ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags16p23
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|BX569792.15| Zebrafish DNA sequence from clone CH211-197I17 ... 46 0.12
2emb|BX088600.12| Zebrafish DNA sequence from clone DKEY-166M7 in... 46 0.12
3gb|AC007385.3| Homo sapiens BAC clone RP11-325M10 from 2, comple... 46 0.12
4emb|BX927281.25| Zebrafish DNA sequence from clone CH211-255P12 ... 44 0.48
5emb|CT573071.1| Kuenenia stuttgartiensis genome fragment KUST_E ... 44 0.48
6emb|AL935133.11| Mouse DNA sequence from clone RP23-70C14 on chr... 44 0.48
7gb|CP000225.1| Drosophila melanogaster genomic scaffold 21100002... 44 0.48
8emb|AL929110.10| Mouse DNA sequence from clone RP23-275P20 on ch... 44 0.48
9gb|BC106640.1| Xenopus laevis cDNA clone MGC:132184 IMAGE:695607... 42 1.9
10gb|AC091677.12| Mus musculus chromosome 18, clone RP23-131E5, co... 42 1.9
11gb|AC125157.4| Mus musculus BAC clone RP24-390G17 from chromosom... 42 1.9
12gb|AC008620.12| Homo sapiens chromosome 5 clone CTB-14A14, compl... 42 1.9
13emb|X86403.1|CEACR2 C.elegans mRNA for nicotinic acetylcholine r... 42 1.9
14emb|BX649638.19| Zebrafish DNA sequence from clone CH211-64M24 i... 42 1.9
15ref|NM_076727.3| Caenorhabditis elegans AcetylCholine Receptor f... 42 1.9
16gb|AC017014.4| Homo sapiens BAC clone RP11-142D10 from 2, comple... 42 1.9
17gb|U23525.2| Caenorhabditis elegans cosmid K11G12, complete sequ... 42 1.9
18emb|AL928926.9| Mouse DNA sequence from clone RP23-443G7 on chro... 42 1.9
19gb|AC103624.9| Mus musculus chromosome 5, clone RP24-258B22, com... 40 7.5
20gb|AC154240.2| Mus musculus BAC clone RP24-170E23 from chromosom... 40 7.5
21gb|AC161480.9| Mus musculus chromosome 15, clone RP23-404I10, co... 40 7.5
22gb|AC154384.2| Mus musculus BAC clone RP23-39K21 from chromosome... 40 7.5
23gb|AC139940.5| Mus musculus chromosome 15, clone RP23-468K16, co... 40 7.5
24gb|AC140395.2| Mus musculus BAC clone RP24-183G4 from chromosome... 40 7.5
25gb|AC122379.4| Mus musculus BAC clone RP23-476A7 from chromosome... 40 7.5
26gb|AC123946.4| Mus musculus BAC clone RP23-97L17 from chromosome... 40 7.5
27gb|AC132050.4| Rattus norvegicus 20 BAC CH230-118G13 (Children's... 40 7.5
28gb|AC164177.6| Mus musculus 10 BAC RP23-102O12 (Roswell Park Can... 40 7.5
29emb|CR352283.6| Zebrafish DNA sequence from clone CH211-105M14 i... 40 7.5
30emb|AL832414.1|HSM803722 Homo sapiens mRNA; cDNA DKFZp667N1113 (... 40 7.5
31emb|CR786576.5| Zebrafish DNA sequence from clone DKEY-223D7 in ... 40 7.5
32emb|BX548158.10| Zebrafish DNA sequence from clone CH211-106G4 i... 40 7.5
33gb|AC151838.6| Mus musculus BAC clone RP23-226C6 from chromosome... 40 7.5
34gb|AC091871.2| Homo sapiens chromosome 5 clone CTD-2502G1, compl... 40 7.5
35gb|AC089996.12| Homo sapiens 12 BAC RP11-76M15 (Roswell Park Can... 40 7.5
36gb|AC100773.2| Homo sapiens chromosome 11, clone RP11-960D24, co... 40 7.5
37gb|AC108217.3| Homo sapiens BAC clone RP11-681L8 from 4, complet... 40 7.5
38gb|AC096921.2| Homo sapiens chromosome 3 clone RP11-1024P17, com... 40 7.5
39gb|AY267199.1| Spinacia oleracea CPD photolyase gene, complete cds 40 7.5
40gb|AY267198.1| Spinacia oleracea CPD photolyase mRNA, complete cds 40 7.5
41gb|AC090111.1|AC090111 Homo sapiens chromosome 21 clone unknown,... 40 7.5
42gb|AC026776.4|AC026776 Homo sapiens chromosome 21 clone CTC-304G... 40 7.5
43dbj|AP000031.1| Homo sapiens genomic DNA, chromosome 21q22.1, se... 40 7.5
44gb|AC093025.5| Homo sapiens 12 BAC RP11-384P14 (Roswell Park Can... 40 7.5
45gb|AF011889.1|AF011889 Human Xq28 cosmids U126G1, U142F2, U69B6,... 40 7.5
46gb|AC138391.2| Homo sapiens chromosome 3 clone RP11-167C9, compl... 40 7.5
47gb|AC079068.11| Homo sapiens chromosome 15, clone RP11-90A19, co... 40 7.5
48dbj|AP007256.1| Danio rerio DNA, clone:DKEY-188F22, complete seq... 40 7.5
49emb|BX005073.7| Zebrafish DNA sequence from clone CH211-129N18, ... 40 7.5
50dbj|BS000114.1| Pan troglodytes chromosome 22 clone:RP43-168A22,... 40 7.5
51dbj|BS000113.1| Pan troglodytes chromosome 22 clone:RP43-098E13,... 40 7.5
52gb|AC154123.9| Mus musculus chromosome 5, clone RP24-324D14, com... 40 7.5
53emb|CT574592.2| Pan troglodytes chromosome X clone PTB-082B15 ma... 40 7.5
54dbj|AP001711.1| Homo sapiens genomic DNA, chromosome 21q, sectio... 40 7.5
55gb|AC156027.2| Mus musculus BAC clone RP23-55O17 from chromosome... 40 7.5
56gb|AC130661.14| Mus musculus chromosome 12, clone RP23-337K17, c... 40 7.5
57emb|AL121992.24|HSDJ680D5 Human DNA sequence from clone RP4-680D... 40 7.5
58emb|AL683811.6| Mouse DNA sequence from clone RP23-291K22 on chr... 40 7.5
59emb|AL117258.4|CNS01DRI Human chromosome 14 DNA sequence BAC R-2... 40 7.5
60dbj|AP000255.2| Homo sapiens genomic DNA, chromosome 21q22.1,21S... 40 7.5
61dbj|AP000213.1| Homo sapiens genomic DNA, chromosome 21q22.1, D2... 40 7.5
62emb|AL672005.7| Mouse DNA sequence from clone RP23-401A9 on chro... 40 7.5 
>emb|BX569792.15| Zebrafish DNA sequence from clone CH211-197I17 in linkage group 16,
             complete sequence
          Length = 234579

