ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags16p15
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK122040.1| Oryza sativa (japonica cultivar-group) cDNA clon... 80 2e-12
2gb|AY103680.1| Zea mays PCO080984 mRNA sequence 72 4e-10
3gb|BT018784.1| Zea mays clone EL01N0527D07.d mRNA sequence 66 2e-08
4gb|AY108406.1| Zea mays PCO080983 mRNA sequence 66 2e-08
5ref|NM_189556.2| Oryza sativa (japonica cultivar-group), mRNA 62 4e-07
6dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 62 4e-07
7dbj|AP003118.2| Oryza sativa (japonica cultivar-group) genomic D... 62 4e-07
8dbj|AP003047.2| Oryza sativa (japonica cultivar-group) genomic D... 62 4e-07
9dbj|AK100676.1| Oryza sativa (japonica cultivar-group) cDNA clon... 62 4e-07
10dbj|AK061691.1| Oryza sativa (japonica cultivar-group) cDNA clon... 58 6e-06
11ref|NM_180653.1| Arabidopsis thaliana ATP binding AT1G79920 tran... 48 0.006
12ref|NM_106641.3| Arabidopsis thaliana ATP binding AT1G79920 tran... 48 0.006
13gb|BT000810.1| Arabidopsis thaliana At1g79920 mRNA sequence 48 0.006
14gb|AY065177.1| Arabidopsis thaliana putative heat-shock protein ... 48 0.006
15gb|AC011717.6|AC011717 Arabidopsis thaliana chromosome 1 BAC F19... 48 0.006
16ref|XM_417113.1| PREDICTED: Gallus gallus similar to Heat-shock ... 44 0.087
17ref|NM_106642.3| Arabidopsis thaliana HSP91 AT1G79930 (HSP91) tr... 42 0.34
18ref|NM_001036228.1| Arabidopsis thaliana HSP91 AT1G79930 (HSP91)... 42 0.34
19ref|XM_382126.1| Gibberella zeae PH-1 chromosome 1 hypothetical ... 42 0.34
20gb|AC116326.5| Mus musculus BAC clone RP24-64C6 from chromosome ... 42 0.34
21ref|XM_535145.2| PREDICTED: Canis familiaris similar to coiled-c... 42 0.34
22emb|Z70314.1|ATHSP91 A.thaliana mRNA for heat-shock protein 42 0.34
23gb|AY079015.1| Arabidopsis thaliana At1g79930/F19K16_11 mRNA, co... 42 0.34
24gb|AC151837.4| Mus musculus BAC clone RP23-330A14 from chromosom... 42 0.34
25gb|BT002625.1| Arabidopsis thaliana At1g79930/F19K16_11 gene, co... 42 0.34
26gb|AC009322.1|AC009322 Arabidopsis thaliana chromosome I BAC F18... 42 0.34
27ref|XM_954628.1| Neurospora crassa OR74A hypothetical protein (N... 40 1.4
28ref|XM_331176.1| Neurospora crassa OR74A hypothetical protein (N... 40 1.4
29emb|AL390729.23| Human DNA sequence from clone RP3-522D1 on chro... 40 1.4
30gb|CP000002.2| Bacillus licheniformis ATCC 14580, complete genome 38 5.4
31gb|AE017333.1| Bacillus licheniformis DSM 13, complete genome 38 5.4
32ref|XM_582303.2| PREDICTED: Bos taurus similar to CG14407-PA (LO... 38 5.4
33gb|BC077280.1| Xenopus laevis hypothetical protein LOC398863, mR... 38 5.4
34gb|BC003770.1| Mus musculus heat shock protein 4, mRNA (cDNA clo... 38 5.4
35ref|XM_959348.1| Neurospora crassa OR74A hypothetical protein (N... 38 5.4
36ref|XM_330388.1| Neurospora crassa OR74A hypothetical protein (N... 38 5.4
37ref|NM_008300.2| Mus musculus heat shock protein 4 (Hspa4), mRNA 38 5.4
38gb|AC123034.5| Mus musculus BAC clone RP24-484E17 from chromosom... 38 5.4
39gb|CP000083.1| Colwellia psychrerythraea 34H, complete genome 38 5.4
40emb|AL596382.12| Mouse DNA sequence from clone RP23-337J7 on chr... 38 5.4
41gb|AC163106.4| Mus musculus BAC clone RP23-278O13 from chromosom... 38 5.4
42dbj|AK220167.1| Mus musculus mRNA for mKIAA4025 protein 38 5.4
43dbj|AK098253.1| Homo sapiens cDNA FLJ40934 fis, clone UTERU20071... 38 5.4
44dbj|AK148883.1| Mus musculus 2 days neonate sympathetic ganglion... 38 5.4
45dbj|AK133772.1| Mus musculus 8 days embryo whole body cDNA, RIKE... 38 5.4
46dbj|AK155305.1| Mus musculus NOD-derived CD11c +ve dendritic cel... 38 5.4
47dbj|AK166102.1| Mus musculus lung RCB-0558 LLC cDNA, RIKEN full-... 38 5.4
48gb|BC016222.1| Mus musculus hypothetical protein LOC544988, mRNA... 38 5.4
49dbj|AK054211.1| Mus musculus 2 days pregnant adult female oviduc... 38 5.4
50dbj|AK053601.1| Mus musculus 0 day neonate eyeball cDNA, RIKEN f... 38 5.4
51gb|AC003037.1|AC003037 Homo sapiens Xp22 BAC GSHB 526D21 (Genome... 38 5.4
52gb|AC008496.6| Homo sapiens chromosome 5 clone CTC-431G16, compl... 38 5.4
53gb|AC147108.3| Mus musculus BAC clone RP24-70D19 from 13, comple... 38 5.4
54gb|AC138609.4| Mus musculus BAC clone RP24-360D18 from 3, comple... 38 5.4
55gb|BC003950.1| Mus musculus cDNA clone IMAGE:3487418, containing... 38 5.4
56gb|AC124325.10| Mus musculus chromosome 7, clone RP24-462O14, co... 38 5.4
57dbj|D85904.1|MUSAPG2 Mouse mRNA for apg-2, complete cds 38 5.4 
>dbj|AK122040.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033113E02, full
            insert sequence
          Length = 3137

