Clone Information

BLAST Search Result

Clone Name	bags17d09
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	EXPA1_ARATH (Q9C554) Alpha-expansin 1 precursor (AtEXPA1) (At-EX...	158	8e-39
2	EXP15_ARATH (O80622) Alpha-expansin 15 precursor (AtEXPA15) (At-...	156	3e-38
3	EXP10_ARATH (Q9LDR9) Alpha-expansin 10 precursor (AtEXPA10) (At-...	156	4e-38
4	EXP14_ARATH (Q9FMA0) Putative alpha-expansin 14 precursor (AtEXP...	154	2e-37
5	EXPA8_ARATH (O22874) Alpha-expansin 8 precursor (AtEXPA8) (At-EX...	151	1e-36
6	EXPA4_ARATH (O48818) Alpha-expansin 4 precursor (AtEXPA4) (At-EX...	143	3e-34
7	EXPA9_ARATH (Q9LZ99) Alpha-expansin 9 precursor (AtEXPA9) (At-EX...	141	1e-33
8	EXPA5_ARATH (Q38864) Alpha-expansin 5 precursor (AtEXPA5) (At-EX...	140	2e-33
9	EXPA2_ARATH (Q38866) Alpha-expansin 2 precursor (AtEXPA2) (At-EX...	140	2e-33
10	EXP16_ARATH (Q9M2S9) Alpha-expansin 16 precursor (AtEXPA16) (At-...	140	2e-33
11	EXPA3_ARATH (O80932) Alpha-expansin 3 precursor (AtEXPA3) (At-EX...	137	2e-32
12	EXPA6_ARATH (Q38865) Alpha-expansin 6 precursor (AtEXPA6) (At-EX...	136	4e-32
13	EXP11_ARATH (Q9LNU3) Alpha-expansin 11 precursor (AtEXPA11) (At-...	127	1e-29
14	EXP13_ARATH (Q9M9P0) Alpha-expansin 13 precursor (AtEXPA13) (At-...	110	3e-24
15	EXP17_ARATH (Q9ZSI1) Putative alpha-expansin 17 precursor (AtEXP...	109	4e-24
16	EXP22_ARATH (Q9FL80) Putative alpha-expansin 22 precursor (AtEXP...	106	4e-23
17	EXP26_ARATH (Q9FL78) Putative alpha-expansin 26 precursor (AtEXP...	103	2e-22
18	EXPA7_ARATH (Q9LN94) Alpha-expansin 7 precursor (AtEXPA7) (At-EX...	100	2e-21
19	EXP25_ARATH (Q9FL77) Putative alpha-expansin 25 precursor (AtEXP...	100	3e-21
20	EXP23_ARATH (Q9FL79) Alpha-expansin 23 precursor (AtEXPA23) (At-...	100	3e-21
21	EXP12_ARATH (Q9LDJ3) Alpha-expansin 12 precursor (AtEXPA12) (At-...	100	3e-21
22	EXP24_ARATH (Q9FL76) Alpha-expansin 24 precursor (AtEXPA24) (At-...	99	6e-21
23	EXP21_ARATH (Q9FL81) Putative alpha-expansin 21 precursor (AtEXP...	99	7e-21
24	EXP20_ARATH (Q9SZM1) Alpha-expansin 20 precursor (AtEXPA20) (At-...	96	6e-20
25	EXP18_ARATH (Q9LQ07) Alpha-expansin 18 precursor (AtEXPA18) (At-...	95	1e-19
26	EXPB2_ARATH (Q9SHY6) Putative beta-expansin 2 precursor (AtEXPB2...	42	0.001
27	MPAO1_ORYSA (Q40638) Major pollen allergen Ory s 1 precursor (Or...	35	0.17
28	EXPB1_ARATH (Q9SKU2) Beta-expansin 1 precursor (AtEXPB1) (At-EXP...	33	0.50
29	EXPL3_ARATH (Q9LZT5) Expansin-like 3 precursor (AtEXPL3) (At-EXP...	33	0.50
30	EXPL2_ARATH (Q9SVE5) Expansin-like 2 precursor (AtEXPL2) (At-EXP...	32	0.86
31	NELF_RAT (Q9EPI6) Nasal embryonic luteinizing hormone-releasing ...	32	1.5
32	NELF_MOUSE (Q99NF2) Nasal embryonic luteinizing hormone-releasin...	32	1.5
33	EXPB3_ARATH (Q9M0I2) Beta-expansin 3 precursor (AtEXPB3) (At-EXP...	32	1.5
34	RLUD_NITEU (Q82WZ5) Ribosomal large subunit pseudouridine syntha...	31	2.5
35	REXO3_SCHPO (Q9P7H2) RNA exonuclease 3 (EC 3.1.-.-)	31	2.5
36	YR24_CAEEL (Q09341) Hypothetical protein W02B3.4 in chromosome III	30	3.3
37	IMP1_YEAST (P28627) Mitochondrial inner membrane protease subuni...	29	7.3
38	MMPL7_MYCTU (P65370) Putative membrane protein mmpL7	29	7.3
39	MMPL7_MYCBO (P65371) Putative membrane protein mmpL7	29	7.3
40	EXPL1_ARATH (Q9LZT4) Expansin-like 1 precursor (AtEXPL1) (At-EXP...	29	9.5
41	SPTB1_HUMAN (P11277) Spectrin beta chain, erythrocyte (Beta-I sp...	29	9.5
42	VP4_ROTGI (P15155) Outer capsid protein VP4 (Hemagglutinin) (Out...	29	9.5

