ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags17e03 |
|---|---|
| Clone Library Name | barley_pub |
>S17A5_MOUSE (Q8BN82) Sialin (Solute carrier family 17 member 5) (Sodium/sialic| acid cotransporter) Length = 495 Score = 33.1 bits (74), Expect = 0.69 Identities = 36/155 (23%), Positives = 64/155 (41%), Gaps = 14/155 (9%) Frame = +2 Query: 146 GFIFATFMLSSMLGSSIASRLLARKMKVEGYMQIVFAVSAFTLFLPVATSL----LVPAS 313 G F ++++ + G IASR+ + + G + S FTLF P+A L LV Sbjct: 113 GSFFYGYIVTQIPGGYIASRVGGKLLLGLG----ILGTSVFTLFTPLAADLGVVTLVVLR 168 Query: 314 SVKGSGISFGGSLQLLGFCTFESCVGIFWPSIMKMRSQYIPEEARSTIMNF--------- 466 +++G G G+ +P++ M S + P RS ++ Sbjct: 169 ALEGLG------------------EGVTFPAMHAMWSSWAPPLERSKLLTISYAGAQLGT 210 Query: 467 -FRIPLNLFVCVVLYNVNAFPITVMFGMCSIFLFM 568 +PL+ +C Y +N + +FG+ I F+ Sbjct: 211 VISLPLSGIIC---YYMNWTYVFYLFGIVGIVWFI 242
>S17A5_SHEEP (Q9MZD1) Sialin (Solute carrier family 17 member 5) (Sodium/sialic| acid cotransporter) (Membrane glycoprotein SP55) Length = 495 Score = 32.7 bits (73), Expect = 0.90 Identities = 35/155 (22%), Positives = 64/155 (41%), Gaps = 14/155 (9%) Frame = +2 Query: 146 GFIFATFMLSSMLGSSIASRLLARKMKVEGYMQIVFAVSAFTLFLPVATSL----LVPAS 313 G F ++++ + G +ASR + + G +FA + FTLF P+A LV Sbjct: 113 GSFFYGYIITQIPGGYVASRSGGKLLLGFG----IFATAIFTLFTPLAADFGVGALVALR 168 Query: 314 SVKGSGISFGGSLQLLGFCTFESCVGIFWPSIMKMRSQYIPEEARSTIMNF--------- 466 +++G G G+ +P++ M S + P RS +++ Sbjct: 169 ALEGLG------------------EGVTYPAMHAMWSSWAPPLERSKLLSISYAGAQLGT 210 Query: 467 -FRIPLNLFVCVVLYNVNAFPITVMFGMCSIFLFM 568 +PL+ +C Y +N + FG+ I F+ Sbjct: 211 VVSLPLSGVIC---YYMNWTYVFYFFGIVGIIWFI 242
>Y360_HAEIN (P44661) Probable iron transport system membrane protein HI0360| Length = 282 Score = 32.0 bits (71), Expect = 1.5 Identities = 17/47 (36%), Positives = 24/47 (51%) Frame = +2 Query: 44 ALLGAIQSLFEGSMYTFVFLWTPALSPNDEDIPHGFIFATFMLSSML 184 AL A+ + F G + LW ++S ED GFIF+TF +L Sbjct: 62 ALPYALGAFFAGILAALSILWIKSISKLKEDAVIGFIFSTFFALGLL 108
>NU5C_POAPR (Q32880) NAD(P)H-quinone oxidoreductase chain 5, chloroplast (EC| 1.6.5.-) (NAD(P)H dehydrogenase, chain 5) (NADH-plastoquinone oxidoreductase chain 5) (Fragment) Length = 702 Score = 31.6 bits (70), Expect = 2.0 Identities = 28/122 (22%), Positives = 52/122 (42%) Frame = +2 Query: 95 VFLWTPALSPNDEDIPHGFIFATFMLSSMLGSSIASRLLARKMKVEGYMQIVFAVSAFTL 274 V +++ +DE F++ +F +SMLG +S L+ E + + F Sbjct: 99 VLIYSDGYMSHDEGYLRFFVYISFFTTSMLGLVTSSNLIQIYFFWELVGMCSYLLIGFWF 158 Query: 275 FLPVATSLLVPASSVKGSGISFGGSLQLLGFCTFESCVGIFWPSIMKMRSQYIPEEARST 454 P+A S A G FG L +LGF F + + + K+ + +IP ++ Sbjct: 159 TRPIAASACQKAFVTNRVG-DFGLLLGILGF--FWITGSLEFRDLFKIANNWIPNNGINS 215 Query: 455 IM 460 ++ Sbjct: 216 LL 217