 Score = 79.8 bits (40), Expect = 2e-12
 Identities = 97/116 (83%)
 Strand = Plus / Plus

                                                                        
Query: 1    attggctgtatgaagatggcgaggatgagactaagggagtctatgttgcaaaactagaag 60
            |||||||||| |||||||| || |||||||| || || || ||| ||||||| || ||||
Sbjct: 2150 attggctgtacgaagatggtgaagatgagacaaaaggggtttatattgcaaagctggaag 2209

                                                                    
Query: 61   aactgaaaaagcttggcggtcctatcgaaatgcgctacaaagagtggacagaaaga 116
            |||| |||||| |||| | |||||| || || ||||||||||||||| | ||||||
Sbjct: 2210 aacttaaaaaggttggtgatcctattgagatccgctacaaagagtgggctgaaaga 2265
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>gb|AY103680.1| Zea mays PCO080984 mRNA sequence
          Length = 1931

 Score = 71.9 bits (36), Expect = 4e-10
 Identities = 60/68 (88%)
 Strand = Plus / Plus

                                                                        
Query: 3    tggctgtatgaagatggcgaggatgagactaagggagtctatgttgcaaaactagaagaa 62
            ||||| |||||||||||||||||||| |||||||| || ||| |||| || |||||||||
Sbjct: 1078 tggctctatgaagatggcgaggatgaaactaagggggtttatattgctaagctagaagaa 1137

                    
Query: 63   ctgaaaaa 70
            || |||||
Sbjct: 1138 cttaaaaa 1145
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>gb|BT018784.1| Zea mays clone EL01N0527D07.d mRNA sequence
          Length = 2082