>EXPA1_ARATH (Q9C554) Alpha-expansin 1 precursor (AtEXPA1) (At-EXP1) (AtEx1)|
           (Ath-ExpAlpha-1.2)
          Length = 250

 Score =  158 bits (400), Expect = 8e-39
 Identities = 69/93 (74%), Positives = 81/93 (87%)
 Frame = +2

Query: 257 RVPCVKKGGIRFTINGHSYFNLVLVTNVAGAGDARSVSIKGTRTGWQAMSRNWGMNWQSN 436
           RVPCV++GGIRFTINGHSYFNLVL+TNV GAGD  S  +KG+RTGWQAMSRNWG NWQSN
Sbjct: 149 RVPCVRRGGIRFTINGHSYFNLVLITNVGGAGDVHSAMVKGSRTGWQAMSRNWGQNWQSN 208

Query: 437 TFLDGQCLSFRVTSSDGRTVTSNAAAPAGWQFG 535
           ++L+GQ LSF+VT+SDG+T+ SN  A AGW FG
Sbjct: 209 SYLNGQSLSFKVTTSDGQTIVSNNVANAGWSFG 241

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>EXP15_ARATH (O80622) Alpha-expansin 15 precursor (AtEXPA15) (At-EXP15) (AtEx15)|
           (Ath-ExpAlpha-1.3)
          Length = 248

 Score =  156 bits (395), Expect = 3e-38
 Identities = 70/93 (75%), Positives = 79/93 (84%)
 Frame = +2

Query: 257 RVPCVKKGGIRFTINGHSYFNLVLVTNVAGAGDARSVSIKGTRTGWQAMSRNWGMNWQSN 436
           RVPC+++GGIRFTINGHSYFNLVLVTNV GAGD  SV++KG+RT WQ MSRNWG NWQSN
Sbjct: 147 RVPCMRRGGIRFTINGHSYFNLVLVTNVGGAGDVHSVAVKGSRTRWQQMSRNWGQNWQSN 206

Query: 437 TFLDGQCLSFRVTSSDGRTVTSNAAAPAGWQFG 535
             L+GQ LSF+VT+SDGRTV SN  APA W FG
Sbjct: 207 NLLNGQALSFKVTASDGRTVVSNNIAPASWSFG 239

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>EXP10_ARATH (Q9LDR9) Alpha-expansin 10 precursor (AtEXPA10) (At-EXP10) (AtEx10)|
           (Ath-ExpAlpha-1.1)
          Length = 249

 Score =  156 bits (394), Expect = 4e-38
 Identities = 70/93 (75%), Positives = 81/93 (87%)
 Frame = +2

