ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags17g17
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK101611.1| Oryza sativa (japonica cultivar-group) cDNA clon... 525 e-146
2gb|AY110754.1| Zea mays CL19491_1 mRNA sequence 262 1e-66
3emb|AL662952.6|OSJN00151 Oryza sativa genomic DNA, chromosome 4,... 155 2e-34
4dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 155 2e-34
5ref|NM_121681.2| Arabidopsis thaliana TOZ (TORMOZEMBRYO DEFECTIV... 54 5e-04
6gb|AY117219.1| Arabidopsis thaliana putative WD40-repeat protein... 54 5e-04
7gb|AY056281.1| Arabidopsis thaliana putative WD40-repeat protein... 54 5e-04
8gb|AY120781.1| Arabidopsis thaliana WD40-repeat protein (At5g167... 54 5e-04
9ref|NM_001017314.2| Xenopus tropicalis transducin (beta)-like 3 ... 46 0.12
10emb|CR855468.2| Xenopus tropicalis finished cDNA, clone TNeu070d08 46 0.12
11gb|AC123624.13| Mus musculus chromosome 16, clone RP23-133E12, c... 44 0.46
12emb|AL772337.17| Human DNA sequence from clone XXyac-21GA2 on ch... 44 0.46
13emb|AL034395.6|HS243L18 Human DNA sequence from clone RP1-243L18... 42 1.8
14emb|AL391147.1|ATF5E19 Arabidopsis thaliana DNA chromosome 5, BA... 42 1.8
15ref|NM_194722.1| Oryza sativa (japonica cultivar-group) putative... 40 7.2
16gb|AC121149.12| Mus musculus chromosome 3, clone RP24-383A4, com... 40 7.2
17ref|XM_723741.1| Plasmodium yoelii yoelii str. 17XNL hypothetica... 40 7.2
18ref|XM_674436.1| Plasmodium berghei strain ANKA Pb-fam-2 protein... 40 7.2
19gb|AC148304.3| Medicago truncatula clone mth2-21b19, complete se... 40 7.2
20gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome... 40 7.2
21gb|AC155807.3| Mus musculus BAC clone RP24-303N21 from chromosom... 40 7.2
22emb|AJ400871.1|SJA400871 Scomber japonicus mRNA for endoplasmic ... 40 7.2
23gb|AC087378.6| Homo sapiens chromosome 11, clone RP11-375L11, co... 40 7.2
24gb|AC106763.2| Homo sapiens chromosome 5 clone RP11-21C10, compl... 40 7.2
25gb|AC009379.7| Drosophila melanogaster 3L BAC RP98-48M6 (Roswell... 40 7.2
26gb|AC122147.1| Oryza sativa (japonica cultivar-group) chromosome... 40 7.2
27gb|AC009378.7| Drosophila melanogaster 3L BAC RP98-9E8 (Roswell ... 40 7.2
28gb|AC092553.4| Oryza sativa (japonica cultivar-group) chromosome... 40 7.2
29gb|AC104947.3| Homo sapiens chromosome 11, clone RP11-1029L14, c... 40 7.2
30gb|AC011433.5| Homo sapiens chromosome 5 clone P1_988H11, comple... 40 7.2
31gb|AC090423.11| Homo sapiens Xp BAC RP11-86G5 (Roswell Park Canc... 40 7.2
32gb|AC093827.3| Homo sapiens BAC clone RP11-397E7 from 4, complet... 40 7.2
33gb|AC164078.4| Mus musculus chromosome 3, clone RP23-123C15, com... 40 7.2
34gb|AC093608.3| Homo sapiens BAC clone RP11-700C8 from 4, complet... 40 7.2
35gb|AC147620.5| Mus musculus BAC clone RP24-285H21 from chromosom... 40 7.2
36gb|AC158611.7| Mus musculus 10 BAC RP23-29D19 (Roswell Park Canc... 40 7.2
37dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.2
38gb|AF151801.1|AF151801 Homo sapiens CGI-43 protein mRNA, complet... 40 7.2
39dbj|AK120449.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.2
40gb|AE003518.3| Drosophila melanogaster chromosome 3L, section 67... 40 7.2
41gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 40 7.2
42emb|AL929199.11| Mouse DNA sequence from clone RP23-458A10 on ch... 40 7.2
43dbj|AP006394.1| Lotus japonicus genomic DNA, chromosome 5, clone... 40 7.2
44emb|AJ403344.1|MMU403344 M.musculus DNA for desmin-binding fragm... 40 7.2
45emb|AJ403309.1|MMU403309 M.musculus DNA for desmin-binding fragm... 40 7.2
46emb|AJ403143.1|MMU403143 M.musculus DNA for vimentin-binding fra... 40 7.2
47emb|AL732459.5| Mouse DNA sequence from clone RP23-115J4 on chro... 40 7.2
48gb|M32554.1|MUSGSAT9D Mouse gamma-satellite DNA, clone 9D 40 7.2 
>dbj|AK101611.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033052D05, full
            insert sequence
          Length = 3158

