||||| |||||||| | |||||||||| Sbjct: 396 caaggccagtgccctgatccagcacgagtggaggccaaagtcgctggtccccatctcggc 337 Query: 428 ggaggtggacaccaaggccatcgagaagagctcgaaggtcggcattgc 475 ||||| ||| | ||| |||||||||||||||||||||| || ||||| Sbjct: 336 cgaggtcgacccaaagcccatcgagaagagctcgaaggttgggattgc 289 Score = 107 bits (54), Expect = 4e-20 Identities = 171/210 (81%) Strand = Plus / Minus Query: 2 tgattatgctggtattaatgcaagcattggcttgactgccaatcctgtagtcaacctctc 61 |||||||||||| ||||||||||||| || |||| ||||||||||||||||||||||| Sbjct: 765 tgattatgctggagttaatgcaagcatcggtctgacagccaatcctgtagtcaacctctc 706 Query: 62 tgctgcgtttggaactagtgctctagctgttggtggtgatgtgtcgcttgatacatccac 121 |||||| ||||| |||| ||| | || ||||||| ||| | || |||||||| | || Sbjct: 705 tgctgcctttggtactaaggctgttgcagttggtgccgatatctcacttgatactgcaac 646 Query: 122 caagaatttcaccaaatacaatgctgcgtttagctacactaaccaagatcttatcgcatc 181 ||| || || |||||||||||||| | || | |||| | |||| ||| ||||||| Sbjct: 645 tgggaacttgactaaatacaatgctgcactgaggttcactcatgaagaccttgtcgcatc 586 Query: 182 cctgaacctgaacaacaagggagacagcct 211 ||||||||||||||||||||| | |||||| Sbjct: 585 cctgaacctgaacaacaagggcgccagcct 556
>ref|XM_475771.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 843 Score = 149 bits (75), Expect = 1e-32 Identities = 180/215 (83%) Strand = Plus / Plus Query: 252 gctgttggggcggagctgacccacagcttctcgagcaacgagaacagcctcaccttcggc 311 |||||||| || |||||| | ||||||||||||||||||||||||| ||||||||||| Sbjct: 601 gctgttggagcagagctggctcacagcttctcgagcaacgagaacactctcaccttcggg 660 Query: 312 actcagcataccctagacccgctcaccctcgtgaaggctcgcatcaacaactctggcaag 371 || |||||| |||| || ||||| |||||||| ||| ||||||||| ||||| | Sbjct: 661 acacagcatgccctggatgaactcactactgtgaaggcgcgcttcaacaactttggcatg 720 Query: 372 gcaagcgcgctgatccagcacgagttcaggccgaagtcgctctgcaccatctcggcggag 431 || || ||||| |||||||||||||||||||| ||||||||| ||||||||| | ||| Sbjct: 721 gccagtgcgctcatccagcacgagttcaggcccaagtcgctcgtcaccatctccactgag 780 Query: 432 gtggacaccaaggccatcgagaagagctcgaaggt 466 || || |||||||||||||| |||||||| ||||| Sbjct: 781 gttgataccaaggccatcgacaagagctccaaggt 815 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 189 ctgaacaacaagggagacagcct 211 ||||||||||||||||||||||| Sbjct: 541 ctgaacaacaagggagacagcct 563
>gb|AC097112.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1741_B01, complete sequence Length = 147704 Score = 149 bits (75), Expect = 1e-32 Identities = 180/215 (83%) Strand = Plus / Plus Query: 252 gctgttggggcggagctgacccacagcttctcgagcaacgagaacagcctcaccttcggc 311 |||||||| || |||||| | ||||||||||||||||||||||||| ||||||||||| Sbjct: 68832 gctgttggagcagagctggctcacagcttctcgagcaacgagaacactctcaccttcggg 68891 Query: 312 actcagcataccctagacccgctcaccctcgtgaaggctcgcatcaacaactctggcaag 371 || |||||| |||| || ||||| |||||||| ||| ||||||||| ||||| | Sbjct: 68892 acacagcatgccctggatgaactcactactgtgaaggcgcgcttcaacaactttggcatg 68951 Query: 372 gcaagcgcgctgatccagcacgagttcaggccgaagtcgctctgcaccatctcggcggag 431 || || ||||| |||||||||||||||||||| ||||||||| ||||||||| | ||| Sbjct: 68952 gccagtgcgctcatccagcacgagttcaggcccaagtcgctcgtcaccatctccactgag 69011 Query: 432 gtggacaccaaggccatcgagaagagctcgaaggt 466 || || |||||||||||||| |||||||| ||||| Sbjct: 69012 gttgataccaaggccatcgacaagagctccaaggt 69046 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 191 gaacaacaagggagacagcct 211 ||||||||||||||||||||| Sbjct: 68774 gaacaacaagggagacagcct 68794
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 149 bits (75), Expect = 1e-32 Identities = 180/215 (83%) Strand = Plus / Plus Query: 252 gctgttggggcggagctgacccacagcttctcgagcaacgagaacagcctcaccttcggc 311 |||||||| || |||||| | ||||||||||||||||||||||||| ||||||||||| Sbjct: 26424141 gctgttggagcagagctggctcacagcttctcgagcaacgagaacactctcaccttcggg 26424200 Query: 312 actcagcataccctagacccgctcaccctcgtgaaggctcgcatcaacaactctggcaag 371 || |||||| |||| || ||||| |||||||| ||| ||||||||| ||||| | Sbjct: 26424201 acacagcatgccctggatgaactcactactgtgaaggcgcgcttcaacaactttggcatg 26424260 Query: 372 gcaagcgcgctgatccagcacgagttcaggccgaagtcgctctgcaccatctcggcggag 431 || || ||||| |||||||||||||||||||| ||||||||| ||||||||| | ||| Sbjct: 26424261 gccagtgcgctcatccagcacgagttcaggcccaagtcgctcgtcaccatctccactgag 26424320 Query: 432 gtggacaccaaggccatcgagaagagctcgaaggt 466 || || |||||||||||||| |||||||| ||||| Sbjct: 26424321 gttgataccaaggccatcgacaagagctccaaggt 26424355 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 191 gaacaacaagggagacagcct 211 ||||||||||||||||||||| Sbjct: 26424083 gaacaacaagggagacagcct 26424103 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 191 gaacaacaagggagacagcct 211 ||||||||||||||||||||| Sbjct: 25619625 gaacaacaagggagacagcct 25619645
