ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags16p10 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_473293.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1497 Score = 605 bits (305), Expect = e-170 Identities = 497/561 (88%) Strand = Plus / Plus Query: 5 catttaattgtggggacgcctggtcgagttttggaccttacaaagaaaggcatttgcatt 64 |||||| |||| || || |||||||| |||| ||||||||||||||||| | ||| | Sbjct: 730 catttacttgttggaactcctggtcgcattttagaccttacaaagaaaggtgtctgcgtc 789 Query: 65 ctgaaggactgttcaatgcttattatggatgaggcagacaagcttctttctcccgagttc 124 |||||| |||||||||||||| ||||||||||||||||||||||||||||||| |||||| Sbjct: 790 ctgaagaactgttcaatgcttgttatggatgaggcagacaagcttctttctcctgagttc 849 Query: 125 caaccttctgtggagcagttaattcgataccttccatcgagtcgacagattctaatgttc 184 ||||| ||| | || | || ||||| || |||||||||| ||| || ||| | |||||| Sbjct: 850 caaccgtctattcaggaattgattcggtatcttccatcgaatcggcaaattttgatgttc 909 Query: 185 tctgcaacattcccggtcactgtcaaggctttcaaggacaaatatctgcctaaaccctat 244 |||||||||||||| || |||||||||| ||||||||||||||||| |||||||||||| Sbjct: 910 tctgcaacattccctgtgactgtcaaggagttcaaggacaaatatctccctaaaccctat 969 Query: 245 gttattaatcttatggacgaacttacattgaagggaattacccagttctacgcttttgtt 304 || ||||| |||||||| ||||||||||||||||||||||| ||||| || ||||||||| Sbjct: 970 gtcattaaccttatggatgaacttacattgaagggaattacacagttttatgcttttgtt 1029 Query: 305 gaagaaaggcagaaagtccattgtctgaacactcttttttccaagctgcaaattaatcaa 364 ||||| |||||||||||||| ||||| || |||||||||||||||||||||||||||||| Sbjct: 1030 gaagagaggcagaaagtccactgtcttaatactcttttttccaagctgcaaattaatcaa 1089 Query: 365 tctataatattctgtaactccgtaaatcgtgttgaactactggcgaagaagatcacagag 424 || ||||||||||||||||| |||||||||||||||||| |||| ||||||||||||||| Sbjct: 1090 tcgataatattctgtaactcggtaaatcgtgttgaactattggcaaagaagatcacagag 1149 Query: 425 cttggttactcttgcttctacatccatgctaaaatgctgcaggatcatcgtaatagagta 484 |||||||| ||||||||||| ||||||||||||||| |||| || ||||| || || || Sbjct: 1150 cttggttattcttgcttctatatccatgctaaaatgttgcaagaccatcggaacagggtt 1209 Query: 485 ttccatgatttccgtaatggcgcatgcaggaaccttgtgtgtacagatctttttacaagg 544 ||||||||||| || ||||| |||||||||||| | || ||||||||||||||||||||| Sbjct: 1210 ttccatgattttcgcaatggtgcatgcaggaacttggtttgtacagatctttttacaagg 1269 Query: 545 ggaatagatattcaagctgtt 565 ||||||||||| ||||||||| Sbjct: 1270 ggaatagatatccaagctgtt 1290
>dbj|AK101477.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033040P11, full insert sequence Length = 2148 Score = 605 bits (305), Expect = e-170 Identities = 497/561 (88%) Strand = Plus / Plus Query: 5 catttaattgtggggacgcctggtcgagttttggaccttacaaagaaaggcatttgcatt 64 |||||| |||| || || |||||||| |||| ||||||||||||||||| | ||| | Sbjct: 898 catttacttgttggaactcctggtcgcattttagaccttacaaagaaaggtgtctgcgtc 957 Query: 65 ctgaaggactgttcaatgcttattatggatgaggcagacaagcttctttctcccgagttc 124 |||||| |||||||||||||| ||||||||||||||||||||||||||||||| |||||| Sbjct: 958 ctgaagaactgttcaatgcttgttatggatgaggcagacaagcttctttctcctgagttc 1017 Query: 125 caaccttctgtggagcagttaattcgataccttccatcgagtcgacagattctaatgttc 184 ||||| ||| | || | || ||||| || |||||||||| ||| || ||| | |||||| Sbjct: 1018 caaccgtctattcaggaattgattcggtatcttccatcgaatcggcaaattttgatgttc 1077 Query: 185 tctgcaacattcccggtcactgtcaaggctttcaaggacaaatatctgcctaaaccctat 244 |||||||||||||| || |||||||||| ||||||||||||||||| |||||||||||| Sbjct: 1078 tctgcaacattccctgtgactgtcaaggagttcaaggacaaatatctccctaaaccctat 1137 Query: 245 gttattaatcttatggacgaacttacattgaagggaattacccagttctacgcttttgtt 304 || ||||| |||||||| ||||||||||||||||||||||| ||||| || ||||||||| Sbjct: 1138 gtcattaaccttatggatgaacttacattgaagggaattacacagttttatgcttttgtt 1197 Query: 305 gaagaaaggcagaaagtccattgtctgaacactcttttttccaagctgcaaattaatcaa 364 ||||| |||||||||||||| ||||| || |||||||||||||||||||||||||||||| Sbjct: 1198 gaagagaggcagaaagtccactgtcttaatactcttttttccaagctgcaaattaatcaa 1257 Query: 365 tctataatattctgtaactccgtaaatcgtgttgaactactggcgaagaagatcacagag 424 || ||||||||||||||||| |||||||||||||||||| |||| ||||||||||||||| Sbjct: 1258 tcgataatattctgtaactcggtaaatcgtgttgaactattggcaaagaagatcacagag 1317 Query: 425 cttggttactcttgcttctacatccatgctaaaatgctgcaggatcatcgtaatagagta 484 |||||||| ||||||||||| ||||||||||||||| |||| || ||||| || || || Sbjct: 1318 cttggttattcttgcttctatatccatgctaaaatgttgcaagaccatcggaacagggtt 1377 Query: 485 ttccatgatttccgtaatggcgcatgcaggaaccttgtgtgtacagatctttttacaagg 544 ||||||||||| || ||||| |||||||||||| | || ||||||||||||||||||||| Sbjct: 1378 ttccatgattttcgcaatggtgcatgcaggaacttggtttgtacagatctttttacaagg 1437 Query: 545 ggaatagatattcaagctgtt 565 ||||||||||| ||||||||| Sbjct: 1438 ggaatagatatccaagctgtt 1458
>dbj|AK071636.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023100C24, full insert sequence Length = 2205 Score = 605 bits (305), Expect = e-170 Identities = 497/561 (88%) Strand = Plus / Plus Query: 5 catttaattgtggggacgcctggtcgagttttggaccttacaaagaaaggcatttgcatt 64 |||||| |||| || || |||||||| |||| ||||||||||||||||| | ||| | Sbjct: 872 catttacttgttggaactcctggtcgcattttagaccttacaaagaaaggtgtctgcgtc 931 Query: 65 ctgaaggactgttcaatgcttattatggatgaggcagacaagcttctttctcccgagttc 124 |||||| |||||||||||||| ||||||||||||||||||||||||||||||| |||||| Sbjct: 932 ctgaagaactgttcaatgcttgttatggatgaggcagacaagcttctttctcctgagttc 991 Query: 125 caaccttctgtggagcagttaattcgataccttccatcgagtcgacagattctaatgttc 184 ||||| ||| | || | || ||||| || |||||||||| ||| || ||| | |||||| Sbjct: 992 caaccgtctattcaggaattgattcggtatcttccatcgaatcggcaaattttgatgttc 1051 Query: 185 tctgcaacattcccggtcactgtcaaggctttcaaggacaaatatctgcctaaaccctat 244 |||||||||||||| || |||||||||| ||||||||||||||||| |||||||||||| Sbjct: 1052 tctgcaacattccctgtgactgtcaaggagttcaaggacaaatatctccctaaaccctat 1111 Query: 245 gttattaatcttatggacgaacttacattgaagggaattacccagttctacgcttttgtt 304 || ||||| |||||||| ||||||||||||||||||||||| ||||| || ||||||||| Sbjct: 1112 gtcattaaccttatggatgaacttacattgaagggaattacacagttttatgcttttgtt 1171 Query: 305 gaagaaaggcagaaagtccattgtctgaacactcttttttccaagctgcaaattaatcaa 364 ||||| |||||||||||||| ||||| || |||||||||||||||||||||||||||||| Sbjct: 1172 gaagagaggcagaaagtccactgtcttaatactcttttttccaagctgcaaattaatcaa 1231 Query: 365 tctataatattctgtaactccgtaaatcgtgttgaactactggcgaagaagatcacagag 424 || ||||||||||||||||| |||||||||||||||||| |||| ||||||||||||||| Sbjct: 1232 tcgataatattctgtaactcggtaaatcgtgttgaactattggcaaagaagatcacagag 1291 Query: 425 cttggttactcttgcttctacatccatgctaaaatgctgcaggatcatcgtaatagagta 484 |||||||| ||||||||||| ||||||||||||||| |||| || ||||| || || || Sbjct: 1292 cttggttattcttgcttctatatccatgctaaaatgttgcaagaccatcggaacagggtt 1351 Query: 485 ttccatgatttccgtaatggcgcatgcaggaaccttgtgtgtacagatctttttacaagg 544 ||||||||||| || ||||| |||||||||||| | || ||||||||||||||||||||| Sbjct: 1352 ttccatgattttcgcaatggtgcatgcaggaacttggtttgtacagatctttttacaagg 1411 Query: 545 ggaatagatattcaagctgtt 565 ||||||||||| ||||||||| Sbjct: 1412 ggaatagatatccaagctgtt 1432
>ref|XM_466991.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2325 Score = 573 bits (289), Expect = e-160 Identities = 493/561 (87%) Strand = Plus / Plus Query: 5 catttaattgtggggacgcctggtcgagttttggaccttacaaagaaaggcatttgcatt 64 |||||| |||| || |||||||| || |||||||||||||||||||||| || |||||| Sbjct: 876 catttacttgttggaacgcctgggcgtattttggaccttacaaagaaaggtatctgcatt 935 Query: 65 ctgaaggactgttcaatgcttattatggatgaggcagacaagcttctttctcccgagttc 124 |||||||||| || |||||||| ||||||||||||||||||||||| ||||| |||||| Sbjct: 936 ttgaaggactgctctatgcttatcatggatgaggcagacaagcttctctctcctgagttc 995 Query: 125 caaccttctgtggagcagttaattcgataccttccatcgagtcgacagattctaatgttc 184 || ||||| ||||| ||| | ||||| ||||||||| |||| || || ||| | |||||| Sbjct: 996 cagccttccgtggaacagctgattcgttaccttccagcgagccggcaaattttgatgttc 1055 Query: 185 tctgcaacattcccggtcactgtcaaggctttcaaggacaaatatctgcctaaaccctat 244 || ||||| ||||| || ||||| |||| |||||||||||||| ||||||||||| ||| Sbjct: 1056 tcggcaacgttccctgtgactgtgaaggagttcaaggacaaatacctgcctaaaccttat 1115 Query: 245 gttattaatcttatggacgaacttacattgaagggaattacccagttctacgcttttgtt 304 |||||||| |||||||| ||||||||| ||||||||||||| ||||| || |||||||| Sbjct: 1116 gttattaaccttatggatgaacttacactgaagggaattacacagttttatgcttttgta 1175 Query: 305 gaagaaaggcagaaagtccattgtctgaacactcttttttccaagctgcaaattaatcaa 364 ||||||||||||||||| ||||| || |||||||| ||||||||||| ||||| || ||| Sbjct: 1176 gaagaaaggcagaaagttcattgccttaacactctcttttccaagcttcaaatcaaccaa 1235 Query: 365 tctataatattctgtaactccgtaaatcgtgttgaactactggcgaagaagatcacagag 424 || ||||| ||||| ||||| |||||||||||||| || ||||| ||||||||||| ||| Sbjct: 1236 tcaataatcttctgcaactctgtaaatcgtgttgagcttctggcaaagaagatcacggag 1295 Query: 425 cttggttactcttgcttctacatccatgctaaaatgctgcaggatcatcgtaatagagta 484 ||||||||||||||||||||||||||||| || |||||||| || |||||||||||||| Sbjct: 1296 cttggttactcttgcttctacatccatgcaaagatgctgcaagaccatcgtaatagagtt 1355 Query: 485 ttccatgatttccgtaatggcgcatgcaggaaccttgtgtgtacagatctttttacaagg 544 |||||||||||||||||||| |||||||||||||| || |||||||||||||| |||||| Sbjct: 1356 ttccatgatttccgtaatggggcatgcaggaacctggtttgtacagatcttttcacaagg 1415 Query: 545 ggaatagatattcaagctgtt 565 ||||| || |||||||||||| Sbjct: 1416 ggaattgacattcaagctgtt 1436
>ref|XM_466992.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2433 Score = 573 bits (289), Expect = e-160 Identities = 493/561 (87%) Strand = Plus / Plus Query: 5 catttaattgtggggacgcctggtcgagttttggaccttacaaagaaaggcatttgcatt 64 |||||| |||| || |||||||| || |||||||||||||||||||||| || |||||| Sbjct: 979 catttacttgttggaacgcctgggcgtattttggaccttacaaagaaaggtatctgcatt 1038 Query: 65 ctgaaggactgttcaatgcttattatggatgaggcagacaagcttctttctcccgagttc 124 |||||||||| || |||||||| ||||||||||||||||||||||| ||||| |||||| Sbjct: 1039 ttgaaggactgctctatgcttatcatggatgaggcagacaagcttctctctcctgagttc 1098 Query: 125 caaccttctgtggagcagttaattcgataccttccatcgagtcgacagattctaatgttc 184 || ||||| ||||| ||| | ||||| ||||||||| |||| || || ||| | |||||| Sbjct: 1099 cagccttccgtggaacagctgattcgttaccttccagcgagccggcaaattttgatgttc 1158 Query: 185 tctgcaacattcccggtcactgtcaaggctttcaaggacaaatatctgcctaaaccctat 244 || ||||| ||||| || ||||| |||| |||||||||||||| ||||||||||| ||| Sbjct: 1159 tcggcaacgttccctgtgactgtgaaggagttcaaggacaaatacctgcctaaaccttat 1218 Query: 245 gttattaatcttatggacgaacttacattgaagggaattacccagttctacgcttttgtt 304 |||||||| |||||||| ||||||||| ||||||||||||| ||||| || |||||||| Sbjct: 1219 gttattaaccttatggatgaacttacactgaagggaattacacagttttatgcttttgta 1278 Query: 305 gaagaaaggcagaaagtccattgtctgaacactcttttttccaagctgcaaattaatcaa 364 ||||||||||||||||| ||||| || |||||||| ||||||||||| ||||| || ||| Sbjct: 1279 gaagaaaggcagaaagttcattgccttaacactctcttttccaagcttcaaatcaaccaa 1338 Query: 365 tctataatattctgtaactccgtaaatcgtgttgaactactggcgaagaagatcacagag 424 || ||||| ||||| ||||| |||||||||||||| || ||||| ||||||||||| ||| Sbjct: 1339 tcaataatcttctgcaactctgtaaatcgtgttgagcttctggcaaagaagatcacggag 1398 Query: 425 cttggttactcttgcttctacatccatgctaaaatgctgcaggatcatcgtaatagagta 484 ||||||||||||||||||||||||||||| || |||||||| || |||||||||||||| Sbjct: 1399 cttggttactcttgcttctacatccatgcaaagatgctgcaagaccatcgtaatagagtt 1458 Query: 485 ttccatgatttccgtaatggcgcatgcaggaaccttgtgtgtacagatctttttacaagg 544 |||||||||||||||||||| |||||||||||||| || |||||||||||||| |||||| Sbjct: 1459 ttccatgatttccgtaatggggcatgcaggaacctggtttgtacagatcttttcacaagg 1518 Query: 545 ggaatagatattcaagctgtt 565 ||||| || |||||||||||| Sbjct: 1519 ggaattgacattcaagctgtt 1539
>dbj|AK072124.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013124F19, full insert sequence Length = 2325 Score = 573 bits (289), Expect = e-160 Identities = 493/561 (87%) Strand = Plus / Plus Query: 5 catttaattgtggggacgcctggtcgagttttggaccttacaaagaaaggcatttgcatt 64 |||||| |||| || |||||||| || |||||||||||||||||||||| || |||||| Sbjct: 876 catttacttgttggaacgcctgggcgtattttggaccttacaaagaaaggtatctgcatt 935 Query: 65 ctgaaggactgttcaatgcttattatggatgaggcagacaagcttctttctcccgagttc 124 |||||||||| || |||||||| ||||||||||||||||||||||| ||||| |||||| Sbjct: 936 ttgaaggactgctctatgcttatcatggatgaggcagacaagcttctctctcctgagttc 995 Query: 125 caaccttctgtggagcagttaattcgataccttccatcgagtcgacagattctaatgttc 184 || ||||| ||||| ||| | ||||| ||||||||| |||| || || ||| | |||||| Sbjct: 996 cagccttccgtggaacagctgattcgttaccttccagcgagccggcaaattttgatgttc 1055 Query: 185 tctgcaacattcccggtcactgtcaaggctttcaaggacaaatatctgcctaaaccctat 244 || ||||| ||||| || ||||| |||| |||||||||||||| ||||||||||| ||| Sbjct: 1056 tcggcaacgttccctgtgactgtgaaggagttcaaggacaaatacctgcctaaaccttat 1115 Query: 245 gttattaatcttatggacgaacttacattgaagggaattacccagttctacgcttttgtt 304 |||||||| |||||||| ||||||||| ||||||||||||| ||||| || |||||||| Sbjct: 1116 gttattaaccttatggatgaacttacactgaagggaattacacagttttatgcttttgta 1175 Query: 305 gaagaaaggcagaaagtccattgtctgaacactcttttttccaagctgcaaattaatcaa 364 ||||||||||||||||| ||||| || |||||||| ||||||||||| ||||| || ||| Sbjct: 1176 gaagaaaggcagaaagttcattgccttaacactctcttttccaagcttcaaatcaaccaa 1235 Query: 365 tctataatattctgtaactccgtaaatcgtgttgaactactggcgaagaagatcacagag 424 || ||||| ||||| ||||| |||||||||||||| || ||||| ||||||||||| ||| Sbjct: 1236 tcaataatcttctgcaactctgtaaatcgtgttgagcttctggcaaagaagatcacggag 1295 Query: 425 cttggttactcttgcttctacatccatgctaaaatgctgcaggatcatcgtaatagagta 484 ||||||||||||||||||||||||||||| || |||||||| || |||||||||||||| Sbjct: 1296 cttggttactcttgcttctacatccatgcaaagatgctgcaagaccatcgtaatagagtt 1355 Query: 485 ttccatgatttccgtaatggcgcatgcaggaaccttgtgtgtacagatctttttacaagg 544 |||||||||||||||||||| |||||||||||||| || |||||||||||||| |||||| Sbjct: 1356 ttccatgatttccgtaatggggcatgcaggaacctggtttgtacagatcttttcacaagg 1415 Query: 545 ggaatagatattcaagctgtt 565 ||||| || |||||||||||| Sbjct: 1416 ggaattgacattcaagctgtt 1436
>dbj|AK066504.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013073G20, full insert sequence Length = 2433 Score = 573 bits (289), Expect = e-160 Identities = 493/561 (87%) Strand = Plus / Plus Query: 5 catttaattgtggggacgcctggtcgagttttggaccttacaaagaaaggcatttgcatt 64 |||||| |||| || |||||||| || |||||||||||||||||||||| || |||||| Sbjct: 979 catttacttgttggaacgcctgggcgtattttggaccttacaaagaaaggtatctgcatt 1038 Query: 65 ctgaaggactgttcaatgcttattatggatgaggcagacaagcttctttctcccgagttc 124 |||||||||| || |||||||| ||||||||||||||||||||||| ||||| |||||| Sbjct: 1039 ttgaaggactgctctatgcttatcatggatgaggcagacaagcttctctctcctgagttc 1098 Query: 125 caaccttctgtggagcagttaattcgataccttccatcgagtcgacagattctaatgttc 184 || ||||| ||||| ||| | ||||| ||||||||| |||| || || ||| | |||||| Sbjct: 1099 cagccttccgtggaacagctgattcgttaccttccagcgagccggcaaattttgatgttc 1158 Query: 185 tctgcaacattcccggtcactgtcaaggctttcaaggacaaatatctgcctaaaccctat 244 || ||||| ||||| || ||||| |||| |||||||||||||| ||||||||||| ||| Sbjct: 1159 tcggcaacgttccctgtgactgtgaaggagttcaaggacaaatacctgcctaaaccttat 1218 Query: 245 gttattaatcttatggacgaacttacattgaagggaattacccagttctacgcttttgtt 304 |||||||| |||||||| ||||||||| ||||||||||||| ||||| || |||||||| Sbjct: 1219 gttattaaccttatggatgaacttacactgaagggaattacacagttttatgcttttgta 1278 Query: 305 gaagaaaggcagaaagtccattgtctgaacactcttttttccaagctgcaaattaatcaa 364 ||||||||||||||||| ||||| || |||||||| ||||||||||| ||||| || ||| Sbjct: 1279 gaagaaaggcagaaagttcattgccttaacactctcttttccaagcttcaaatcaaccaa 1338 Query: 365 tctataatattctgtaactccgtaaatcgtgttgaactactggcgaagaagatcacagag 424 || ||||| ||||| ||||| |||||||||||||| || ||||| ||||||||||| ||| Sbjct: 1339 tcaataatcttctgcaactctgtaaatcgtgttgagcttctggcaaagaagatcacggag 1398 Query: 425 cttggttactcttgcttctacatccatgctaaaatgctgcaggatcatcgtaatagagta 484 ||||||||||||||||||||||||||||| || |||||||| || |||||||||||||| Sbjct: 1399 cttggttactcttgcttctacatccatgcaaagatgctgcaagaccatcgtaatagagtt 1458 Query: 485 ttccatgatttccgtaatggcgcatgcaggaaccttgtgtgtacagatctttttacaagg 544 |||||||||||||||||||| |||||||||||||| || |||||||||||||| |||||| Sbjct: 1459 ttccatgatttccgtaatggggcatgcaggaacctggtttgtacagatcttttcacaagg 1518 Query: 545 ggaatagatattcaagctgtt 565 ||||| || |||||||||||| Sbjct: 1519 ggaattgacattcaagctgtt 1539