Query: 257 RVPCVKKGGIRFTINGHSYFNLVLVTNVAGAGDARSVSIKGTRTGWQAMSRNWGMNWQSN 436
           RVPC ++GGIRFTINGHSYFNLVL+TNV GAGD  S +IKG+RT WQAMSRNWG NWQSN
Sbjct: 148 RVPCRRRGGIRFTINGHSYFNLVLITNVGGAGDVHSAAIKGSRTVWQAMSRNWGQNWQSN 207

Query: 437 TFLDGQCLSFRVTSSDGRTVTSNAAAPAGWQFG 535
           ++L+GQ LSF+VT+SDGRTV S  AAPAGW +G
Sbjct: 208 SYLNGQALSFKVTTSDGRTVVSFNAAPAGWSYG 240

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>EXP14_ARATH (Q9FMA0) Putative alpha-expansin 14 precursor (AtEXPA14) (At-EXP14)|
           (AtEx14) (Ath-ExpAlpha-1.5)
          Length = 255

 Score =  154 bits (388), Expect = 2e-37
 Identities = 72/93 (77%), Positives = 77/93 (82%)
 Frame = +2

Query: 257 RVPCVKKGGIRFTINGHSYFNLVLVTNVAGAGDARSVSIKGTRTGWQAMSRNWGMNWQSN 436
           RV C +KGGIRFTINGHSYFNLVL+TNVAGAGD  SVSIKGT T WQ+MSRNWG NWQSN
Sbjct: 151 RVACRRKGGIRFTINGHSYFNLVLITNVAGAGDVISVSIKGTNTRWQSMSRNWGQNWQSN 210

Query: 437 TFLDGQCLSFRVTSSDGRTVTSNAAAPAGWQFG 535
             LDGQ LSF+VT+SDGRTV SN A P  W FG
Sbjct: 211 AKLDGQALSFKVTTSDGRTVISNNATPRNWSFG 243

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>EXPA8_ARATH (O22874) Alpha-expansin 8 precursor (AtEXPA8) (At-EXP8) (AtEx8)|
           (Ath-ExpAlpha-1.11)
          Length = 253

 Score =  151 bits (382), Expect = 1e-36
 Identities = 68/94 (72%), Positives = 82/94 (87%), Gaps = 1/94 (1%)
 Frame = +2

Query: 257 RVPCVKKGGIRFTINGHSYFNLVLVTNVAGAGDARSVSIKGTRT-GWQAMSRNWGMNWQS 433
           RVPC+KKGGIRFTINGHSYFNLVL++NV GAGD  +VSIKG++T  WQAMSRNWG NWQS
Sbjct: 152 RVPCMKKGGIRFTINGHSYFNLVLISNVGGAGDVHAVSIKGSKTQSWQAMSRNWGQNWQS 211

Query: 434 NTFLDGQCLSFRVTSSDGRTVTSNAAAPAGWQFG 535
           N++++ Q LSF+VT+SDGRT+ SN  AP+ WQFG
Sbjct: 212 NSYMNDQSLSFQVTTSDGRTLVSNDVAPSNWQFG 245

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>EXPA4_ARATH (O48818) Alpha-expansin 4 precursor (AtEXPA4) (At-EXP4) (AtEx4)|
           (Ath-ExpAlpha-1.6)
          Length = 257

 Score =  143 bits (360), Expect = 3e-34
 Identities = 66/93 (70%), Positives = 73/93 (78%)
 Frame = +2

Query: 257 RVPCVKKGGIRFTINGHSYFNLVLVTNVAGAGDARSVSIKGTRTGWQAMSRNWGMNWQSN 436
           RVPC K+GGIRFTINGH YFNLVL+TNVAGAGD    S+KG+RTGW ++SRNWG NWQSN
Sbjct: 155 RVPCRKRGGIRFTINGHRYFNLVLITNVAGAGDIVRASVKGSRTGWMSLSRNWGQNWQSN 214

Query: 437 TFLDGQCLSFRVTSSDGRTVTSNAAAPAGWQFG 535
             L GQ LSFRVT SD RT TS    P+ WQFG
Sbjct: 215 AVLVGQALSFRVTGSDRRTSTSWNMVPSNWQFG 247