>emb|AJ251562.1|OSA251562 Oryza sativa mRNA for voltage-dependent anion channel (VDAC2 gene) Length = 1189 Score = 149 bits (75), Expect = 1e-32 Identities = 180/215 (83%) Strand = Plus / Plus Query: 252 gctgttggggcggagctgacccacagcttctcgagcaacgagaacagcctcaccttcggc 311 |||||||| || |||||| | ||||||||||||||||||||||||| ||||||||||| Sbjct: 640 gctgttggagcagagctggctcacagcttctcgagcaacgagaacactctcaccttcggg 699 Query: 312 actcagcataccctagacccgctcaccctcgtgaaggctcgcatcaacaactctggcaag 371 || |||||| |||| || ||||| |||||||| ||| ||||||||| ||||| | Sbjct: 700 acacagcatgccctggatgaactcactactgtgaaggcgcgcttcaacaactttggcatg 759 Query: 372 gcaagcgcgctgatccagcacgagttcaggccgaagtcgctctgcaccatctcggcggag 431 || || ||||| |||||||||||||||||||| ||||||||| ||||||||| | ||| Sbjct: 760 gccagtgcgctcatccagcacgagttcaggcccaagtcgctcgtcaccatctccactgag 819 Query: 432 gtggacaccaaggccatcgagaagagctcgaaggt 466 || || |||||||||||||| |||||||| ||||| Sbjct: 820 gttgataccaaggccatcgacaagagctccaaggt 854 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 189 ctgaacaacaagggagacagcct 211 ||||||||||||||||||||||| Sbjct: 580 ctgaacaacaagggagacagcct 602
>dbj|AK071833.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023121K13, full insert sequence Length = 1231 Score = 149 bits (75), Expect = 1e-32 Identities = 180/215 (83%) Strand = Plus / Plus Query: 252 gctgttggggcggagctgacccacagcttctcgagcaacgagaacagcctcaccttcggc 311 |||||||| || |||||| | ||||||||||||||||||||||||| ||||||||||| Sbjct: 684 gctgttggagcagagctggctcacagcttctcgagcaacgagaacactctcaccttcggg 743 Query: 312 actcagcataccctagacccgctcaccctcgtgaaggctcgcatcaacaactctggcaag 371 || |||||| |||| || ||||| |||||||| ||| ||||||||| ||||| | Sbjct: 744 acacagcatgccctggatgaactcactactgtgaaggcgcgcttcaacaactttggcatg 803 Query: 372 gcaagcgcgctgatccagcacgagttcaggccgaagtcgctctgcaccatctcggcggag 431 || || ||||| |||||||||||||||||||| ||||||||| ||||||||| | ||| Sbjct: 804 gccagtgcgctcatccagcacgagttcaggcccaagtcgctcgtcaccatctccactgag 863 Query: 432 gtggacaccaaggccatcgagaagagctcgaaggt 466 || || |||||||||||||| |||||||| ||||| Sbjct: 864 gttgataccaaggccatcgacaagagctccaaggt 898 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 189 ctgaacaacaagggagacagcct 211 ||||||||||||||||||||||| Sbjct: 624 ctgaacaacaagggagacagcct 646
>gb|AF178951.1|AF178951 Zea mays voltage-dependent anion channel protein 1b (vdac1b) mRNA, complete cds; nuclear gene for mitochondrial product Length = 1175 Score = 143 bits (72), Expect = 8e-31 Identities = 189/228 (82%) Strand = Plus / Plus Query: 248 cacagctgttggggcggagctgacccacagcttctcgagcaacgagaacagcctcacctt 307 ||||||||||||||| ||||| |||||||| ||||||| ||| || |||| ||||||||| Sbjct: 732 cacagctgttggggcagagcttacccacagtttctcgaccaatgaaaacaccctcacctt 791 Query: 308 cggcactcagcataccctagacccgctcaccctcgtgaaggctcgcatcaacaactctgg 367 ||| ||||| || || ||||| || ||| || ||||||| |||||||||||||| || Sbjct: 792 tggcgggcagcacactctggacccactaaccgtcttgaaggcacgcatcaacaactcggg 851 Query: 368 caaggcaagcgcgctgatccagcacgagttcaggccgaagtcgctctgcaccatctcggc 427 ||| || |||| ||||||||||| |||| ||||| |||||||| |||||||||||| Sbjct: 852 caaagccagcgtcctgatccagcatgagtggaggccaaagtcgctggtcaccatctcggc 911 Query: 428 ggaggtggacaccaaggccatcgagaagagctcgaaggtcggcattgc 475 ||||| || || ||| |||| ||||||||||||||||| || ||||| Sbjct: 912 tgaggtcgatacaaagaccattgagaagagctcgaaggttggaattgc 959 Score = 75.8 bits (38), Expect = 2e-10 Identities = 164/206 (79%) Strand = Plus / Plus Query: 2 tgattatgctggtattaatgcaagcattggcttgactgccaatcctgtagtcaacctctc 61 |||||||||||| ||||||||||| || | |||| ||||||||||||| ||||||||| Sbjct: 483 tgattatgctggagttaatgcaagcgttagtctgacagccaatcctgtagccaacctctc 542 Query: 62 tgctgcgtttggaactagtgctctagctgttggtggtgatgtgtcgcttgatacatccac 121 ||||| ||||| |||| ||||| || ||||||| || | || ||||| | |||| Sbjct: 543 tgctggctttggcactaaggctctcgcagttggtgcagaaatctcatttgattctgccac 602 Query: 122 caagaatttcaccaaatacaatgctgcgtttagctacactaaccaagatcttatcgcatc 181 ||| ||||||||||||||||||| || | | |||| | |||| ||||||||||| Sbjct: 603 tgggaacttcaccaaatacaatgctggattgatgttcactcatgaagaccttatcgcatc 662 Query: 182 cctgaacctgaacaacaagggagaca 207 ||| || |||||||||||||||||| Sbjct: 663 ccttaatatgaacaacaagggagaca 688