>NU6M_EQUAS (P92486) NADH-ubiquinone oxidoreductase chain 6 (EC 1.6.5.3) (NADH| dehydrogenase subunit 6) Length = 175 Score = 31.6 bits (70), Expect = 2.0 Identities = 27/97 (27%), Positives = 49/97 (50%), Gaps = 5/97 (5%) Frame = +2 Query: 281 PVATSLLVPASSVKGSGI--SFGGS-LQLLGFCTFESCVGIFWPSIMKMRSQYIPEE--A 445 P+ L++ S G GI +FGGS L L+ F + + + + M ++ PE + Sbjct: 26 PIYGGLVLIVSGGVGCGIIMNFGGSFLGLMVFLIYLGGMLVVFGYTTAMATEQYPEVWVS 85 Query: 446 RSTIMNFFRIPLNLFVCVVLYNVNAFPITVMFGMCSI 556 +T+M F + L + V +VLY + + + V+F S+ Sbjct: 86 NATVMGVFLLGLLMEVMLVLYVLKSEEVGVVFKFSSV 122
>PMRA_LACLA (P58120) Multi-drug resistance efflux pump pmrA homolog| Length = 405 Score = 31.2 bits (69), Expect = 2.6 Identities = 35/134 (26%), Positives = 57/134 (42%) Frame = +2 Query: 86 YTFVFLWTPALSPNDEDIPHGFIFATFMLSSMLGSSIASRLLARKMKVEGYMQIVFAVSA 265 + +++ T S N+ G I + LS+ML SS RL + + ++ V Sbjct: 237 FVTLYIKTLTTSTNNLMFISGLIVSAVGLSAMLSSSFLGRLGDKYGSHR--LILIGLVFT 294 Query: 266 FTLFLPVATSLLVPASSVKGSGISFGGSLQLLGFCTFESCVGIFWPSIMKMRSQYIPEEA 445 F ++LP+A S + G LLGF T G PS+ + S+ P+E Sbjct: 295 FIIYLPMA---------FVQSPLQLGILRFLLGFGT-----GALTPSVNSLLSKITPKEG 340 Query: 446 RSTIMNFFRIPLNL 487 S I + ++ NL Sbjct: 341 VSRIFAYAQMCSNL 354
>NU5C_WHEAT (Q95H46) NAD(P)H-quinone oxidoreductase chain 5, chloroplast (EC| 1.6.5.-) (NAD(P)H dehydrogenase, chain 5) (NADH-plastoquinone oxidoreductase chain 5) Length = 739 Score = 31.2 bits (69), Expect = 2.6 Identities = 44/181 (24%), Positives = 76/181 (41%), Gaps = 5/181 (2%) Frame = +2 Query: 95 VFLWTPALSPNDEDIPHGFIFATFMLSSMLGSSIASRLLARKMKVEGYMQIVFAVSAFTL 274 V +++ +DE F++ +F +SMLG +S L+ E + + F Sbjct: 107 VLIYSDGYMSHDEGYLRFFVYISFFNTSMLGLVTSSNLIQIYFFWELVGMCSYLLIGFWF 166 Query: 275 FLPVATSLLVPASSVKGSGISFGGSLQLLGFCTFESCVGIFWPSIMKMRSQYIPEEARST 454 P+A S A G FG L +LGF F + + + K+ + +IP ++ Sbjct: 167 TRPIAASACQKAFVTNRVG-DFGLLLGILGF--FWITGSLEFRDLFKIANNWIPNNGVNS 223 Query: 455 IMNFFRIPLNLFVCVVLYNVNAFPITV-----MFGMCSIFLFMAAILQRRLMVVADLHKL 619 ++ L LF+ V + FP+ V M G I +A++Q MV A + L Sbjct: 224 LLTTLCAFL-LFLGAVAKSAQ-FPLHVWLPDAMEGPTPI----SALIQAATMVAAGIFLL 277 Query: 620 S 622 + Sbjct: 278 A 278