 Score = 65.9 bits (33), Expect = 2e-08
 Identities = 54/61 (88%)
 Strand = Plus / Plus

                                                                        
Query: 1    attggctgtatgaagatggcgaggatgagactaagggagtctatgttgcaaaactagaag 60
            ||||||| ||||||||||| ||||||||||| |||||||||||| || | ||||| ||||
Sbjct: 1234 attggctatatgaagatggtgaggatgagacaaagggagtctatatttctaaactggaag 1293

             
Query: 61   a 61
            |
Sbjct: 1294 a 1294
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>gb|AY108406.1| Zea mays PCO080983 mRNA sequence
          Length = 1289

 Score = 65.9 bits (33), Expect = 2e-08
 Identities = 54/61 (88%)
 Strand = Plus / Plus

                                                                       
Query: 1   attggctgtatgaagatggcgaggatgagactaagggagtctatgttgcaaaactagaag 60
           ||||||| ||||||||||| ||||||||||| |||||||||||| || | ||||| ||||
Sbjct: 412 attggctatatgaagatggtgaggatgagacaaagggagtctatatttctaaactggaag 471

            
Query: 61  a 61
           |
Sbjct: 472 a 472
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>ref|NM_189556.2| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3139

 Score = 61.9 bits (31), Expect = 4e-07
 Identities = 61/71 (85%)
 Strand = Plus / Plus

                                                                        
Query: 1    attggctgtatgaagatggcgaggatgagactaagggagtctatgttgcaaaactagaag 60
            ||||| |||| |||||||| ||||||||||| || ||||| |||||||| || || ||||
Sbjct: 2184 attggttgtacgaagatggtgaggatgagaccaaaggagtgtatgttgctaagcttgaag 2243

                       
Query: 61   aactgaaaaag 71
            |||| ||||||
Sbjct: 2244 aacttaaaaag 2254
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 61.9 bits (31), Expect = 4e-07
 Identities = 61/71 (85%)
 Strand = Plus / Plus

                                                                           
Query: 1       attggctgtatgaagatggcgaggatgagactaagggagtctatgttgcaaaactagaag 60
               ||||| |||| |||||||| ||||||||||| || ||||| |||||||| || || ||||
Sbjct: 4257173 attggttgtacgaagatggtgaggatgagaccaaaggagtgtatgttgctaagcttgaag 4257232

                          
Query: 61      aactgaaaaag 71
               |||| ||||||
Sbjct: 4257233 aacttaaaaag 4257243
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>dbj|AP003118.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OJ1174_D05
          Length = 128525

 Score = 61.9 bits (31), Expect = 4e-07
 Identities = 61/71 (85%)
 Strand = Plus / Plus

                                                                         
Query: 1     attggctgtatgaagatggcgaggatgagactaagggagtctatgttgcaaaactagaag 60
             ||||| |||| |||||||| ||||||||||| || ||||| |||||||| || || ||||
Sbjct: 95140 attggttgtacgaagatggtgaggatgagaccaaaggagtgtatgttgctaagcttgaag 95199

                        
Query: 61    aactgaaaaag 71
             |||| ||||||
Sbjct: 95200 aacttaaaaag 95210
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>dbj|AP003047.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0666G04
          Length = 141983

 Score = 61.9 bits (31), Expect = 4e-07
 Identities = 61/71 (85%)
 Strand = Plus / Plus

                                                                         
Query: 1     attggctgtatgaagatggcgaggatgagactaagggagtctatgttgcaaaactagaag 60
             ||||| |||| |||||||| ||||||||||| || ||||| |||||||| || || ||||
Sbjct: 36943 attggttgtacgaagatggtgaggatgagaccaaaggagtgtatgttgctaagcttgaag 37002

                        
Query: 61    aactgaaaaag 71
             |||| ||||||
Sbjct: 37003 aacttaaaaag 37013
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>dbj|AK100676.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023113C17, full
            insert sequence
          Length = 3139

 Score = 61.9 bits (31), Expect = 4e-07
 Identities = 61/71 (85%)
 Strand = Plus / Plus