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>EXPA9_ARATH (Q9LZ99) Alpha-expansin 9 precursor (AtEXPA9) (At-EXP9) (AtEx9)|
           (Ath-ExpAlpha-1.10)
          Length = 258

 Score =  141 bits (356), Expect = 1e-33
 Identities = 66/93 (70%), Positives = 73/93 (78%)
 Frame = +2

Query: 257 RVPCVKKGGIRFTINGHSYFNLVLVTNVAGAGDARSVSIKGTRTGWQAMSRNWGMNWQSN 436
           R+PC KKGGIRFTING  YFNLVLVTNVAGAGD   VS+KG+ T W  +SRNWG NWQSN
Sbjct: 156 RIPCRKKGGIRFTINGFKYFNLVLVTNVAGAGDVIKVSVKGSNTQWLDLSRNWGQNWQSN 215

Query: 437 TFLDGQCLSFRVTSSDGRTVTSNAAAPAGWQFG 535
             L GQ LSFRV +SDGR+ TSN  AP+ WQFG
Sbjct: 216 ALLVGQSLSFRVKTSDGRSSTSNNIAPSNWQFG 248

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>EXPA5_ARATH (Q38864) Alpha-expansin 5 precursor (AtEXPA5) (At-EXP5) (AtEx5)|
           (Ath-ExpAlpha-1.4)
          Length = 255

 Score =  140 bits (353), Expect = 2e-33
 Identities = 66/93 (70%), Positives = 74/93 (79%)
 Frame = +2

Query: 257 RVPCVKKGGIRFTINGHSYFNLVLVTNVAGAGDARSVSIKGTRTGWQAMSRNWGMNWQSN 436
           RV C + GGIRFTINGHSYFNLVLVTNV GAGD  SVS+KG+RT WQ MSRNWG NWQSN
Sbjct: 153 RVRCKRSGGIRFTINGHSYFNLVLVTNVGGAGDVHSVSMKGSRTKWQLMSRNWGQNWQSN 212

Query: 437 TFLDGQCLSFRVTSSDGRTVTSNAAAPAGWQFG 535
           ++L+GQ LSF VT+SD R+V S   AP  W FG
Sbjct: 213 SYLNGQSLSFVVTTSDRRSVVSFNVAPPTWSFG 245

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>EXPA2_ARATH (Q38866) Alpha-expansin 2 precursor (AtEXPA2) (At-EXP2) (AtEx2)|
           (Ath-ExpAlpha-1.12)
          Length = 255

 Score =  140 bits (353), Expect = 2e-33
 Identities = 66/94 (70%), Positives = 76/94 (80%), Gaps = 1/94 (1%)
 Frame = +2

Query: 257 RVPCVKKGGIRFTINGHSYFNLVLVTNVAGAGDARSVSIKGTRTG-WQAMSRNWGMNWQS 433
           RVPC K GGIRFTING+ YF+LVL+TNV GAGD R+VS+KG++T  WQ+MSRNWG NWQS
Sbjct: 154 RVPCEKGGGIRFTINGNPYFDLVLITNVGGAGDIRAVSLKGSKTDQWQSMSRNWGQNWQS 213

Query: 434 NTFLDGQCLSFRVTSSDGRTVTSNAAAPAGWQFG 535
           NT+L GQ LSF+VT SDGRTV S    P  WQFG
Sbjct: 214 NTYLRGQSLSFQVTDSDGRTVVSYDVVPHDWQFG 247

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>EXP16_ARATH (Q9M2S9) Alpha-expansin 16 precursor (AtEXPA16) (At-EXP16) (AtEx16)|
           (Ath-ExpAlpha-1.7)
          Length = 260

 Score =  140 bits (353), Expect = 2e-33
 Identities = 65/93 (69%), Positives = 73/93 (78%)
 Frame = +2

Query: 257 RVPCVKKGGIRFTINGHSYFNLVLVTNVAGAGDARSVSIKGTRTGWQAMSRNWGMNWQSN 436
           RV C K GGIRFTINGH YFNLVL+TNVAGAGD    S+KG++TGW +++RNWG NWQSN
Sbjct: 158 RVACRKSGGIRFTINGHRYFNLVLITNVAGAGDIARTSVKGSKTGWMSLTRNWGQNWQSN 217