>PLD2_HUMAN (O14939) Phospholipase D2 (EC 3.1.4.4) (PLD 2) (Choline phosphatase| 2) (Phosphatidylcholine-hydrolyzing phospholipase D2) (PLD1C) (hPLD2) Length = 933 Score = 31.2 bits (69), Expect = 2.6 Identities = 16/53 (30%), Positives = 31/53 (58%), Gaps = 3/53 (5%) Frame = -2 Query: 550 THAKHDGDRESIH---IVEHHTHKQVQWYAEEVHDGAPCLLRDILRSHLHDRW 401 T A+H ++ H I++ +++Q +W+A+E+ + A RD L+ H HD + Sbjct: 274 TEARHGVRIDTSHRSLILKCSSYRQARWWAQEITELAQGPGRDFLQLHRHDSY 326
>MS4A5_HUMAN (Q9H3V2) Membrane-spanning 4-domains subfamily A member 5| (Testis-expressed transmembrane 4 protein) (CD20 antigen-like 2) Length = 200 Score = 30.4 bits (67), Expect = 4.5 Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 3/61 (4%) Frame = +2 Query: 203 RLLARKMKVEGYMQIVFAVSAFTLFLPVATSLLVPASS---VKGSGISFGGSLQLLGFCT 373 +L ARKMK+ G +QI+F + F+ + +LL P + SG F GS+ + Sbjct: 41 KLFARKMKILGTIQILFGIMTFSFGVIFLFTLLKPYPRFPFIFLSGYPFWGSVLFINSGA 100 Query: 374 F 376 F Sbjct: 101 F 101
>YQGE_BACSU (P54487) Hypothetical protein yqgE| Length = 430 Score = 30.4 bits (67), Expect = 4.5 Identities = 23/97 (23%), Positives = 43/97 (44%), Gaps = 1/97 (1%) Frame = +2 Query: 38 KIALLGAIQSLFEGSMY-TFVFLWTPALSPNDEDIPHGFIFATFMLSSMLGSSIASRLLA 214 ++ L+GA+ + G + F L P+ D +GF+ + M+G +A +++ Sbjct: 107 RLVLIGAVLGVGYGFYWLAFNVLTFEITEPDTRDFFNGFMGILSSSAGMIGPIVAGFVIS 166 Query: 215 RKMKVEGYMQIVFAVSAFTLFLPVATSLLVPASSVKG 325 R GY ++F++S L V S + KG Sbjct: 167 RLENNTGY-TVIFSLSLSLFALAVVMSFFLKRRESKG 202
>YFDN_ECOLI (P76510) Hypothetical protein yfdN| Length = 164 Score = 30.4 bits (67), Expect = 4.5 Identities = 17/37 (45%), Positives = 19/37 (51%) Frame = -1 Query: 137 CLRRLGSMLESRGRQRCTLSPRTATEWLPAMRFSHXE 27 CL R LESRG R R AT W+ A R SH + Sbjct: 97 CLTRQAEELESRGLYR-----RAATVWMAAFRESHSQ 128
>NU6M_HORSE (P48657) NADH-ubiquinone oxidoreductase chain 6 (EC 1.6.5.3) (NADH| dehydrogenase subunit 6) Length = 175 Score = 30.4 bits (67), Expect = 4.5 Identities = 31/110 (28%), Positives = 55/110 (50%), Gaps = 9/110 (8%) Frame = +2 Query: 239 MQIVFAVSAFTLFL----PVATSLLVPASSVKGSGI--SFGGS-LQLLGFCTFESCVGIF 397 + ++F VS F F P+ L++ S G GI +FGGS L L+ F + + + Sbjct: 9 LSVIFVVS-FVGFSSKPSPIYGGLVLIVSGGVGCGIIMNFGGSFLGLMVFLIYLGGMLVV 67 Query: 398 WPSIMKMRSQYIPEE--ARSTIMNFFRIPLNLFVCVVLYNVNAFPITVMF 541 + M ++ PE + +T+M F + L + V +VLY + + + V+F Sbjct: 68 FGYTTAMATEQYPEVWVSNTTVMGVFLLGLLMEVMLVLYVLKSEEVGVVF 117