>gb|AY108539.1| Zea mays PCO101054 mRNA sequence Length = 1061 Score = 404 bits (204), Expect = e-109 Identities = 312/348 (89%) Strand = Plus / Plus Query: 217 caaggacaaatatctgcctaaaccctatgttattaatcttatggacgaacttacattgaa 276 ||||||||||||||| |||||||| ||||| ||||| |||||||| ||||||||| |||| Sbjct: 7 caaggacaaatatcttcctaaaccttatgtgattaaccttatggatgaacttacactgaa 66 Query: 277 gggaattacccagttctacgcttttgttgaagaaaggcagaaagtccattgtctgaacac 336 ||||||||| |||||||| ||||||||||||||| | |||||||| || ||||| ||||| Sbjct: 67 gggaattacacagttctatgcttttgttgaagaacgacagaaagttcactgtctcaacac 126 Query: 337 tcttttttccaagctgcaaattaatcaatctataatattctgtaactccgtaaatcgtgt 396 || ||||||||||| ||||| ||||| || ||||||||||||||||| ||||||||||| Sbjct: 127 cctcttttccaagcttcaaatcaatcagtcaataatattctgtaactctgtaaatcgtgt 186 Query: 397 tgaactactggcgaagaagatcacagagcttggttactcttgcttctacatccatgctaa 456 ||||||| |||||||||||||||||||||||||||| ||||||||||| || ||||| || Sbjct: 187 tgaactattggcgaagaagatcacagagcttggttattcttgcttctatattcatgcaaa 246 Query: 457 aatgctgcaggatcatcgtaatagagtattccatgatttccgtaatggcgcatgcaggaa 516 ||||| ||||| || || |||||||| |||||||||||||||||||| || |||||||| Sbjct: 247 gatgctacaggaccaccgcaatagagttttccatgatttccgtaatggagcgtgcaggaa 306 Query: 517 ccttgtgtgtacagatctttttacaaggggaatagatattcaagctgt 564 ||||| ||||| ||||||||||||||||||||||||||||||||||| Sbjct: 307 tcttgtttgtactgatctttttacaaggggaatagatattcaagctgt 354
>gb|BT018551.1| Zea mays clone EL01N0438H11.d mRNA sequence Length = 1188 Score = 289 bits (146), Expect = 5e-75 Identities = 224/250 (89%) Strand = Plus / Plus Query: 315 agaaagtccattgtctgaacactcttttttccaagctgcaaattaatcaatctataatat 374 ||||||| || ||||| ||||| || ||||||||||| ||||| ||||| || ||||||| Sbjct: 9 agaaagttcactgtctcaacaccctcttttccaagcttcaaatcaatcagtcaataatat 68 Query: 375 tctgtaactccgtaaatcgtgttgaactactggcgaagaagatcacagagcttggttact 434 |||||||||| |||||||||||||||||| |||||||||||||||||||||||||||| | Sbjct: 69 tctgtaactctgtaaatcgtgttgaactattggcgaagaagatcacagagcttggttatt 128 Query: 435 cttgcttctacatccatgctaaaatgctgcaggatcatcgtaatagagtattccatgatt 494 |||||||||| || ||||| || ||||| ||||| || || |||||||| |||||||||| Sbjct: 129 cttgcttctatattcatgcaaagatgctacaggaccaccgcaatagagttttccatgatt 188 Query: 495 tccgtaatggcgcatgcaggaaccttgtgtgtacagatctttttacaaggggaatagata 554 |||||||||| || |||||||| ||||| ||||| ||||||||||||||||||||||||| Sbjct: 189 tccgtaatggagcgtgcaggaatcttgtttgtactgatctttttacaaggggaatagata 248 Query: 555 ttcaagctgt 564 |||||||||| Sbjct: 249 ttcaagctgt 258
>emb|AL663006.3|OSJN00204 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0039L24, complete sequence Length = 121056 Score = 266 bits (134), Expect = 7e-68 Identities = 224/254 (88%) Strand = Plus / Plus Query: 96 aggcagacaagcttctttctcccgagttccaaccttctgtggagcagttaattcgatacc 155 |||||||||||||||||||||| ||||||||||| ||| | || | || ||||| || | Sbjct: 60049 aggcagacaagcttctttctcctgagttccaaccgtctattcaggaattgattcggtatc 60108 Query: 156 ttccatcgagtcgacagattctaatgttctctgcaacattcccggtcactgtcaaggctt 215 ||||||||| ||| || ||| | |||||||||||||||||||| || |||||||||| | Sbjct: 60109 ttccatcgaatcggcaaattttgatgttctctgcaacattccctgtgactgtcaaggagt 60168 Query: 216 tcaaggacaaatatctgcctaaaccctatgttattaatcttatggacgaacttacattga 275 |||||||||||||||| |||||||||||||| ||||| |||||||| ||||||||||||| Sbjct: 60169 tcaaggacaaatatctccctaaaccctatgtcattaaccttatggatgaacttacattga 60228 Query: 276 agggaattacccagttctacgcttttgttgaagaaaggcagaaagtccattgtctgaaca 335 |||||||||| ||||| || |||||||||||||| |||||||||||||| ||||| || | Sbjct: 60229 agggaattacacagttttatgcttttgttgaagagaggcagaaagtccactgtcttaata 60288 Query: 336 ctcttttttccaag 349 |||||||||||||| Sbjct: 60289 ctcttttttccaag 60302 Score = 212 bits (107), Expect = 9e-52 Identities = 164/183 (89%) Strand = Plus / Plus Query: 348 agctgcaaattaatcaatctataatattctgtaactccgtaaatcgtgttgaactactgg 407 ||||||||||||||||||| ||||||||||||||||| |||||||||||||||||| ||| Sbjct: 60400 agctgcaaattaatcaatcgataatattctgtaactcggtaaatcgtgttgaactattgg 60459 Query: 408 cgaagaagatcacagagcttggttactcttgcttctacatccatgctaaaatgctgcagg 467 | ||||||||||||||||||||||| ||||||||||| ||||||||||||||| |||| | Sbjct: 60460 caaagaagatcacagagcttggttattcttgcttctatatccatgctaaaatgttgcaag 60519 Query: 468 atcatcgtaatagagtattccatgatttccgtaatggcgcatgcaggaaccttgtgtgta 527 | ||||| || || || ||||||||||| || ||||| |||||||||||| | || |||| Sbjct: 60520 accatcggaacagggttttccatgattttcgcaatggtgcatgcaggaacttggtttgta 60579 Query: 528 cag 530 ||| Sbjct: 60580 cag 60582 Score = 75.8 bits (38), Expect = 1e-10 Identities = 80/94 (85%) Strand = Plus / Plus Query: 5 catttaattgtggggacgcctggtcgagttttggaccttacaaagaaaggcatttgcatt 64 |||||| |||| || || |||||||| |||| ||||||||||||||||| | ||| | Sbjct: 59662 catttacttgttggaactcctggtcgcattttagaccttacaaagaaaggtgtctgcgtc 59721 Query: 65 ctgaaggactgttcaatgcttattatggatgagg 98 |||||| |||||||||||||| |||||||||||| Sbjct: 59722 ctgaagaactgttcaatgcttgttatggatgagg 59755 Score = 67.9 bits (34), Expect = 3e-08 Identities = 37/38 (97%) Strand = Plus / Plus Query: 528 cagatctttttacaaggggaatagatattcaagctgtt 565 |||||||||||||||||||||||||||| ||||||||| Sbjct: 61365 cagatctttttacaaggggaatagatatccaagctgtt 61402
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 266 bits (134), Expect = 7e-68 Identities = 224/254 (88%) Strand = Plus / Plus Query: 96 aggcagacaagcttctttctcccgagttccaaccttctgtggagcagttaattcgatacc 155 |||||||||||||||||||||| ||||||||||| ||| | || | || ||||| || | Sbjct: 26620491 aggcagacaagcttctttctcctgagttccaaccgtctattcaggaattgattcggtatc 26620550 Query: 156 ttccatcgagtcgacagattctaatgttctctgcaacattcccggtcactgtcaaggctt 215 ||||||||| ||| || ||| | |||||||||||||||||||| || |||||||||| | Sbjct: 26620551 ttccatcgaatcggcaaattttgatgttctctgcaacattccctgtgactgtcaaggagt 26620610 Query: 216 tcaaggacaaatatctgcctaaaccctatgttattaatcttatggacgaacttacattga 275 |||||||||||||||| |||||||||||||| ||||| |||||||| ||||||||||||| Sbjct: 26620611 tcaaggacaaatatctccctaaaccctatgtcattaaccttatggatgaacttacattga 26620670 Query: 276 agggaattacccagttctacgcttttgttgaagaaaggcagaaagtccattgtctgaaca 335 |||||||||| ||||| || |||||||||||||| |||||||||||||| ||||| || | Sbjct: 26620671 agggaattacacagttttatgcttttgttgaagagaggcagaaagtccactgtcttaata 26620730 Query: 336 ctcttttttccaag 349 |||||||||||||| Sbjct: 26620731 ctcttttttccaag 26620744 Score = 212 bits (107), Expect = 9e-52 Identities = 164/183 (89%) Strand = Plus / Plus Query: 348 agctgcaaattaatcaatctataatattctgtaactccgtaaatcgtgttgaactactgg 407 ||||||||||||||||||| ||||||||||||||||| |||||||||||||||||| ||| Sbjct: 26620842 agctgcaaattaatcaatcgataatattctgtaactcggtaaatcgtgttgaactattgg 26620901 Query: 408 cgaagaagatcacagagcttggttactcttgcttctacatccatgctaaaatgctgcagg 467 | ||||||||||||||||||||||| ||||||||||| ||||||||||||||| |||| | Sbjct: 26620902 caaagaagatcacagagcttggttattcttgcttctatatccatgctaaaatgttgcaag 26620961 Query: 468 atcatcgtaatagagtattccatgatttccgtaatggcgcatgcaggaaccttgtgtgta 527 | ||||| || || || ||||||||||| || ||||| |||||||||||| | || |||| Sbjct: 26620962 accatcggaacagggttttccatgattttcgcaatggtgcatgcaggaacttggtttgta 26621021 Query: 528 cag 530 ||| Sbjct: 26621022 cag 26621024 Score = 75.8 bits (38), Expect = 1e-10 Identities = 80/94 (85%) Strand = Plus / Plus Query: 5 catttaattgtggggacgcctggtcgagttttggaccttacaaagaaaggcatttgcatt 64 |||||| |||| || || |||||||| |||| ||||||||||||||||| | ||| | Sbjct: 26620104 catttacttgttggaactcctggtcgcattttagaccttacaaagaaaggtgtctgcgtc 26620163 Query: 65 ctgaaggactgttcaatgcttattatggatgagg 98 |||||| |||||||||||||| |||||||||||| Sbjct: 26620164 ctgaagaactgttcaatgcttgttatggatgagg 26620197 Score = 67.9 bits (34), Expect = 3e-08 Identities = 37/38 (97%) Strand = Plus / Plus Query: 528 cagatctttttacaaggggaatagatattcaagctgtt 565 |||||||||||||||||||||||||||| ||||||||| Sbjct: 26621807 cagatctttttacaaggggaatagatatccaagctgtt 26621844
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 234 bits (118), Expect = 3e-58 Identities = 220/254 (86%) Strand = Plus / Plus Query: 96 aggcagacaagcttctttctcccgagttccaaccttctgtggagcagttaattcgatacc 155 |||||||||||||||| ||||| |||||||| ||||| ||||| ||| | ||||| |||| Sbjct: 25789698 aggcagacaagcttctctctcctgagttccagccttccgtggaacagctgattcgttacc 25789757 Query: 156 ttccatcgagtcgacagattctaatgttctctgcaacattcccggtcactgtcaaggctt 215 ||||| |||| || || ||| | |||||||| ||||| ||||| || ||||| |||| | Sbjct: 25789758 ttccagcgagccggcaaattttgatgttctcggcaacgttccctgtgactgtgaaggagt 25789817 Query: 216 tcaaggacaaatatctgcctaaaccctatgttattaatcttatggacgaacttacattga 275 ||||||||||||| ||||||||||| ||||||||||| |||||||| ||||||||| ||| Sbjct: 25789818 tcaaggacaaatacctgcctaaaccttatgttattaaccttatggatgaacttacactga 25789877 Query: 276 agggaattacccagttctacgcttttgttgaagaaaggcagaaagtccattgtctgaaca 335 |||||||||| ||||| || |||||||| ||||||||||||||||| ||||| || |||| Sbjct: 25789878 agggaattacacagttttatgcttttgtagaagaaaggcagaaagttcattgccttaaca 25789937 Query: 336 ctcttttttccaag 349 |||| ||||||||| Sbjct: 25789938 ctctcttttccaag 25789951 Score = 212 bits (107), Expect = 9e-52 Identities = 164/183 (89%) Strand = Plus / Plus Query: 348 agctgcaaattaatcaatctataatattctgtaactccgtaaatcgtgttgaactactgg 407 |||| ||||| || ||||| ||||| ||||| ||||| |||||||||||||| || |||| Sbjct: 25790041 agcttcaaatcaaccaatcaataatcttctgcaactctgtaaatcgtgttgagcttctgg 25790100 Query: 408 cgaagaagatcacagagcttggttactcttgcttctacatccatgctaaaatgctgcagg 467 | ||||||||||| |||||||||||||||||||||||||||||||| || |||||||| | Sbjct: 25790101 caaagaagatcacggagcttggttactcttgcttctacatccatgcaaagatgctgcaag 25790160 Query: 468 atcatcgtaatagagtattccatgatttccgtaatggcgcatgcaggaaccttgtgtgta 527 | |||||||||||||| |||||||||||||||||||| |||||||||||||| || |||| Sbjct: 25790161 accatcgtaatagagttttccatgatttccgtaatggggcatgcaggaacctggtttgta 25790220 Query: 528 cag 530 ||| Sbjct: 25790221 cag 25790223 Score = 91.7 bits (46), Expect = 2e-15 Identities = 82/94 (87%) Strand = Plus / Plus Query: 5 catttaattgtggggacgcctggtcgagttttggaccttacaaagaaaggcatttgcatt 64 |||||| |||| || |||||||| || |||||||||||||||||||||| || |||||| Sbjct: 25788438 catttacttgttggaacgcctgggcgtattttggaccttacaaagaaaggtatctgcatt 25788497 Query: 65 ctgaaggactgttcaatgcttattatggatgagg 98 |||||||||| || |||||||| |||||||||| Sbjct: 25788498 ttgaaggactgctctatgcttatcatggatgagg 25788531 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 528 cagatctttttacaaggggaatagatattcaagctgtt 565 |||||||||| ||||||||||| || |||||||||||| Sbjct: 25790861 cagatcttttcacaaggggaattgacattcaagctgtt 25790898
>dbj|AP004133.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1112_G03 Length = 106401 Score = 234 bits (118), Expect = 3e-58 Identities = 220/254 (86%) Strand = Plus / Plus Query: 96 aggcagacaagcttctttctcccgagttccaaccttctgtggagcagttaattcgatacc 155 |||||||||||||||| ||||| |||||||| ||||| ||||| ||| | ||||| |||| Sbjct: 36304 aggcagacaagcttctctctcctgagttccagccttccgtggaacagctgattcgttacc 36363 Query: 156 ttccatcgagtcgacagattctaatgttctctgcaacattcccggtcactgtcaaggctt 215 ||||| |||| || || ||| | |||||||| ||||| ||||| || ||||| |||| | Sbjct: 36364 ttccagcgagccggcaaattttgatgttctcggcaacgttccctgtgactgtgaaggagt 36423 Query: 216 tcaaggacaaatatctgcctaaaccctatgttattaatcttatggacgaacttacattga 275 ||||||||||||| ||||||||||| ||||||||||| |||||||| ||||||||| ||| Sbjct: 36424 tcaaggacaaatacctgcctaaaccttatgttattaaccttatggatgaacttacactga 36483 Query: 276 agggaattacccagttctacgcttttgttgaagaaaggcagaaagtccattgtctgaaca 335 |||||||||| ||||| || |||||||| ||||||||||||||||| ||||| || |||| Sbjct: 36484 agggaattacacagttttatgcttttgtagaagaaaggcagaaagttcattgccttaaca 36543 Query: 336 ctcttttttccaag 349 |||| ||||||||| Sbjct: 36544 ctctcttttccaag 36557 Score = 212 bits (107), Expect = 9e-52 Identities = 164/183 (89%) Strand = Plus / Plus Query: 348 agctgcaaattaatcaatctataatattctgtaactccgtaaatcgtgttgaactactgg 407 |||| ||||| || ||||| ||||| ||||| ||||| |||||||||||||| || |||| Sbjct: 36647 agcttcaaatcaaccaatcaataatcttctgcaactctgtaaatcgtgttgagcttctgg 36706 Query: 408 cgaagaagatcacagagcttggttactcttgcttctacatccatgctaaaatgctgcagg 467 | ||||||||||| |||||||||||||||||||||||||||||||| || |||||||| | Sbjct: 36707 caaagaagatcacggagcttggttactcttgcttctacatccatgcaaagatgctgcaag 36766 Query: 468 atcatcgtaatagagtattccatgatttccgtaatggcgcatgcaggaaccttgtgtgta 527 | |||||||||||||| |||||||||||||||||||| |||||||||||||| || |||| Sbjct: 36767 accatcgtaatagagttttccatgatttccgtaatggggcatgcaggaacctggtttgta 36826 Query: 528 cag 530 ||| Sbjct: 36827 cag 36829 Score = 91.7 bits (46), Expect = 2e-15 Identities = 82/94 (87%) Strand = Plus / Plus Query: 5 catttaattgtggggacgcctggtcgagttttggaccttacaaagaaaggcatttgcatt 64 |||||| |||| || |||||||| || |||||||||||||||||||||| || |||||| Sbjct: 35044 catttacttgttggaacgcctgggcgtattttggaccttacaaagaaaggtatctgcatt 35103 Query: 65 ctgaaggactgttcaatgcttattatggatgagg 98 |||||||||| || |||||||| |||||||||| Sbjct: 35104 ttgaaggactgctctatgcttatcatggatgagg 35137 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 528 cagatctttttacaaggggaatagatattcaagctgtt 565 |||||||||| ||||||||||| || |||||||||||| Sbjct: 37467 cagatcttttcacaaggggaattgacattcaagctgtt 37504
>ref|NM_197231.1| Oryza sativa (japonica cultivar-group) putative RNA helicase (OSJNBb0073N24.12), mRNA Length = 2063 Score = 190 bits (96), Expect = 3e-45 Identities = 291/356 (81%) Strand = Plus / Plus Query: 209 aaggctttcaaggacaaatatctgcctaaaccctatgttattaatcttatggacgaactt 268 |||| |||||| || ||||| || |||| || |||||||||||||| ||||| ||||| Sbjct: 1003 aaggatttcaaagagaaatacctacctaggccttatgttattaatctcatggatgaacta 1062 Query: 269 acattgaagggaattacccagttctacgcttttgttgaagaaaggcagaaagtccattgt 328 ||| | ||||||||||| || | ||| ||||| || |||||||| |||||||| || ||| Sbjct: 1063 acactaaagggaattacacaatactatgctttcgtggaagaaagacagaaagttcactgt 1122 Query: 329 ctgaacactcttttttccaagctgcaaattaatcaatctataatattctgtaactccgta 388 ||||| || ||||| || ||||| ||||| || || || || |||||||||||||| || Sbjct: 1123 ctgaatacacttttctcgaagcttcaaataaaccagtccattatattctgtaactctgtt 1182 Query: 389 aatcgtgttgaactactggcgaagaagatcacagagcttggttactcttgcttctacatc 448 || | ||||| |||||||| ||||| ||||| |||||||| || || ||||||||||| Sbjct: 1183 aacagagttgagctactggctaagaaaatcaccgagcttggctattcatgcttctacatt 1242 Query: 449 catgctaaaatgctgcaggatcatcgtaatagagtattccatgatttccgtaatggcgca 508 ||||| |||||| |||| || ||||| || |||| || |||||||| || ||||| || Sbjct: 1243 catgcaaaaatgttgcaagaccatcgaaaccgagtgtttcatgattttcgcaatggtgct 1302 Query: 509 tgcaggaaccttgtgtgtacagatctttttacaaggggaatagatattcaagctgt 564 ||||| ||||||||||| |||||||| |||||||| ||||| || || |||||||| Sbjct: 1303 tgcagaaaccttgtgtgcacagatctgtttacaagaggaattgacatccaagctgt 1358 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Plus Query: 65 ctgaaggactgttcaatgcttattatggatgaggcagacaa 105 |||||||| ||||||||||| | ||||||||||||||||| Sbjct: 859 ctgaaggattgttcaatgctcgtaatggatgaggcagacaa 899