                                                                        
Query: 1    attggctgtatgaagatggcgaggatgagactaagggagtctatgttgcaaaactagaag 60
            ||||| |||| |||||||| ||||||||||| || ||||| |||||||| || || ||||
Sbjct: 2184 attggttgtacgaagatggtgaggatgagaccaaaggagtgtatgttgctaagcttgaag 2243

                       
Query: 61   aactgaaaaag 71
            |||| ||||||
Sbjct: 2244 aacttaaaaag 2254
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>dbj|AK061691.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-037-C02, full
           insert sequence
          Length = 1144

 Score = 58.0 bits (29), Expect = 6e-06
 Identities = 56/65 (86%)
 Strand = Plus / Plus

                                                                       
Query: 7   tgtatgaagatggcgaggatgagactaagggagtctatgttgcaaaactagaagaactga 66
           |||| |||||||| ||||||||||| || ||||| |||||||| || || |||||||| |
Sbjct: 260 tgtacgaagatggtgaggatgagaccaaaggagtgtatgttgctaagcttgaagaactta 319

                
Query: 67  aaaag 71
           |||||
Sbjct: 320 aaaag 324
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>ref|NM_180653.1| Arabidopsis thaliana ATP binding AT1G79920 transcript variant
            AT1G79920.1 mRNA, complete cds
          Length = 2941

 Score = 48.1 bits (24), Expect = 0.006
 Identities = 45/52 (86%)
 Strand = Plus / Plus

                                                                
Query: 1    attggctgtatgaagatggcgaggatgagactaagggagtctatgttgcaaa 52
            ||||| ||||||||||||| || |||||||| || || || |||||||||||
Sbjct: 2127 attggttgtatgaagatggggaagatgagaccaaaggtgtttatgttgcaaa 2178
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>ref|NM_106641.3| Arabidopsis thaliana ATP binding AT1G79920 transcript variant
            AT1G79920.2 mRNA, complete cds
          Length = 2941

 Score = 48.1 bits (24), Expect = 0.006
 Identities = 45/52 (86%)
 Strand = Plus / Plus

                                                                
Query: 1    attggctgtatgaagatggcgaggatgagactaagggagtctatgttgcaaa 52
            ||||| ||||||||||||| || |||||||| || || || |||||||||||
Sbjct: 2127 attggttgtatgaagatggggaagatgagaccaaaggtgtttatgttgcaaa 2178
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>gb|BT000810.1| Arabidopsis thaliana At1g79920 mRNA sequence
          Length = 2952

 Score = 48.1 bits (24), Expect = 0.006
 Identities = 45/52 (86%)
 Strand = Plus / Plus

                                                                
Query: 1    attggctgtatgaagatggcgaggatgagactaagggagtctatgttgcaaa 52
            ||||| ||||||||||||| || |||||||| || || || |||||||||||
Sbjct: 2121 attggttgtatgaagatggggaagatgagaccaaaggtgtttatgttgcaaa 2172
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>gb|AY065177.1| Arabidopsis thaliana putative heat-shock protein (At1g79920;
            F19K16.12) mRNA, complete cds
          Length = 2850

 Score = 48.1 bits (24), Expect = 0.006
 Identities = 45/52 (86%)
 Strand = Plus / Plus

                                                                
Query: 1    attggctgtatgaagatggcgaggatgagactaagggagtctatgttgcaaa 52
            ||||| ||||||||||||| || |||||||| || || || |||||||||||
Sbjct: 2128 attggttgtatgaagatggggaagatgagaccaaaggtgtttatgttgcaaa 2179
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>gb|AC011717.6|AC011717 Arabidopsis thaliana chromosome 1 BAC F19K16 genomic sequence, complete
             sequence
          Length = 111301

 Score = 48.1 bits (24), Expect = 0.006
 Identities = 45/52 (86%)
 Strand = Plus / Plus