>gb|AF178952.1|AF178952 Zea mays voltage-dependent anion channel protein 2 (vdac2) mRNA, complete cds; nuclear gene for mitochondrial product Length = 1129 Score = 135 bits (68), Expect = 2e-28 Identities = 167/200 (83%) Strand = Plus / Plus Query: 267 ctgacccacagcttctcgagcaacgagaacagcctcaccttcggcactcagcatacccta 326 |||| |||||||||||||| ||||| ||||| | ||||||| || || |||||| |||| Sbjct: 690 ctgagccacagcttctcgaccaacgggaacaccatcacctttgggacgcagcatgccctg 749 Query: 327 gacccgctcaccctcgtgaaggctcgcatcaacaactctggcaaggcaagcgcgctgatc 386 ||||| || ||| |||||||| ||| ||||||||| |||| |||||| || |||||| Sbjct: 750 gaccctctgaccactgtgaaggcacgcttcaacaactacggcatggcaagtgcactgatc 809 Query: 387 cagcacgagttcaggccgaagtcgctctgcaccatctcggcggaggtggacaccaaggcc 446 || ||||||| ||||| ||||| || ||||||||| |||||||||||||||||||| Sbjct: 810 caacacgagtggaggcccaagtcactggtcaccatctccacggaggtggacaccaaggcc 869 Query: 447 atcgagaagagctcgaaggt 466 |||||||||||||| ||||| Sbjct: 870 atcgagaagagctctaaggt 889
>gb|AY104198.1| Zea mays PCO099812 mRNA sequence Length = 1156 Score = 135 bits (68), Expect = 2e-28 Identities = 167/200 (83%) Strand = Plus / Plus Query: 267 ctgacccacagcttctcgagcaacgagaacagcctcaccttcggcactcagcatacccta 326 |||| |||||||||||||| ||||| ||||| | ||||||| || || |||||| |||| Sbjct: 724 ctgagccacagcttctcgaccaacgggaacaccatcacctttgggacgcagcatgccctg 783 Query: 327 gacccgctcaccctcgtgaaggctcgcatcaacaactctggcaaggcaagcgcgctgatc 386 ||||| || ||| |||||||| ||| ||||||||| |||| |||||| || |||||| Sbjct: 784 gaccctctgaccactgtgaaggcacgcttcaacaactacggcatggcaagtgcactgatc 843 Query: 387 cagcacgagttcaggccgaagtcgctctgcaccatctcggcggaggtggacaccaaggcc 446 || ||||||| ||||| ||||| || ||||||||| |||||||||||||||||||| Sbjct: 844 caacacgagtggaggcccaagtcactggtcaccatctccacggaggtggacaccaaggcc 903 Query: 447 atcgagaagagctcgaaggt 466 |||||||||||||| ||||| Sbjct: 904 atcgagaagagctctaaggt 923
>ref|NM_191753.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 954 Score = 73.8 bits (37), Expect = 6e-10 Identities = 118/145 (81%) Strand = Plus / Plus Query: 252 gctgttggggcggagctgacccacagcttctcgagcaacgagaacagcctcaccttcggc 311 |||| ||| ||||||||||||||||||||||||| ||| ||||||| ||||| |||||| Sbjct: 712 gctgctggagcggagctgacccacagcttctcgaccaaggagaacaccctcagcttcggg 771 Query: 312 actcagcataccctagacccgctcaccctcgtgaaggctcgcatcaacaactctggcaag 371 | ||||| |||| ||||| ||||| ||||||||| ||| ||||||| |||| | Sbjct: 772 atgcagcacgccctggaccctctcactaccgtgaaggcgcgctacaacaaccacggcatg 831 Query: 372 gcaagcgcgctgatccagcacgagt 396 | ||||| || ||||||||||||| Sbjct: 832 gtcagcgccctcatccagcacgagt 856
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 73.8 bits (37), Expect = 6e-10 Identities = 118/145 (81%) Strand = Plus / Minus Query: 252 gctgttggggcggagctgacccacagcttctcgagcaacgagaacagcctcaccttcggc 311 |||| ||| ||||||||||||||||||||||||| ||| ||||||| ||||| |||||| Sbjct: 29763980 gctgctggagcggagctgacccacagcttctcgaccaaggagaacaccctcagcttcggg 29763921 Query: 312 actcagcataccctagacccgctcaccctcgtgaaggctcgcatcaacaactctggcaag 371 | ||||| |||| ||||| ||||| ||||||||| ||| ||||||| |||| | Sbjct: 29763920 atgcagcacgccctggaccctctcactaccgtgaaggcgcgctacaacaaccacggcatg 29763861 Query: 372 gcaagcgcgctgatccagcacgagt 396 | ||||| || ||||||||||||| Sbjct: 29763860 gtcagcgccctcatccagcacgagt 29763836 Score = 52.0 bits (26), Expect = 0.002 Identities = 98/122 (80%) Strand = Plus / Minus Query: 342 gtgaaggctcgcatcaacaactctggcaaggcaagcgcgctgatccagcacgagttcagg 401 |||||||||||| ||||||||| ||||| ||| |||||||| ||||||| || | | Sbjct: 22904808 gtgaaggctcgcttcaacaactatggcatggccagcgcgctcgtccagcatgaatggcgt 22904749 Query: 402 ccgaagtcgctctgcaccatctcggcggaggtggacaccaaggccatcgagaagagctcg 461 || || ||||| ||||||||| | ||||| ||||||||||| || ||||||||| || Sbjct: 22904748 cccaaatcgctaatcaccatctctggtgaggttgacaccaaggcaattgagaagagcacg 22904689 Query: 462 aa 463 || Sbjct: 22904688 aa 22904687