Query: 437 TFLDGQCLSFRVTSSDGRTVTSNAAAPAGWQFG 535
             L GQ LSFRVTSSD RT TS   AP+ WQFG
Sbjct: 218 AVLVGQSLSFRVTSSDRRTSTSWNIAPSNWQFG 250

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>EXPA3_ARATH (O80932) Alpha-expansin 3 precursor (AtEXPA3) (At-EXP3) (AtEx3)|
           (Ath-ExpAlpha-1.9)
          Length = 262

 Score =  137 bits (345), Expect = 2e-32
 Identities = 66/93 (70%), Positives = 72/93 (77%)
 Frame = +2

Query: 257 RVPCVKKGGIRFTINGHSYFNLVLVTNVAGAGDARSVSIKGTRTGWQAMSRNWGMNWQSN 436
           RVPC K GGIRFT+NG  YFNLVLVTNVAGAGD   VS+KG++T W  MSRNWG NWQSN
Sbjct: 160 RVPCRKIGGIRFTVNGFRYFNLVLVTNVAGAGDINGVSVKGSKTDWVRMSRNWGQNWQSN 219

Query: 437 TFLDGQCLSFRVTSSDGRTVTSNAAAPAGWQFG 535
             L GQ LSFRVT+SD R+ TS   APA WQFG
Sbjct: 220 AVLIGQSLSFRVTASDRRSSTSWNVAPATWQFG 252

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>EXPA6_ARATH (Q38865) Alpha-expansin 6 precursor (AtEXPA6) (At-EXP6) (AtEx6)|
           (Ath-ExpAlpha-1.8)
          Length = 257

 Score =  136 bits (342), Expect = 4e-32
 Identities = 65/93 (69%), Positives = 72/93 (77%)
 Frame = +2

Query: 257 RVPCVKKGGIRFTINGHSYFNLVLVTNVAGAGDARSVSIKGTRTGWQAMSRNWGMNWQSN 436
           RVPC K+GGIRFTING  YFNLVLVTNVAGAG+   + +KGT T W  MSRNWG NWQSN
Sbjct: 155 RVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGNIVRLGVKGTHTSWMTMSRNWGQNWQSN 214

Query: 437 TFLDGQCLSFRVTSSDGRTVTSNAAAPAGWQFG 535
           + L GQ LSFRVTSSD R+ TS   APA W+FG
Sbjct: 215 SVLVGQSLSFRVTSSDRRSSTSWNIAPANWKFG 247

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>EXP11_ARATH (Q9LNU3) Alpha-expansin 11 precursor (AtEXPA11) (At-EXP11) (AtEx11)|
           (Ath-ExpAlpha-1.14)
          Length = 252

 Score =  127 bits (320), Expect = 1e-29
 Identities = 57/93 (61%), Positives = 67/93 (72%)
 Frame = +2

Query: 257 RVPCVKKGGIRFTINGHSYFNLVLVTNVAGAGDARSVSIKGTRTGWQAMSRNWGMNWQSN 436
           RV C KKGG+RF ING  YF LV + NV GAG  +SVSIKG++TGW AMSRNWG NWQSN
Sbjct: 151 RVSCYKKGGVRFRINGRDYFELVNIQNVGGAGSIKSVSIKGSKTGWLAMSRNWGANWQSN 210

Query: 437 TFLDGQCLSFRVTSSDGRTVTSNAAAPAGWQFG 535
            +LDGQ LSF +T++DG T       P+ W FG
Sbjct: 211 AYLDGQALSFSITTTDGATRVFLNVVPSSWSFG 243

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>EXP13_ARATH (Q9M9P0) Alpha-expansin 13 precursor (AtEXPA13) (At-EXP13) (AtEx13)|
           (Ath-ExpAlpha-1.22)
          Length = 266

 Score =  110 bits (274), Expect = 3e-24
 Identities = 51/93 (54%), Positives = 62/93 (66%)
 Frame = +2