                                                                 
Query: 1     attggctgtatgaagatggcgaggatgagactaagggagtctatgttgcaaa 52
             ||||| ||||||||||||| || |||||||| || || || |||||||||||
Sbjct: 44455 attggttgtatgaagatggggaagatgagaccaaaggtgtttatgttgcaaa 44506



 Score = 42.1 bits (21), Expect = 0.34
 Identities = 42/49 (85%)
 Strand = Plus / Plus

                                                              
Query: 1     attggctgtatgaagatggcgaggatgagactaagggagtctatgttgc 49
             ||||| ||||||||||||| || |||||||| || || || ||||||||
Sbjct: 39610 attggttgtatgaagatggggaagatgagaccaaaggtgtttatgttgc 39658
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>ref|XM_417113.1| PREDICTED: Gallus gallus similar to Heat-shock protein 105 kDa (Heat
            shock 110 kDa protein) (Antigen NY-CO-25) (LOC418917),
            mRNA
          Length = 3791

 Score = 44.1 bits (22), Expect = 0.087
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 3    tggctgtatgaagatggcgaggatga 28
            |||||||||||||| |||||||||||
Sbjct: 2581 tggctgtatgaagagggcgaggatga 2606
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>ref|NM_106642.3| Arabidopsis thaliana HSP91 AT1G79930 (HSP91) transcript variant
            AT1G79930.1 mRNA, complete cds
          Length = 2949

 Score = 42.1 bits (21), Expect = 0.34
 Identities = 42/49 (85%)
 Strand = Plus / Plus

                                                             
Query: 1    attggctgtatgaagatggcgaggatgagactaagggagtctatgttgc 49
            ||||| ||||||||||||| || |||||||| || || || ||||||||
Sbjct: 2135 attggttgtatgaagatggggaagatgagaccaaaggtgtttatgttgc 2183
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>ref|NM_001036228.1| Arabidopsis thaliana HSP91 AT1G79930 (HSP91) transcript variant
            AT1G79930.2 mRNA, complete cds
          Length = 3012

 Score = 42.1 bits (21), Expect = 0.34
 Identities = 42/49 (85%)
 Strand = Plus / Plus

                                                             
Query: 1    attggctgtatgaagatggcgaggatgagactaagggagtctatgttgc 49
            ||||| ||||||||||||| || |||||||| || || || ||||||||
Sbjct: 2179 attggttgtatgaagatggggaagatgagaccaaaggtgtttatgttgc 2227
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>ref|XM_382126.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG01950.1)
            partial mRNA
          Length = 2337

 Score = 42.1 bits (21), Expect = 0.34
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 1    attggctgtatgaagatggcgagga 25
            |||||||||| ||||||||||||||
Sbjct: 2063 attggctgtacgaagatggcgagga 2087
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>gb|AC116326.5| Mus musculus BAC clone RP24-64C6 from chromosome 7, complete sequence
          Length = 181548

 Score = 42.1 bits (21), Expect = 0.34
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 50   aaaactagaagaactgaaaaa 70
            |||||||||||||||||||||
Sbjct: 2154 aaaactagaagaactgaaaaa 2134
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>ref|XM_535145.2| PREDICTED: Canis familiaris similar to coiled-coil domain
           containing 7 (LOC477958), mRNA
          Length = 1842

 Score = 42.1 bits (21), Expect = 0.34
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 50  aaaactagaagaactgaaaaa 70
           |||||||||||||||||||||
Sbjct: 603 aaaactagaagaactgaaaaa 623
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>emb|Z70314.1|ATHSP91 A.thaliana mRNA for heat-shock protein
          Length = 2923

 Score = 42.1 bits (21), Expect = 0.34
 Identities = 42/49 (85%)
 Strand = Plus / Plus

                                                             
Query: 1    attggctgtatgaagatggcgaggatgagactaagggagtctatgttgc 49
            ||||| ||||||||||||| || |||||||| || || || ||||||||
Sbjct: 2138 attggttgtatgaagatggggaagatgagaccaaaggtgtttatgttgc 2186
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>gb|AY079015.1| Arabidopsis thaliana At1g79930/F19K16_11 mRNA, complete cds
          Length = 2798