>dbj|AP003288.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0683B11 Length = 155955 Score = 73.8 bits (37), Expect = 6e-10 Identities = 118/145 (81%) Strand = Plus / Minus Query: 252 gctgttggggcggagctgacccacagcttctcgagcaacgagaacagcctcaccttcggc 311 |||| ||| ||||||||||||||||||||||||| ||| ||||||| ||||| |||||| Sbjct: 8075 gctgctggagcggagctgacccacagcttctcgaccaaggagaacaccctcagcttcggg 8016 Query: 312 actcagcataccctagacccgctcaccctcgtgaaggctcgcatcaacaactctggcaag 371 | ||||| |||| ||||| ||||| ||||||||| ||| ||||||| |||| | Sbjct: 8015 atgcagcacgccctggaccctctcactaccgtgaaggcgcgctacaacaaccacggcatg 7956 Query: 372 gcaagcgcgctgatccagcacgagt 396 | ||||| || ||||||||||||| Sbjct: 7955 gtcagcgccctcatccagcacgagt 7931
>dbj|AP003408.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1131B07 Length = 109135 Score = 73.8 bits (37), Expect = 6e-10 Identities = 118/145 (81%) Strand = Plus / Minus Query: 252 gctgttggggcggagctgacccacagcttctcgagcaacgagaacagcctcaccttcggc 311 |||| ||| ||||||||||||||||||||||||| ||| ||||||| ||||| |||||| Sbjct: 93711 gctgctggagcggagctgacccacagcttctcgaccaaggagaacaccctcagcttcggg 93652 Query: 312 actcagcataccctagacccgctcaccctcgtgaaggctcgcatcaacaactctggcaag 371 | ||||| |||| ||||| ||||| ||||||||| ||| ||||||| |||| | Sbjct: 93651 atgcagcacgccctggaccctctcactaccgtgaaggcgcgctacaacaaccacggcatg 93592 Query: 372 gcaagcgcgctgatccagcacgagt 396 | ||||| || ||||||||||||| Sbjct: 93591 gtcagcgccctcatccagcacgagt 93567
>gb|AY316737.1| Lotus corniculatus var. japonicus VDAC1.1 mRNA, complete cds Length = 1203 Score = 60.0 bits (30), Expect = 9e-06 Identities = 162/206 (78%) Strand = Plus / Plus Query: 252 gctgttggggcggagctgacccacagcttctcgagcaacgagaacagcctcaccttcggc 311 ||||||||||| ||| |||||||||| ||||| | || ||||||| ||||||| | ||| Sbjct: 668 gctgttggggctgaggtgacccacaggttctcaactaatgagaacaccctcacccttggc 727 Query: 312 actcagcataccctagacccgctcaccctcgtgaaggctcgcatcaacaactctggcaag 371 || |||||| | | ||||| | ||| |||| ||||| ||||||||| |||||| Sbjct: 728 acccagcatgcattggacccattgaccacattgaaagctcgtgtcaacaacttcggcaag 787 Query: 372 gcaagcgcgctgatccagcacgagttcaggccgaagtcgctctgcaccatctcggcggag 431 ||||| || || ||||||||||||| | || ||||| ||| |||||||| | |||| Sbjct: 788 gcaagtgctctcatccagcacgagtggcgccctaagtcattctttaccatctctggggag 847 Query: 432 gtggacaccaaggccatcgagaagag 457 || |||||||||||||| || ||||| Sbjct: 848 gtagacaccaaggccattgaaaagag 873
>dbj|AP006116.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT40C04, TM0199, complete sequence Length = 123325 Score = 60.0 bits (30), Expect = 9e-06 Identities = 162/206 (78%) Strand = Plus / Minus Query: 252 gctgttggggcggagctgacccacagcttctcgagcaacgagaacagcctcaccttcggc 311 ||||||||||| ||| |||||||||| ||||| | || ||||||| ||||||| | ||| Sbjct: 119693 gctgttggggctgaggtgacccacaggttctcaactaatgagaacaccctcacccttggc 119634 Query: 312 actcagcataccctagacccgctcaccctcgtgaaggctcgcatcaacaactctggcaag 371 || |||||| | | ||||| | ||| |||| ||||| ||||||||| |||||| Sbjct: 119633 acccagcatgcattggacccattgaccacattgaaagctcgtgtcaacaacttcggcaag 119574 Query: 372 gcaagcgcgctgatccagcacgagttcaggccgaagtcgctctgcaccatctcggcggag 431 ||||| || || ||||||||||||| | || ||||| ||| |||||||| | |||| Sbjct: 119573 gcaagtgctctcatccagcacgagtggcgccctaagtcattctttaccatctctggggag 119514 Query: 432 gtggacaccaaggccatcgagaagag 457 || |||||||||||||| || ||||| Sbjct: 119513 gtagacaccaaggccattgaaaagag 119488
>dbj|AP004901.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT13M13, TM0051b, complete sequence Length = 54022 Score = 60.0 bits (30), Expect = 9e-06 Identities = 162/206 (78%) Strand = Plus / Plus Query: 252 gctgttggggcggagctgacccacagcttctcgagcaacgagaacagcctcaccttcggc 311 ||||||||||| ||| |||||||||| ||||| | || ||||||| ||||||| | ||| Sbjct: 8525 gctgttggggctgaggtgacccacaggttctcaactaatgagaacaccctcacccttggc 8584 Query: 312 actcagcataccctagacccgctcaccctcgtgaaggctcgcatcaacaactctggcaag 371 || |||||| | | ||||| | ||| |||| ||||| ||||||||| |||||| Sbjct: 8585 acccagcatgcattggacccattgaccacattgaaagctcgtgtcaacaacttcggcaag 8644 Query: 372 gcaagcgcgctgatccagcacgagttcaggccgaagtcgctctgcaccatctcggcggag 431 ||||| || || ||||||||||||| | || ||||| ||| |||||||| | |||| Sbjct: 8645 gcaagtgctctcatccagcacgagtggcgccctaagtcattctttaccatctctggggag 8704 Query: 432 gtggacaccaaggccatcgagaagag 457 || |||||||||||||| || ||||| Sbjct: 8705 gtagacaccaaggccattgaaaagag 8730