 Score =  525 bits (265), Expect = e-146
 Identities = 460/525 (87%)
 Strand = Plus / Plus

                                                                        
Query: 5    tgttgctgatggctcatgcctgaagacatttgagggtcatacgtcaagtgttttgagagc 64
            |||||||||||| |||||| |||||||||||||||| ||||| || ||||||||  ||||
Sbjct: 1808 tgttgctgatggttcatgcttgaagacatttgagggccatacatctagtgttttacgagc 1867

                                                                        
Query: 65   ttcattcctttcacgtggaactcagtttgtttcttgtggaagcgatggtctagtgaagct 124
             |||||||||||||  || || || ||||||||||||||||||||||| || || |||||
Sbjct: 1868 ctcattcctttcacacgggacccaatttgtttcttgtggaagcgatggccttgttaagct 1927

                                                                        
Query: 125  atggacgataaaaacgaatgagtgcattgctacatatgacaagcacgatgggaaggtttg 184
            |||||| || ||||| ||||| ||||||||||| |  || ||||| ||||||||||||||
Sbjct: 1928 atggaccatcaaaacaaatgaatgcattgctactttcgataagcatgatgggaaggtttg 1987

                                                                        
Query: 185  ggcactggctgttggcaagaaaactgaaattcttgctactggtggaactgattctgatct 244
            |||||||||||||||||||||||||||||| ||||||||||| ||||||||| ||| |||
Sbjct: 1988 ggcactggctgttggcaagaaaactgaaatgcttgctactggcggaactgatgctgttct 2047

                                                                        
Query: 245  taacctttggtatgattgcacgttggaagataagcaggaggatttccttaagaaggagga 304
            |||||||||| |||| || ||  |||||||||| ||||| ||||| | ||| ||||||||
Sbjct: 2048 taacctttggcatgactgtaccatggaagataaacaggaagattttcgtaaaaaggagga 2107

                                                                        
Query: 305  ggaagttttaagaggccaggaattggaaaatgcagtgtcagattctgactatacaagagc 364
            |||| | || ||||| |||||||| ||||||||||| ||||||| ||||||| ||| |||
Sbjct: 2108 ggaactgttgagaggtcaggaattagaaaatgcagtatcagattatgactatgcaaaagc 2167

                                                                        
Query: 365  aatacaactcgcatttgagcttagaagaccacgcaggcttcttgagttattctcacaact 424
            ||||||||| |||||||||||||||||||| | ||||||||||||||||||| |||| ||
Sbjct: 2168 aatacaacttgcatttgagcttagaagaccccacaggcttcttgagttattcacacagct 2227

                                                                        
Query: 425  ttgcaggaaagctgatccagaggaccctatagaaaaagcccttgttggtctcccaaagga 484
            ||||||| |  ||||||  |||||||| ||||||||||||||| ||||||| ||||||||
Sbjct: 2228 ttgcagggagtctgatctggaggacccaatagaaaaagcccttattggtcttccaaagga 2287