>dbj|AK101354.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033034P16, full insert sequence Length = 1236 Score = 190 bits (96), Expect = 3e-45 Identities = 291/356 (81%) Strand = Plus / Plus Query: 209 aaggctttcaaggacaaatatctgcctaaaccctatgttattaatcttatggacgaactt 268 |||| |||||| || ||||| || |||| || |||||||||||||| ||||| ||||| Sbjct: 176 aaggatttcaaagagaaatacctacctaggccttatgttattaatctcatggatgaacta 235 Query: 269 acattgaagggaattacccagttctacgcttttgttgaagaaaggcagaaagtccattgt 328 ||| | ||||||||||| || | ||| ||||| || |||||||| |||||||| || ||| Sbjct: 236 acactaaagggaattacacaatactatgctttcgtggaagaaagacagaaagttcactgt 295 Query: 329 ctgaacactcttttttccaagctgcaaattaatcaatctataatattctgtaactccgta 388 ||||| || ||||| || ||||| ||||| || || || || |||||||||||||| || Sbjct: 296 ctgaatacacttttctcgaagcttcaaataaaccagtccattatattctgtaactctgtt 355 Query: 389 aatcgtgttgaactactggcgaagaagatcacagagcttggttactcttgcttctacatc 448 || | ||||| |||||||| ||||| ||||| |||||||| || || ||||||||||| Sbjct: 356 aacagagttgagctactggctaagaaaatcaccgagcttggctattcatgcttctacatt 415 Query: 449 catgctaaaatgctgcaggatcatcgtaatagagtattccatgatttccgtaatggcgca 508 ||||| |||||| |||| || ||||| || |||| || |||||||| || ||||| || Sbjct: 416 catgcaaaaatgttgcaagaccatcgaaaccgagtgtttcatgattttcgcaatggtgct 475 Query: 509 tgcaggaaccttgtgtgtacagatctttttacaaggggaatagatattcaagctgt 564 ||||| ||||||||||| |||||||| |||||||| ||||| || || |||||||| Sbjct: 476 tgcagaaaccttgtgtgcacagatctgtttacaagaggaattgacatccaagctgt 531 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Plus Query: 65 ctgaaggactgttcaatgcttattatggatgaggcagacaa 105 |||||||| ||||||||||| | ||||||||||||||||| Sbjct: 32 ctgaaggattgttcaatgctcgtaatggatgaggcagacaa 72
>dbj|AK073085.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033023C03, full insert sequence Length = 2181 Score = 190 bits (96), Expect = 3e-45 Identities = 291/356 (81%) Strand = Plus / Plus Query: 209 aaggctttcaaggacaaatatctgcctaaaccctatgttattaatcttatggacgaactt 268 |||| |||||| || ||||| || |||| || |||||||||||||| ||||| ||||| Sbjct: 1157 aaggatttcaaagagaaatacctacctaggccttatgttattaatctcatggatgaacta 1216 Query: 269 acattgaagggaattacccagttctacgcttttgttgaagaaaggcagaaagtccattgt 328 ||| | ||||||||||| || | ||| ||||| || |||||||| |||||||| || ||| Sbjct: 1217 acactaaagggaattacacaatactatgctttcgtggaagaaagacagaaagttcactgt 1276 Query: 329 ctgaacactcttttttccaagctgcaaattaatcaatctataatattctgtaactccgta 388 ||||| || ||||| || ||||| ||||| || || || || |||||||||||||| || Sbjct: 1277 ctgaatacacttttctcgaagcttcaaataaaccagtccattatattctgtaactctgtt 1336 Query: 389 aatcgtgttgaactactggcgaagaagatcacagagcttggttactcttgcttctacatc 448 || | ||||| |||||||| ||||| ||||| |||||||| || || ||||||||||| Sbjct: 1337 aacagagttgagctactggctaagaaaatcaccgagcttggctattcatgcttctacatt 1396 Query: 449 catgctaaaatgctgcaggatcatcgtaatagagtattccatgatttccgtaatggcgca 508 ||||| |||||| |||| || ||||| || |||| || |||||||| || ||||| || Sbjct: 1397 catgcaaaaatgttgcaagaccatcgaaaccgagtgtttcatgattttcgcaatggtgct 1456 Query: 509 tgcaggaaccttgtgtgtacagatctttttacaaggggaatagatattcaagctgt 564 ||||| ||||||||||| |||||||| |||||||| ||||| || || |||||||| Sbjct: 1457 tgcagaaaccttgtgtgcacagatctgtttacaagaggaattgacatccaagctgt 1512 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Plus Query: 65 ctgaaggactgttcaatgcttattatggatgaggcagacaa 105 |||||||| ||||||||||| | ||||||||||||||||| Sbjct: 1013 ctgaaggattgttcaatgctcgtaatggatgaggcagacaa 1053
>ref|NM_116291.3| Arabidopsis thaliana ATP binding / ATP-dependent helicase/ helicase/ nucleic acid binding AT4G00660 transcript variant AT4G00660.2 mRNA, complete cds Length = 2744 Score = 182 bits (92), Expect = 8e-43 Identities = 359/448 (80%) Strand = Plus / Plus Query: 81 tgcttattatggatgaggcagacaagcttctttctcccgagttccaaccttctgtggagc 140 ||||| ||||||||||||| ||||||||| | |||| |||||||||||||| ||||| | Sbjct: 1208 tgcttgttatggatgaggctgacaagcttttgtctcaagagttccaaccttcagtggaac 1267 Query: 141 agttaattcgataccttccatcgagtcgacagattctaatgttctctgcaacattcccgg 200 | || ||| | | |||||| ||||| |||||| | |||||||| || || ||||| | Sbjct: 1268 atttgattagctttcttccagaaagtcgtcagattttgatgttctcagccaccttccctg 1327 Query: 201 tcactgtcaaggctttcaaggacaaatatctgcctaaaccctatgttattaatcttatgg 260 |||||||||||| ||| ||||| | | |||| | || || || || || ||||| |||| Sbjct: 1328 tcactgtcaaggattttaaggataggtttctgacgaatccttacgtcatcaatctcatgg 1387 Query: 261 acgaacttacattgaagggaattacccagttctacgcttttgttgaagaaaggcagaaag 320 | |||||||| | ||||| |||||||| ||||| ||||| ||||||||||| |||||| Sbjct: 1388 atgaacttacgctcaagggtattacccaattctatgctttcgttgaagaaagacagaaaa 1447 Query: 321 tccattgtctgaacactcttttttccaagctgcaaattaatcaatctataatattctgta 380 | ||||| |||| || || || ||||||||||||||||| ||||| || |||||||| | Sbjct: 1448 ttcattgcttgaatacactattctccaagctgcaaattaaccaatcaatcatattctgca 1507 Query: 381 actccgtaaatcgtgttgaactactggcgaagaagatcacagagcttggttactcttgct 440 | || ||||||||||| || || | || ||||| |||||||| ||||| || || |||| Sbjct: 1508 attctgtaaatcgtgtggagctcttagccaagaaaatcacagaacttgggtattcatgct 1567 Query: 441 tctacatccatgctaaaatgctgcaggatcatcgtaatagagtattccatgatttccgta 500 | ||||||||||| || ||||| || || || || || ||||| |||||||| ||||| | Sbjct: 1568 tttacatccatgcaaagatgcttcaagaccaccgaaacagagtgttccatgacttccgga 1627 Query: 501 atggcgcatgcaggaaccttgtgtgtac 528 |||| |||||| | || || |||||||| Sbjct: 1628 atggtgcatgccgtaatctcgtgtgtac 1655
>ref|NM_179204.1| Arabidopsis thaliana ATP binding / ATP-dependent helicase/ helicase/ nucleic acid binding AT4G00660 transcript variant AT4G00660.1 mRNA, complete cds Length = 2787 Score = 182 bits (92), Expect = 8e-43 Identities = 359/448 (80%) Strand = Plus / Plus Query: 81 tgcttattatggatgaggcagacaagcttctttctcccgagttccaaccttctgtggagc 140 ||||| ||||||||||||| ||||||||| | |||| |||||||||||||| ||||| | Sbjct: 1208 tgcttgttatggatgaggctgacaagcttttgtctcaagagttccaaccttcagtggaac 1267 Query: 141 agttaattcgataccttccatcgagtcgacagattctaatgttctctgcaacattcccgg 200 | || ||| | | |||||| ||||| |||||| | |||||||| || || ||||| | Sbjct: 1268 atttgattagctttcttccagaaagtcgtcagattttgatgttctcagccaccttccctg 1327 Query: 201 tcactgtcaaggctttcaaggacaaatatctgcctaaaccctatgttattaatcttatgg 260 |||||||||||| ||| ||||| | | |||| | || || || || || ||||| |||| Sbjct: 1328 tcactgtcaaggattttaaggataggtttctgacgaatccttacgtcatcaatctcatgg 1387 Query: 261 acgaacttacattgaagggaattacccagttctacgcttttgttgaagaaaggcagaaag 320 | |||||||| | ||||| |||||||| ||||| ||||| ||||||||||| |||||| Sbjct: 1388 atgaacttacgctcaagggtattacccaattctatgctttcgttgaagaaagacagaaaa 1447 Query: 321 tccattgtctgaacactcttttttccaagctgcaaattaatcaatctataatattctgta 380 | ||||| |||| || || || ||||||||||||||||| ||||| || |||||||| | Sbjct: 1448 ttcattgcttgaatacactattctccaagctgcaaattaaccaatcaatcatattctgca 1507 Query: 381 actccgtaaatcgtgttgaactactggcgaagaagatcacagagcttggttactcttgct 440 | || ||||||||||| || || | || ||||| |||||||| ||||| || || |||| Sbjct: 1508 attctgtaaatcgtgtggagctcttagccaagaaaatcacagaacttgggtattcatgct 1567 Query: 441 tctacatccatgctaaaatgctgcaggatcatcgtaatagagtattccatgatttccgta 500 | ||||||||||| || ||||| || || || || || ||||| |||||||| ||||| | Sbjct: 1568 tttacatccatgcaaagatgcttcaagaccaccgaaacagagtgttccatgacttccgga 1627 Query: 501 atggcgcatgcaggaaccttgtgtgtac 528 |||| |||||| | || || |||||||| Sbjct: 1628 atggtgcatgccgtaatctcgtgtgtac 1655
>gb|AY113985.1| Arabidopsis thaliana putative RNA helicase (At4g00660) mRNA, complete cds Length = 1549 Score = 182 bits (92), Expect = 8e-43 Identities = 359/448 (80%) Strand = Plus / Plus Query: 81 tgcttattatggatgaggcagacaagcttctttctcccgagttccaaccttctgtggagc 140 ||||| ||||||||||||| ||||||||| | |||| |||||||||||||| ||||| | Sbjct: 827 tgcttgttatggatgaggctgacaagcttttgtctcaagagttccaaccttcagtggaac 886 Query: 141 agttaattcgataccttccatcgagtcgacagattctaatgttctctgcaacattcccgg 200 | || ||| | | |||||| ||||| |||||| | |||||||| || || ||||| | Sbjct: 887 atttgattagctttcttccagaaagtcgtcagattttgatgttctcagccaccttccctg 946 Query: 201 tcactgtcaaggctttcaaggacaaatatctgcctaaaccctatgttattaatcttatgg 260 |||||||||||| ||| ||||| | | |||| | || || || || || ||||| |||| Sbjct: 947 tcactgtcaaggattttaaggataggtttctgacgaatccttacgtcatcaatctcatgg 1006 Query: 261 acgaacttacattgaagggaattacccagttctacgcttttgttgaagaaaggcagaaag 320 | |||||||| | ||||| |||||||| ||||| ||||| ||||||||||| |||||| Sbjct: 1007 atgaacttacgctcaagggtattacccaattctatgctttcgttgaagaaagacagaaaa 1066 Query: 321 tccattgtctgaacactcttttttccaagctgcaaattaatcaatctataatattctgta 380 | ||||| |||| || || || ||||||||||||||||| ||||| || |||||||| | Sbjct: 1067 ttcattgcttgaatacactattctccaagctgcaaattaaccaatcaatcatattctgca 1126 Query: 381 actccgtaaatcgtgttgaactactggcgaagaagatcacagagcttggttactcttgct 440 | || ||||||||||| || || | || ||||| |||||||| ||||| || || |||| Sbjct: 1127 attctgtaaatcgtgtggagctcttagccaagaaaatcacagaacttgggtattcatgct 1186 Query: 441 tctacatccatgctaaaatgctgcaggatcatcgtaatagagtattccatgatttccgta 500 | ||||||||||| || ||||| || || || || || ||||| |||||||| ||||| | Sbjct: 1187 tttacatccatgcaaagatgcttcaagaccaccgaaacagagtgttccatgacttccgga 1246 Query: 501 atggcgcatgcaggaaccttgtgtgtac 528 |||| |||||| | || || |||||||| Sbjct: 1247 atggtgcatgccgtaatctcgtgtgtac 1274
>gb|AY080837.1| Arabidopsis thaliana putative RNA helicase (At4g00660) mRNA, complete cds Length = 2319 Score = 182 bits (92), Expect = 8e-43 Identities = 359/448 (80%) Strand = Plus / Plus Query: 81 tgcttattatggatgaggcagacaagcttctttctcccgagttccaaccttctgtggagc 140 ||||| ||||||||||||| ||||||||| | |||| |||||||||||||| ||||| | Sbjct: 1198 tgcttgttatggatgaggctgacaagcttttgtctcaagagttccaaccttcagtggaac 1257 Query: 141 agttaattcgataccttccatcgagtcgacagattctaatgttctctgcaacattcccgg 200 | || ||| | | |||||| ||||| |||||| | |||||||| || || ||||| | Sbjct: 1258 atttgattagctttcttccagaaagtcgtcagattttgatgttctcagccaccttccctg 1317 Query: 201 tcactgtcaaggctttcaaggacaaatatctgcctaaaccctatgttattaatcttatgg 260 |||||||||||| ||| ||||| | | |||| | || || || || || ||||| |||| Sbjct: 1318 tcactgtcaaggattttaaggataggtttctgacgaatccttacgtcatcaatctcatgg 1377 Query: 261 acgaacttacattgaagggaattacccagttctacgcttttgttgaagaaaggcagaaag 320 | |||||||| | ||||| |||||||| ||||| ||||| ||||||||||| |||||| Sbjct: 1378 atgaacttacgctcaagggtattacccaattctatgctttcgttgaagaaagacagaaaa 1437 Query: 321 tccattgtctgaacactcttttttccaagctgcaaattaatcaatctataatattctgta 380 | ||||| |||| || || || ||||||||||||||||| ||||| || |||||||| | Sbjct: 1438 ttcattgcttgaatacactattctccaagctgcaaattaaccaatcaatcatattctgca 1497 Query: 381 actccgtaaatcgtgttgaactactggcgaagaagatcacagagcttggttactcttgct 440 | || ||||||||||| || || | || ||||| |||||||| ||||| || || |||| Sbjct: 1498 attctgtaaatcgtgtggagctcttagccaagaaaatcacagaacttgggtattcatgct 1557 Query: 441 tctacatccatgctaaaatgctgcaggatcatcgtaatagagtattccatgatttccgta 500 | ||||||||||| || ||||| || || || || || ||||| |||||||| ||||| | Sbjct: 1558 tttacatccatgcaaagatgcttcaagaccaccgaaacagagtgttccatgacttccgga 1617 Query: 501 atggcgcatgcaggaaccttgtgtgtac 528 |||| |||||| | || || |||||||| Sbjct: 1618 atggtgcatgccgtaatctcgtgtgtac 1645
>emb|AJ010460.1|ATH010460 Arabidopsis thaliana mRNA for DEAD box RNA helicase, RH8 Length = 2015 Score = 174 bits (88), Expect = 2e-40 Identities = 358/448 (79%) Strand = Plus / Plus Query: 81 tgcttattatggatgaggcagacaagcttctttctcccgagttccaaccttctgtggagc 140 ||||| ||||||||||||| ||||||||| | |||| |||||||||||||| ||||| | Sbjct: 889 tgcttgttatggatgaggctgacaagcttttgtctcaagagttccaaccttcagtggaac 948 Query: 141 agttaattcgataccttccatcgagtcgacagattctaatgttctctgcaacattcccgg 200 | || ||| | | |||||| ||||| |||||| | |||||||| || || ||||| | Sbjct: 949 atttgattagctttcttccagaaagtcgtcagattttgatgttctcagccaccttccctg 1008 Query: 201 tcactgtcaaggctttcaaggacaaatatctgcctaaaccctatgttattaatcttatgg 260 |||||||||||| ||| ||||| | | |||| | || || || || || ||||| |||| Sbjct: 1009 tcactgtcaaggattttaaggataggtttctgacgaatccttacgtcatcaatctcatgg 1068 Query: 261 acgaacttacattgaagggaattacccagttctacgcttttgttgaagaaaggcagaaag 320 | |||||||| | ||||| |||||||| ||||| ||||| ||||||||||| |||||| Sbjct: 1069 atgaacttacgctcaagggtattacccaattctatgctttcgttgaagaaagacagaaaa 1128 Query: 321 tccattgtctgaacactcttttttccaagctgcaaattaatcaatctataatattctgta 380 | ||||| |||| || || || ||||||||||||||||| ||||| || |||||||| | Sbjct: 1129 ttcattgcttgaatacactattctccaagctgcaaattaaccaatcaatcatattctgca 1188 Query: 381 actccgtaaatcgtgttgaactactggcgaagaagatcacagagcttggttactcttgct 440 | || ||||||||||| || || | || ||||| |||||||| ||||| || || |||| Sbjct: 1189 attctgtaaatcgtgtggagctcttagccaagaaaatcacagaacttgggtattcatgct 1248 Query: 441 tctacatccatgctaaaatgctgcaggatcatcgtaatagagtattccatgatttccgta 500 ||||||||||| || ||||| || || || || || ||||| |||||||| ||||| | Sbjct: 1249 cttacatccatgcaaagatgcttcaagaccaccgaaacagagtgttccatgacttccgga 1308 Query: 501 atggcgcatgcaggaaccttgtgtgtac 528 |||| |||||| | || || |||||||| Sbjct: 1309 atggtgcatgccgtaatctcgtgtgtac 1336
>emb|BX828369.1|CNS0A2CA Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH80ZF11 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 2550 Score = 174 bits (88), Expect = 2e-40 Identities = 358/448 (79%) Strand = Plus / Plus Query: 81 tgcttattatggatgaggcagacaagcttctttctcccgagttccaaccttctgtggagc 140 ||||| ||||||||||||| ||||||||| | |||| |||||||||||||| ||||| | Sbjct: 1123 tgcttgttatggatgaggctgacaagcttttgtctcaagagttccaaccttcagtggaac 1182 Query: 141 agttaattcgataccttccatcgagtcgacagattctaatgttctctgcaacattcccgg 200 | || ||| | | |||||| ||||| |||||| | |||||||| || || ||||| | Sbjct: 1183 atttgattagctttcttccagaaagtcgtcagattttgatgttctcagccaccttccctg 1242 Query: 201 tcactgtcaaggctttcaaggacaaatatctgcctaaaccctatgttattaatcttatgg 260 |||||||||||| ||| ||||| | | |||| | || || || || || ||||| |||| Sbjct: 1243 tcactgtcaaggattttaaggataggtttctgacgaatccttacgtcatcaatctcatgg 1302 Query: 261 acgaacttacattgaagggaattacccagttctacgcttttgttgaagaaaggcagaaag 320 | |||||||| | ||||| |||||||| ||||| ||||| ||||||||||| |||||| Sbjct: 1303 atgaacttacgctcaagggtattacccaattctatgctttcgttgaagaaagacagaaaa 1362 Query: 321 tccattgtctgaacactcttttttccaagctgcaaattaatcaatctataatattctgta 380 | ||||| |||| || || || ||||||||||||||||| ||||| || |||||||| | Sbjct: 1363 ttcattgcttgaatacactattctccaagctgcaaattaaccaatcaatcatattctgca 1422 Query: 381 actccgtaaatcgtgttgaactactggcgaagaagatcacagagcttggttactcttgct 440 | || ||||||||||| || || | || ||||| |||||||| ||||| || || |||| Sbjct: 1423 attctgtaaatcgtgtggagctcttagccaagaaaatcacagaacttgggtattcatgct 1482 Query: 441 tctacatccatgctaaaatgctgcaggatcatcgtaatagagtattccatgatttccgta 500 | ||||||||||| || ||||| || || | || || ||||| |||||||| ||||| | Sbjct: 1483 tttacatccatgcaaagatgcttcaagaccgccgaaacagagtgttccatgacttccgga 1542 Query: 501 atggcgcatgcaggaaccttgtgtgtac 528 |||| |||||| | || || |||||||| Sbjct: 1543 atggtgcatgccgtaatctcgtgtgtac 1570
>ref|NM_202743.1| Arabidopsis thaliana ATP binding / ATP-dependent helicase/ helicase/ nucleic acid binding AT3G61240 transcript variant AT3G61240.2 mRNA, complete cds Length = 2129 Score = 105 bits (53), Expect = 2e-19 Identities = 215/269 (79%) Strand = Plus / Plus Query: 296 gcttttgttgaagaaaggcagaaagtccattgtctgaacactcttttttccaagctgcaa 355 |||||||| |||||||| ||||| || || || || ||||| ||||| || ||||||||| Sbjct: 1428 gcttttgtcgaagaaagacagaaggttcactgcctcaacacacttttctctaagctgcaa 1487 Query: 356 attaatcaatctataatattctgtaactccgtaaatcgtgttgaactactggcgaagaag 415 || |||||||| ||||| || || ||||| || ||||| || || || |||| ||||| Sbjct: 1488 ataaatcaatcgataatcttttgcaactctgtcaatcgcgtggagctgttggctaagaaa 1547 Query: 416 atcacagagcttggttactcttgcttctacatccatgctaaaatgctgcaggatcatcgt 475 |||||||| |||||||| || ||||||||||| ||||| || ||| | || || || | Sbjct: 1548 atcacagaacttggttattcatgcttctacattcatgcaaagatggttcaagaccacagg 1607 Query: 476 aatagagtattccatgatttccgtaatggcgcatgcaggaaccttgtgtgtacagatctt 535 || ||||||||||| || ||||| ||||| || |||||||| || || || || ||||| Sbjct: 1608 aacagagtattccacgagttccgcaatggtgcttgcaggaatctcgtttgcactgatctg 1667 Query: 536 tttacaaggggaatagatattcaagctgt 564 ||||| | ||||| || ||||||||||| Sbjct: 1668 tttactcgaggaattgacattcaagctgt 1696 Score = 48.1 bits (24), Expect = 0.031 Identities = 57/68 (83%) Strand = Plus / Plus Query: 66 tgaaggactgttcaatgcttattatggatgaggcagacaagcttctttctcccgagttcc 125 |||| |||||| | |||||| | ||||||||||| ||||||||| | ||| | || |||| Sbjct: 1198 tgaaagactgtgcgatgcttgtaatggatgaggccgacaagcttttgtctgcagaattcc 1257 Query: 126 aaccttct 133 |||||||| Sbjct: 1258 aaccttct 1265