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                        
Query: 123   tgctttaaatataaagtctgtttttca 149
             ||||||||||||||||| |||||||||
Sbjct: 59706 tgctttaaatataaagtatgtttttca 59732
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>emb|BX088600.12| Zebrafish DNA sequence from clone DKEY-166M7 in linkage group 16,
             complete sequence
          Length = 192992

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                        
Query: 123   tgctttaaatataaagtctgtttttca 149
             ||||||||||||||||| |||||||||
Sbjct: 81813 tgctttaaatataaagtatgtttttca 81839
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>gb|AC007385.3| Homo sapiens BAC clone RP11-325M10 from 2, complete sequence
          Length = 188062

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 81     gcttgttggaggtgtgataaagc 103
              |||||||||||||||||||||||
Sbjct: 149105 gcttgttggaggtgtgataaagc 149083
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>emb|BX927281.25| Zebrafish DNA sequence from clone CH211-255P12 in linkage group 18,
             complete sequence
          Length = 151835

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 58    actgtttatattttctaccaat 79
             ||||||||||||||||||||||
Sbjct: 28195 actgtttatattttctaccaat 28216
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>emb|CT573071.1| Kuenenia stuttgartiensis genome fragment KUST_E (5 of 5)
          Length = 2199546

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                         
Query: 169     aaggaattttattgggtatttcttca 194
               ||||||||||| ||||||||||||||
Sbjct: 1226018 aaggaattttagtgggtatttcttca 1225993
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>emb|AL935133.11| Mouse DNA sequence from clone RP23-70C14 on chromosome 2, complete
            sequence
          Length = 105813

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 341  catggttttattttactggttt 362
            ||||||||||||||||||||||
Sbjct: 1870 catggttttattttactggttt 1891
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>gb|CP000225.1| Drosophila melanogaster genomic scaffold 211000022280724
          Length = 820587