Query: 257 RVPCVKKGGIRFTINGHSYFNLVLVTNVAGAGDARSVSIKGTRTGWQAMSRNWGMNWQSN 436
           R+ C K+G +RFT++G   F  VL+TNVAG+GD  +V IKG+RTGW  M RNWG NW  N
Sbjct: 163 RINCRKEGSMRFTVDGGGIFISVLITNVAGSGDIAAVKIKGSRTGWLPMGRNWGQNWHIN 222

Query: 437 TFLDGQCLSFRVTSSDGRTVTSNAAAPAGWQFG 535
             L  Q LSF VTSSD  TVTS   +P  W +G
Sbjct: 223 ADLRNQALSFEVTSSDRSTVTSYNVSPKNWNYG 255

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>EXP17_ARATH (Q9ZSI1) Putative alpha-expansin 17 precursor (AtEXPA17) (At-EXP17)|
           (AtEx17) (Ath-ExpAlpha-1.13)
          Length = 255

 Score =  109 bits (273), Expect = 4e-24
 Identities = 50/94 (53%), Positives = 68/94 (72%), Gaps = 1/94 (1%)
 Frame = +2

Query: 257 RVPCVKKGGIRFTINGHSYFNLVLVTNVAGAGDARSVSIKGTRTG-WQAMSRNWGMNWQS 433
           +V C + GG+RFTING +YF LVL++NVAG G+   V IKG+++  W+ MSRNWG N+QS
Sbjct: 153 KVGCRRSGGMRFTINGRNYFELVLISNVAGGGEISKVWIKGSKSNKWETMSRNWGANYQS 212

Query: 434 NTFLDGQCLSFRVTSSDGRTVTSNAAAPAGWQFG 535
           NT+L+GQ LSF+V  SDG    +    P+ W+FG
Sbjct: 213 NTYLNGQSLSFKVQLSDGSIKAALNVVPSNWRFG 246

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>EXP22_ARATH (Q9FL80) Putative alpha-expansin 22 precursor (AtEXPA22) (At-EXP22)|
           (AtEx22) (Ath-ExpAlpha-1.15)
          Length = 273

 Score =  106 bits (265), Expect = 4e-23
 Identities = 48/93 (51%), Positives = 60/93 (64%)
 Frame = +2

Query: 257 RVPCVKKGGIRFTINGHSYFNLVLVTNVAGAGDARSVSIKGTRTGWQAMSRNWGMNWQSN 436
           R+PC K GG++F   G+ YF +VL+ NV GAGD + V +KG +TGW  M +NWG NW + 
Sbjct: 172 RIPCSKTGGVKFETKGNPYFLMVLIYNVGGAGDIKYVQVKGNKTGWITMKKNWGQNWTTI 231

Query: 437 TFLDGQCLSFRVTSSDGRTVTSNAAAPAGWQFG 535
           T L GQ LSFRVT+SDG T       P  W FG
Sbjct: 232 TVLTGQGLSFRVTTSDGITKDFWNVMPKNWGFG 264

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>EXP26_ARATH (Q9FL78) Putative alpha-expansin 26 precursor (AtEXPA26) (At-EXP26)|
           (AtEx26) (Ath-ExpAlpha-1.16)
          Length = 279

 Score =  103 bits (258), Expect = 2e-22
 Identities = 46/93 (49%), Positives = 60/93 (64%)
 Frame = +2

Query: 257 RVPCVKKGGIRFTINGHSYFNLVLVTNVAGAGDARSVSIKGTRTGWQAMSRNWGMNWQSN 436
           R+PC K GG++F   G+ YF +VL+ NV GAGD + V +K  +TGW  M +NWG NW ++
Sbjct: 178 RIPCSKTGGVKFETKGNPYFLMVLIYNVGGAGDIKYVQVKENKTGWITMKKNWGQNWTTS 237

Query: 437 TFLDGQCLSFRVTSSDGRTVTSNAAAPAGWQFG 535
           T L GQ LSFRVT++DG T       P  W FG
Sbjct: 238 TVLTGQGLSFRVTTTDGITKDFWNVMPKNWGFG 270

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>EXPA7_ARATH (Q9LN94) Alpha-expansin 7 precursor (AtEXPA7) (At-EXP7) (AtEx7)|
           (Ath-ExpAlpha-1.26)
          Length = 262