                                                         
Query: 485  agggcttcgcgtgcttcttgagtatatacgtgaatggaatacaaa 529
            |||||||||||| |||||||||||||| || |||||||| |||||
Sbjct: 2288 agggcttcgcgtacttcttgagtatatccgggaatggaacacaaa 2332
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>gb|AY110754.1| Zea mays CL19491_1 mRNA sequence
          Length = 1005

 Score =  262 bits (132), Expect = 1e-66
 Identities = 243/280 (86%)
 Strand = Plus / Minus

                                                                       
Query: 256 atgattgcacgttggaagataagcaggaggatttccttaagaaggaggaggaagttttaa 315
           ||||||||||  |||||||||||||||| ||||||| |||||||||| | ||||||||||
Sbjct: 969 atgattgcaccatggaagataagcaggaagatttccgtaagaaggagcaagaagttttaa 910

                                                                       
Query: 316 gaggccaggaattggaaaatgcagtgtcagattctgactatacaagagcaatacaactcg 375
           |||||||||||||||||||||| |||||||||||||||||| |||  ||||||||||| |
Sbjct: 909 gaggccaggaattggaaaatgctgtgtcagattctgactatgcaaaggcaatacaacttg 850

                                                                       
Query: 376 catttgagcttagaagaccacgcaggcttcttgagttattctcacaactttgcaggaaag 435
           ||||||||||||||||||||| || |||||| || ||||||||||| |||  ||||  ||
Sbjct: 849 catttgagcttagaagaccacacaagcttctagatttattctcacagcttgccaggcgag 790

                                                                       
Query: 436 ctgatccagaggaccctatagaaaaagcccttgttggtctcccaaaggaagggcttcgcg 495
           ||||  ||||||| || |||||||| || ||| ||||||| |||||||| || ||||| |
Sbjct: 789 ctgacgcagaggatccaatagaaaaggctcttcttggtcttccaaaggatggccttcgtg 730

                                                   
Query: 496 tgcttcttgagtatatacgtgaatggaatacaaagcccaa 535
           ||||||| |||||    |||||||||||||| ||||||||
Sbjct: 729 tgcttctagagtacgcccgtgaatggaatacgaagcccaa 690
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>emb|AL662952.6|OSJN00151 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0009P12,
             complete sequence
          Length = 179644

 Score =  155 bits (78), Expect = 2e-34
 Identities = 120/134 (89%)
 Strand = Plus / Minus

                                                                         
Query: 298   aggaggaggaagttttaagaggccaggaattggaaaatgcagtgtcagattctgactata 357
             ||||||||||| | || ||||| |||||||| ||||||||||| ||||||| ||||||| 
Sbjct: 92771 aggaggaggaactgttgagaggtcaggaattagaaaatgcagtatcagattatgactatg 92712

                                                                         
Query: 358   caagagcaatacaactcgcatttgagcttagaagaccacgcaggcttcttgagttattct 417
             ||| |||||||||||| |||||||||||||||||||| | ||||||||||||||||||| 
Sbjct: 92711 caaaagcaatacaacttgcatttgagcttagaagaccccacaggcttcttgagttattca 92652

                           
Query: 418   cacaactttgcagg 431
             |||| |||||||||
Sbjct: 92651 cacagctttgcagg 92638



 Score =  135 bits (68), Expect = 2e-28
 Identities = 101/112 (90%)
 Strand = Plus / Minus

                                                                         
Query: 178   aggtttgggcactggctgttggcaagaaaactgaaattcttgctactggtggaactgatt 237
             ||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| 
Sbjct: 93190 aggtttgggcactggctgttggcaagaaaactgaaatgcttgctactggcggaactgatg 93131

                                                                 
Query: 238   ctgatcttaacctttggtatgattgcacgttggaagataagcaggaggattt 289
             ||| ||||||||||||| |||| || ||  |||||||||| ||||| |||||
Sbjct: 93130 ctgttcttaacctttggcatgactgtaccatggaagataaacaggaagattt 93079



 Score =  115 bits (58), Expect = 2e-22
 Identities = 79/86 (91%)
 Strand = Plus / Minus