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 213   ctgtttattttaaaagtcatat 234
             ||||||||||||||||||||||
Sbjct: 92330 ctgtttattttaaaagtcatat 92351
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>emb|AL929110.10| Mouse DNA sequence from clone RP23-275P20 on chromosome 2, complete
              sequence
          Length = 186386

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 341    catggttttattttactggttt 362
              ||||||||||||||||||||||
Sbjct: 186256 catggttttattttactggttt 186277
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>gb|BC106640.1| Xenopus laevis cDNA clone MGC:132184 IMAGE:6956070, complete cds
          Length = 1741

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 445  gctacttatttgtttaatctg 465
            |||||||||||||||||||||
Sbjct: 1145 gctacttatttgtttaatctg 1125
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>gb|AC091677.12| Mus musculus chromosome 18, clone RP23-131E5, complete sequence
          Length = 222121

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 373    atgggagagggagacaaccagagcc 397
              ||||||||||||||||| |||||||
Sbjct: 197934 atgggagagggagacaatcagagcc 197958
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>gb|AC125157.4| Mus musculus BAC clone RP24-390G17 from chromosome 18, complete
             sequence
          Length = 207265

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 373   atgggagagggagacaaccagagcc 397
             ||||||||||||||||| |||||||
Sbjct: 10477 atgggagagggagacaatcagagcc 10501
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>gb|AC008620.12| Homo sapiens chromosome 5 clone CTB-14A14, complete sequence
          Length = 124713

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 343   tggttttattttactggtttc 363
             |||||||||||||||||||||
Sbjct: 84836 tggttttattttactggtttc 84816
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>emb|X86403.1|CEACR2 C.elegans mRNA for nicotinic acetylcholine receptor, non-alpha
            subunit
          Length = 1923

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 24   tgcagtgaatcaacatgattt 44
            |||||||||||||||||||||
Sbjct: 1473 tgcagtgaatcaacatgattt 1453
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>emb|BX649638.19| Zebrafish DNA sequence from clone CH211-64M24 in linkage group 18,
             complete sequence
          Length = 185541

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 450   ttatttgtttaatctgtctgatgga 474
             |||||||||| ||||||||||||||
Sbjct: 74217 ttatttgtttgatctgtctgatgga 74193
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>ref|NM_076727.3| Caenorhabditis elegans AcetylCholine Receptor family member (acr-2)
            (acr-2) mRNA, complete cds
          Length = 1728

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 24   tgcagtgaatcaacatgattt 44
            |||||||||||||||||||||
Sbjct: 1451 tgcagtgaatcaacatgattt 1431
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>gb|AC017014.4| Homo sapiens BAC clone RP11-142D10 from 2, complete sequence
          Length = 182366

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 31     aatcaacatgatttaatgatt 51
              |||||||||||||||||||||
Sbjct: 137152 aatcaacatgatttaatgatt 137132
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>gb|U23525.2| Caenorhabditis elegans cosmid K11G12, complete sequence
          Length = 27505

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 24   tgcagtgaatcaacatgattt 44
            |||||||||||||||||||||
Sbjct: 6104 tgcagtgaatcaacatgattt 6084
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>emb|AL928926.9| Mouse DNA sequence from clone RP23-443G7 on chromosome 2, complete
             sequence
          Length = 211456

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 84    tgttggaggtgtgataaagcc 104
             |||||||||||||||||||||
Sbjct: 27414 tgttggaggtgtgataaagcc 27394
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>gb|AC103624.9| Mus musculus chromosome 5, clone RP24-258B22, complete sequence
          Length = 172330

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 213   ctgtttattttaaaagtcatattgtaca 240
             |||||||| |||||||||||||| ||||
Sbjct: 57297 ctgtttatattaaaagtcatattataca 57270
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>gb|AC154240.2| Mus musculus BAC clone RP24-170E23 from chromosome 12, complete sequence
          Length = 160191

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 494    ttctgattcatataaatgacaaag 517
              |||||||||| |||||||||||||
Sbjct: 118080 ttctgattcaaataaatgacaaag 118057
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>gb|AC161480.9| Mus musculus chromosome 15, clone RP23-404I10, complete sequence
          Length = 187202

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 113    tgattattagtgctttaaat 132
              ||||||||||||||||||||
Sbjct: 177791 tgattattagtgctttaaat 177772
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>gb|AC154384.2| Mus musculus BAC clone RP23-39K21 from chromosome 14, complete sequence
          Length = 242114