>emb|X82149.1|TAVDAC2 T.aestivum VDAC2 mRNA for voltage dependent anion channel Length = 1174 Score = 54.0 bits (27), Expect = 6e-04 Identities = 72/87 (82%) Strand = Plus / Plus Query: 372 gcaagcgcgctgatccagcacgagttcaggccgaagtcgctctgcaccatctcggcggag 431 ||||| ||||| |||||||||| || ||||| ||||| ||| |||| |||| | ||| Sbjct: 700 gcaagtgcgctcatccagcacgcgtggaggcccaagtctctcatcaccttctccaccgag 759 Query: 432 gtggacaccaaggccatcgagaagagc 458 || |||||||||||||| ||||||||| Sbjct: 760 gttgacaccaaggccattgagaagagc 786 Score = 50.1 bits (25), Expect = 0.009 Identities = 61/73 (83%) Strand = Plus / Plus Query: 129 ttcaccaaatacaatgctgcgtttagctacactaaccaagatcttatcgcatccctgaac 188 |||||||| |||||||||| | ||| |||||||||||||||||| || || |||| Sbjct: 460 ttcaccaagtacaatgctggactgagccacactaaccaagatcttactgcttcgttgaat 519 Query: 189 ctgaacaacaagg 201 ||||||||||||| Sbjct: 520 ctgaacaacaagg 532 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 273 cacagcttctcgagcaacgagaaca 297 ||||||||||| ||||||||||||| Sbjct: 601 cacagcttctcaagcaacgagaaca 625
>gb|U50900.1|SOU50900 Spinacia oleracea voltage-dependent anion channel protein (SVDAC1) mRNA, complete cds Length = 1180 Score = 54.0 bits (27), Expect = 6e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 248 cacagctgttggggcggagctgacccacagcttctcgag 286 |||||||||||| |||||| ||| ||||||||||||||| Sbjct: 649 cacagctgttggcgcggagttgagccacagcttctcgag 687
>ref|NM_192554.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 828 Score = 52.0 bits (26), Expect = 0.002 Identities = 98/122 (80%) Strand = Plus / Plus Query: 342 gtgaaggctcgcatcaacaactctggcaaggcaagcgcgctgatccagcacgagttcagg 401 |||||||||||| ||||||||| ||||| ||| |||||||| ||||||| || | | Sbjct: 676 gtgaaggctcgcttcaacaactatggcatggccagcgcgctcgtccagcatgaatggcgt 735 Query: 402 ccgaagtcgctctgcaccatctcggcggaggtggacaccaaggccatcgagaagagctcg 461 || || ||||| ||||||||| | ||||| ||||||||||| || ||||||||| || Sbjct: 736 cccaaatcgctaatcaccatctctggtgaggttgacaccaaggcaattgagaagagcacg 795 Query: 462 aa 463 || Sbjct: 796 aa 797
>gb|BT014102.1| Lycopersicon esculentum clone 133206R, mRNA sequence Length = 1133 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 248 cacagctgttggggcggagctgacccacagcttctcgagcaacgagaaca 297 |||||||||||| || ||| |||| ||||||||||| ||||| ||||||| Sbjct: 660 cacagctgttggtgcagagttgactcacagcttctcaagcaatgagaaca 709
>gb|AC137994.19| Medicago truncatula clone mth2-23f15, complete sequence Length = 131563 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 343 tgaaggctcgcatcaacaactctggcaaggcaagcgcgctgatccagcacgagt 396 |||||| |||||||| |||||| | ||||||||| || || ||||||||||||| Sbjct: 72130 tgaagggtcgcatcaccaactcagccaaggcaagtgcccttatccagcacgagt 72077
>emb|X80388.1|STPORIN3 S.tuberosum pPOM36I mRNA for 36kDA porinI Length = 1030 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 248 cacagctgttggggcggagctgacccacagcttctcgagcaacgagaaca 297 |||||||||||| || ||| |||| ||||||||||| ||||| ||||||| Sbjct: 588 cacagctgttggtgcagagttgactcacagcttctcaagcaatgagaaca 637
>emb|X80387.1|STPORIN2 S.tuberosum pPOM36II mRNA for 36kDa porinII Length = 1060 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 248 cacagctgttggggcggagctgacccacagcttctcgagcaacgagaaca 297 |||||||||||| || ||| |||| ||||||||||| ||||| ||||||| Sbjct: 628 cacagctgttggtgcagagttgactcacagcttctcaagcaatgagaaca 677
>dbj|AP003300.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0700A11 Length = 136321 Score = 52.0 bits (26), Expect = 0.002 Identities = 98/122 (80%) Strand = Plus / Minus Query: 342 gtgaaggctcgcatcaacaactctggcaaggcaagcgcgctgatccagcacgagttcagg 401 |||||||||||| ||||||||| ||||| ||| |||||||| ||||||| || | | Sbjct: 108365 gtgaaggctcgcttcaacaactatggcatggccagcgcgctcgtccagcatgaatggcgt 108306 Query: 402 ccgaagtcgctctgcaccatctcggcggaggtggacaccaaggccatcgagaagagctcg 461 || || ||||| ||||||||| | ||||| ||||||||||| || ||||||||| || Sbjct: 108305 cccaaatcgctaatcaccatctctggtgaggttgacaccaaggcaattgagaagagcacg 108246 Query: 462 aa 463 || Sbjct: 108245 aa 108244