>ref|NM_115988.2| Arabidopsis thaliana ATP binding / ATP-dependent helicase/ helicase/ nucleic acid binding AT3G61240 transcript variant AT3G61240.1 mRNA, complete cds Length = 2402 Score = 105 bits (53), Expect = 2e-19 Identities = 215/269 (79%) Strand = Plus / Plus Query: 296 gcttttgttgaagaaaggcagaaagtccattgtctgaacactcttttttccaagctgcaa 355 |||||||| |||||||| ||||| || || || || ||||| ||||| || ||||||||| Sbjct: 1428 gcttttgtcgaagaaagacagaaggttcactgcctcaacacacttttctctaagctgcaa 1487 Query: 356 attaatcaatctataatattctgtaactccgtaaatcgtgttgaactactggcgaagaag 415 || |||||||| ||||| || || ||||| || ||||| || || || |||| ||||| Sbjct: 1488 ataaatcaatcgataatcttttgcaactctgtcaatcgcgtggagctgttggctaagaaa 1547 Query: 416 atcacagagcttggttactcttgcttctacatccatgctaaaatgctgcaggatcatcgt 475 |||||||| |||||||| || ||||||||||| ||||| || ||| | || || || | Sbjct: 1548 atcacagaacttggttattcatgcttctacattcatgcaaagatggttcaagaccacagg 1607 Query: 476 aatagagtattccatgatttccgtaatggcgcatgcaggaaccttgtgtgtacagatctt 535 || ||||||||||| || ||||| ||||| || |||||||| || || || || ||||| Sbjct: 1608 aacagagtattccacgagttccgcaatggtgcttgcaggaatctcgtttgcactgatctg 1667 Query: 536 tttacaaggggaatagatattcaagctgt 564 ||||| | ||||| || ||||||||||| Sbjct: 1668 tttactcgaggaattgacattcaagctgt 1696 Score = 48.1 bits (24), Expect = 0.031 Identities = 57/68 (83%) Strand = Plus / Plus Query: 66 tgaaggactgttcaatgcttattatggatgaggcagacaagcttctttctcccgagttcc 125 |||| |||||| | |||||| | ||||||||||| ||||||||| | ||| | || |||| Sbjct: 1198 tgaaagactgtgcgatgcttgtaatggatgaggccgacaagcttttgtctgcagaattcc 1257 Query: 126 aaccttct 133 |||||||| Sbjct: 1258 aaccttct 1265
>ref|NM_130144.3| Arabidopsis thaliana ATP binding / ATP-dependent helicase/ helicase/ nucleic acid binding AT2G45810 mRNA, complete cds Length = 2329 Score = 105 bits (53), Expect = 2e-19 Identities = 215/269 (79%) Strand = Plus / Plus Query: 296 gcttttgttgaagaaaggcagaaagtccattgtctgaacactcttttttccaagctgcaa 355 |||||||||||||| || ||||| || || || || ||||| || || || ||||| ||| Sbjct: 1348 gcttttgttgaagagagacagaaggtgcactgccttaacacgctattctctaagctccaa 1407 Query: 356 attaatcaatctataatattctgtaactccgtaaatcgtgttgaactactggcgaagaag 415 || || ||||| || || || || ||||| || ||||||||||| || |||| ||||| Sbjct: 1408 ataaaccaatccattatcttttgcaactctgttaatcgtgttgagctgttggccaagaaa 1467 Query: 416 atcacagagcttggttactcttgcttctacatccatgctaaaatgctgcaggatcatcgt 475 || ||||| ||||||||||| |||||||| |||||||| || ||| | || || ||||| Sbjct: 1468 attacagaacttggttactcatgcttctatatccatgcaaagatggttcaagaccatcgg 1527 Query: 476 aatagagtattccatgatttccgtaatggcgcatgcaggaaccttgtgtgtacagatctt 535 || || || |||||||||||||| ||||| |||||||| || ||||| || || ||| | Sbjct: 1528 aacagggttttccatgatttccgcaatggtgcatgcagaaatcttgtttgcactgatttg 1587 Query: 536 tttacaaggggaatagatattcaagctgt 564 |||||| | || || || ||||||||||| Sbjct: 1588 tttacacgtgggattgacattcaagctgt 1616
>gb|BT000038.1| Arabidopsis thaliana DEAD box RNA helicase RH12 (At3g61240) mRNA, complete cds Length = 1541 Score = 105 bits (53), Expect = 2e-19 Identities = 215/269 (79%) Strand = Plus / Plus Query: 296 gcttttgttgaagaaaggcagaaagtccattgtctgaacactcttttttccaagctgcaa 355 |||||||| |||||||| ||||| || || || || ||||| ||||| || ||||||||| Sbjct: 1021 gcttttgtcgaagaaagacagaaggttcactgcctcaacacacttttctctaagctgcaa 1080 Query: 356 attaatcaatctataatattctgtaactccgtaaatcgtgttgaactactggcgaagaag 415 || |||||||| ||||| || || ||||| || ||||| || || || |||| ||||| Sbjct: 1081 ataaatcaatcgataatcttttgcaactctgtcaatcgcgtggagctgttggctaagaaa 1140 Query: 416 atcacagagcttggttactcttgcttctacatccatgctaaaatgctgcaggatcatcgt 475 |||||||| |||||||| || ||||||||||| ||||| || ||| | || || || | Sbjct: 1141 atcacagaacttggttattcatgcttctacattcatgcaaagatggttcaagaccacagg 1200 Query: 476 aatagagtattccatgatttccgtaatggcgcatgcaggaaccttgtgtgtacagatctt 535 || ||||||||||| || ||||| ||||| || |||||||| || || || || ||||| Sbjct: 1201 aacagagtattccacgagttccgcaatggtgcttgcaggaatctcgtttgcactgatctg 1260 Query: 536 tttacaaggggaatagatattcaagctgt 564 ||||| | ||||| || ||||||||||| Sbjct: 1261 tttactcgaggaattgacattcaagctgt 1289 Score = 48.1 bits (24), Expect = 0.031 Identities = 57/68 (83%) Strand = Plus / Plus Query: 66 tgaaggactgttcaatgcttattatggatgaggcagacaagcttctttctcccgagttcc 125 |||| |||||| | |||||| | ||||||||||| ||||||||| | ||| | || |||| Sbjct: 791 tgaaagactgtgcgatgcttgtaatggatgaggccgacaagcttttgtctgcagaattcc 850 Query: 126 aaccttct 133 |||||||| Sbjct: 851 aaccttct 858
>emb|AJ010464.1|ATH010464 Arabidopsis thaliana mRNA for DEAD box RNA helicase, RH12 Length = 2221 Score = 105 bits (53), Expect = 2e-19 Identities = 215/269 (79%) Strand = Plus / Plus Query: 296 gcttttgttgaagaaaggcagaaagtccattgtctgaacactcttttttccaagctgcaa 355 |||||||| |||||||| ||||| || || || || ||||| ||||| || ||||||||| Sbjct: 1389 gcttttgtcgaagaaagacagaaggttcactgcctcaacacacttttctctaagctgcaa 1448 Query: 356 attaatcaatctataatattctgtaactccgtaaatcgtgttgaactactggcgaagaag 415 || |||||||| ||||| || || ||||| || ||||| || || || |||| ||||| Sbjct: 1449 ataaatcaatcgataatcttttgcaactctgtcaatcgcgtggagctgttggctaagaaa 1508 Query: 416 atcacagagcttggttactcttgcttctacatccatgctaaaatgctgcaggatcatcgt 475 |||||||| |||||||| || ||||||||||| ||||| || ||| | || || || | Sbjct: 1509 atcacagaacttggttattcatgcttctacattcatgcaaagatggttcaagaccacagg 1568 Query: 476 aatagagtattccatgatttccgtaatggcgcatgcaggaaccttgtgtgtacagatctt 535 || ||||||||||| || ||||| ||||| || |||||||| || || || || ||||| Sbjct: 1569 aacagagtattccacgagttccgcaatggtgcttgcaggaatctcgtttgcactgatctg 1628 Query: 536 tttacaaggggaatagatattcaagctgt 564 ||||| | ||||| || ||||||||||| Sbjct: 1629 tttactcgaggaattgacattcaagctgt 1657 Score = 48.1 bits (24), Expect = 0.031 Identities = 57/68 (83%) Strand = Plus / Plus Query: 66 tgaaggactgttcaatgcttattatggatgaggcagacaagcttctttctcccgagttcc 125 |||| |||||| | |||||| | ||||||||||| ||||||||| | ||| | || |||| Sbjct: 1159 tgaaagactgtgcgatgcttgtaatggatgaggccgacaagcttttgtctgcagaattcc 1218 Query: 126 aaccttct 133 |||||||| Sbjct: 1219 aaccttct 1226
>gb|AY120712.1| Arabidopsis thaliana DEAD box RNA helicase RH12 (At3g61240) mRNA, complete cds Length = 2164 Score = 105 bits (53), Expect = 2e-19 Identities = 215/269 (79%) Strand = Plus / Plus Query: 296 gcttttgttgaagaaaggcagaaagtccattgtctgaacactcttttttccaagctgcaa 355 |||||||| |||||||| ||||| || || || || ||||| ||||| || ||||||||| Sbjct: 1428 gcttttgtcgaagaaagacagaaggttcactgcctcaacacacttttctctaagctgcaa 1487 Query: 356 attaatcaatctataatattctgtaactccgtaaatcgtgttgaactactggcgaagaag 415 || |||||||| ||||| || || ||||| || ||||| || || || |||| ||||| Sbjct: 1488 ataaatcaatcgataatcttttgcaactctgtcaatcgcgtggagctgttggctaagaaa 1547 Query: 416 atcacagagcttggttactcttgcttctacatccatgctaaaatgctgcaggatcatcgt 475 |||||||| |||||||| || ||||||||||| ||||| || ||| | || || || | Sbjct: 1548 atcacagaacttggttattcatgcttctacattcatgcaaagatggttcaagaccacagg 1607 Query: 476 aatagagtattccatgatttccgtaatggcgcatgcaggaaccttgtgtgtacagatctt 535 || ||||||||||| || ||||| ||||| || |||||||| || || || || ||||| Sbjct: 1608 aacagagtattccacgagttccgcaatggtgcttgcaggaatctcgtttgcactgatctg 1667 Query: 536 tttacaaggggaatagatattcaagctgt 564 ||||| | ||||| || ||||||||||| Sbjct: 1668 tttactcgaggaattgacattcaagctgt 1696 Score = 48.1 bits (24), Expect = 0.031 Identities = 57/68 (83%) Strand = Plus / Plus Query: 66 tgaaggactgttcaatgcttattatggatgaggcagacaagcttctttctcccgagttcc 125 |||| |||||| | |||||| | ||||||||||| ||||||||| | ||| | || |||| Sbjct: 1198 tgaaagactgtgcgatgcttgtaatggatgaggccgacaagcttttgtctgcagaattcc 1257 Query: 126 aaccttct 133 |||||||| Sbjct: 1258 aaccttct 1265
>gb|AY039862.1| Arabidopsis thaliana At2g45810/F4I18.21 mRNA, complete cds Length = 2191 Score = 105 bits (53), Expect = 2e-19 Identities = 215/269 (79%) Strand = Plus / Plus Query: 296 gcttttgttgaagaaaggcagaaagtccattgtctgaacactcttttttccaagctgcaa 355 |||||||||||||| || ||||| || || || || ||||| || || || ||||| ||| Sbjct: 1245 gcttttgttgaagagagacagaaggtgcactgccttaacacgctattctctaagctccaa 1304 Query: 356 attaatcaatctataatattctgtaactccgtaaatcgtgttgaactactggcgaagaag 415 || || ||||| || || || || ||||| || ||||||||||| || |||| ||||| Sbjct: 1305 ataaaccaatccattatcttttgcaactctgttaatcgtgttgagctgttggccaagaaa 1364 Query: 416 atcacagagcttggttactcttgcttctacatccatgctaaaatgctgcaggatcatcgt 475 || ||||| ||||||||||| |||||||| |||||||| || ||| | || || ||||| Sbjct: 1365 attacagaacttggttactcatgcttctatatccatgcaaagatggttcaagaccatcgg 1424 Query: 476 aatagagtattccatgatttccgtaatggcgcatgcaggaaccttgtgtgtacagatctt 535 || || || |||||||||||||| ||||| |||||||| || ||||| || || ||| | Sbjct: 1425 aacagggttttccatgatttccgcaatggtgcatgcagaaatcttgtttgcactgatttg 1484 Query: 536 tttacaaggggaatagatattcaagctgt 564 |||||| | || || || ||||||||||| Sbjct: 1485 tttacacgtgggattgacattcaagctgt 1513
>emb|BX823866.1|CNS0A4PS Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS85ZG10 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 2113 Score = 105 bits (53), Expect = 2e-19 Identities = 215/269 (79%) Strand = Plus / Plus Query: 296 gcttttgttgaagaaaggcagaaagtccattgtctgaacactcttttttccaagctgcaa 355 |||||||| |||||||| ||||| || || || || ||||| ||||| || ||||||||| Sbjct: 1411 gcttttgtcgaagaaagacagaaggttcactgcctcaacacacttttctctaagctgcaa 1470 Query: 356 attaatcaatctataatattctgtaactccgtaaatcgtgttgaactactggcgaagaag 415 || |||||||| ||||| || || ||||| || ||||| || || || |||| ||||| Sbjct: 1471 ataaatcaatcgataatcttttgcaactctgtcaatcgcgtggagctgttggctaagaaa 1530 Query: 416 atcacagagcttggttactcttgcttctacatccatgctaaaatgctgcaggatcatcgt 475 |||||||| |||||||| || ||||||||||| ||||| || ||| | || || || | Sbjct: 1531 atcacagaacttggttattcatgcttctacattcatgcaaagatggttcaagaccacagg 1590 Query: 476 aatagagtattccatgatttccgtaatggcgcatgcaggaaccttgtgtgtacagatctt 535 || ||||||||||| || ||||| ||||| || |||||||| || || || || ||||| Sbjct: 1591 aacagagtattccacgagttccgcaatggtgcttgcaggaatctcgtttgcactgatctg 1650 Query: 536 tttacaaggggaatagatattcaagctgt 564 ||||| | ||||| || ||||||||||| Sbjct: 1651 tttactcgaggaattgacattcaagctgt 1679 Score = 48.1 bits (24), Expect = 0.031 Identities = 57/68 (83%) Strand = Plus / Plus Query: 66 tgaaggactgttcaatgcttattatggatgaggcagacaagcttctttctcccgagttcc 125 |||| |||||| | |||||| | ||||||||||| ||||||||| | ||| | || |||| Sbjct: 1181 tgaaagactgtgcgatgcttgtaatggatgaggccgacaagcttttgtctgcagaattcc 1240 Query: 126 aaccttct 133 |||||||| Sbjct: 1241 aaccttct 1248
>gb|BT002709.1| Arabidopsis thaliana At2g45810/F4I18.21 gene, complete cds Length = 1587 Score = 105 bits (53), Expect = 2e-19 Identities = 215/269 (79%) Strand = Plus / Plus Query: 296 gcttttgttgaagaaaggcagaaagtccattgtctgaacactcttttttccaagctgcaa 355 |||||||||||||| || ||||| || || || || ||||| || || || ||||| ||| Sbjct: 1111 gcttttgttgaagagagacagaaggtgcactgccttaacacgctattctctaagctccaa 1170 Query: 356 attaatcaatctataatattctgtaactccgtaaatcgtgttgaactactggcgaagaag 415 || || ||||| || || || || ||||| || ||||||||||| || |||| ||||| Sbjct: 1171 ataaaccaatccattatcttttgcaactctgttaatcgtgttgagctgttggccaagaaa 1230 Query: 416 atcacagagcttggttactcttgcttctacatccatgctaaaatgctgcaggatcatcgt 475 || ||||| ||||||||||| |||||||| |||||||| || ||| | || || ||||| Sbjct: 1231 attacagaacttggttactcatgcttctatatccatgcaaagatggttcaagaccatcgg 1290 Query: 476 aatagagtattccatgatttccgtaatggcgcatgcaggaaccttgtgtgtacagatctt 535 || || || |||||||||||||| ||||| |||||||| || ||||| || || ||| | Sbjct: 1291 aacagggttttccatgatttccgcaatggtgcatgcagaaatcttgtttgcactgatttg 1350 Query: 536 tttacaaggggaatagatattcaagctgt 564 |||||| | || || || ||||||||||| Sbjct: 1351 tttacacgtgggattgacattcaagctgt 1379
>gb|AC084023.8| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0062C05 map S21174S, complete sequence Length = 178867 Score = 95.6 bits (48), Expect = 1e-16 Identities = 132/160 (82%) Strand = Plus / Minus Query: 371 atattctgtaactccgtaaatcgtgttgaactactggcgaagaagatcacagagcttggt 430 |||||||||||||| || || | ||||| |||||||| ||||| ||||| |||||||| Sbjct: 17715 atattctgtaactctgttaacagagttgagctactggctaagaaaatcaccgagcttggc 17656 Query: 431 tactcttgcttctacatccatgctaaaatgctgcaggatcatcgtaatagagtattccat 490 || || ||||||||||| ||||| |||||| |||| || ||||| || |||| || ||| Sbjct: 17655 tattcatgcttctacattcatgcaaaaatgttgcaagaccatcgaaaccgagtgtttcat 17596 Query: 491 gatttccgtaatggcgcatgcaggaaccttgtgtgtacag 530 ||||| || ||||| || ||||| ||||||||||| |||| Sbjct: 17595 gattttcgcaatggtgcttgcagaaaccttgtgtgcacag 17556 Score = 75.8 bits (38), Expect = 1e-10 Identities = 110/134 (82%) Strand = Plus / Minus Query: 209 aaggctttcaaggacaaatatctgcctaaaccctatgttattaatcttatggacgaactt 268 |||| |||||| || ||||| || |||| || |||||||||||||| ||||| ||||| Sbjct: 17963 aaggatttcaaagagaaatacctacctaggccttatgttattaatctcatggatgaacta 17904 Query: 269 acattgaagggaattacccagttctacgcttttgttgaagaaaggcagaaagtccattgt 328 ||| | ||||||||||| || | ||| ||||| || |||||||| |||||||| || ||| Sbjct: 17903 acactaaagggaattacacaatactatgctttcgtggaagaaagacagaaagttcactgt 17844 Query: 329 ctgaacactctttt 342 ||||| || ||||| Sbjct: 17843 ctgaatacactttt 17830
>ref|XM_783601.1| PREDICTED: Strongylocentrotus purpuratus similar to Probable ATP-dependent RNA helicase p54 (Oncogene RCK homolog) (DEAD-box protein 6) (LOC583703), mRNA Length = 1719 Score = 95.6 bits (48), Expect = 1e-16 Identities = 117/140 (83%) Strand = Plus / Plus Query: 392 cgtgttgaactactggcgaagaagatcacagagcttggttactcttgcttctacatccat 451 ||||| ||||| || || |||||||||||||||||||| ||||| || | |||||||||| Sbjct: 1294 cgtgtggaactccttgccaagaagatcacagagcttggctactcctgttactacatccat 1353 Query: 452 gctaaaatgctgcaggatcatcgtaatagagtattccatgatttccgtaatggcgcatgc 511 | |||| |||||| ||||| || |||||||||||||| ||||| || ||||| ||| Sbjct: 1354 tcacgcatgcagcaggaacatcgaaacagagtattccatgacttccgcaacggcgcctgc 1413 Query: 512 aggaaccttgtgtgtacaga 531 || |||||||| |||||||| Sbjct: 1414 agaaaccttgtctgtacaga 1433
>gb|AC078840.6| Oryza sativa chromosome 10 BAC OSJNBb0073N24 genomic sequence, complete sequence Length = 130058 Score = 95.6 bits (48), Expect = 1e-16 Identities = 132/160 (82%) Strand = Plus / Minus Query: 371 atattctgtaactccgtaaatcgtgttgaactactggcgaagaagatcacagagcttggt 430 |||||||||||||| || || | ||||| |||||||| ||||| ||||| |||||||| Sbjct: 83573 atattctgtaactctgttaacagagttgagctactggctaagaaaatcaccgagcttggc 83514 Query: 431 tactcttgcttctacatccatgctaaaatgctgcaggatcatcgtaatagagtattccat 490 || || ||||||||||| ||||| |||||| |||| || ||||| || |||| || ||| Sbjct: 83513 tattcatgcttctacattcatgcaaaaatgttgcaagaccatcgaaaccgagtgtttcat 83454 Query: 491 gatttccgtaatggcgcatgcaggaaccttgtgtgtacag 530 ||||| || ||||| || ||||| ||||||||||| |||| Sbjct: 83453 gattttcgcaatggtgcttgcagaaaccttgtgtgcacag 83414 Score = 75.8 bits (38), Expect = 1e-10 Identities = 110/134 (82%) Strand = Plus / Minus Query: 209 aaggctttcaaggacaaatatctgcctaaaccctatgttattaatcttatggacgaactt 268 |||| |||||| || ||||| || |||| || |||||||||||||| ||||| ||||| Sbjct: 83821 aaggatttcaaagagaaatacctacctaggccttatgttattaatctcatggatgaacta 83762 Query: 269 acattgaagggaattacccagttctacgcttttgttgaagaaaggcagaaagtccattgt 328 ||| | ||||||||||| || | ||| ||||| || |||||||| |||||||| || ||| Sbjct: 83761 acactaaagggaattacacaatactatgctttcgtggaagaaagacagaaagttcactgt 83702 Query: 329 ctgaacactctttt 342 ||||| || ||||| Sbjct: 83701 ctgaatacactttt 83688