                                                                         
Query: 444   gaggaccctatagaaaaagcccttgttggtctcccaaaggaagggcttcgcgtgcttctt 503
             |||||||| ||||||||||||||| ||||||| |||||||||||||||||||| ||||||
Sbjct: 92552 gaggacccaatagaaaaagcccttattggtcttccaaaggaagggcttcgcgtacttctt 92493

                                       
Query: 504   gagtatatacgtgaatggaatacaaa 529
             |||||||| || |||||||| |||||
Sbjct: 92492 gagtatatccgggaatggaacacaaa 92467



 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 86/99 (86%)
 Strand = Plus / Minus

                                                                         
Query: 5     tgttgctgatggctcatgcctgaagacatttgagggtcatacgtcaagtgttttgagagc 64
             |||||||||||| |||||| |||||||||||||||| ||||| || ||||||||  ||||
Sbjct: 93919 tgttgctgatggttcatgcttgaagacatttgagggccatacatctagtgttttacgagc 93860

                                                    
Query: 65    ttcattcctttcacgtggaactcagtttgtttcttgtgg 103
              |||||||||||||  || || || ||||||||||||||
Sbjct: 93859 ctcattcctttcacacgggacccaatttgtttcttgtgg 93821



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 68/80 (85%)
 Strand = Plus / Minus

                                                                         
Query: 102   ggaagcgatggtctagtgaagctatggacgataaaaacgaatgagtgcattgctacatat 161
             ||||||||||| || || ||||||||||| || ||||| ||||| ||||||||||| |  
Sbjct: 93737 ggaagcgatggccttgttaagctatggaccatcaaaacaaatgaatgcattgctactttc 93678

                                 
Query: 162   gacaagcacgatgggaaggt 181
             || ||||| |||||||||||
Sbjct: 93677 gataagcatgatgggaaggt 93658
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  155 bits (78), Expect = 2e-34
 Identities = 120/134 (89%)
 Strand = Plus / Minus

                                                                            
Query: 298      aggaggaggaagttttaagaggccaggaattggaaaatgcagtgtcagattctgactata 357
                ||||||||||| | || ||||| |||||||| ||||||||||| ||||||| ||||||| 
Sbjct: 29956019 aggaggaggaactgttgagaggtcaggaattagaaaatgcagtatcagattatgactatg 29955960

                                                                            
Query: 358      caagagcaatacaactcgcatttgagcttagaagaccacgcaggcttcttgagttattct 417
                ||| |||||||||||| |||||||||||||||||||| | ||||||||||||||||||| 
Sbjct: 29955959 caaaagcaatacaacttgcatttgagcttagaagaccccacaggcttcttgagttattca 29955900

                              
Query: 418      cacaactttgcagg 431
                |||| |||||||||
Sbjct: 29955899 cacagctttgcagg 29955886



 Score =  135 bits (68), Expect = 2e-28
 Identities = 101/112 (90%)
 Strand = Plus / Minus

                                                                            
Query: 178      aggtttgggcactggctgttggcaagaaaactgaaattcttgctactggtggaactgatt 237
                ||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| 
Sbjct: 29956438 aggtttgggcactggctgttggcaagaaaactgaaatgcttgctactggcggaactgatg 29956379

                                                                    
Query: 238      ctgatcttaacctttggtatgattgcacgttggaagataagcaggaggattt 289
                ||| ||||||||||||| |||| || ||  |||||||||| ||||| |||||
Sbjct: 29956378 ctgttcttaacctttggcatgactgtaccatggaagataaacaggaagattt 29956327



 Score =  115 bits (58), Expect = 2e-22
 Identities = 79/86 (91%)
 Strand = Plus / Minus

                                                                            
Query: 444      gaggaccctatagaaaaagcccttgttggtctcccaaaggaagggcttcgcgtgcttctt 503
                |||||||| ||||||||||||||| ||||||| |||||||||||||||||||| ||||||
Sbjct: 29955800 gaggacccaatagaaaaagcccttattggtcttccaaaggaagggcttcgcgtacttctt 29955741

                                          
Query: 504      gagtatatacgtgaatggaatacaaa 529
                |||||||| || |||||||| |||||
Sbjct: 29955740 gagtatatccgggaatggaacacaaa 29955715