 Score = 42.1 bits (21), Expect = 0.34
 Identities = 42/49 (85%)
 Strand = Plus / Plus

                                                             
Query: 1    attggctgtatgaagatggcgaggatgagactaagggagtctatgttgc 49
            ||||| ||||||||||||| || |||||||| || || || ||||||||
Sbjct: 2135 attggttgtatgaagatggggaagatgagaccaaaggtgtttatgttgc 2183
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>gb|AC151837.4| Mus musculus BAC clone RP23-330A14 from chromosome 7, complete sequence
          Length = 209661

 Score = 42.1 bits (21), Expect = 0.34
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 50    aaaactagaagaactgaaaaa 70
             |||||||||||||||||||||
Sbjct: 51728 aaaactagaagaactgaaaaa 51708
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>gb|BT002625.1| Arabidopsis thaliana At1g79930/F19K16_11 gene, complete cds
          Length = 2496

 Score = 42.1 bits (21), Expect = 0.34
 Identities = 42/49 (85%)
 Strand = Plus / Plus

                                                             
Query: 1    attggctgtatgaagatggcgaggatgagactaagggagtctatgttgc 49
            ||||| ||||||||||||| || |||||||| || || || ||||||||
Sbjct: 1985 attggttgtatgaagatggggaagatgagaccaaaggtgtttatgttgc 2033
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>gb|AC009322.1|AC009322 Arabidopsis thaliana chromosome I BAC F18B13 genomic sequence,
            complete sequence
          Length = 116905

 Score = 42.1 bits (21), Expect = 0.34
 Identities = 42/49 (85%)
 Strand = Plus / Minus

                                                             
Query: 1    attggctgtatgaagatggcgaggatgagactaagggagtctatgttgc 49
            ||||| ||||||||||||| || |||||||| || || || ||||||||
Sbjct: 1334 attggttgtatgaagatggggaagatgagaccaaaggtgtttatgttgc 1286
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>ref|XM_954628.1| Neurospora crassa OR74A hypothetical protein (NCU02401.1) partial
           mRNA
          Length = 2124

 Score = 40.1 bits (20), Expect = 1.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 10  atgaagatggcgaggatgag 29
           ||||||||||||||||||||
Sbjct: 514 atgaagatggcgaggatgag 495
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>ref|XM_331176.1| Neurospora crassa OR74A hypothetical protein (NCU02401.1) partial
           mRNA
          Length = 2124

 Score = 40.1 bits (20), Expect = 1.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 10  atgaagatggcgaggatgag 29
           ||||||||||||||||||||
Sbjct: 514 atgaagatggcgaggatgag 495
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>emb|AL390729.23| Human DNA sequence from clone RP3-522D1 on chromosome 1 Contains the 5'
             end of a novel gene, a novel gene, a ribosomal protein L39
             (RPL39) pseudogene and a CpG island, complete sequence
          Length = 69656

 Score = 40.1 bits (20), Expect = 1.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 47    tgcaaaactagaagaactgaaaaa 70
             ||||||||| ||||||||||||||
Sbjct: 33777 tgcaaaactcgaagaactgaaaaa 33754
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>gb|CP000002.2| Bacillus licheniformis ATCC 14580, complete genome
          Length = 4222334

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 55     tagaagaactgaaaaagct 73
              |||||||||||||||||||
Sbjct: 801098 tagaagaactgaaaaagct 801080
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>gb|AE017333.1| Bacillus licheniformis DSM 13, complete genome
          Length = 4222645

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 55     tagaagaactgaaaaagct 73
              |||||||||||||||||||
Sbjct: 800883 tagaagaactgaaaaagct 800865
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>ref|XM_582303.2| PREDICTED: Bos taurus similar to CG14407-PA (LOC505935), mRNA
          Length = 1037