>dbj|AP007167.1| Aspergillus oryzae RIB40 genomic DNA, SC020 Length = 1824958 Score = 95.6 bits (48), Expect = 1e-16 Identities = 108/128 (84%) Strand = Plus / Minus Query: 296 gcttttgttgaagaaaggcagaaagtccattgtctgaacactcttttttccaagctgcaa 355 |||||||| ||||||| ||| ||||||||||| || ||||||||||||||||| || ||| Sbjct: 29578 gcttttgtggaagaaaagcaaaaagtccattgccttaacactcttttttccaaacttcaa 29519 Query: 356 attaatcaatctataatattctgtaactccgtaaatcgtgttgaactactggcgaagaag 415 ||||||||||| || || ||||| || || |||||| ||||| || || || |||||| Sbjct: 29518 attaatcaatcaatcatcttctgcaattcaacaaatcgcgttgagcttctcgcaaagaag 29459 Query: 416 atcacaga 423 |||||||| Sbjct: 29458 atcacaga 29451
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 95.6 bits (48), Expect = 1e-16 Identities = 132/160 (82%) Strand = Plus / Minus Query: 371 atattctgtaactccgtaaatcgtgttgaactactggcgaagaagatcacagagcttggt 430 |||||||||||||| || || | ||||| |||||||| ||||| ||||| |||||||| Sbjct: 18722295 atattctgtaactctgttaacagagttgagctactggctaagaaaatcaccgagcttggc 18722236 Query: 431 tactcttgcttctacatccatgctaaaatgctgcaggatcatcgtaatagagtattccat 490 || || ||||||||||| ||||| |||||| |||| || ||||| || |||| || ||| Sbjct: 18722235 tattcatgcttctacattcatgcaaaaatgttgcaagaccatcgaaaccgagtgtttcat 18722176 Query: 491 gatttccgtaatggcgcatgcaggaaccttgtgtgtacag 530 ||||| || ||||| || ||||| ||||||||||| |||| Sbjct: 18722175 gattttcgcaatggtgcttgcagaaaccttgtgtgcacag 18722136 Score = 75.8 bits (38), Expect = 1e-10 Identities = 110/134 (82%) Strand = Plus / Minus Query: 209 aaggctttcaaggacaaatatctgcctaaaccctatgttattaatcttatggacgaactt 268 |||| |||||| || ||||| || |||| || |||||||||||||| ||||| ||||| Sbjct: 18722543 aaggatttcaaagagaaatacctacctaggccttatgttattaatctcatggatgaacta 18722484 Query: 269 acattgaagggaattacccagttctacgcttttgttgaagaaaggcagaaagtccattgt 328 ||| | ||||||||||| || | ||| ||||| || |||||||| |||||||| || ||| Sbjct: 18722483 acactaaagggaattacacaatactatgctttcgtggaagaaagacagaaagttcactgt 18722424 Query: 329 ctgaacactctttt 342 ||||| || ||||| Sbjct: 18722423 ctgaatacactttt 18722410
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 95.6 bits (48), Expect = 1e-16 Identities = 132/160 (82%) Strand = Plus / Minus Query: 371 atattctgtaactccgtaaatcgtgttgaactactggcgaagaagatcacagagcttggt 430 |||||||||||||| || || | ||||| |||||||| ||||| ||||| |||||||| Sbjct: 18733148 atattctgtaactctgttaacagagttgagctactggctaagaaaatcaccgagcttggc 18733089 Query: 431 tactcttgcttctacatccatgctaaaatgctgcaggatcatcgtaatagagtattccat 490 || || ||||||||||| ||||| |||||| |||| || ||||| || |||| || ||| Sbjct: 18733088 tattcatgcttctacattcatgcaaaaatgttgcaagaccatcgaaaccgagtgtttcat 18733029 Query: 491 gatttccgtaatggcgcatgcaggaaccttgtgtgtacag 530 ||||| || ||||| || ||||| ||||||||||| |||| Sbjct: 18733028 gattttcgcaatggtgcttgcagaaaccttgtgtgcacag 18732989 Score = 75.8 bits (38), Expect = 1e-10 Identities = 110/134 (82%) Strand = Plus / Minus Query: 209 aaggctttcaaggacaaatatctgcctaaaccctatgttattaatcttatggacgaactt 268 |||| |||||| || ||||| || |||| || |||||||||||||| ||||| ||||| Sbjct: 18733396 aaggatttcaaagagaaatacctacctaggccttatgttattaatctcatggatgaacta 18733337 Query: 269 acattgaagggaattacccagttctacgcttttgttgaagaaaggcagaaagtccattgt 328 ||| | ||||||||||| || | ||| ||||| || |||||||| |||||||| || ||| Sbjct: 18733336 acactaaagggaattacacaatactatgctttcgtggaagaaagacagaaagttcactgt 18733277 Query: 329 ctgaacactctttt 342 ||||| || ||||| Sbjct: 18733276 ctgaatacactttt 18733263
>emb|AL161472.2|ATCHRIV2 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 2 Length = 197975 Score = 89.7 bits (45), Expect = 9e-15 Identities = 147/181 (81%) Strand = Plus / Plus Query: 348 agctgcaaattaatcaatctataatattctgtaactccgtaaatcgtgttgaactactgg 407 ||||||||||||| ||||| || |||||||| || || ||||||||||| || || | | Sbjct: 83340 agctgcaaattaaccaatcaatcatattctgcaattctgtaaatcgtgtggagctcttag 83399 Query: 408 cgaagaagatcacagagcttggttactcttgcttctacatccatgctaaaatgctgcagg 467 | ||||| |||||||| ||||| || || ||||| ||||||||||| || ||||| || | Sbjct: 83400 ccaagaaaatcacagaacttgggtattcatgcttttacatccatgcaaagatgcttcaag 83459 Query: 468 atcatcgtaatagagtattccatgatttccgtaatggcgcatgcaggaaccttgtgtgta 527 | || || || ||||| |||||||| ||||| ||||| |||||| | || || ||||||| Sbjct: 83460 accaccgaaacagagtgttccatgacttccggaatggtgcatgccgtaatctcgtgtgta 83519 Query: 528 c 528 | Sbjct: 83520 c 83520 Score = 79.8 bits (40), Expect = 9e-12 Identities = 178/224 (79%) Strand = Plus / Plus Query: 96 aggcagacaagcttctttctcccgagttccaaccttctgtggagcagttaattcgatacc 155 |||| ||||||||| | |||| |||||||||||||| ||||| || || ||| | | | Sbjct: 83015 aggctgacaagcttttgtctcaagagttccaaccttcagtggaacatttgattagctttc 83074 Query: 156 ttccatcgagtcgacagattctaatgttctctgcaacattcccggtcactgtcaaggctt 215 ||||| ||||| |||||| | |||||||| || || ||||| ||||||||||||| || Sbjct: 83075 ttccagaaagtcgtcagattttgatgttctcagccaccttccctgtcactgtcaaggatt 83134 Query: 216 tcaaggacaaatatctgcctaaaccctatgttattaatcttatggacgaacttacattga 275 | ||||| | | |||| | || || || || || ||||| ||||| |||||||| | | Sbjct: 83135 ttaaggataggtttctgacgaatccttacgtcatcaatctcatggatgaacttacgctca 83194 Query: 276 agggaattacccagttctacgcttttgttgaagaaaggcagaaa 319 |||| |||||||| ||||| ||||| ||||||||||| |||||| Sbjct: 83195 agggtattacccaattctatgctttcgttgaagaaagacagaaa 83238
>emb|AJ010459.1|ATH010459 Arabidopsis thaliana mRNA for DEAD box RNA helicase, RH6 Length = 896 Score = 89.7 bits (45), Expect = 9e-15 Identities = 150/185 (81%) Strand = Plus / Plus Query: 380 aactccgtaaatcgtgttgaactactggcgaagaagatcacagagcttggttactcttgc 439 ||||| || ||||||||||| || |||| ||||| || ||||| ||||||||||| ||| Sbjct: 47 aactctgttaatcgtgttgagctgttggccaagaaaattacagaacttggttactcatgc 106 Query: 440 ttctacatccatgctaaaatgctgcaggatcatcgtaatagagtattccatgatttccgt 499 ||||| |||||||| || ||| | || || ||||| || || || |||||||||||||| Sbjct: 107 ttctatatccatgcaaagatggttcaagaccatcggaacagggttttccatgatttccgc 166 Query: 500 aatggcgcatgcaggaaccttgtgtgtacagatctttttacaaggggaatagatattcaa 559 ||||| |||||||| || ||||| || || ||| | |||||| | || || || |||||| Sbjct: 167 aatggtgcatgcagaaatcttgtttgcactgatttgtttacacgtgggattgacattcaa 226 Query: 560 gctgt 564 ||||| Sbjct: 227 gctgt 231
>gb|AF058919.2|F6N23 Arabidopsis thaliana BAC F6N23 Length = 91849 Score = 89.7 bits (45), Expect = 9e-15 Identities = 147/181 (81%) Strand = Plus / Plus Query: 348 agctgcaaattaatcaatctataatattctgtaactccgtaaatcgtgttgaactactgg 407 ||||||||||||| ||||| || |||||||| || || ||||||||||| || || | | Sbjct: 64466 agctgcaaattaaccaatcaatcatattctgcaattctgtaaatcgtgtggagctcttag 64525 Query: 408 cgaagaagatcacagagcttggttactcttgcttctacatccatgctaaaatgctgcagg 467 | ||||| |||||||| ||||| || || ||||| ||||||||||| || ||||| || | Sbjct: 64526 ccaagaaaatcacagaacttgggtattcatgcttttacatccatgcaaagatgcttcaag 64585 Query: 468 atcatcgtaatagagtattccatgatttccgtaatggcgcatgcaggaaccttgtgtgta 527 | || || || ||||| |||||||| ||||| ||||| |||||| | || || ||||||| Sbjct: 64586 accaccgaaacagagtgttccatgacttccggaatggtgcatgccgtaatctcgtgtgta 64645 Query: 528 c 528 | Sbjct: 64646 c 64646 Score = 79.8 bits (40), Expect = 9e-12 Identities = 178/224 (79%) Strand = Plus / Plus Query: 96 aggcagacaagcttctttctcccgagttccaaccttctgtggagcagttaattcgatacc 155 |||| ||||||||| | |||| |||||||||||||| ||||| || || ||| | | | Sbjct: 64141 aggctgacaagcttttgtctcaagagttccaaccttcagtggaacatttgattagctttc 64200 Query: 156 ttccatcgagtcgacagattctaatgttctctgcaacattcccggtcactgtcaaggctt 215 ||||| ||||| |||||| | |||||||| || || ||||| ||||||||||||| || Sbjct: 64201 ttccagaaagtcgtcagattttgatgttctcagccaccttccctgtcactgtcaaggatt 64260 Query: 216 tcaaggacaaatatctgcctaaaccctatgttattaatcttatggacgaacttacattga 275 | ||||| | | |||| | || || || || || ||||| ||||| |||||||| | | Sbjct: 64261 ttaaggataggtttctgacgaatccttacgtcatcaatctcatggatgaacttacgctca 64320 Query: 276 agggaattacccagttctacgcttttgttgaagaaaggcagaaa 319 |||| |||||||| ||||| ||||| ||||||||||| |||||| Sbjct: 64321 agggtattacccaattctatgctttcgttgaagaaagacagaaa 64364
>gb|AC004665.3| Arabidopsis thaliana chromosome 2 clone F4I18 map CIC02E07, complete sequence Length = 101647 Score = 85.7 bits (43), Expect = 1e-13 Identities = 118/143 (82%) Strand = Plus / Minus Query: 380 aactccgtaaatcgtgttgaactactggcgaagaagatcacagagcttggttactcttgc 439 ||||| || ||||||||||| || |||| ||||| || ||||| ||||||||||| ||| Sbjct: 65251 aactctgttaatcgtgttgagctgttggccaagaaaattacagaacttggttactcatgc 65192 Query: 440 ttctacatccatgctaaaatgctgcaggatcatcgtaatagagtattccatgatttccgt 499 ||||| |||||||| || ||| | || || ||||| || || || |||||||||||||| Sbjct: 65191 ttctatatccatgcaaagatggttcaagaccatcggaacagggttttccatgatttccgc 65132 Query: 500 aatggcgcatgcaggaaccttgt 522 ||||| |||||||| || ||||| Sbjct: 65131 aatggtgcatgcagaaatcttgt 65109
>gb|AC123899.15| Medicago truncatula clone mth2-33n6, complete sequence Length = 127126 Score = 81.8 bits (41), Expect = 2e-12 Identities = 137/169 (81%) Strand = Plus / Plus Query: 348 agctgcaaattaatcaatctataatattctgtaactccgtaaatcgtgttgaactactgg 407 |||||||||| || ||||| || || ||||| || || || ||||| |||||||| || | Sbjct: 35090 agctgcaaataaaccaatccatcatcttctgcaattcggtgaatcgagttgaactccttg 35149 Query: 408 cgaagaagatcacagagcttggttactcttgcttctacatccatgctaaaatgctgcagg 467 | ||||| |||||||| || || || || || ||||| || ||||| || ||| |||| | Sbjct: 35150 ctaagaaaatcacagaactagggtattcatgtttctatatacatgcaaagatgttgcaag 35209 Query: 468 atcatcgtaatagagtattccatgatttccgtaatggcgcatgcaggaa 516 | || ||||||||||| |||||||| ||||| ||||| ||||||||||| Sbjct: 35210 accaccgtaatagagttttccatgacttccgcaatggtgcatgcaggaa 35258 Score = 73.8 bits (37), Expect = 5e-10 Identities = 136/169 (80%) Strand = Plus / Plus Query: 348 agctgcaaattaatcaatctataatattctgtaactccgtaaatcgtgttgaactactgg 407 |||||||||| || ||||| || || ||||| || || |||||||| |||||||| || | Sbjct: 48306 agctgcaaataaaccaatccatcatcttctgcaattcggtaaatcgagttgaactccttg 48365 Query: 408 cgaagaagatcacagagcttggttactcttgcttctacatccatgctaaaatgctgcagg 467 | ||||| ||||| || || || || || || ||||| || ||||| || ||| |||| | Sbjct: 48366 ctaagaaaatcactgaactagggtattcatgtttctatattcatgcaaagatgttgcaag 48425 Query: 468 atcatcgtaatagagtattccatgatttccgtaatggcgcatgcaggaa 516 | || ||||||||||| ||||| || ||||| ||||| ||||||||||| Sbjct: 48426 accaccgtaatagagttttccacgacttccgcaatggtgcatgcaggaa 48474 Score = 73.8 bits (37), Expect = 5e-10 Identities = 136/169 (80%) Strand = Plus / Plus Query: 348 agctgcaaattaatcaatctataatattctgtaactccgtaaatcgtgttgaactactgg 407 |||||||||| || ||||| || || ||||| || || || ||||| |||||||| || | Sbjct: 25364 agctgcaaataaaccaatccatcatcttctgcaattcggtgaatcgagttgaactccttg 25423 Query: 408 cgaagaagatcacagagcttggttactcttgcttctacatccatgctaaaatgctgcagg 467 | ||||| |||||||| || || || || || ||||| || ||||| || ||| |||| | Sbjct: 25424 ctaagaaaatcacagaactagggtattcatgtttctatatacatgcaaagatgttgcaag 25483 Query: 468 atcatcgtaatagagtattccatgatttccgtaatggcgcatgcaggaa 516 | || ||||||||||| ||||| || ||||| ||||| ||||||||||| Sbjct: 25484 accaccgtaatagagttttccacgacttccgcaatggtgcatgcaggaa 25532 Score = 60.0 bits (30), Expect = 8e-06 Identities = 135/170 (79%) Strand = Plus / Plus Query: 176 ctaatgttctctgcaacattcccggtcactgtcaaggctttcaaggacaaatatctgcct 235 |||||||| || || ||||| || || ||||| |||| ||||| || | |||||| | | Sbjct: 25109 ctaatgttttcagctacatttcctgttactgtaaaggacttcaaagatagatatcttcgt 25168 Query: 236 aaaccctatgttattaatcttatggacgaacttacattgaagggaattacccagttctac 295 ||||| ||| | ||||| |||||||| || ||||| ||||||| ||||| || || || Sbjct: 25169 aaaccgtatatcattaaccttatggatgagcttactctgaagggtattacacaattttat 25228 Query: 296 gcttttgttgaagaaaggcagaaagtccattgtctgaacactcttttttc 345 || ||||| || || |||||||||||||| || || || ||||||||||| Sbjct: 25229 gcatttgtggaggagaggcagaaagtccactgcctaaatactcttttttc 25278 Score = 54.0 bits (27), Expect = 5e-04 Identities = 123/155 (79%) Strand = Plus / Plus Query: 191 acattcccggtcactgtcaaggctttcaaggacaaatatctgcctaaaccctatgttatt 250 ||||| || |||||||| |||| ||||| || | |||||| | ||| || ||| | ||| Sbjct: 34850 acatttcctgtcactgtaaaggacttcaacgatagatatcttcgtaagccgtatatcatt 34909 Query: 251 aatcttatggacgaacttacattgaagggaattacccagttctacgcttttgttgaagaa 310 || |||||||| || ||||| ||||||| ||||| || || || || ||||| || || Sbjct: 34910 aaccttatggatgagcttactctgaagggtattacacaattttatgcatttgtggaggag 34969 Query: 311 aggcagaaagtccattgtctgaacactcttttttc 345 |||||||||||||| || || || ||||||||||| Sbjct: 34970 aggcagaaagtccactgcctaaatactcttttttc 35004 Score = 44.1 bits (22), Expect = 0.49 Identities = 79/98 (80%) Strand = Plus / Plus Query: 248 attaatcttatggacgaacttacattgaagggaattacccagttctacgcttttgttgaa 307 ||||| |||||||| || || || ||||||| ||||| || || || || ||||| || Sbjct: 48123 attaaccttatggatgagctaaccctgaagggtattacacaattttatgcatttgtggag 48182 Query: 308 gaaaggcagaaagtccattgtctgaacactcttttttc 345 || |||||||||||||| || || || ||||||||||| Sbjct: 48183 gagaggcagaaagtccactgcctaaatactcttttttc 48220
>ref|XM_447399.1| Candida glabrata CBS138 hypothetical protein (CAGL0I03476g) partial mRNA Length = 1524 Score = 75.8 bits (38), Expect = 1e-10 Identities = 92/110 (83%) Strand = Plus / Plus Query: 275 aagggaattacccagttctacgcttttgttgaagaaaggcagaaagtccattgtctgaac 334 ||||| ||||| |||| |||||| ||||| |||||||| || ||| | || ||||||||| Sbjct: 721 aagggtattacgcagtactacgcctttgtagaagaaagacaaaaacttcactgtctgaac 780 Query: 335 actcttttttccaagctgcaaattaatcaatctataatattctgtaactc 384 || || || || ||||| |||||||||||| |||| || ||||||||||| Sbjct: 781 accctattctctaagcttcaaattaatcaagctatcatcttctgtaactc 830
>ref|XM_855338.1| PREDICTED: Canis familiaris similar to Probable ATP-dependent RNA helicase DDX6 (DEAD-box protein 6) (ATP-dependent RNA helicase p54) (Oncogene RCK), transcript variant 4 (LOC479414), mRNA Length = 2591 Score = 75.8 bits (38), Expect = 1e-10 Identities = 68/78 (87%) Strand = Plus / Plus Query: 428 ggttactcttgcttctacatccatgctaaaatgctgcaggatcatcgtaatagagtattc 487 ||||| ||||||||||| ||||||||||||||| |||||| ||||| ||| | ||||| Sbjct: 1469 ggttattcttgcttctatatccatgctaaaatgaggcaggaacatcgaaatcgtgtattt 1528 Query: 488 catgatttccgtaatggc 505 ||||||||||| |||||| Sbjct: 1529 catgatttccgaaatggc 1546
>ref|XM_855302.1| PREDICTED: Canis familiaris similar to Probable ATP-dependent RNA helicase DDX6 (DEAD-box protein 6) (ATP-dependent RNA helicase p54) (Oncogene RCK), transcript variant 3 (LOC479414), mRNA Length = 2435 Score = 75.8 bits (38), Expect = 1e-10 Identities = 68/78 (87%) Strand = Plus / Plus Query: 428 ggttactcttgcttctacatccatgctaaaatgctgcaggatcatcgtaatagagtattc 487 ||||| ||||||||||| ||||||||||||||| |||||| ||||| ||| | ||||| Sbjct: 1313 ggttattcttgcttctatatccatgctaaaatgaggcaggaacatcgaaatcgtgtattt 1372 Query: 488 catgatttccgtaatggc 505 ||||||||||| |||||| Sbjct: 1373 catgatttccgaaatggc 1390
>ref|XM_536551.2| PREDICTED: Canis familiaris similar to Probable ATP-dependent RNA helicase DDX6 (DEAD-box protein 6) (ATP-dependent RNA helicase p54) (Oncogene RCK), transcript variant 1 (LOC479414), mRNA Length = 2595 Score = 75.8 bits (38), Expect = 1e-10 Identities = 68/78 (87%) Strand = Plus / Plus Query: 428 ggttactcttgcttctacatccatgctaaaatgctgcaggatcatcgtaatagagtattc 487 ||||| ||||||||||| ||||||||||||||| |||||| ||||| ||| | ||||| Sbjct: 1423 ggttattcttgcttctatatccatgctaaaatgaggcaggaacatcgaaatcgtgtattt 1482 Query: 488 catgatttccgtaatggc 505 ||||||||||| |||||| Sbjct: 1483 catgatttccgaaatggc 1500
>ref|XM_844882.1| PREDICTED: Canis familiaris similar to Probable ATP-dependent RNA helicase DDX6 (DEAD-box protein 6) (ATP-dependent RNA helicase p54) (Oncogene RCK), transcript variant 2 (LOC479414), mRNA Length = 4272 Score = 75.8 bits (38), Expect = 1e-10 Identities = 68/78 (87%) Strand = Plus / Plus Query: 428 ggttactcttgcttctacatccatgctaaaatgctgcaggatcatcgtaatagagtattc 487 ||||| ||||||||||| ||||||||||||||| |||||| ||||| ||| | ||||| Sbjct: 1448 ggttattcttgcttctatatccatgctaaaatgaggcaggaacatcgaaatcgtgtattt 1507 Query: 488 catgatttccgtaatggc 505 ||||||||||| |||||| Sbjct: 1508 catgatttccgaaatggc 1525