>emb|AJ251563.1|OSA251563 Oryza sativa mRNA for voltage-dependent anion channel (VDAC3 gene) Length = 1148 Score = 52.0 bits (26), Expect = 0.002 Identities = 98/122 (80%) Strand = Plus / Plus Query: 342 gtgaaggctcgcatcaacaactctggcaaggcaagcgcgctgatccagcacgagttcagg 401 |||||||||||| ||||||||| ||||| ||| |||||||| ||||||| || | | Sbjct: 749 gtgaaggctcgcttcaacaactatggcatggccagcgcgctcgtccagcatgaatggcgt 808 Query: 402 ccgaagtcgctctgcaccatctcggcggaggtggacaccaaggccatcgagaagagctcg 461 || || ||||| ||||||||| | ||||| ||||||||||| || ||||||||| || Sbjct: 809 cccaaatcgctaatcaccatctctggtgaggttgacaccaaggcaattgagaagagcacg 868 Query: 462 aa 463 || Sbjct: 869 aa 870
>dbj|AK104419.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-205-B06, full insert sequence Length = 1151 Score = 52.0 bits (26), Expect = 0.002 Identities = 98/122 (80%) Strand = Plus / Plus Query: 342 gtgaaggctcgcatcaacaactctggcaaggcaagcgcgctgatccagcacgagttcagg 401 |||||||||||| ||||||||| ||||| ||| |||||||| ||||||| || | | Sbjct: 754 gtgaaggctcgcttcaacaactatggcatggccagcgcgctcgtccagcatgaatggcgt 813 Query: 402 ccgaagtcgctctgcaccatctcggcggaggtggacaccaaggccatcgagaagagctcg 461 || || ||||| ||||||||| | ||||| ||||||||||| || ||||||||| || Sbjct: 814 cccaaatcgctaatcaccatctctggtgaggttgacaccaaggcaattgagaagagcacg 873 Query: 462 aa 463 || Sbjct: 874 aa 875
>dbj|AK104055.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-B09, full insert sequence Length = 1160 Score = 52.0 bits (26), Expect = 0.002 Identities = 98/122 (80%) Strand = Plus / Plus Query: 342 gtgaaggctcgcatcaacaactctggcaaggcaagcgcgctgatccagcacgagttcagg 401 |||||||||||| ||||||||| ||||| ||| |||||||| ||||||| || | | Sbjct: 765 gtgaaggctcgcttcaacaactatggcatggccagcgcgctcgtccagcatgaatggcgt 824 Query: 402 ccgaagtcgctctgcaccatctcggcggaggtggacaccaaggccatcgagaagagctcg 461 || || ||||| ||||||||| | ||||| ||||||||||| || ||||||||| || Sbjct: 825 cccaaatcgctaatcaccatctctggtgaggttgacaccaaggcaattgagaagagcacg 884 Query: 462 aa 463 || Sbjct: 885 aa 886
>dbj|AK070745.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023068C08, full insert sequence Length = 1216 Score = 52.0 bits (26), Expect = 0.002 Identities = 98/122 (80%) Strand = Plus / Plus Query: 342 gtgaaggctcgcatcaacaactctggcaaggcaagcgcgctgatccagcacgagttcagg 401 |||||||||||| ||||||||| ||||| ||| |||||||| ||||||| || | | Sbjct: 809 gtgaaggctcgcttcaacaactatggcatggccagcgcgctcgtccagcatgaatggcgt 868 Query: 402 ccgaagtcgctctgcaccatctcggcggaggtggacaccaaggccatcgagaagagctcg 461 || || ||||| ||||||||| | ||||| ||||||||||| || ||||||||| || Sbjct: 869 cccaaatcgctaatcaccatctctggtgaggttgacaccaaggcaattgagaagagcacg 928 Query: 462 aa 463 || Sbjct: 929 aa 930
>gb|AY316738.1| Lotus corniculatus var. japonicus VDAC1.2 mRNA, complete cds Length = 1103 Score = 46.1 bits (23), Expect = 0.14 Identities = 47/55 (85%) Strand = Plus / Plus Query: 342 gtgaaggctcgcatcaacaactctggcaaggcaagcgcgctgatccagcacgagt 396 |||||||||||| |||||||| ||||||||||| || || |||||||| |||| Sbjct: 706 gtgaaggctcgcgtcaacaaccttggcaaggcaaatgctcttatccagcatgagt 760
>dbj|AP006692.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT06K23, TM0391, complete sequence Length = 98505 Score = 46.1 bits (23), Expect = 0.14 Identities = 47/55 (85%) Strand = Plus / Plus Query: 342 gtgaaggctcgcatcaacaactctggcaaggcaagcgcgctgatccagcacgagt 396 |||||||||||| |||||||| ||||||||||| || || |||||||| |||| Sbjct: 30896 gtgaaggctcgcgtcaacaaccttggcaaggcaaatgctcttatccagcatgagt 30950
>dbj|AB033632.1| Meriones unguiculatus TP53 mRNA for p53, complete cds Length = 1173 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 257 tggggcggagctgacccacagct 279 ||||||||||||||||||||||| Sbjct: 432 tggggcggagctgacccacagct 410
>gb|AC132491.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0599F04, complete sequence Length = 169073 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 191 gaacaacaagggagacagcct 211 ||||||||||||||||||||| Sbjct: 136032 gaacaacaagggagacagcct 136052