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 486    ctcaacatttctgattcatataaa 509
              |||||||||||||| |||||||||
Sbjct: 173707 ctcaacatttctgagtcatataaa 173730
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>gb|AC139940.5| Mus musculus chromosome 15, clone RP23-468K16, complete sequence
          Length = 212183

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 113   tgattattagtgctttaaat 132
             ||||||||||||||||||||
Sbjct: 53495 tgattattagtgctttaaat 53476
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>gb|AC140395.2| Mus musculus BAC clone RP24-183G4 from chromosome 6, complete sequence
          Length = 183546

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 170   aggaattttattgggtattt 189
             ||||||||||||||||||||
Sbjct: 39199 aggaattttattgggtattt 39218
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>gb|AC122379.4| Mus musculus BAC clone RP23-476A7 from chromosome 13, complete sequence
          Length = 171737

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 216   tttattttaaaagtcatatt 235
             ||||||||||||||||||||
Sbjct: 81719 tttattttaaaagtcatatt 81700
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>gb|AC123946.4| Mus musculus BAC clone RP23-97L17 from chromosome 12, complete sequence
          Length = 193610

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 165    tataaaggaattttattggg 184
              ||||||||||||||||||||
Sbjct: 100566 tataaaggaattttattggg 100547
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>gb|AC132050.4| Rattus norvegicus 20 BAC CH230-118G13 (Children's Hospital Oakland
              Research Institute) complete sequence
          Length = 247624

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 175    ttttattgggtatttcttca 194
              ||||||||||||||||||||
Sbjct: 224517 ttttattgggtatttcttca 224536
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>gb|AC164177.6| Mus musculus 10 BAC RP23-102O12 (Roswell Park Cancer Institute
             (C57BL/6J Female) Mouse BAC Library) complete sequence
          Length = 196230

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 307   ttgttcttgtggagtctgta 326
             ||||||||||||||||||||
Sbjct: 91962 ttgttcttgtggagtctgta 91943
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>emb|CR352283.6| Zebrafish DNA sequence from clone CH211-105M14 in linkage group 12,
              complete sequence
          Length = 161750

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 345    gttttattttactggtttcgcatg 368
              |||||||||||||||||| |||||
Sbjct: 121281 gttttattttactggtttagcatg 121258
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>emb|AL832414.1|HSM803722 Homo sapiens mRNA; cDNA DKFZp667N1113 (from clone DKFZp667N1113)
          Length = 2822

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 216 tttattttaaaagtcatatt 235
           ||||||||||||||||||||
Sbjct: 537 tttattttaaaagtcatatt 556
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>emb|CR786576.5| Zebrafish DNA sequence from clone DKEY-223D7 in linkage group 2,
             complete sequence
          Length = 202469

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 439   atcaatgctacttatttgtt 458
             ||||||||||||||||||||
Sbjct: 96387 atcaatgctacttatttgtt 96368
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>emb|BX548158.10| Zebrafish DNA sequence from clone CH211-106G4 in linkage group 8,
             complete sequence
          Length = 190936

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 344   ggttttattttactggtttc 363
             ||||||||||||||||||||
Sbjct: 47045 ggttttattttactggtttc 47064
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>gb|AC151838.6| Mus musculus BAC clone RP23-226C6 from chromosome 7, complete sequence
          Length = 222398

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 159    tgatcttataaaggaatttt 178
              ||||||||||||||||||||
Sbjct: 147068 tgatcttataaaggaatttt 147049
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>gb|AC091871.2| Homo sapiens chromosome 5 clone CTD-2502G1, complete sequence
          Length = 87034

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 97    ataaagccatggaaattgattatt 120
             ||||||||||||| ||||||||||
Sbjct: 74638 ataaagccatggatattgattatt 74661
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>gb|AC089996.12| Homo sapiens 12 BAC RP11-76M15 (Roswell Park Cancer Institute Human
            BAC Library) complete sequence
          Length = 107793

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 132  tataaagtctgtttttcattgaag 155
            |||||||| |||||||||||||||
Sbjct: 1247 tataaagtttgtttttcattgaag 1224
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>gb|AC100773.2| Homo sapiens chromosome 11, clone RP11-960D24, complete sequence
          Length = 199549