>SYY_HELPY (P56417) Tyrosyl-tRNA synthetase (EC 6.1.1.1) (Tyrosine--tRNA| ligase) (TyrRS) Length = 402 Score = 30.0 bits (66), Expect = 5.8 Identities = 29/115 (25%), Positives = 50/115 (43%), Gaps = 3/115 (2%) Frame = +2 Query: 35 EKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEDIPHGFIFATFMLSSMLGSSIASRLLA 214 E A+ G I S+ + M+ + L + ED+ HG + T + + +AS ++A Sbjct: 246 EPNAMFGKIMSVSDDLMWRYYTLLSTKTLEEIEDLKHGILNQT-LHPKAVKEDLASEIVA 304 Query: 215 RKMKVEGYMQIVFAVSAFTLFLPVATSLLVP---ASSVKGSGISFGGSLQLLGFC 370 R Y A+ A F V ++ L+P + S G+ L+ +GFC Sbjct: 305 R------YYDNDQAIKAKEQFSKVFSANLLPEILSESDFDEGVGILDVLKQIGFC 353
>OPDE_PSEAE (Q01602) Transcription regulatory protein opdE| Length = 402 Score = 30.0 bits (66), Expect = 5.8 Identities = 21/74 (28%), Positives = 28/74 (37%) Frame = +2 Query: 104 WTPALSPNDEDIPHGFIFATFMLSSMLGSSIASRLLARKMKVEGYMQIVFAVSAFTLFLP 283 W + P D + G A LS LGS++ L R GY FA +A L Sbjct: 333 WIARVFPEDAEAGGGLFVAVVQLSIALGSTLGGLLFDR----TGYQATFFASAAMLLIAA 388 Query: 284 VATSLLVPASSVKG 325 T L + + G Sbjct: 389 FLTILTARSKAPAG 402
>NU5C_SORBI (Q33066) NAD(P)H-quinone oxidoreductase chain 5, chloroplast (EC| 1.6.5.-) (NAD(P)H dehydrogenase, chain 5) (NADH-plastoquinone oxidoreductase chain 5) (Fragment) Length = 702 Score = 30.0 bits (66), Expect = 5.8 Identities = 28/122 (22%), Positives = 52/122 (42%) Frame = +2 Query: 95 VFLWTPALSPNDEDIPHGFIFATFMLSSMLGSSIASRLLARKMKVEGYMQIVFAVSAFTL 274 V +++ +DE F++ +F +SMLG +S L+ E + + F Sbjct: 99 VLIYSDDYMSHDEGYLRFFVYISFFNTSMLGLVTSSNLIQIYFFWELVGMCSYLLIGFWF 158 Query: 275 FLPVATSLLVPASSVKGSGISFGGSLQLLGFCTFESCVGIFWPSIMKMRSQYIPEEARST 454 P+A S A G FG L +LGF F + + + K+ + +IP ++ Sbjct: 159 TRPIAASACQKAFVTNRVG-DFGLLLGILGF--FWITGSLEFRDLFKIANNWIPNNGINS 215 Query: 455 IM 460 ++ Sbjct: 216 LL 217
>NU5C_SACOF (Q6ENQ0) NAD(P)H-quinone oxidoreductase chain 5, chloroplast (EC| 1.6.5.-) (NAD(P)H dehydrogenase, chain 5) (NADH-plastoquinone oxidoreductase chain 5) Length = 738 Score = 30.0 bits (66), Expect = 5.8 Identities = 28/122 (22%), Positives = 52/122 (42%) Frame = +2 Query: 95 VFLWTPALSPNDEDIPHGFIFATFMLSSMLGSSIASRLLARKMKVEGYMQIVFAVSAFTL 274 V +++ +DE F++ +F +SMLG +S L+ E + + F Sbjct: 107 VLIYSDDYMSHDEGYLRFFVYISFFNTSMLGLVTSSNLIQIYFFWELVGMCSYLLIGFWF 166 Query: 275 FLPVATSLLVPASSVKGSGISFGGSLQLLGFCTFESCVGIFWPSIMKMRSQYIPEEARST 454 P+A S A G FG L +LGF F + + + K+ + +IP ++ Sbjct: 167 TRPIAASACQKAFVTNRVG-DFGLLLGILGF--FWITGSLEFRDLFKIANNWIPNNGINS 223 Query: 455 IM 460 ++ Sbjct: 224 LL 225