>gb|AC130611.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0483D07, complete sequence Length = 147122 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 191 gaacaacaagggagacagcct 211 ||||||||||||||||||||| Sbjct: 31994 gaacaacaagggagacagcct 32014
>gb|AC108726.9| Homo sapiens 3 BAC RP11-385G14 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 36019 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 506 agccctctcttttctgaactc 526 ||||||||||||||||||||| Sbjct: 24244 agccctctcttttctgaactc 24224
>gb|AF411849.1|AF411849S1 Homo sapiens USH3 region, partial sequence Length = 198334 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 506 agccctctcttttctgaactc 526 ||||||||||||||||||||| Sbjct: 92930 agccctctcttttctgaactc 92910
>gb|DQ072165.1| Phaseolus coccineus mitochrondrial voltage-dependent anion-selective channel mRNA, complete cds; nuclear gene for mitochondrial product Length = 831 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 429 gaggtggacaccaaggccatcgagaagag 457 ||||| |||||||||||||| |||||||| Sbjct: 766 gaggtagacaccaaggccattgagaagag 794
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 179 atccctgaacctgaacaacaa 199 ||||||||||||||||||||| Sbjct: 3828902 atccctgaacctgaacaacaa 3828882
>gb|AC110214.7| Mus musculus chromosome 8, clone RP24-485L5, complete sequence Length = 213387 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 226 accactttgtggagaagtcc 245 |||||||||||||||||||| Sbjct: 55294 accactttgtggagaagtcc 55313
>gb|BC070001.1| Danio rerio POU domain gene 12, mRNA (cDNA clone MGC:85606 IMAGE:6963958), complete cds Length = 2881 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 404 gaagtcgctctgcaccatct 423 |||||||||||||||||||| Sbjct: 774 gaagtcgctctgcaccatct 755
>gb|BT012680.1| Lycopersicon esculentum clone 113526R, mRNA sequence Length = 1095 Score = 40.1 bits (20), Expect = 8.4 Identities = 56/68 (82%) Strand = Plus / Plus Query: 252 gctgttggggcggagctgacccacagcttctcgagcaacgagaacagcctcaccttcggc 311 ||||||||||| ||| ||| ||||||||||| | ||| ||||||| | ||||| | || Sbjct: 638 gctgttggggctgaggtgaatcacagcttctctaccaatgagaacatcatcaccgtgggt 697 Query: 312 actcagca 319 |||||||| Sbjct: 698 actcagca 705
>gb|BC058318.1| Danio rerio POU domain gene 12, mRNA (cDNA clone MGC:65765 IMAGE:6801552), complete cds Length = 2899 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 404 gaagtcgctctgcaccatct 423 |||||||||||||||||||| Sbjct: 743 gaagtcgctctgcaccatct 724
>gb|BC044354.1| Danio rerio POU domain gene 12, mRNA (cDNA clone MGC:55267 IMAGE:3818319), complete cds Length = 2285 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 404 gaagtcgctctgcaccatct 423 |||||||||||||||||||| Sbjct: 808 gaagtcgctctgcaccatct 789
>ref|NM_131150.1| Danio rerio POU domain gene 12 (pou12), mRNA Length = 2189 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 404 gaagtcgctctgcaccatct 423 |||||||||||||||||||| Sbjct: 728 gaagtcgctctgcaccatct 709
>emb|CR405683.10| Zebrafish DNA sequence from clone CH211-157B13 in linkage group 2, complete sequence Length = 166899 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 154 gctacactaaccaagatctt 173 |||||||||||||||||||| Sbjct: 7438 gctacactaaccaagatctt 7419
>ref|XM_541501.2| PREDICTED: Canis familiaris similar to Sarcoplasmic reticulum histidine-rich calcium-binding protein precursor (LOC484386), mRNA Length = 2344 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 433 tggacaccaaggccatcgagaaga 456 |||||||||||||||| ||||||| Sbjct: 1060 tggacaccaaggccatggagaaga 1083
>emb|AL353707.14| Human DNA sequence from clone RP11-553J6 on chromosome 9 Contains a ribosomal protein S19 (RPS19) pseudogene, complete sequence Length = 125373 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 120 accaagaatttcaccaaata 139 |||||||||||||||||||| Sbjct: 37039 accaagaatttcaccaaata 37058
>emb|AL158209.23| Human DNA sequence from clone RP11-275N1 on chromosome 10 Contains a novel gene and a pseudogene similar to part of FLJ10581, complete sequence Length = 132327 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 510 ctctcttttctgaactctca 529 |||||||||||||||||||| Sbjct: 29166 ctctcttttctgaactctca 29185