 Score =  100 bits (250), Expect = 2e-21
 Identities = 48/94 (51%), Positives = 66/94 (70%), Gaps = 1/94 (1%)
 Frame = +2

Query: 257 RVPCVKKGGIRFTINGHSYFNLVLVTNVAGAGDARSVSIKGTRTGWQAMSRNWGMNWQSN 436
           RVPC + GG+RF   G+SY+ L+ V NV GAGD +S+++KG+RT W +MS NWG ++Q+ 
Sbjct: 159 RVPCQRSGGMRFQFQGNSYWLLIFVMNVGGAGDIKSMAVKGSRTNWISMSHNWGASYQAF 218

Query: 437 TFLDGQCLSFRVTS-SDGRTVTSNAAAPAGWQFG 535
           + L GQ LSFRVTS + G T+ +   APA W  G
Sbjct: 219 SSLYGQSLSFRVTSYTTGETIYAWNVAPANWSGG 252

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>EXP25_ARATH (Q9FL77) Putative alpha-expansin 25 precursor (AtEXPA25) (At-EXP25)|
           (AtEx25) (Ath-ExpAlpha-1.18)
          Length = 276

 Score =  100 bits (249), Expect = 3e-21
 Identities = 43/93 (46%), Positives = 58/93 (62%)
 Frame = +2

Query: 257 RVPCVKKGGIRFTINGHSYFNLVLVTNVAGAGDARSVSIKGTRTGWQAMSRNWGMNWQSN 436
           R+ C + GG++F   G+ YF ++L  NV GAGD + + +KG +TGW  M +NWG NW + 
Sbjct: 175 RISCARTGGVKFETKGNPYFLMILPYNVGGAGDIKLMQVKGDKTGWITMQKNWGQNWTTG 234

Query: 437 TFLDGQCLSFRVTSSDGRTVTSNAAAPAGWQFG 535
             L GQ +SFRVT+SDG T   N   P  W FG
Sbjct: 235 VNLTGQGISFRVTTSDGVTKDFNNVMPNNWGFG 267

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>EXP23_ARATH (Q9FL79) Alpha-expansin 23 precursor (AtEXPA23) (At-EXP23) (AtEx23)|
           (Ath-ExpAlpha-1.17)
          Length = 269

 Score =  100 bits (249), Expect = 3e-21
 Identities = 43/93 (46%), Positives = 58/93 (62%)
 Frame = +2

Query: 257 RVPCVKKGGIRFTINGHSYFNLVLVTNVAGAGDARSVSIKGTRTGWQAMSRNWGMNWQSN 436
           R+ C + GG++F   G+ YF ++L  NV GAGD + + +KG +TGW  M +NWG NW + 
Sbjct: 168 RISCARTGGVKFETKGNPYFLMILPYNVGGAGDIKLMQVKGDKTGWITMQKNWGQNWTTG 227

Query: 437 TFLDGQCLSFRVTSSDGRTVTSNAAAPAGWQFG 535
             L GQ +SFRVT+SDG T   N   P  W FG
Sbjct: 228 VNLTGQGISFRVTTSDGVTKDFNNVMPNNWGFG 260

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>EXP12_ARATH (Q9LDJ3) Alpha-expansin 12 precursor (AtEXPA12) (At-EXP12) (AtEx12)|
           (Expansin S2) (Ath-ExpAlpha-1.24)
          Length = 252

 Score =  100 bits (248), Expect = 3e-21
 Identities = 45/94 (47%), Positives = 64/94 (68%), Gaps = 1/94 (1%)
 Frame = +2

Query: 257 RVPCVKKGGIRFTINGHSYFNLVLVTNVAGAGDARSVSIKGTR-TGWQAMSRNWGMNWQS 433
           RV C ++GG+RFT+ G   FN+V+++NV G G  RSV+++G++   W  M+RNWG NWQS
Sbjct: 148 RVGCKRRGGVRFTMRGQGNFNMVMISNVGGGGSVRSVAVRGSKGKTWLQMTRNWGANWQS 207