>ref|XM_845399.1| PREDICTED: Canis familiaris similar to Probable ATP-dependent RNA helicase DDX6 (DEAD-box protein 6) (ATP-dependent RNA helicase p54) (Oncogene RCK), transcript variant 1 (LOC479071), mRNA Length = 2525 Score = 75.8 bits (38), Expect = 1e-10 Identities = 68/78 (87%) Strand = Plus / Plus Query: 428 ggttactcttgcttctacatccatgctaaaatgctgcaggatcatcgtaatagagtattc 487 ||||| ||||||||||| ||||||||||||||| |||||| ||||| ||| | ||||| Sbjct: 1393 ggttattcttgcttctatatccatgctaaaatgaggcaggaacatcgaaatcgtgtattt 1452 Query: 488 catgatttccgtaatggc 505 ||||||||||| |||||| Sbjct: 1453 catgatttccgaaatggc 1470
>ref|XM_856433.1| PREDICTED: Canis familiaris similar to Probable ATP-dependent RNA helicase DDX6 (DEAD-box protein 6) (ATP-dependent RNA helicase p54) (Oncogene RCK), transcript variant 2 (LOC479071), mRNA Length = 2377 Score = 75.8 bits (38), Expect = 1e-10 Identities = 68/78 (87%) Strand = Plus / Plus Query: 428 ggttactcttgcttctacatccatgctaaaatgctgcaggatcatcgtaatagagtattc 487 ||||| ||||||||||| ||||||||||||||| |||||| ||||| ||| | ||||| Sbjct: 1258 ggttattcttgcttctatatccatgctaaaatgaggcaggaacatcgaaatcgtgtattt 1317 Query: 488 catgatttccgtaatggc 505 ||||||||||| |||||| Sbjct: 1318 catgatttccgaaatggc 1335
>emb|CR380955.1| Candida glabrata strain CBS138 chromosome I complete sequence Length = 1089401 Score = 75.8 bits (38), Expect = 1e-10 Identities = 92/110 (83%) Strand = Plus / Minus Query: 275 aagggaattacccagttctacgcttttgttgaagaaaggcagaaagtccattgtctgaac 334 ||||| ||||| |||| |||||| ||||| |||||||| || ||| | || ||||||||| Sbjct: 295652 aagggtattacgcagtactacgcctttgtagaagaaagacaaaaacttcactgtctgaac 295593 Query: 335 actcttttttccaagctgcaaattaatcaatctataatattctgtaactc 384 || || || || ||||| |||||||||||| |||| || ||||||||||| Sbjct: 295592 accctattctctaagcttcaaattaatcaagctatcatcttctgtaactc 295543
>emb|AL137898.1|ATT20K12 Arabidopsis thaliana DNA chromosome 3, BAC clone T20K12 Length = 109155 Score = 73.8 bits (37), Expect = 5e-10 Identities = 136/169 (80%) Strand = Plus / Plus Query: 348 agctgcaaattaatcaatctataatattctgtaactccgtaaatcgtgttgaactactgg 407 |||||||||| |||||||| ||||| || || ||||| || ||||| || || || ||| Sbjct: 56614 agctgcaaataaatcaatcgataatcttttgcaactctgtcaatcgcgtggagctgttgg 56673 Query: 408 cgaagaagatcacagagcttggttactcttgcttctacatccatgctaaaatgctgcagg 467 | ||||| |||||||| |||||||| || ||||||||||| ||||| || ||| | || | Sbjct: 56674 ctaagaaaatcacagaacttggttattcatgcttctacattcatgcaaagatggttcaag 56733 Query: 468 atcatcgtaatagagtattccatgatttccgtaatggcgcatgcaggaa 516 | || | || ||||||||||| || ||||| ||||| || |||||||| Sbjct: 56734 accacaggaacagagtattccacgagttccgcaatggtgcttgcaggaa 56782
>ref|XM_236192.2| PREDICTED: Rattus norvegicus DEAD (Asp-Glu-Ala-Asp) box polypeptide 6 (Ddx6), mRNA Length = 1452 Score = 71.9 bits (36), Expect = 2e-09 Identities = 87/104 (83%) Strand = Plus / Plus Query: 402 tactggcgaagaagatcacagagcttggttactcttgcttctacatccatgctaaaatgc 461 ||||||| |||||||| | |||| ||||||||||||||||| ||||||||||||||| Sbjct: 1046 tactggccaagaagatttctcagctgggttactcttgcttctatatccatgctaaaatga 1105 Query: 462 tgcaggatcatcgtaatagagtattccatgatttccgtaatggc 505 |||||| ||| | ||| | || || ||||||||||| |||||| Sbjct: 1106 ggcaggaacatagaaatcgtgtctttcatgatttccgaaatggc 1149
>ref|XM_576400.1| PREDICTED: Rattus norvegicus similar to RCK (LOC500988), mRNA Length = 3897 Score = 71.9 bits (36), Expect = 2e-09 Identities = 87/104 (83%) Strand = Plus / Plus Query: 402 tactggcgaagaagatcacagagcttggttactcttgcttctacatccatgctaaaatgc 461 ||||||| |||||||| | |||| ||||||||||||||||| ||||||||||||||| Sbjct: 1335 tactggccaagaagatttctcagctgggttactcttgcttctatatccatgctaaaatga 1394 Query: 462 tgcaggatcatcgtaatagagtattccatgatttccgtaatggc 505 |||||| ||| | ||| | || || ||||||||||| |||||| Sbjct: 1395 ggcaggaacatagaaatcgtgtctttcatgatttccgaaatggc 1438
>ref|XM_508798.1| PREDICTED: Pan troglodytes similar to probable RNA helicase (EC 3.6.1.-) RCK - human (LOC451594), mRNA Length = 1422 Score = 67.9 bits (34), Expect = 3e-08 Identities = 67/78 (85%) Strand = Plus / Plus Query: 428 ggttactcttgcttctacatccatgctaaaatgctgcaggatcatcgtaatagagtattc 487 ||||| ||||||||||| || |||||||||||| |||||| ||||| ||| | ||||| Sbjct: 1072 ggttattcttgcttctatattcatgctaaaatgaggcaggaacatcgaaatcgtgtattt 1131 Query: 488 catgatttccgtaatggc 505 ||||||||||| |||||| Sbjct: 1132 catgatttccgaaatggc 1149
>gb|BC065007.1| Homo sapiens DEAD (Asp-Glu-Ala-Asp) box polypeptide 6, mRNA (cDNA clone MGC:74611 IMAGE:6163439), complete cds Length = 2619 Score = 67.9 bits (34), Expect = 3e-08 Identities = 67/78 (85%) Strand = Plus / Plus Query: 428 ggttactcttgcttctacatccatgctaaaatgctgcaggatcatcgtaatagagtattc 487 ||||| ||||||||||| || |||||||||||| |||||| ||||| ||| | ||||| Sbjct: 1364 ggttattcttgcttctatattcatgctaaaatgaggcaggaacatcgaaatcgtgtattt 1423 Query: 488 catgatttccgtaatggc 505 ||||||||||| |||||| Sbjct: 1424 catgatttccgaaatggc 1441
>ref|XM_754383.1| Ustilago maydis 521 hypothetical protein (UM03329.1) partial mRNA Length = 1605 Score = 67.9 bits (34), Expect = 3e-08 Identities = 61/70 (87%) Strand = Plus / Plus Query: 282 ttacccagttctacgcttttgttgaagaaaggcagaaagtccattgtctgaacactcttt 341 |||| |||| ||| || ||||| |||||||| |||||||| ||||||||||||||||| | Sbjct: 1076 ttacacagtactatgcctttgtcgaagaaagacagaaagtgcattgtctgaacactctct 1135 Query: 342 tttccaagct 351 | |||||||| Sbjct: 1136 tctccaagct 1145
>ref|NM_004397.3| Homo sapiens DEAD (Asp-Glu-Ala-Asp) box polypeptide 6 (DDX6), mRNA Length = 4180 Score = 67.9 bits (34), Expect = 3e-08 Identities = 67/78 (85%) Strand = Plus / Plus Query: 428 ggttactcttgcttctacatccatgctaaaatgctgcaggatcatcgtaatagagtattc 487 ||||| ||||||||||| || |||||||||||| |||||| ||||| ||| | ||||| Sbjct: 1405 ggttattcttgcttctatattcatgctaaaatgaggcaggaacatcgaaatcgtgtattt 1464 Query: 488 catgatttccgtaatggc 505 ||||||||||| |||||| Sbjct: 1465 catgatttccgaaatggc 1482
>dbj|AK093657.1| Homo sapiens cDNA FLJ36338 fis, clone THYMU2006357, highly similar to PROBABLE ATP-DEPENDENT RNA HELICASE P54 Length = 1794 Score = 67.9 bits (34), Expect = 3e-08 Identities = 67/78 (85%) Strand = Plus / Plus Query: 428 ggttactcttgcttctacatccatgctaaaatgctgcaggatcatcgtaatagagtattc 487 ||||| ||||||||||| || |||||||||||| |||||| ||||| ||| | ||||| Sbjct: 675 ggttattcttgcttctatattcatgctaaaatgaggcaggaacatcgaaatcgtgtattt 734 Query: 488 catgatttccgtaatggc 505 ||||||||||| |||||| Sbjct: 735 catgatttccgaaatggc 752
>gb|AY109872.1| Zea mays CL3654_1 mRNA sequence Length = 687 Score = 67.9 bits (34), Expect = 3e-08 Identities = 67/78 (85%) Strand = Plus / Minus Query: 488 catgatttccgtaatggcgcatgcaggaaccttgtgtgtacagatctttttacaagggga 547 |||||||| |||||||| || ||||| ||||||||||| |||||||| ||||| || ||| Sbjct: 624 catgattttcgtaatggtgcttgcagaaaccttgtgtgcacagatctgtttaccagagga 565 Query: 548 atagatattcaagctgtt 565 || ||||| || |||||| Sbjct: 564 attgatatccaggctgtt 547
>dbj|D17532.1|HUMRCK Homo sapiens mRNA for RCK, complete cds Length = 4153 Score = 67.9 bits (34), Expect = 3e-08 Identities = 67/78 (85%) Strand = Plus / Plus Query: 428 ggttactcttgcttctacatccatgctaaaatgctgcaggatcatcgtaatagagtattc 487 ||||| ||||||||||| || |||||||||||| |||||| ||||| ||| | ||||| Sbjct: 1378 ggttattcttgcttctatattcatgctaaaatgaggcaggaacatcgaaatcgtgtattt 1437 Query: 488 catgatttccgtaatggc 505 ||||||||||| |||||| Sbjct: 1438 catgatttccgaaatggc 1455
>emb|Z11685.1|HSRNAHX H.sapiens mRNA for RNA helicase Length = 2489 Score = 67.9 bits (34), Expect = 3e-08 Identities = 67/78 (85%) Strand = Plus / Plus Query: 428 ggttactcttgcttctacatccatgctaaaatgctgcaggatcatcgtaatagagtattc 487 ||||| ||||||||||| || |||||||||||| |||||| ||||| ||| | ||||| Sbjct: 1405 ggttattcttgcttctatattcatgctaaaatgaggcaggaacatcgaaatcgtgtattt 1464 Query: 488 catgatttccgtaatggc 505 ||||||||||| |||||| Sbjct: 1465 catgatttccgaaatggc 1482
>gb|AY661864.1| Cryptococcus neoformans var. grubii virulence-associated DEAD Box protein (VAD1) mRNA, complete cds Length = 2453 Score = 65.9 bits (33), Expect = 1e-07 Identities = 117/145 (80%) Strand = Plus / Plus Query: 301 tgttgaagaaaggcagaaagtccattgtctgaacactcttttttccaagctgcaaattaa 360 |||||||||| |||||||||||||| || ||||| || || |||||||| |||||||| Sbjct: 900 tgttgaagaatctcagaaagtccattgcctcaacaccctcttctccaagctccaaattaa 959 Query: 361 tcaatctataatattctgtaactccgtaaatcgtgttgaactactggcgaagaagatcac 420 |||||||| || || |||||||| || ||||| || || || || |||||| |||| Sbjct: 960 ccaatctatcatcttttgtaactcgaccaaccgtgtcgagctcctcgccaagaaggtcac 1019 Query: 421 agagcttggttactcttgcttctac 445 || ||||| |||||||| |||||| Sbjct: 1020 tgaacttggctactcttgtttctac 1044 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 87 ttatggatgaggcagacaagcttct 111 |||||||||| |||||||||||||| Sbjct: 686 ttatggatgaagcagacaagcttct 710
>dbj|AK117082.1| Ciona intestinalis cDNA, clone:cits028g06, full insert sequence Length = 2554 Score = 65.9 bits (33), Expect = 1e-07 Identities = 135/169 (79%) Strand = Plus / Plus Query: 285 cccagttctacgcttttgttgaagaaaggcagaaagtccattgtctgaacactctttttt 344 ||||||| ||||| | |||||| |||| | ||||||| |||||||| ||||| || || | Sbjct: 982 cccagttttacgcctatgttgaggaaaagaagaaagtgcattgtctcaacacactgttct 1041 Query: 345 ccaagctgcaaattaatcaatctataatattctgtaactccgtaaatcgtgttgaactac 404 | |||||||| || || ||||| || || ||||| ||||| | || | || || || | Sbjct: 1042 caaagctgcagatcaaccaatcaattattttctgcaactcaacacatagagtcgagcttc 1101 Query: 405 tggcgaagaagatcacagagcttggttactcttgcttctacatccatgc 453 | ||||| ||||| |||||||| |||||||| ||||||||||| ||||| Sbjct: 1102 ttgcgaaaaagataacagagctcggttactcctgcttctacattcatgc 1150
>ref|XM_749965.1| Aspergillus fumigatus Af293 ATP dependent RNA helicase Dhh1 (Afu3g05430) partial mRNA Length = 1524 Score = 63.9 bits (32), Expect = 5e-07 Identities = 134/168 (79%) Strand = Plus / Plus Query: 278 ggaattacccagttctacgcttttgttgaagaaaggcagaaagtccattgtctgaacact 337 ||||| ||||| | |||||||||||| || |||| ||||| ||||| || |||||||| Sbjct: 772 ggaatcacccaatactacgcttttgtggaggaaaaacagaaggtccactgcctgaacacc 831 Query: 338 cttttttccaagctgcaaattaatcaatctataatattctgtaactccgtaaatcgtgtt 397 || || || ||||| ||||| || || || || || ||||| |||||| || || ||| Sbjct: 832 ctattctcaaagcttcaaataaaccagtcgatcattttctgcaactccaccaaccgagtt 891 Query: 398 gaactactggcgaagaagatcacagagcttggttactcttgcttctac 445 ||||| || |||||||| || |||||| | || ||||||||||||||| Sbjct: 892 gaacttcttgcgaagaaaattacagagttgggctactcttgcttctac 939
>ref|NM_007841.2| Mus musculus DEAD (Asp-Glu-Ala-Asp) box polypeptide 6 (Ddx6), mRNA Length = 2334 Score = 61.9 bits (31), Expect = 2e-06 Identities = 64/75 (85%) Strand = Plus / Plus Query: 431 tactcttgcttctacatccatgctaaaatgctgcaggatcatcgtaatagagtattccat 490 ||||||||||| || ||||||||||||||| |||||| ||||| ||| | || || ||| Sbjct: 1333 tactcttgcttttatatccatgctaaaatgaggcaggaacatcgaaatcgtgtctttcat 1392 Query: 491 gatttccgtaatggc 505 |||||||| |||||| Sbjct: 1393 gatttccgaaatggc 1407
>ref|NM_181324.2| Mus musculus DEAD (Asp-Glu-Ala-Asp) box polypeptide 6 (Ddx6), mRNA Length = 2061 Score = 61.9 bits (31), Expect = 2e-06 Identities = 64/75 (85%) Strand = Plus / Plus Query: 431 tactcttgcttctacatccatgctaaaatgctgcaggatcatcgtaatagagtattccat 490 ||||||||||| || ||||||||||||||| |||||| ||||| ||| | || || ||| Sbjct: 1400 tactcttgcttttatatccatgctaaaatgaggcaggaacatcgaaatcgtgtctttcat 1459 Query: 491 gatttccgtaatggc 505 |||||||| |||||| Sbjct: 1460 gatttccggaatggc 1474
>gb|BC021452.1| Mus musculus DEAD (Asp-Glu-Ala-Asp) box polypeptide 6, mRNA (cDNA clone MGC:29113 IMAGE:5043599), complete cds Length = 2389 Score = 61.9 bits (31), Expect = 2e-06 Identities = 64/75 (85%) Strand = Plus / Plus Query: 431 tactcttgcttctacatccatgctaaaatgctgcaggatcatcgtaatagagtattccat 490 ||||||||||| || ||||||||||||||| |||||| ||||| ||| | || || ||| Sbjct: 1298 tactcttgcttttatatccatgctaaaatgaggcaggaacatcgaaatcgtgtctttcat 1357 Query: 491 gatttccgtaatggc 505 |||||||| |||||| Sbjct: 1358 gatttccgaaatggc 1372
>ref|XR_002405.1| PREDICTED: Mus musculus similar to Probable ATP-dependent RNA helicase DDX6 (DEAD box protein 6) (ATP-dependent RNA helicase p54) (Oncogene RCK homolog) (LOC215253), mRNA Length = 1585 Score = 61.9 bits (31), Expect = 2e-06 Identities = 91/111 (81%) Strand = Plus / Plus Query: 395 gttgaactactggcgaagaagatcacagagcttggttactcttgcttctacatccatgct 454 |||||| ||||||| |||||||| | ||| |||||||||||||| || |||| |||| Sbjct: 1199 gttgaattactggccaagaagatttctccgctgggttactcttgcttttatatccgtgct 1258 Query: 455 aaaatgctgcaggatcatcgtaatagagtattccatgatttccgtaatggc 505 |||||| |||||| ||||| ||| | || || ||||||||||| |||||| Sbjct: 1259 aaaatgaggcaggaacatcgaaatcgtgtctttcatgatttccgaaatggc 1309
>dbj|AK148483.1| Mus musculus adult pancreas islet cells cDNA, RIKEN full-length enriched library, clone:C820008N02 product:DEAD (Asp-Glu-Ala-Asp) box polypeptide 6, full insert sequence Length = 3655 Score = 61.9 bits (31), Expect = 2e-06 Identities = 64/75 (85%) Strand = Plus / Plus Query: 431 tactcttgcttctacatccatgctaaaatgctgcaggatcatcgtaatagagtattccat 490 ||||||||||| || ||||||||||||||| |||||| ||||| ||| | || || ||| Sbjct: 1403 tactcttgcttttatatccatgctaaaatgaggcaggaacatcgaaatcgtgtctttcat 1462 Query: 491 gatttccgtaatggc 505 |||||||| |||||| Sbjct: 1463 gatttccgaaatggc 1477
>dbj|AK036648.1| Mus musculus adult male bone cDNA, RIKEN full-length enriched library, clone:9830145K21 product:DEAD (aspartate-glutamate-alanine-aspartate) box polypeptide 6, full insert sequence Length = 3502 Score = 61.9 bits (31), Expect = 2e-06 Identities = 64/75 (85%) Strand = Plus / Plus Query: 431 tactcttgcttctacatccatgctaaaatgctgcaggatcatcgtaatagagtattccat 490 ||||||||||| || ||||||||||||||| |||||| ||||| ||| | || || ||| Sbjct: 1434 tactcttgcttttatatccatgctaaaatgaggcaggaacatcgaaatcgtgtctttcat 1493 Query: 491 gatttccgtaatggc 505 |||||||| |||||| Sbjct: 1494 gatttccgaaatggc 1508
>dbj|AK054144.1| Mus musculus 2 days pregnant adult female oviduct cDNA, RIKEN full-length enriched library, clone:E230023J21 product:DEAD (aspartate-glutamate-alanine-aspartate) box polypeptide 6, full insert sequence Length = 2061 Score = 61.9 bits (31), Expect = 2e-06 Identities = 64/75 (85%) Strand = Plus / Plus Query: 431 tactcttgcttctacatccatgctaaaatgctgcaggatcatcgtaatagagtattccat 490 ||||||||||| || ||||||||||||||| |||||| ||||| ||| | || || ||| Sbjct: 1400 tactcttgcttttatatccatgctaaaatgaggcaggaacatcgaaatcgtgtctttcat 1459 Query: 491 gatttccgtaatggc 505 |||||||| |||||| Sbjct: 1460 gatttccggaatggc 1474
>dbj|D50494.1|MUSMRCK Mus musculus mRNA for RCK, complete cds Length = 2710 Score = 61.9 bits (31), Expect = 2e-06 Identities = 64/75 (85%) Strand = Plus / Plus Query: 431 tactcttgcttctacatccatgctaaaatgctgcaggatcatcgtaatagagtattccat 490 ||||||||||| || ||||||||||||||| |||||| ||||| ||| | || || ||| Sbjct: 1333 tactcttgcttttatatccatgctaaaatgaggcaggaacatcgaaatcgtgtctttcat 1392 Query: 491 gatttccgtaatggc 505 |||||||| |||||| Sbjct: 1393 gatttccgaaatggc 1407
>emb|AL732430.5| Mouse DNA sequence from clone RP23-176J12 on chromosome 2, complete sequence Length = 201610 Score = 61.9 bits (31), Expect = 2e-06 Identities = 91/111 (81%) Strand = Plus / Plus Query: 395 gttgaactactggcgaagaagatcacagagcttggttactcttgcttctacatccatgct 454 |||||| ||||||| |||||||| | ||| |||||||||||||| || |||| |||| Sbjct: 59931 gttgaattactggccaagaagatttctccgctgggttactcttgcttttatatccgtgct 59990 Query: 455 aaaatgctgcaggatcatcgtaatagagtattccatgatttccgtaatggc 505 |||||| |||||| ||||| ||| | || || ||||||||||| |||||| Sbjct: 59991 aaaatgaggcaggaacatcgaaatcgtgtctttcatgatttccgaaatggc 60041