>NU5C_SACHY (Q6L3E3) NAD(P)H-quinone oxidoreductase chain 5, chloroplast (EC| 1.6.5.-) (NAD(P)H dehydrogenase, chain 5) (NADH-plastoquinone oxidoreductase chain 5) Length = 738 Score = 30.0 bits (66), Expect = 5.8 Identities = 28/122 (22%), Positives = 52/122 (42%) Frame = +2 Query: 95 VFLWTPALSPNDEDIPHGFIFATFMLSSMLGSSIASRLLARKMKVEGYMQIVFAVSAFTL 274 V +++ +DE F++ +F +SMLG +S L+ E + + F Sbjct: 107 VLIYSDDYMSHDEGYLRFFVYISFFNTSMLGLVTSSNLIQIYFFWELVGMCSYLLIGFWF 166 Query: 275 FLPVATSLLVPASSVKGSGISFGGSLQLLGFCTFESCVGIFWPSIMKMRSQYIPEEARST 454 P+A S A G FG L +LGF F + + + K+ + +IP ++ Sbjct: 167 TRPIAASACQKAFVTNRVG-DFGLLLGILGF--FWITGSLEFRDLFKIANNWIPNNGINS 223 Query: 455 IM 460 ++ Sbjct: 224 LL 225
>NU5C_MAIZE (P46620) NAD(P)H-quinone oxidoreductase chain 5, chloroplast (EC| 1.6.5.-) (NAD(P)H dehydrogenase, chain 5) (NADH-plastoquinone oxidoreductase chain 5) Length = 738 Score = 30.0 bits (66), Expect = 5.8 Identities = 28/122 (22%), Positives = 52/122 (42%) Frame = +2 Query: 95 VFLWTPALSPNDEDIPHGFIFATFMLSSMLGSSIASRLLARKMKVEGYMQIVFAVSAFTL 274 V +++ +DE F++ +F +SMLG +S L+ E + + F Sbjct: 107 VLIYSDDYMSHDEGYLRFFVYISFFNTSMLGLVTSSNLIQIYFFWELVGMCSYLLIGFWF 166 Query: 275 FLPVATSLLVPASSVKGSGISFGGSLQLLGFCTFESCVGIFWPSIMKMRSQYIPEEARST 454 P+A S A G FG L +LGF F + + + K+ + +IP ++ Sbjct: 167 TRPIAASACQKAFVTNRVG-DFGLLLGILGF--FWITGSLEFRDLFKIANNWIPNNGINS 223 Query: 455 IM 460 ++ Sbjct: 224 LL 225
>K1199_HUMAN (Q8WUJ3) Protein KIAA1199 precursor| Length = 1361 Score = 30.0 bits (66), Expect = 5.8 Identities = 9/31 (29%), Positives = 19/31 (61%) Frame = +1 Query: 487 VCVCGALQCECFPYHRHVWHVFNLPLHGGNL 579 + V G ++ +C+PY H+ + F+ GG++ Sbjct: 498 IIVMGEMEDKCYPYRNHICNFFDFDTFGGHI 528
>Y1464_METJA (Q58859) Hypothetical GTP-binding protein MJ1464| Length = 373 Score = 29.6 bits (65), Expect = 7.6 Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 1/79 (1%) Frame = -3 Query: 498 THTNRFSGMRKKFMMVLLASSGIY*DLIFMIDGQKMPTHDSKVQKPSS-CREPPNDMPLP 322 TH F G+ KK +L S I +++ + G+K T D+ +K + CRE ++ Sbjct: 296 THLKDFDGLYKKIKKPVLGSEEIDGNIVVVSFGEK--TKDACRKKVENLCRERNIEVLSK 353 Query: 321 FTEDAGTRRLVATGRKRVK 265 F + G + KRVK Sbjct: 354 FGDKIGANNIYVAVGKRVK 372
>NU5C_ORYSA (P12129) NAD(P)H-quinone oxidoreductase chain 5, chloroplast (EC| 1.6.5.-) (NAD(P)H dehydrogenase, chain 5) (NADH-plastoquinone oxidoreductase chain 5) Length = 734 Score = 29.6 bits (65), Expect = 7.6 Identities = 28/122 (22%), Positives = 52/122 (42%) Frame = +2 Query: 95 VFLWTPALSPNDEDIPHGFIFATFMLSSMLGSSIASRLLARKMKVEGYMQIVFAVSAFTL 274 V +++ +DE F++ +F +SMLG +S L+ E + + F Sbjct: 107 VLIYSDDYMSHDEGYLRFFVYISFFNTSMLGLVTSSNLIQIYFFWELVGMCSYLLIGFWF 166 Query: 275 FLPVATSLLVPASSVKGSGISFGGSLQLLGFCTFESCVGIFWPSIMKMRSQYIPEEARST 454 P+A S A G FG L +LGF F + + + K+ + +IP ++ Sbjct: 167 TRPIAASACQKAFVTNRVG-DFGLLLGILGF--FWITGSLEFRDLFKIANNWIPNNEINS 223 Query: 455 IM 460 ++ Sbjct: 224 LL 225