 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 86/99 (86%)
 Strand = Plus / Minus

                                                                            
Query: 5        tgttgctgatggctcatgcctgaagacatttgagggtcatacgtcaagtgttttgagagc 64
                |||||||||||| |||||| |||||||||||||||| ||||| || ||||||||  ||||
Sbjct: 29957167 tgttgctgatggttcatgcttgaagacatttgagggccatacatctagtgttttacgagc 29957108

                                                       
Query: 65       ttcattcctttcacgtggaactcagtttgtttcttgtgg 103
                 |||||||||||||  || || || ||||||||||||||
Sbjct: 29957107 ctcattcctttcacacgggacccaatttgtttcttgtgg 29957069



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 68/80 (85%)
 Strand = Plus / Minus

                                                                            
Query: 102      ggaagcgatggtctagtgaagctatggacgataaaaacgaatgagtgcattgctacatat 161
                ||||||||||| || || ||||||||||| || ||||| ||||| ||||||||||| |  
Sbjct: 29956985 ggaagcgatggccttgttaagctatggaccatcaaaacaaatgaatgcattgctactttc 29956926

                                    
Query: 162      gacaagcacgatgggaaggt 181
                || ||||| |||||||||||
Sbjct: 29956925 gataagcatgatgggaaggt 29956906
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>ref|NM_121681.2| Arabidopsis thaliana TOZ (TORMOZEMBRYO DEFECTIVE); nucleotide binding
            AT5G16750 (TOZ) mRNA, complete cds
          Length = 2902

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 72/87 (82%)
 Strand = Plus / Plus

                                                                        
Query: 144  gagtgcattgctacatatgacaagcacgatgggaaggtttgggcactggctgttggcaag 203
            ||||||||||| ||||||||| ||||||| |  ||||| |||||  | |||||||| |||
Sbjct: 1922 gagtgcattgccacatatgaccagcacgaggacaaggtatgggctttagctgttggaaag 1981

                                       
Query: 204  aaaactgaaattcttgctactggtgga 230
            || || |||||  |||| |||||||||
Sbjct: 1982 aagacagaaatgattgcaactggtgga 2008
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>gb|AY117219.1| Arabidopsis thaliana putative WD40-repeat protein (At5g16750) mRNA,
            complete cds
          Length = 2101

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 72/87 (82%)
 Strand = Plus / Plus

                                                                        
Query: 144  gagtgcattgctacatatgacaagcacgatgggaaggtttgggcactggctgttggcaag 203
            ||||||||||| ||||||||| ||||||| |  ||||| |||||  | |||||||| |||
Sbjct: 1285 gagtgcattgccacatatgaccagcacgaggacaaggtatgggctttagctgttggaaag 1344

                                       
Query: 204  aaaactgaaattcttgctactggtgga 230
            || || |||||  |||| |||||||||
Sbjct: 1345 aagacagaaatgattgcaactggtgga 1371
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>gb|AY056281.1| Arabidopsis thaliana putative WD40-repeat protein (At5g16750) mRNA,
            complete cds
          Length = 2334

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 72/87 (82%)
 Strand = Plus / Plus

                                                                        
Query: 144  gagtgcattgctacatatgacaagcacgatgggaaggtttgggcactggctgttggcaag 203
            ||||||||||| ||||||||| ||||||| |  ||||| |||||  | |||||||| |||
Sbjct: 1338 gagtgcattgccacatatgaccagcacgaggacaaggtatgggctttagctgttggaaag 1397

                                       
Query: 204  aaaactgaaattcttgctactggtgga 230
            || || |||||  |||| |||||||||
Sbjct: 1398 aagacagaaatgattgcaactggtgga 1424
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>gb|AY120781.1| Arabidopsis thaliana WD40-repeat protein (At5g16750) mRNA, partial
            cds
          Length = 2545

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 72/87 (82%)
 Strand = Plus / Plus

                                                                        
Query: 144  gagtgcattgctacatatgacaagcacgatgggaaggtttgggcactggctgttggcaag 203
            ||||||||||| ||||||||| ||||||| |  ||||| |||||  | |||||||| |||
Sbjct: 1922 gagtgcattgccacatatgaccagcacgaggacaaggtatgggctttagctgttggaaag 1981