>ref|XM_879462.1| PREDICTED: Bos taurus similar to Probable ATP-dependent RNA helicase DDX6 (DEAD-box protein 6) (ATP-dependent RNA helicase p54) (Oncogene RCK), transcript variant 7 (LOC513906), mRNA Length = 2499 Score = 60.0 bits (30), Expect = 8e-06 Identities = 66/78 (84%) Strand = Plus / Plus Query: 428 ggttactcttgcttctacatccatgctaaaatgctgcaggatcatcgtaatagagtattc 487 ||||| ||||||||||| ||||||||||||||| |||||| ||||| ||| | || || Sbjct: 1360 ggttattcttgcttctatatccatgctaaaatgaggcaggaacatcgaaatcgtgtgttt 1419 Query: 488 catgatttccgtaatggc 505 |||||||| || |||||| Sbjct: 1420 catgattttcgaaatggc 1437
>ref|XM_879431.1| PREDICTED: Bos taurus similar to Probable ATP-dependent RNA helicase DDX6 (DEAD-box protein 6) (ATP-dependent RNA helicase p54) (Oncogene RCK), transcript variant 6 (LOC513906), mRNA Length = 2193 Score = 60.0 bits (30), Expect = 8e-06 Identities = 66/78 (84%) Strand = Plus / Plus Query: 428 ggttactcttgcttctacatccatgctaaaatgctgcaggatcatcgtaatagagtattc 487 ||||| ||||||||||| ||||||||||||||| |||||| ||||| ||| | || || Sbjct: 1452 ggttattcttgcttctatatccatgctaaaatgaggcaggaacatcgaaatcgtgtgttt 1511 Query: 488 catgatttccgtaatggc 505 |||||||| || |||||| Sbjct: 1512 catgattttcgaaatggc 1529
>ref|XM_879407.1| PREDICTED: Bos taurus similar to Probable ATP-dependent RNA helicase DDX6 (DEAD-box protein 6) (ATP-dependent RNA helicase p54) (Oncogene RCK), transcript variant 5 (LOC513906), mRNA Length = 2180 Score = 60.0 bits (30), Expect = 8e-06 Identities = 66/78 (84%) Strand = Plus / Plus Query: 428 ggttactcttgcttctacatccatgctaaaatgctgcaggatcatcgtaatagagtattc 487 ||||| ||||||||||| ||||||||||||||| |||||| ||||| ||| | || || Sbjct: 1439 ggttattcttgcttctatatccatgctaaaatgaggcaggaacatcgaaatcgtgtgttt 1498 Query: 488 catgatttccgtaatggc 505 |||||||| || |||||| Sbjct: 1499 catgattttcgaaatggc 1516
>ref|XM_879382.1| PREDICTED: Bos taurus similar to Probable ATP-dependent RNA helicase DDX6 (DEAD-box protein 6) (ATP-dependent RNA helicase p54) (Oncogene RCK), transcript variant 4 (LOC513906), mRNA Length = 2237 Score = 60.0 bits (30), Expect = 8e-06 Identities = 66/78 (84%) Strand = Plus / Plus Query: 428 ggttactcttgcttctacatccatgctaaaatgctgcaggatcatcgtaatagagtattc 487 ||||| ||||||||||| ||||||||||||||| |||||| ||||| ||| | || || Sbjct: 1496 ggttattcttgcttctatatccatgctaaaatgaggcaggaacatcgaaatcgtgtgttt 1555 Query: 488 catgatttccgtaatggc 505 |||||||| || |||||| Sbjct: 1556 catgattttcgaaatggc 1573
>ref|XM_879353.1| PREDICTED: Bos taurus similar to Probable ATP-dependent RNA helicase DDX6 (DEAD-box protein 6) (ATP-dependent RNA helicase p54) (Oncogene RCK), transcript variant 3 (LOC513906), mRNA Length = 2030 Score = 60.0 bits (30), Expect = 8e-06 Identities = 66/78 (84%) Strand = Plus / Plus Query: 428 ggttactcttgcttctacatccatgctaaaatgctgcaggatcatcgtaatagagtattc 487 ||||| ||||||||||| ||||||||||||||| |||||| ||||| ||| | || || Sbjct: 1289 ggttattcttgcttctatatccatgctaaaatgaggcaggaacatcgaaatcgtgtgttt 1348 Query: 488 catgatttccgtaatggc 505 |||||||| || |||||| Sbjct: 1349 catgattttcgaaatggc 1366
>ref|XM_879318.1| PREDICTED: Bos taurus similar to Probable ATP-dependent RNA helicase DDX6 (DEAD-box protein 6) (ATP-dependent RNA helicase p54) (Oncogene RCK), transcript variant 2 (LOC513906), mRNA Length = 2160 Score = 60.0 bits (30), Expect = 8e-06 Identities = 66/78 (84%) Strand = Plus / Plus Query: 428 ggttactcttgcttctacatccatgctaaaatgctgcaggatcatcgtaatagagtattc 487 ||||| ||||||||||| ||||||||||||||| |||||| ||||| ||| | || || Sbjct: 1419 ggttattcttgcttctatatccatgctaaaatgaggcaggaacatcgaaatcgtgtgttt 1478 Query: 488 catgatttccgtaatggc 505 |||||||| || |||||| Sbjct: 1479 catgattttcgaaatggc 1496
>ref|XM_591668.2| PREDICTED: Bos taurus similar to Probable ATP-dependent RNA helicase DDX6 (DEAD-box protein 6) (ATP-dependent RNA helicase p54) (Oncogene RCK), transcript variant 1 (LOC513906), mRNA Length = 4276 Score = 60.0 bits (30), Expect = 8e-06 Identities = 66/78 (84%) Strand = Plus / Plus Query: 428 ggttactcttgcttctacatccatgctaaaatgctgcaggatcatcgtaatagagtattc 487 ||||| ||||||||||| ||||||||||||||| |||||| ||||| ||| | || || Sbjct: 1424 ggttattcttgcttctatatccatgctaaaatgaggcaggaacatcgaaatcgtgtgttt 1483 Query: 488 catgatttccgtaatggc 505 |||||||| || |||||| Sbjct: 1484 catgattttcgaaatggc 1501
>emb|BX088568.4| Human DNA sequence from clone XX-751M15 on chromosome 13 Contains a DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 6 (RNA helicase, 54kDa) (DDX6) pseudogene, complete sequence Length = 34808 Score = 60.0 bits (30), Expect = 8e-06 Identities = 66/78 (84%) Strand = Plus / Plus Query: 428 ggttactcttgcttctacatccatgctaaaatgctgcaggatcatcgtaatagagtattc 487 ||||| ||||||||||| || |||||||||||| |||||| |||| ||| | ||||| Sbjct: 18821 ggttattcttgcttctatattcatgctaaaatgaggcaggaacatcaaaatcgtgtattt 18880 Query: 488 catgatttccgtaatggc 505 ||||||||||| |||||| Sbjct: 18881 catgatttccgaaatggc 18898
>emb|CR857097.1| Pongo pygmaeus mRNA; cDNA DKFZp469I1738 (from clone DKFZp469I1738) Length = 2090 Score = 60.0 bits (30), Expect = 8e-06 Identities = 66/78 (84%) Strand = Plus / Plus Query: 428 ggttactcttgcttctacatccatgctaaaatgctgcaggatcatcgtaatagagtattc 487 ||||| ||||||||||| || |||||||| ||| |||||| ||||| ||| | ||||| Sbjct: 1421 ggttattcttgcttctatattcatgctaagatgaggcaggaacatcgaaatcgtgtattt 1480 Query: 488 catgatttccgtaatggc 505 ||||||||||| |||||| Sbjct: 1481 catgatttccgaaatggc 1498
>emb|AJ720165.1| Gallus gallus mRNA for hypothetical protein, clone 11n24 Length = 2544 Score = 58.0 bits (29), Expect = 3e-05 Identities = 59/69 (85%) Strand = Plus / Plus Query: 437 tgcttctacatccatgctaaaatgctgcaggatcatcgtaatagagtattccatgatttc 496 |||||||| ||||||||||||||| |||||| ||||| || | || |||||||||||| Sbjct: 1457 tgcttctatatccatgctaaaatgaggcaggagcatcgcaaccgcgtgttccatgatttc 1516 Query: 497 cgtaatggc 505 || |||||| Sbjct: 1517 cgaaatggc 1525
>ref|XM_679831.1| PREDICTED: Danio rerio similar to Probable ATP-dependent RNA helicase p54 (Oncogene RCK) (DEAD-box protein 6), transcript variant 1 (LOC564633), mRNA Length = 1754 Score = 54.0 bits (27), Expect = 5e-04 Identities = 60/71 (84%) Strand = Plus / Plus Query: 308 gaaaggcagaaagtccattgtctgaacactcttttttccaagctgcaaattaatcaatct 367 |||||||||||||||||||| || || ||||| || || | ||| ||||| ||||| ||| Sbjct: 1104 gaaaggcagaaagtccattgccttaatactctattctctaggctccaaatcaatcagtct 1163 Query: 368 ataatattctg 378 ||||| ||||| Sbjct: 1164 ataatcttctg 1174
>ref|XM_629936.1| Dictyostelium discoideum hypothetical protein (DDB0184074), partial mRNA Length = 1272 Score = 52.0 bits (26), Expect = 0.002 Identities = 134/170 (78%) Strand = Plus / Plus Query: 323 cattgtctgaacactcttttttccaagctgcaaattaatcaatctataatattctgtaac 382 |||||||| || ||||| || || ||| | ||||| |||||||| || || || |||||| Sbjct: 823 cattgtctcaatactctcttctcaaagttacaaatcaatcaatccatcatcttttgtaac 882 Query: 383 tccgtaaatcgtgttgaactactggcgaagaagatcacagagcttggttactcttgcttc 442 || || |||||||| || || |||| ||||| ||||| || || |||||| ||| ||| Sbjct: 883 tctgtcaatcgtgtagagttattggcaaagaaaatcactgaactcggttacagttgtttc 942 Query: 443 tacatccatgctaaaatgctgcaggatcatcgtaatagagtattccatga 492 | || |||||||||||| | || | |||||||||| | || |||||||| Sbjct: 943 tttattcatgctaaaatggttcaagctcatcgtaatcgtgttttccatga 992
>ref|XM_713695.1| Candida albicans SC5314 RNA helicase (CaO19_6197), mRNA Length = 1650 Score = 52.0 bits (26), Expect = 0.002 Identities = 56/66 (84%) Strand = Plus / Plus Query: 272 ttgaagggaattacccagttctacgcttttgttgaagaaaggcagaaagtccattgtctg 331 |||||||| ||| |||| ||||| ||||||||||| |||| ||||||| | |||||| | Sbjct: 715 ttgaagggtatttcccaattctatgcttttgttgaggaaaagcagaaattacattgttta 774 Query: 332 aacact 337 |||||| Sbjct: 775 aacact 780
>ref|XM_713611.1| Candida albicans SC5314 RNA helicase (CaO19_13577), mRNA Length = 1650 Score = 52.0 bits (26), Expect = 0.002 Identities = 56/66 (84%) Strand = Plus / Plus Query: 272 ttgaagggaattacccagttctacgcttttgttgaagaaaggcagaaagtccattgtctg 331 |||||||| ||| |||| ||||| ||||||||||| |||| ||||||| | |||||| | Sbjct: 715 ttgaagggtatttcccaattctatgcttttgttgaggaaaagcagaaattacattgttta 774 Query: 332 aacact 337 |||||| Sbjct: 775 aacact 780
>gb|AF038995.1|AF038995 Mus musculus putative RNA helicase RCK mRNA, partial cds Length = 1360 Score = 52.0 bits (26), Expect = 0.002 Identities = 56/66 (84%) Strand = Plus / Plus Query: 431 tactcttgcttctacatccatgctaaaatgctgcaggatcatcgtaatagagtattccat 490 ||||||||||| || ||||||||||||||| |||||| ||||| ||| | || || ||| Sbjct: 1000 tactcttgcttttatatccatgctaaaatgaggcaggaacatcgaaatcgtgtctttcat 1059 Query: 491 gatttc 496 |||||| Sbjct: 1060 gatttc 1065
>dbj|AB013609.1| Cavia porcellus mRNA for DEAD box protein, complete cds Length = 1540 Score = 52.0 bits (26), Expect = 0.002 Identities = 65/78 (83%) Strand = Plus / Plus Query: 428 ggttactcttgcttctacatccatgctaaaatgctgcaggatcatcgtaatagagtattc 487 ||||| ||||||||||| || || ||||||||| |||||| ||||| ||| | || || Sbjct: 1039 ggttattcttgcttctatattcacgctaaaatgaggcaggagcatcgaaatcgtgtgttt 1098 Query: 488 catgatttccgtaatggc 505 ||||||||||| |||||| Sbjct: 1099 catgatttccgaaatggc 1116
>ref|XM_417921.1| PREDICTED: Gallus gallus similar to probable RNA helicase (EC 3.6.1.-) RCK - human (LOC419783), mRNA Length = 3367 Score = 50.1 bits (25), Expect = 0.008 Identities = 58/69 (84%) Strand = Plus / Plus Query: 437 tgcttctacatccatgctaaaatgctgcaggatcatcgtaatagagtattccatgatttc 496 |||||||| ||||||||||||||| |||||| ||||| || | || ||||| |||||| Sbjct: 1457 tgcttctatatccatgctaaaatgaggcaggagcatcgcaaccgcgtgttccacgatttc 1516 Query: 497 cgtaatggc 505 || |||||| Sbjct: 1517 cgaaatggc 1525
>ref|XM_569901.1| Cryptococcus neoformans var. neoformans JEC21 RNA helicase (CNC06460) partial mRNA Length = 2546 Score = 50.1 bits (25), Expect = 0.008 Identities = 70/85 (82%) Strand = Plus / Plus Query: 301 tgttgaagaaaggcagaaagtccattgtctgaacactcttttttccaagctgcaaattaa 360 |||||||||| |||||||||||||| || ||||| || || || ||||| ||||| || Sbjct: 1031 tgttgaagaatctcagaaagtccattgcctcaacaccctcttctctaagctccaaatcaa 1090 Query: 361 tcaatctataatattctgtaactcc 385 |||||||| || ||||| |||||| Sbjct: 1091 ccaatctatcatcttctgcaactcc 1115 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 87 ttatggatgaggcagacaagcttct 111 |||||||||| |||||||||||||| Sbjct: 817 ttatggatgaagcagacaagcttct 841
>emb|CR391937.10| Zebrafish DNA sequence from clone CH211-175G6 in linkage group 16, complete sequence Length = 224481 Score = 50.1 bits (25), Expect = 0.008 Identities = 61/73 (83%) Strand = Plus / Plus Query: 395 gttgaactactggcgaagaagatcacagagcttggttactcttgcttctacatccatgct 454 |||||||| || || |||||||||||| | ||||| || || ||||| ||||||||||| Sbjct: 173746 gttgaactcctcgccaagaagatcacacaacttggctattcctgcttttacatccatgca 173805 Query: 455 aaaatgctgcagg 467 || ||| |||||| Sbjct: 173806 aagatgatgcagg 173818
>ref|XM_760086.1| Theileria parva strain Muguga ATP-dependent RNA helicase (TP02_0613) partial mRNA Length = 1741 Score = 48.1 bits (24), Expect = 0.031 Identities = 60/72 (83%) Strand = Plus / Plus Query: 395 gttgaactactggcgaagaagatcacagagcttggttactcttgcttctacatccatgct 454 |||||||||||||| |||||||| || ||| | || | ||| || |||||||||||||| Sbjct: 1263 gttgaactactggccaagaagattacggagttgggattctcctgtttctacatccatgcg 1322 Query: 455 aaaatgctgcag 466 || ||| ||||| Sbjct: 1323 aagatgatgcag 1334
>gb|AE016816.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome III, complete sequence Length = 907057 Score = 48.1 bits (24), Expect = 0.031 Identities = 48/56 (85%) Strand = Plus / Plus Query: 248 attaatcttatggacgaacttacattgaagggaattacccagttctacgcttttgt 303 ||||| || ||||||||||| || |||||||| ||||| |||| |||||| ||||| Sbjct: 696092 attaacctgatggacgaactaacgttgaagggtattacgcagtactacgcatttgt 696147
>ref|NM_208952.1| Eremothecium gossypii ACR197Wp (ACR197W), mRNA Length = 1455 Score = 48.1 bits (24), Expect = 0.031 Identities = 48/56 (85%) Strand = Plus / Plus Query: 248 attaatcttatggacgaacttacattgaagggaattacccagttctacgcttttgt 303 ||||| || ||||||||||| || |||||||| ||||| |||| |||||| ||||| Sbjct: 688 attaacctgatggacgaactaacgttgaagggtattacgcagtactacgcatttgt 743
>gb|AC146547.2| Gasterosteus aculeatus clone CH213-33E5, complete sequence Length = 207268 Score = 46.1 bits (23), Expect = 0.12 Identities = 53/63 (84%) Strand = Plus / Minus Query: 405 tggcgaagaagatcacagagcttggttactcttgcttctacatccatgctaaaatgctgc 464 |||| ||||||||||| |||| || ||||| |||||||||||||| || || ||| ||| Sbjct: 127270 tggccaagaagatcactcagctgggctactcctgcttctacatccacgccaagatgatgc 127211 Query: 465 agg 467 ||| Sbjct: 127210 agg 127208 Score = 42.1 bits (21), Expect = 1.9 Identities = 33/37 (89%) Strand = Plus / Minus Query: 311 aggcagaaagtccattgtctgaacactcttttttcca 347 |||||||||||||| || || ||||| |||||||||| Sbjct: 127544 aggcagaaagtccactgcctaaacacacttttttcca 127508
>gb|AC099589.12| Mus musculus chromosome 1, clone RP23-337A19, complete sequence Length = 264062 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 451 tgctaaaatgctgcaggatcat 472 |||||||||||||||||||||| Sbjct: 73366 tgctaaaatgctgcaggatcat 73345
>gb|AC129190.3| Mus musculus BAC clone RP24-79D2 from chromosome 1, complete sequence Length = 236342 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 451 tgctaaaatgctgcaggatcat 472 |||||||||||||||||||||| Sbjct: 50105 tgctaaaatgctgcaggatcat 50084
>ref|XM_724606.1| Plasmodium yoelii yoelii str. 17XNL ATP-dependent RNA Helicase (PY01870) partial mRNA Length = 1434 Score = 44.1 bits (22), Expect = 0.49 Identities = 28/30 (93%) Strand = Plus / Plus Query: 353 caaattaatcaatctataatattctgtaac 382 |||||||||||| |||||||||| |||||| Sbjct: 1018 caaattaatcaagctataatattttgtaac 1047
>ref|XM_737416.1| Plasmodium chabaudi chabaudi ATP-dependent RNA helicase, (PC000373.03.0) partial mRNA Length = 1290 Score = 44.1 bits (22), Expect = 0.49 Identities = 28/30 (93%) Strand = Plus / Plus Query: 353 caaattaatcaatctataatattctgtaac 382 |||||||||||| |||||||||| |||||| Sbjct: 874 caaattaatcaagctataatattttgtaac 903
>ref|XM_670120.1| Plasmodium berghei strain ANKA ATP-dependent RNA helicase, (PB000603.01.0) partial mRNA Length = 1020 Score = 44.1 bits (22), Expect = 0.49 Identities = 28/30 (93%) Strand = Plus / Plus Query: 353 caaattaatcaatctataatattctgtaac 382 |||||||||||| |||||||||| |||||| Sbjct: 604 caaattaatcaagctataatattttgtaac 633
>emb|AL031776.7|HS312L17 Human DNA sequence from clone RP1-312L17 on chromosome 6q22.2-23.1 Contains the 5' end of the FLJ14440 gene for thrombospondin and a CpG island, complete sequence Length = 108208 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Minus Query: 350 ctgcaaattaatcaatctataatatt 375 ||||||||||||||||||| |||||| Sbjct: 23788 ctgcaaattaatcaatctagaatatt 23763
>gb|AC142113.2| Mus musculus BAC clone RP23-444K20 from chromosome 9, complete sequence Length = 188724 Score = 44.1 bits (22), Expect = 0.49 Identities = 28/30 (93%) Strand = Plus / Plus Query: 431 tactcttgcttctacatccatgctaaaatg 460 ||||||||||| || ||||||||||||||| Sbjct: 5288 tactcttgcttttatatccatgctaaaatg 5317
>gb|AC151971.3| Mus musculus BAC clone RP24-282C4 from 9, complete sequence Length = 179607 Score = 44.1 bits (22), Expect = 0.49 Identities = 28/30 (93%) Strand = Plus / Minus Query: 431 tactcttgcttctacatccatgctaaaatg 460 ||||||||||| || ||||||||||||||| Sbjct: 92671 tactcttgcttttatatccatgctaaaatg 92642
>gb|AC133651.4| Mus musculus BAC clone RP24-239C15 from 1, complete sequence Length = 178756 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 451 tgctaaaatgctgcaggatcat 472 |||||||||||||||||||||| Sbjct: 22842 tgctaaaatgctgcaggatcat 22863