>emb|AL136231.12| Human DNA sequence from clone RP11-6J24 on chromosome 9p24.1-24.3 Contains the 3' end of the SLC1A1 gene for solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), the 5' end of a novel gene (FLJ10058), the gene for Hsp90-associating relative of Cdc37 (HARC) (FLJ20639), the 3' end of the AK3L1 gene for adenylate kinase 3 like 1 (AK3), a ribosomal protein S6 (RPS6) pseudogene and 3 CpG islands, complete sequence Length = 160012 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 150 tttagctacactaaccaaga 169 |||||||||||||||||||| Sbjct: 89494 tttagctacactaaccaaga 89513
>gb|AC161188.5| Mus musculus chromosome 8, clone RP23-227D17, complete sequence Length = 143672 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 226 accactttgtggagaagtcc 245 |||||||||||||||||||| Sbjct: 93276 accactttgtggagaagtcc 93295
>emb|Y07906.1|DRZP12POU D.rerio mRNA for zp-12 POU gene, splice variant (postsomitogenesis, 20-28 hpf) Length = 2994 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 404 gaagtcgctctgcaccatct 423 |||||||||||||||||||| Sbjct: 770 gaagtcgctctgcaccatct 751
>gb|BC065961.1| Danio rerio POU domain gene 12, mRNA (cDNA clone MGC:76858 IMAGE:6969114), complete cds Length = 2762 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 404 gaagtcgctctgcaccatct 423 |||||||||||||||||||| Sbjct: 768 gaagtcgctctgcaccatct 749
>gb|CP000133.1| Rhizobium etli CFN 42, complete genome Length = 4381608 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 489 ccttgatggcgaaatcaagc 508 |||||||||||||||||||| Sbjct: 676445 ccttgatggcgaaatcaagc 676426
>emb|BX842683.9| Zebrafish DNA sequence from clone DKEYP-118H3 in linkage group 9, complete sequence Length = 160823 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 404 gaagtcgctctgcaccatct 423 |||||||||||||||||||| Sbjct: 89529 gaagtcgctctgcaccatct 89510
>gb|AC117231.4| Mus musculus BAC clone RP23-394M5 from 8, complete sequence Length = 195936 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 150 tttagctacactaaccaaga 169 |||||||||||||||||||| Sbjct: 61868 tttagctacactaaccaaga 61849
>gb|U43898.2|DRU43898 Danio rerio alternatively spliced brn-1.1 protein variant (brn-1.1) mRNA, partial cds Length = 1326 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 404 gaagtcgctctgcaccatct 423 |||||||||||||||||||| Sbjct: 162 gaagtcgctctgcaccatct 143
>dbj|AP000484.5| Homo sapiens genomic DNA, chromosome 11q, clone:CMB9-14B22, complete sequences Length = 105149 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 150 tttagctacactaaccaaga 169 |||||||||||||||||||| Sbjct: 89307 tttagctacactaaccaaga 89288
>gb|AF039952.1|AF039952 Danio rerio type III POU domain protein (zp-12) mRNA, complete cds Length = 2189 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 404 gaagtcgctctgcaccatct 423 |||||||||||||||||||| Sbjct: 728 gaagtcgctctgcaccatct 709
>gb|U77736.1|DRU77736 Danio rerio class III POU domain protein (taichi) gene, complete cds Length = 1979 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 404 gaagtcgctctgcaccatct 423 |||||||||||||||||||| Sbjct: 270 gaagtcgctctgcaccatct 251
>gb|U79765.1|MCU79765 Mesembryanthemum crystallinum voltage-dependent anion-selective channel protein porin (VDAC) mRNA, complete cds Length = 1210 Score = 40.1 bits (20), Expect = 8.4 Identities = 35/40 (87%) Strand = Plus / Plus Query: 416 caccatctcggcggaggtggacaccaaggccatcgagaag 455 |||| |||| || ||||| |||||||||||||| |||||| Sbjct: 821 caccttctctgctgaggttgacaccaaggccattgagaag 860 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,220,435 Number of Sequences: 3902068 Number of extensions: 4220435 Number of successful extensions: 100837 Number of sequences better than 10.0: 70 Number of HSP's better than 10.0 without gapping: 71 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 100487 Number of HSP's gapped (non-prelim): 340 length of query: 620 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 597 effective length of database: 17,143,297,704 effective search space: 10234548729288 effective search space used: 10234548729288 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