                                       
Query: 204  aaaactgaaattcttgctactggtgga 230
            || || |||||  |||| |||||||||
Sbjct: 1982 aagacagaaatgattgcaactggtgga 2008
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>ref|NM_001017314.2| Xenopus tropicalis transducin (beta)-like 3 (tbl3), mRNA
          Length = 2987

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 21   tgcctgaagacatttgagggtca 43
            |||||||||||||||||||||||
Sbjct: 1729 tgcctgaagacatttgagggtca 1751
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>emb|CR855468.2| Xenopus tropicalis finished cDNA, clone TNeu070d08
          Length = 2987

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 21   tgcctgaagacatttgagggtca 43
            |||||||||||||||||||||||
Sbjct: 1729 tgcctgaagacatttgagggtca 1751
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>gb|AC123624.13| Mus musculus chromosome 16, clone RP23-133E12, complete sequence
          Length = 214202

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 340    tgtcagattctgactatacaagagca 365
              |||||||||||| |||||||||||||
Sbjct: 112293 tgtcagattctgtctatacaagagca 112318
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>emb|AL772337.17| Human DNA sequence from clone XXyac-21GA2 on chromosome 9 Contains a
             pseudogene similar to part of E74-like factor 2 (ets
             domain transcription factor) (EU32, NERF, NERF-2,
             NERF-1A,NERF-1B) (ELF2), a cathepsin L (MEP, CATL) (CTSL)
             pseudogene, a pseudogene similar to part of a
             fructose-1,6-bisphosphatase protein, two novel genes, a
             novel gene (FLJ35866) and a CpG island, complete sequence
          Length = 95932

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 1     ggcatgttgctgatggctcatgcctg 26
             |||||||||||| |||||||||||||
Sbjct: 34600 ggcatgttgctggtggctcatgcctg 34575
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>emb|AL034395.6|HS243L18 Human DNA sequence from clone RP1-243L18 on chromosome 1p36.11-36.23
             Contains the 5' end of a novel gene (KIAA1026) and a CpG
             island, complete sequence
          Length = 110654

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 415   tctcacaactttgcaggaaag 435
             |||||||||||||||||||||
Sbjct: 16602 tctcacaactttgcaggaaag 16622
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>emb|AL391147.1|ATF5E19 Arabidopsis thaliana DNA chromosome 5, BAC clone F5E19 (ESSA project)
          Length = 77976

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 144   gagtgcattgctacatatgacaagcacga 172
             ||||||||||| ||||||||| |||||||
Sbjct: 39884 gagtgcattgccacatatgaccagcacga 39856
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>ref|NM_194722.1| Oryza sativa (japonica cultivar-group) putative NBS-LRR type
            resistance protein (OSJNBb0072F04.19), mRNA
          Length = 2883

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 465  cttgttggtctcccaaagga 484
            ||||||||||||||||||||
Sbjct: 1747 cttgttggtctcccaaagga 1766
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>gb|AC121149.12| Mus musculus chromosome 3, clone RP24-383A4, complete sequence
          Length = 172369

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 296  gaaggaggaggaagttttaa 315
            ||||||||||||||||||||
Sbjct: 6070 gaaggaggaggaagttttaa 6089
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>ref|XM_723741.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY07854)
           partial mRNA
          Length = 150

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 197 tggcaagaaaactgaaattc 216
           ||||||||||||||||||||
Sbjct: 62  tggcaagaaaactgaaattc 81
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>ref|XM_674436.1| Plasmodium berghei strain ANKA Pb-fam-2 protein (PB402916.00.0)
            partial mRNA
          Length = 7009

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 197  tggcaagaaaactgaaattc 216
            ||||||||||||||||||||
Sbjct: 4002 tggcaagaaaactgaaattc 3983
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>gb|AC148304.3| Medicago truncatula clone mth2-21b19, complete sequence
          Length = 110520