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 55  tagaagaactgaaaaagct 73
           |||||||||||||||||||
Sbjct: 479 tagaagaactgaaaaagct 497
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>gb|BC077280.1| Xenopus laevis hypothetical protein LOC398863, mRNA (cDNA clone
            MGC:80061 IMAGE:4404521), complete cds
          Length = 2648

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 1    attggctgtatgaagatgg 19
            |||||||||||||||||||
Sbjct: 2033 attggctgtatgaagatgg 2051
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>gb|BC003770.1| Mus musculus heat shock protein 4, mRNA (cDNA clone MGC:5961
            IMAGE:3494648), complete cds
          Length = 2832

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 1    attggctgtatgaagatgg 19
            |||||||||||||||||||
Sbjct: 2195 attggctgtatgaagatgg 2213
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>ref|XM_959348.1| Neurospora crassa OR74A hypothetical protein (NCU09739.1) partial
            mRNA
          Length = 2028

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 22   aggatgagactaagggagt 40
            |||||||||||||||||||
Sbjct: 1621 aggatgagactaagggagt 1639
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>ref|XM_330388.1| Neurospora crassa OR74A hypothetical protein (NCU09739.1) partial
            mRNA
          Length = 2028

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 22   aggatgagactaagggagt 40
            |||||||||||||||||||
Sbjct: 1621 aggatgagactaagggagt 1639
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>ref|NM_008300.2| Mus musculus heat shock protein 4 (Hspa4), mRNA
          Length = 2832

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 1    attggctgtatgaagatgg 19
            |||||||||||||||||||
Sbjct: 2195 attggctgtatgaagatgg 2213
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>gb|AC123034.5| Mus musculus BAC clone RP24-484E17 from chromosome 13, complete
             sequence
          Length = 177675

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 33    aagggagtctatgttgcaa 51
             |||||||||||||||||||
Sbjct: 64211 aagggagtctatgttgcaa 64193
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>gb|CP000083.1| Colwellia psychrerythraea 34H, complete genome
          Length = 5373180

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                      
Query: 48      gcaaaactagaagaactgaaaaa 70
               ||||||||||||||||| |||||
Sbjct: 3295220 gcaaaactagaagaacttaaaaa 3295242
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>emb|AL596382.12| Mouse DNA sequence from clone RP23-337J7 on chromosome 11, complete
              sequence
          Length = 225083

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 1      attggctgtatgaagatgg 19
              |||||||||||||||||||
Sbjct: 197438 attggctgtatgaagatgg 197420
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>gb|AC163106.4| Mus musculus BAC clone RP23-278O13 from chromosome 3, complete sequence
          Length = 200512

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 99     aaagagtggacagaaagag 117
              |||||||||||||||||||
Sbjct: 154092 aaagagtggacagaaagag 154074
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>dbj|AK220167.1| Mus musculus mRNA for mKIAA4025 protein
          Length = 4596

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 1    attggctgtatgaagatgg 19
            |||||||||||||||||||
Sbjct: 2240 attggctgtatgaagatgg 2258
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>dbj|AK098253.1| Homo sapiens cDNA FLJ40934 fis, clone UTERU2007128, highly similar
           to Spondyloepiphyseal dysplasia, late
          Length = 3138

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 47  tgcaaaactagaagaactg 65
           |||||||||||||||||||
Sbjct: 205 tgcaaaactagaagaactg 187
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>dbj|AK148883.1| Mus musculus 2 days neonate sympathetic ganglion cDNA, RIKEN
           full-length enriched library, clone:7120459D23
           product:heat shock protein 4, full insert sequence
          Length = 2914

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 1   attggctgtatgaagatgg 19
           |||||||||||||||||||
Sbjct: 564 attggctgtatgaagatgg 582
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>dbj|AK133772.1| Mus musculus 8 days embryo whole body cDNA, RIKEN full-length
            enriched library, clone:5730411E21 product:heat shock
            protein 4, full insert sequence
          Length = 2825

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 1    attggctgtatgaagatgg 19
            |||||||||||||||||||
Sbjct: 2232 attggctgtatgaagatgg 2250
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>dbj|AK155305.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN
            full-length enriched library, clone:F630217L11
            product:heat shock protein 4, full insert sequence
          Length = 2792