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 501    tcatataaatgacaaagtca 520
              ||||||||||||||||||||
Sbjct: 129380 tcatataaatgacaaagtca 129399
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>gb|AC108217.3| Homo sapiens BAC clone RP11-681L8 from 4, complete sequence
          Length = 111201

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 132   tataaagtctgtttttcatt 151
             ||||||||||||||||||||
Sbjct: 72752 tataaagtctgtttttcatt 72733
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>gb|AC096921.2| Homo sapiens chromosome 3 clone RP11-1024P17, complete sequence
          Length = 201412

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 57     aactgtttatattttctacc 76
              ||||||||||||||||||||
Sbjct: 192148 aactgtttatattttctacc 192167
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>gb|AY267199.1| Spinacia oleracea CPD photolyase gene, complete cds
          Length = 4232

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 332  gggaagatgcatggttttat 351
            ||||||||||||||||||||
Sbjct: 2876 gggaagatgcatggttttat 2895
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>gb|AY267198.1| Spinacia oleracea CPD photolyase mRNA, complete cds
          Length = 1476

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 332  gggaagatgcatggttttat 351
            ||||||||||||||||||||
Sbjct: 1123 gggaagatgcatggttttat 1142
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>gb|AC090111.1|AC090111 Homo sapiens chromosome 21 clone unknown, complete sequence
          Length = 136653

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 118   attagtgctttaaatataaagtct 141
             ||||||||||||||||||| ||||
Sbjct: 93189 attagtgctttaaatataatgtct 93212
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>gb|AC026776.4|AC026776 Homo sapiens chromosome 21 clone CTC-304G18, complete sequence
          Length = 136653

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 118   attagtgctttaaatataaagtct 141
             ||||||||||||||||||| ||||
Sbjct: 93189 attagtgctttaaatataatgtct 93212
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>dbj|AP000031.1| Homo sapiens genomic DNA, chromosome 21q22.1, segment 2/28, complete
             sequence
          Length = 149298

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 118   attagtgctttaaatataaagtct 141
             ||||||||||||||||||| ||||
Sbjct: 87520 attagtgctttaaatataatgtct 87497
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>gb|AC093025.5| Homo sapiens 12 BAC RP11-384P14 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 82457

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 132   tataaagtctgtttttcattgaag 155
             |||||||| |||||||||||||||
Sbjct: 81700 tataaagtttgtttttcattgaag 81677
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>gb|AF011889.1|AF011889 Human Xq28 cosmids U126G1, U142F2, U69B6, U145C10, U169A5, U84H1, U24D12,
              U80A7, U153E6, L35485, and R7-163A8 containing iduronate
              2-sulfatase gene and pseudogene, complete sequence
          Length = 326663

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 217    ttattttaaaagtcatattg 236
              ||||||||||||||||||||
Sbjct: 151828 ttattttaaaagtcatattg 151847
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>gb|AC138391.2| Homo sapiens chromosome 3 clone RP11-167C9, complete sequence
          Length = 184254

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 57    aactgtttatattttctacc 76
             ||||||||||||||||||||
Sbjct: 28099 aactgtttatattttctacc 28118
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>gb|AC079068.11| Homo sapiens chromosome 15, clone RP11-90A19, complete sequence
          Length = 137541

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 122   gtgctttaaatataaagtct 141
             ||||||||||||||||||||
Sbjct: 76862 gtgctttaaatataaagtct 76843
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>dbj|AP007256.1| Danio rerio DNA, clone:DKEY-188F22, complete sequence
          Length = 155274

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 167    taaaggaattttattgggta 186
              ||||||||||||||||||||
Sbjct: 153355 taaaggaattttattgggta 153374
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>emb|BX005073.7| Zebrafish DNA sequence from clone CH211-129N18, complete sequence
          Length = 185849

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 26     cagtgaatcaacatgatttaatga 49
              ||||||||| ||||||||||||||
Sbjct: 152754 cagtgaatcgacatgatttaatga 152777
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>dbj|BS000114.1| Pan troglodytes chromosome 22 clone:RP43-168A22, map 22, complete
             sequences
          Length = 173403

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 118   attagtgctttaaatataaagtct 141
             ||||||||||||||||||| ||||
Sbjct: 33768 attagtgctttaaatataatgtct 33745
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>dbj|BS000113.1| Pan troglodytes chromosome 22 clone:RP43-098E13, map 22, complete
              sequences
          Length = 172432