>NU5C_ORYNI (Q6ENB0) NAD(P)H-quinone oxidoreductase chain 5, chloroplast (EC| 1.6.5.-) (NAD(P)H dehydrogenase, chain 5) (NADH-plastoquinone oxidoreductase chain 5) Length = 734 Score = 29.6 bits (65), Expect = 7.6 Identities = 28/122 (22%), Positives = 52/122 (42%) Frame = +2 Query: 95 VFLWTPALSPNDEDIPHGFIFATFMLSSMLGSSIASRLLARKMKVEGYMQIVFAVSAFTL 274 V +++ +DE F++ +F +SMLG +S L+ E + + F Sbjct: 107 VLIYSDDYMSHDEGYLRFFVYISFFNTSMLGLVTSSNLIQIYFFWELVGMCSYLLIGFWF 166 Query: 275 FLPVATSLLVPASSVKGSGISFGGSLQLLGFCTFESCVGIFWPSIMKMRSQYIPEEARST 454 P+A S A G FG L +LGF F + + + K+ + +IP ++ Sbjct: 167 TRPIAASACQKAFVTNRVG-DFGLLLGILGF--FWITGSLEFRDLFKIANNWIPNNEINS 223 Query: 455 IM 460 ++ Sbjct: 224 LL 225
>YKM8_YEAST (P36069) Hypothetical 33.8 kDa protein in MYO3-PGM1 intergenic| region Length = 295 Score = 29.3 bits (64), Expect = 10.0 Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 8/71 (11%) Frame = +2 Query: 50 LGAIQSLFEGS-----MYTFVFLWTPALSPNDEDIPHGFIFATFMLSSM---LGSSIASR 205 LG + +F S + TF+ WTP L+ E +P G +T ++ + LGS + Sbjct: 121 LGMLPHVFFSSPMRRCLETFIESWTPVLAETQE-LPAGTKISTRIIEGLRETLGSHTCDK 179 Query: 206 LLARKMKVEGY 238 +A M V+ Y Sbjct: 180 RVAHSMAVDEY 190
>NU5C_HORVU (Q32440) NAD(P)H-quinone oxidoreductase chain 5, chloroplast (EC| 1.6.5.-) (NAD(P)H dehydrogenase, chain 5) (NADH-plastoquinone oxidoreductase chain 5) (Fragment) Length = 705 Score = 29.3 bits (64), Expect = 10.0 Identities = 27/122 (22%), Positives = 52/122 (42%) Frame = +2 Query: 95 VFLWTPALSPNDEDIPHGFIFATFMLSSMLGSSIASRLLARKMKVEGYMQIVFAVSAFTL 274 V +++ +DE F++ +F +SMLG +S L+ E + + F Sbjct: 99 VLIYSDGYMSHDEGYLRFFVYISFFNTSMLGLVTSSNLIQIYFFWELVGMCSYLLIGFWF 158 Query: 275 FLPVATSLLVPASSVKGSGISFGGSLQLLGFCTFESCVGIFWPSIMKMRSQYIPEEARST 454 P+A S A G FG L +LGF F + + + ++ + +IP ++ Sbjct: 159 TRPIAASACQKAFVTNRVG-DFGLLLGILGF--FWITGSLEFRDLFQIANNWIPNNGINS 215 Query: 455 IM 460 ++ Sbjct: 216 LL 217 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 99,630,630 Number of Sequences: 219361 Number of extensions: 2320642 Number of successful extensions: 6239 Number of sequences better than 10.0: 24 Number of HSP's better than 10.0 without gapping: 6007 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6237 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5767334219 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