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 1    attggctgtatgaagatgg 19
            |||||||||||||||||||
Sbjct: 2206 attggctgtatgaagatgg 2224
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>dbj|AK166102.1| Mus musculus lung RCB-0558 LLC cDNA, RIKEN full-length enriched
            library, clone:G730038N22 product:heat shock protein 4,
            full insert sequence
          Length = 2867

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 1    attggctgtatgaagatgg 19
            |||||||||||||||||||
Sbjct: 2272 attggctgtatgaagatgg 2290
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>gb|BC016222.1| Mus musculus hypothetical protein LOC544988, mRNA (cDNA clone
           IMAGE:4486605), containing frame-shift errors
          Length = 748

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 52  aactagaagaactgaaaaa 70
           |||||||||||||||||||
Sbjct: 715 aactagaagaactgaaaaa 733
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>dbj|AK054211.1| Mus musculus 2 days pregnant adult female oviduct cDNA, RIKEN
            full-length enriched library, clone:E230031A04
            product:heat shock 70 kDa protein 4, full insert sequence
          Length = 1866

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 1    attggctgtatgaagatgg 19
            |||||||||||||||||||
Sbjct: 1011 attggctgtatgaagatgg 1029
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>dbj|AK053601.1| Mus musculus 0 day neonate eyeball cDNA, RIKEN full-length enriched
            library, clone:E130113D20 product:heat shock 70 kDa
            protein 4, full insert sequence
          Length = 3075

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 1    attggctgtatgaagatgg 19
            |||||||||||||||||||
Sbjct: 2223 attggctgtatgaagatgg 2241
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>gb|AC003037.1|AC003037 Homo sapiens Xp22 BAC GSHB 526D21 (Genome Systems Human BAC library)
             complete sequence
          Length = 213863

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 47    tgcaaaactagaagaactg 65
             |||||||||||||||||||
Sbjct: 25212 tgcaaaactagaagaactg 25230
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>gb|AC008496.6| Homo sapiens chromosome 5 clone CTC-431G16, complete sequence
          Length = 135434

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 50    aaaactagaagaactgaaa 68
             |||||||||||||||||||
Sbjct: 27074 aaaactagaagaactgaaa 27092
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>gb|AC147108.3| Mus musculus BAC clone RP24-70D19 from 13, complete sequence
          Length = 188893

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 33     aagggagtctatgttgcaa 51
              |||||||||||||||||||
Sbjct: 143482 aagggagtctatgttgcaa 143464
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>gb|AC138609.4| Mus musculus BAC clone RP24-360D18 from 3, complete sequence
          Length = 151011

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 99     aaagagtggacagaaagag 117
              |||||||||||||||||||
Sbjct: 103103 aaagagtggacagaaagag 103121
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>gb|BC003950.1| Mus musculus cDNA clone IMAGE:3487418, containing frame-shift errors
          Length = 2785

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 1    attggctgtatgaagatgg 19
            |||||||||||||||||||
Sbjct: 2182 attggctgtatgaagatgg 2200
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>gb|AC124325.10| Mus musculus chromosome 7, clone RP24-462O14, complete sequence
          Length = 137613

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 10    atgaagatggcgaggatga 28
             |||||||||||||||||||
Sbjct: 55796 atgaagatggcgaggatga 55814
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>dbj|D85904.1|MUSAPG2 Mouse mRNA for apg-2, complete cds
          Length = 2582

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 1    attggctgtatgaagatgg 19
            |||||||||||||||||||
Sbjct: 1988 attggctgtatgaagatgg 2006


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 943,895
Number of Sequences: 3902068
Number of extensions: 943895
Number of successful extensions: 67582
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 57
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 67451
Number of HSP's gapped (non-prelim): 131
length of query: 117
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 96
effective length of database: 17,151,101,840
effective search space: 1646505776640
effective search space used: 1646505776640
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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