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 269   ggaagataagcaggaggatt 288
             ||||||||||||||||||||
Sbjct: 62328 ggaagataagcaggaggatt 62309
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>gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone
               Pseudo10p0.0-10p4.4, complete sequence
          Length = 2331000

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 465     cttgttggtctcccaaagga 484
               ||||||||||||||||||||
Sbjct: 1870866 cttgttggtctcccaaagga 1870847
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>gb|AC155807.3| Mus musculus BAC clone RP24-303N21 from chromosome 8, complete sequence
          Length = 167996

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 295   agaaggaggaggaagtttta 314
             ||||||||||||||||||||
Sbjct: 93130 agaaggaggaggaagtttta 93149
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>emb|AJ400871.1|SJA400871 Scomber japonicus mRNA for endoplasmic reticulum lumenal L-amino
           acid oxidase (lao gene)
          Length = 2025

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 202 agaaaactgaaattcttgct 221
           ||||||||||||||||||||
Sbjct: 1   agaaaactgaaattcttgct 20
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>gb|AC087378.6| Homo sapiens chromosome 11, clone RP11-375L11, complete sequence
          Length = 166379

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 463   cccttgttggtctcccaaag 482
             ||||||||||||||||||||
Sbjct: 89499 cccttgttggtctcccaaag 89518
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>gb|AC106763.2| Homo sapiens chromosome 5 clone RP11-21C10, complete sequence
          Length = 165902

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 290    ccttaagaaggaggaggaag 309
              ||||||||||||||||||||
Sbjct: 121330 ccttaagaaggaggaggaag 121311
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>gb|AC009379.7| Drosophila melanogaster 3L BAC RP98-48M6 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 175963

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 296   gaaggaggaggaagttttaagaggccag 323
             |||||||||||||||| | |||||||||
Sbjct: 14026 gaaggaggaggaagttgtgagaggccag 13999
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>gb|AC122147.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone
             OSJNAb0072F04, complete sequence
          Length = 137724

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 465   cttgttggtctcccaaagga 484
             ||||||||||||||||||||
Sbjct: 89319 cttgttggtctcccaaagga 89300
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>gb|AC009378.7| Drosophila melanogaster 3L BAC RP98-9E8 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 180387

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 296   gaaggaggaggaagttttaagaggccag 323
             |||||||||||||||| | |||||||||
Sbjct: 96263 gaaggaggaggaagttgtgagaggccag 96290
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>gb|AC092553.4| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBb0072F04,
              complete sequence
          Length = 133121

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 465    cttgttggtctcccaaagga 484
              ||||||||||||||||||||
Sbjct: 122440 cttgttggtctcccaaagga 122421
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>gb|AC104947.3| Homo sapiens chromosome 11, clone RP11-1029L14, complete sequence
          Length = 186823

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 463   cccttgttggtctcccaaag 482
             ||||||||||||||||||||
Sbjct: 32428 cccttgttggtctcccaaag 32409
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>gb|AC011433.5| Homo sapiens chromosome 5 clone P1_988H11, complete sequence
          Length = 75454

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 290   ccttaagaaggaggaggaag 309
             ||||||||||||||||||||
Sbjct: 26525 ccttaagaaggaggaggaag 26544
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>gb|AC090423.11| Homo sapiens Xp BAC RP11-86G5 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 104901

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 204    aaaactgaaattcttgctac 223
              ||||||||||||||||||||
Sbjct: 100054 aaaactgaaattcttgctac 100035
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>gb|AC093827.3| Homo sapiens BAC clone RP11-397E7 from 4, complete sequence
          Length = 192263

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 79    gtggaactcagtttgtttct 98
             ||||||||||||||||||||
Sbjct: 29133 gtggaactcagtttgtttct 29114
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>gb|AC164078.4| Mus musculus chromosome 3, clone RP23-123C15, complete sequence
          Length = 188095

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 296    gaaggaggaggaagttttaa 315
              ||||||||||||||||||||
Sbjct: 161541 gaaggaggaggaagttttaa 161522
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>gb|AC093608.3| Homo sapiens BAC clone RP11-700C8 from 4, complete sequence
          Length = 162015