>gb|AE017343.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 3, complete sequence Length = 2105742 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 87 ttatggatgaggcagacaagcttct 111 |||||||||| |||||||||||||| Sbjct: 1880339 ttatggatgaagcagacaagcttct 1880315
>ref|XM_360845.1| Magnaporthe grisea 70-15 hypothetical protein (MG03388.4) partial mRNA Length = 1443 Score = 42.1 bits (21), Expect = 1.9 Identities = 33/37 (89%) Strand = Plus / Plus Query: 410 aagaagatcacagagcttggttactcttgcttctaca 446 ||||||||||| ||||| || ||||| |||||||||| Sbjct: 796 aagaagatcaccgagctcggctactcgtgcttctaca 832
>emb|AL445231.8| Human DNA sequence from clone RP11-27K13 on chromosome 1 Contains the 3' end of the PTGFRN gene for prostaglandin F2 receptor negative regulator, the IGSF2 gene for immunoglobulin superfamily member 2, a novel gene (FLJ42338), the 5' end of the TTF2 gene for RNA polymerase II transcription termination factor and a CpG island, complete sequence Length = 126847 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 516 accttgtgtgtacagatcttt 536 ||||||||||||||||||||| Sbjct: 110318 accttgtgtgtacagatcttt 110298
>emb|AL353765.3| Human DNA sequence from clone RP11-429G17 on chromosome 13 Contains a ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1) (RAC1) pseudogene, complete sequence Length = 164831 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 434 tcttgcttctacatccatgct 454 ||||||||||||||||||||| Sbjct: 121908 tcttgcttctacatccatgct 121928
>ref|NM_164898.1| Drosophila melanogaster maternal expression at 31B CG4916-RB, transcript variant B (me31B), mRNA Length = 1603 Score = 42.1 bits (21), Expect = 1.9 Identities = 72/89 (80%) Strand = Plus / Plus Query: 341 ttttccaagctgcaaattaatcaatctataatattctgtaactccgtaaatcgtgttgaa 400 ||||| |||||||| || ||||| ||||| |||||||| || ||| | ||||| || Sbjct: 964 ttttcgaagctgcagatcaatcagtctatcatattctgcaattccacgcaacgtgtcgag 1023 Query: 401 ctactggcgaagaagatcacagagcttgg 429 ||| |||| || ||||||||||||||||| Sbjct: 1024 ctattggccaaaaagatcacagagcttgg 1052
>ref|NM_136013.1| Drosophila melanogaster beethoven CG15148-RA (btv), mRNA Length = 12060 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 124 ccaaccttctgtggagcagtt 144 ||||||||||||||||||||| Sbjct: 10482 ccaaccttctgtggagcagtt 10502
>ref|NM_078809.2| Drosophila melanogaster maternal expression at 31B CG4916-RA, transcript variant A (me31B), mRNA Length = 1717 Score = 42.1 bits (21), Expect = 1.9 Identities = 72/89 (80%) Strand = Plus / Plus Query: 341 ttttccaagctgcaaattaatcaatctataatattctgtaactccgtaaatcgtgttgaa 400 ||||| |||||||| || ||||| ||||| |||||||| || ||| | ||||| || Sbjct: 1078 ttttcgaagctgcagatcaatcagtctatcatattctgcaattccacgcaacgtgtcgag 1137 Query: 401 ctactggcgaagaagatcacagagcttgg 429 ||| |||| || ||||||||||||||||| Sbjct: 1138 ctattggccaaaaagatcacagagcttgg 1166
>gb|AY051663.1| Drosophila melanogaster LD21247 full length cDNA Length = 1647 Score = 42.1 bits (21), Expect = 1.9 Identities = 72/89 (80%) Strand = Plus / Plus Query: 341 ttttccaagctgcaaattaatcaatctataatattctgtaactccgtaaatcgtgttgaa 400 ||||| |||||||| || ||||| ||||| |||||||| || ||| | ||||| || Sbjct: 992 ttttcgaagctgcagatcaatcagtctatcatattctgcaattccacgcaacgtgtcgag 1051 Query: 401 ctactggcgaagaagatcacagagcttgg 429 ||| |||| || ||||||||||||||||| Sbjct: 1052 ctattggccaaaaagatcacagagcttgg 1080
>gb|AC009849.7|AC009849 Drosophila melanogaster, chromosome 2L, region 31B-31C, BAC clone BACR07H08, complete sequence Length = 153505 Score = 42.1 bits (21), Expect = 1.9 Identities = 72/89 (80%) Strand = Plus / Plus Query: 341 ttttccaagctgcaaattaatcaatctataatattctgtaactccgtaaatcgtgttgaa 400 ||||| |||||||| || ||||| ||||| |||||||| || ||| | ||||| || Sbjct: 69368 ttttcgaagctgcagatcaatcagtctatcatattctgcaattccacgcaacgtgtcgag 69427 Query: 401 ctactggcgaagaagatcacagagcttgg 429 ||| |||| || ||||||||||||||||| Sbjct: 69428 ctattggccaaaaagatcacagagcttgg 69456
>gb|AY654620.1| Cryptococcus neoformans var. grubii virulence associated DEAD box protein 1 (VAD1) gene, complete cds Length = 4576 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 87 ttatggatgaggcagacaagcttct 111 |||||||||| |||||||||||||| Sbjct: 2382 ttatggatgaagcagacaagcttct 2406
>gb|AC011662.1|AC011662 Drosophila melanogaster, chromosome 2L, region 36D-, BAC clones BACR01G10 and BACR05I08, complete sequence Length = 294942 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 124 ccaaccttctgtggagcagtt 144 ||||||||||||||||||||| Sbjct: 165128 ccaaccttctgtggagcagtt 165108
>gb|AE003657.3| Drosophila melanogaster chromosome 2L, section 66 of 83 of the complete sequence Length = 265254 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 124 ccaaccttctgtggagcagtt 144 ||||||||||||||||||||| Sbjct: 76510 ccaaccttctgtggagcagtt 76490
>gb|AE003628.2| Drosophila melanogaster chromosome 2L, section 37 of 83 of the complete sequence Length = 269102 Score = 42.1 bits (21), Expect = 1.9 Identities = 72/89 (80%) Strand = Plus / Plus Query: 341 ttttccaagctgcaaattaatcaatctataatattctgtaactccgtaaatcgtgttgaa 400 ||||| |||||||| || ||||| ||||| |||||||| || ||| | ||||| || Sbjct: 3586 ttttcgaagctgcagatcaatcagtctatcatattctgcaattccacgcaacgtgtcgag 3645 Query: 401 ctactggcgaagaagatcacagagcttgg 429 ||| |||| || ||||||||||||||||| Sbjct: 3646 ctattggccaaaaagatcacagagcttgg 3674
>dbj|AP002954.1| Homo sapiens genomic DNA, chromosome 11q, clons:CTC-89C10, complete sequence Length = 197215 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Minus Query: 428 ggttactcttgcttctacatccatgctaaaatg 460 ||||| ||||||||||| || |||||||||||| Sbjct: 135623 ggttattcttgcttctatattcatgctaaaatg 135591
>gb|M59926.1|DROHELI D.melanogaster RNA helicase mRNA, complete cds Length = 1546 Score = 42.1 bits (21), Expect = 1.9 Identities = 72/89 (80%) Strand = Plus / Plus Query: 341 ttttccaagctgcaaattaatcaatctataatattctgtaactccgtaaatcgtgttgaa 400 ||||| |||||||| || ||||| ||||| |||||||| || ||| | ||||| || Sbjct: 901 ttttcgaagctgcagatcaatcagtctatcatattctgcaattccacgcaacgtgtcgag 960 Query: 401 ctactggcgaagaagatcacagagcttgg 429 ||| |||| || ||||||||||||||||| Sbjct: 961 ctattggccaaaaagatcacagagcttgg 989
>gb|AC161269.4| Mus musculus BAC clone RP23-120K16 from chromosome 15, complete sequence Length = 206234 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 93 atgaggcagacaagcttctt 112 |||||||||||||||||||| Sbjct: 127000 atgaggcagacaagcttctt 126981
>ref|XM_458797.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0D08470g) partial mRNA Length = 1845 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 90 tggatgaggcagacaagctt 109 |||||||||||||||||||| Sbjct: 539 tggatgaggcagacaagctt 558
>gb|AC130605.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0010D04, complete sequence Length = 122599 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 440 ttctacatccatgctaaaat 459 |||||||||||||||||||| Sbjct: 70454 ttctacatccatgctaaaat 70435
>gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome Length = 5650368 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 401 ctactggcgaagaagatcacagagcttg 428 ||||||||||||||| | |||||||||| Sbjct: 3773412 ctactggcgaagaagctgacagagcttg 3773385
>gb|AC121860.4| Mus musculus BAC clone RP24-105K16 from chromosome 15, complete sequence Length = 148328 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 93 atgaggcagacaagcttctt 112 |||||||||||||||||||| Sbjct: 15709 atgaggcagacaagcttctt 15690
>emb|CR759774.13| Zebrafish DNA sequence from clone CH211-147P17 in linkage group 18, complete sequence Length = 149156 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 308 gaaaggcagaaagtccattg 327 |||||||||||||||||||| Sbjct: 30191 gaaaggcagaaagtccattg 30172
>emb|Z84487.2|HS346O6 Human DNA sequence from clone RP3-346O6 on chromosome Xq21 Contains the 5' end of the ATRX gene for alpha thalassemia/mental retardation syndrome X-linked (RAD54 homolog, S. cerevisiae), a fatty acid binding protein 9 , testis (FABP9) pseudogene and two CpG islands, complete sequence Length = 135982 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 360 atcaatctataatattctgt 379 |||||||||||||||||||| Sbjct: 123522 atcaatctataatattctgt 123503
>emb|AL050348.21|HSDJ447F3 Human DNA sequence from clone RP3-447F3 on chromosome 20 Contains the HNRPA1P3 gene for heterogenous nuclear ribonucleoprotein A1 pseudogene 3, the C20orf168 gene for a novel protein with Kunitz/Bovine pancreatic trypsin inhibitor domain, the WFDC3 gene for WAP four-disulfide core domain 3, the C20orf167 gene for a novel protein similar to synaptotagmin 1, the UBE2C gene for ubiquitin-conjugating enzyme E2 (H10), the TNNC2 gene for fast troponin C2 and two CpG islands, complete sequence Length = 97385 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 242 tatgttattaatcttatgga 261 |||||||||||||||||||| Sbjct: 13576 tatgttattaatcttatgga 13595
>emb|CR382136.1| Debaryomyces hansenii chromosome D of strain CBS767 of Debaryomyces hansenii Length = 1602771 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 90 tggatgaggcagacaagctt 109 |||||||||||||||||||| Sbjct: 624376 tggatgaggcagacaagctt 624395
>emb|AL606724.17| Mouse DNA sequence from clone RP23-285D3 on chromosome 11 Contains part of a novel gene, a heat shock protein (Hsp) pseudogene and a CpG island, complete sequence Length = 160470 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 46 aaagaaaggcatttgcattc 65 |||||||||||||||||||| Sbjct: 151822 aaagaaaggcatttgcattc 151803
>gb|CP000077.1| Sulfolobus acidocaldarius DSM 639, complete genome Length = 2225959 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 544 gggaatagatattcaagctg 563 |||||||||||||||||||| Sbjct: 384808 gggaatagatattcaagctg 384827
>gb|AC108107.2| Homo sapiens chromosome 5 clone RP11-217L10, complete sequence Length = 94292 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 40 ccttacaaagaaaggcattt 59 |||||||||||||||||||| Sbjct: 43366 ccttacaaagaaaggcattt 43347
>gb|AF345529.1| TT virus isolate TCHN-G2 Orf2 and Orf1 genes, complete cds Length = 3214 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 233 cctaaaccctatgttattaa 252 |||||||||||||||||||| Sbjct: 2702 cctaaaccctatgttattaa 2721
>emb|BX649643.10| Zebrafish DNA sequence from clone CH211-125M10 in linkage group 22, complete sequence Length = 177325 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 355 aattaatcaatctataatat 374 |||||||||||||||||||| Sbjct: 130763 aattaatcaatctataatat 130782
>gb|AC148709.1| Macaca mulatta Major Histocompatibility Complex BAC MMU391L07, complete sequence Length = 142969 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 301 tgttgaagaaaggcagaaag 320 |||||||||||||||||||| Sbjct: 78296 tgttgaagaaaggcagaaag 78277
>gb|AC148703.1| Macaca mulatta Major Histocompatibility Complex BAC MMU326I17, complete sequence Length = 175689 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 301 tgttgaagaaaggcagaaag 320 |||||||||||||||||||| Sbjct: 161764 tgttgaagaaaggcagaaag 161745
>gb|AC148702.1| Macaca mulatta Major Histocompatibility Complex BAC MMU326H24, complete sequence Length = 202513 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 301 tgttgaagaaaggcagaaag 320 |||||||||||||||||||| Sbjct: 5061 tgttgaagaaaggcagaaag 5042
>gb|AC148695.1| Macaca mulatta Major Histocompatibility Complex BAC MMU244P03, complete sequence Length = 200270 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 301 tgttgaagaaaggcagaaag 320 |||||||||||||||||||| Sbjct: 149166 tgttgaagaaaggcagaaag 149147
>gb|AC148691.1| Macaca mulatta Major Histocompatibility Complex BAC MMU234G08, complete sequence Length = 200068 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 301 tgttgaagaaaggcagaaag 320 |||||||||||||||||||| Sbjct: 190136 tgttgaagaaaggcagaaag 190117
>emb|CR376760.1| Pan troglodytes chromosome X BAC PTB-056G20, complete sequence Length = 142982 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 360 atcaatctataatattctgt 379 |||||||||||||||||||| Sbjct: 110829 atcaatctataatattctgt 110810
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 405 tggcgaagaagatcacagagcttg 428 |||||| ||||||||||||||||| Sbjct: 5007972 tggcgatgaagatcacagagcttg 5007995
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 440 ttctacatccatgctaaaat 459 |||||||||||||||||||| Sbjct: 24384664 ttctacatccatgctaaaat 24384645 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 405 tggcgaagaagatcacagagcttg 428 |||||| ||||||||||||||||| Sbjct: 12433563 tggcgatgaagatcacagagcttg 12433586
>dbj|AB128049.1| Macaca mulatta genes, MHC class I region, partial and complete cds Length = 3284914 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 301 tgttgaagaaaggcagaaag 320 |||||||||||||||||||| Sbjct: 1257116 tgttgaagaaaggcagaaag 1257135
>dbj|AB087746.1| Ixodes uriae mitochondrial DNA, complete genome, isolate:ag5 Length = 15053 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 356 attaatcaatctataatatt 375 |||||||||||||||||||| Sbjct: 14458 attaatcaatctataatatt 14477
>emb|AL840629.24| Mouse DNA sequence from clone RP23-334A5 on chromosome 4, complete sequence Length = 214140 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 42 ttacaaagaaaggcatttgc 61 |||||||||||||||||||| Sbjct: 149343 ttacaaagaaaggcatttgc 149324
>emb|CT025569.14| Mouse DNA sequence from clone RP24-68J22 on chromosome 13, complete sequence Length = 230723 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 308 gaaaggcagaaagtccattg 327 |||||||||||||||||||| Sbjct: 198959 gaaaggcagaaagtccattg 198978
>dbj|AP001153.5| Homo sapiens genomic DNA, chromosome 11 clone:RP11-886D15, complete sequence Length = 172487 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 62 attctgaaggactgttcaat 81 |||||||||||||||||||| Sbjct: 19397 attctgaaggactgttcaat 19378
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 405 tggcgaagaagatcacagagcttg 428 |||||| ||||||||||||||||| Sbjct: 5007954 tggcgatgaagatcacagagcttg 5007977
>emb|AL831811.5|CNS08CAO Oryza sativa chromosome 12, . BAC OJ1561_A05 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 91053 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 405 tggcgaagaagatcacagagcttg 428 |||||| ||||||||||||||||| Sbjct: 51346 tggcgatgaagatcacagagcttg 51369
>dbj|AB038620.1| TT virus complete genome, isolate:TTVsan-S039 Length = 3792 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 233 cctaaaccctatgttattaa 252 |||||||||||||||||||| Sbjct: 2802 cctaaaccctatgttattaa 2821
>dbj|AB028669.1| TT virus gene for ORF1 and ORF2, complete genome, isolate:TJN02 Length = 3794 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 233 cctaaaccctatgttattaa 252 |||||||||||||||||||| Sbjct: 2809 cctaaaccctatgttattaa 2828
>emb|AL359381.8| Mouse DNA sequence from clone CT7-87K14 on chromosome 17, complete sequence Length = 102917 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 92 gatgaggcagacaagcttct 111 |||||||||||||||||||| Sbjct: 86063 gatgaggcagacaagcttct 86044 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,325,243 Number of Sequences: 3902068 Number of extensions: 5325243 Number of successful extensions: 90472 Number of sequences better than 10.0: 152 Number of HSP's better than 10.0 without gapping: 146 Number of HSP's successfully gapped in prelim test: 7 Number of HSP's that attempted gapping in prelim test: 89937 Number of HSP's gapped (non-prelim): 521 length of query: 565 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 542 effective length of database: 17,143,297,704 effective search space: 9291667355568 effective search space used: 9291667355568 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