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 118    attagtgctttaaatataaagtct 141
              ||||||||||||||||||| ||||
Sbjct: 163908 attagtgctttaaatataatgtct 163885
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>gb|AC154123.9| Mus musculus chromosome 5, clone RP24-324D14, complete sequence
          Length = 175751

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 170   aggaattttattgggtattt 189
             ||||||||||||||||||||
Sbjct: 70254 aggaattttattgggtattt 70235
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>emb|CT574592.2| Pan troglodytes chromosome X clone PTB-082B15 map Xq28, complete sequence
          Length = 228540

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 217    ttattttaaaagtcatattg 236
              ||||||||||||||||||||
Sbjct: 112917 ttattttaaaagtcatattg 112936
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>dbj|AP001711.1| Homo sapiens genomic DNA, chromosome 21q, section 55/105
          Length = 340000

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 118    attagtgctttaaatataaagtct 141
              ||||||||||||||||||| ||||
Sbjct: 334526 attagtgctttaaatataatgtct 334503
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>gb|AC156027.2| Mus musculus BAC clone RP23-55O17 from chromosome 17, complete sequence
          Length = 214723

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 434    ccatgatcaatgctacttat 453
              ||||||||||||||||||||
Sbjct: 133547 ccatgatcaatgctacttat 133528
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>gb|AC130661.14| Mus musculus chromosome 12, clone RP23-337K17, complete sequence
          Length = 199656

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 494    ttctgattcatataaatgacaaag 517
              |||||||||| |||||||||||||
Sbjct: 190790 ttctgattcaaataaatgacaaag 190813
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>emb|AL121992.24|HSDJ680D5 Human DNA sequence from clone RP4-680D5 on chromosome 1p36.13-36.31
              Contains the 3' end of the gene for a novel DnaJ
              domain-containing protein (KIAA0962, FLJ13743, FLJ12468),
              the AGMAT gene for agmatine ureohydrolase (agmatinase), a
              novel gene (FLJ34180), a novel pseudogene similar to Mus
              musculus ethanol induced 6 (Etohi6), a CD24 antigen (small
              cell lung carcinoma cluster 4 antigen) (CD24) pseudogene,
              the gene for DNA-damage inducible protein 2 (DDI2), the
              RSC1A1 gene for regulatory solute carrier protein family 1
              member 1 and the 5' end of the gene for a novel RUN and PH
              domain-containing protein (KIAA0842), complete sequence
          Length = 170399

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 216    tttattttaaaagtcatatt 235
              ||||||||||||||||||||
Sbjct: 130983 tttattttaaaagtcatatt 131002
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>emb|AL683811.6| Mouse DNA sequence from clone RP23-291K22 on chromosome 4, complete
              sequence
          Length = 171213

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 159    tgatcttataaaggaatttt 178
              ||||||||||||||||||||
Sbjct: 135420 tgatcttataaaggaatttt 135401
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>emb|AL117258.4|CNS01DRI Human chromosome 14 DNA sequence BAC R-244E17 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 157827

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 220   ttttaaaagtcatattgtac 239
             ||||||||||||||||||||
Sbjct: 51248 ttttaaaagtcatattgtac 51267
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>dbj|AP000255.2| Homo sapiens genomic DNA, chromosome 21q22.1,21S226-AML region, D,
            clone:PQ119B8
          Length = 64512

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 118  attagtgctttaaatataaagtct 141
            ||||||||||||||||||| ||||
Sbjct: 2734 attagtgctttaaatataatgtct 2711
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>dbj|AP000213.1| Homo sapiens genomic DNA, chromosome 21q22.1, D21S226-AML region, clone
             f43D11-119B8, segment 11/12, complete sequence
          Length = 100000

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 118   attagtgctttaaatataaagtct 141
             ||||||||||||||||||| ||||
Sbjct: 47514 attagtgctttaaatataatgtct 47491
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>emb|AL672005.7| Mouse DNA sequence from clone RP23-401A9 on chromosome X, complete
             sequence
          Length = 123180

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 170   aggaattttattgggtattt 189
             ||||||||||||||||||||
Sbjct: 46934 aggaattttattgggtattt 46953


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7,400,052
Number of Sequences: 3902068
Number of extensions: 7400052
Number of successful extensions: 162576
Number of sequences better than 10.0: 62
Number of HSP's better than 10.0 without gapping: 62
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 162379
Number of HSP's gapped (non-prelim): 197
length of query: 551
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 528
effective length of database: 17,143,297,704
effective search space: 9051661187712
effective search space used: 9051661187712
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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