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 342  tcagattctgactatacaag 361
            ||||||||||||||||||||
Sbjct: 7870 tcagattctgactatacaag 7851
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>gb|AC147620.5| Mus musculus BAC clone RP24-285H21 from chromosome 13, complete
             sequence
          Length = 172051

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 270   gaagataagcaggaggattt 289
             ||||||||||||||||||||
Sbjct: 80438 gaagataagcaggaggattt 80457
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>gb|AC158611.7| Mus musculus 10 BAC RP23-29D19 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 214923

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 441    ccagaggaccctatagaaaa 460
              ||||||||||||||||||||
Sbjct: 116895 ccagaggaccctatagaaaa 116876
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
               sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 465     cttgttggtctcccaaagga 484
               ||||||||||||||||||||
Sbjct: 1870866 cttgttggtctcccaaagga 1870847
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>gb|AF151801.1|AF151801 Homo sapiens CGI-43 protein mRNA, complete cds
          Length = 2457

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 79 gtggaactcagtttgtttct 98
          ||||||||||||||||||||
Sbjct: 61 gtggaactcagtttgtttct 42
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>dbj|AK120449.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013101D04, full
            insert sequence
          Length = 3762

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 465  cttgttggtctcccaaagga 484
            ||||||||||||||||||||
Sbjct: 1957 cttgttggtctcccaaagga 1976
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>gb|AE003518.3| Drosophila melanogaster chromosome 3L, section 67 of 83 of the complete
              sequence
          Length = 279088

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 296    gaaggaggaggaagttttaagaggccag 323
              |||||||||||||||| | |||||||||
Sbjct: 275743 gaaggaggaggaagttgtgagaggccag 275770
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 465     cttgttggtctcccaaagga 484
               ||||||||||||||||||||
Sbjct: 1870817 cttgttggtctcccaaagga 1870798
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>emb|AL929199.11| Mouse DNA sequence from clone RP23-458A10 on chromosome 2, complete
             sequence
          Length = 95855

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 294   aagaaggaggaggaagtttt 313
             ||||||||||||||||||||
Sbjct: 52488 aagaaggaggaggaagtttt 52469
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>dbj|AP006394.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT01K09, TM0278,
             complete sequence
          Length = 82082

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 25    tgaagacatttgagggtcat 44
             ||||||||||||||||||||
Sbjct: 64706 tgaagacatttgagggtcat 64687
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>emb|AJ403344.1|MMU403344 M.musculus DNA for desmin-binding fragment DesB47
          Length = 331

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 197 tggcaagaaaactgaaattc 216
           ||||||||||||||||||||
Sbjct: 115 tggcaagaaaactgaaattc 134
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>emb|AJ403309.1|MMU403309 M.musculus DNA for desmin-binding fragment DesB12
          Length = 407

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 197 tggcaagaaaactgaaattc 216
           ||||||||||||||||||||
Sbjct: 69  tggcaagaaaactgaaattc 88
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>emb|AJ403143.1|MMU403143 M.musculus DNA for vimentin-binding fragment VimC8
          Length = 304

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 197 tggcaagaaaactgaaattc 216
           ||||||||||||||||||||
Sbjct: 188 tggcaagaaaactgaaattc 207
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>emb|AL732459.5| Mouse DNA sequence from clone RP23-115J4 on chromosome X, complete
              sequence
          Length = 201897

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 201    aagaaaactgaaattcttgc 220
              ||||||||||||||||||||
Sbjct: 148079 aagaaaactgaaattcttgc 148098
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>gb|M32554.1|MUSGSAT9D Mouse gamma-satellite DNA, clone 9D
          Length = 231

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 197 tggcaagaaaactgaaattc 216
           ||||||||||||||||||||
Sbjct: 63  tggcaagaaaactgaaattc 82


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,755,699
Number of Sequences: 3902068
Number of extensions: 5755699
Number of successful extensions: 143126
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 142877
Number of HSP's gapped (non-prelim): 248
length of query: 535
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 512
effective length of database: 17,143,297,704
effective search space: 8777368424448
effective search space used: 8777368424448
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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