Query: 434 NTFLDGQCLSFRVTSSDGRTVTSNAAAPAGWQFG 535
           +  L GQ LSF+VT +D +T T     P+ W FG
Sbjct: 208 SGDLRGQRLSFKVTLTDSKTQTFLNVVPSSWWFG 241

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>EXP24_ARATH (Q9FL76) Alpha-expansin 24 precursor (AtEXPA24) (At-EXP24) (AtEx24)|
           (Ath-ExpAlpha-1.19)
          Length = 312

 Score = 99.4 bits (246), Expect = 6e-21
 Identities = 45/91 (49%), Positives = 58/91 (63%)
 Frame = +2

Query: 257 RVPCVKKGGIRFTINGHSYFNLVLVTNVAGAGDARSVSIKGTRTGWQAMSRNWGMNWQSN 436
           RVPC K GG++F I G+ +F ++L  NV GAG  R++ IKGTRT W AM +NWG  W + 
Sbjct: 210 RVPCAKIGGVKFEIKGNPHFLMILPYNVGGAGAVRAMQIKGTRTQWIAMKKNWGQIWSTG 269

Query: 437 TFLDGQCLSFRVTSSDGRTVTSNAAAPAGWQ 529
             L GQCLSFR+T+SDG         P  W+
Sbjct: 270 VVLTGQCLSFRLTTSDGVMKEFIDVTPPDWK 300

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>EXP21_ARATH (Q9FL81) Putative alpha-expansin 21 precursor (AtEXPA21) (At-EXP21)|
           (AtEx21) (Ath-ExpAlpha-1.20)
          Length = 256

 Score = 99.0 bits (245), Expect = 7e-21
 Identities = 46/93 (49%), Positives = 57/93 (61%)
 Frame = +2

Query: 257 RVPCVKKGGIRFTINGHSYFNLVLVTNVAGAGDARSVSIKGTRTGWQAMSRNWGMNWQSN 436
           RVPC K GG++F + G+     +L  NV GAGD  +VS KG++T W  MSR WG NW +N
Sbjct: 155 RVPCAKTGGVKFEVKGNPNILTILPYNVGGAGDIIAVSAKGSKTAWVVMSRYWGQNWTTN 214

Query: 437 TFLDGQCLSFRVTSSDGRTVTSNAAAPAGWQFG 535
             L GQ +S RVT+SDG T       PA W FG
Sbjct: 215 VNLTGQSVSLRVTTSDGITKDFTDVMPASWGFG 247

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>EXP20_ARATH (Q9SZM1) Alpha-expansin 20 precursor (AtEXPA20) (At-EXP20) (AtEx20)|
           (Ath-ExpAlpha-1.23)
          Length = 256

 Score = 95.9 bits (237), Expect = 6e-20
 Identities = 44/93 (47%), Positives = 60/93 (64%)
 Frame = +2

Query: 257 RVPCVKKGGIRFTINGHSYFNLVLVTNVAGAGDARSVSIKGTRTGWQAMSRNWGMNWQSN 436
           RV C ++GG+RF+++G S+F  VL++NV   G+   V +KG  T W  M+RNWG NW S+
Sbjct: 154 RVKCGRRGGLRFSLSGSSHFFQVLISNVGLDGEVVGVKVKGHTTAWIPMARNWGQNWHSS 213

Query: 437 TFLDGQCLSFRVTSSDGRTVTSNAAAPAGWQFG 535
             L GQ LSF VT   G+T+ S   AP  W+FG
Sbjct: 214 LDLIGQSLSFEVTLKGGKTIASYDVAPPYWRFG 246

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>EXP18_ARATH (Q9LQ07) Alpha-expansin 18 precursor (AtEXPA18) (At-EXP18) (AtEx18)|
           (Ath-ExpAlpha-1.25)
          Length = 257

 Score = 94.7 bits (234), Expect = 1e-19
 Identities = 48/94 (51%), Positives = 63/94 (67%), Gaps = 1/94 (1%)
 Frame = +2

Query: 257 RVPCVKKGGIRFTINGHSYFNLVLVTNVAGAGDARSVSIKGTRTGWQAMSRNWGMNWQSN 436
           RV C K GGIRF   G+ Y+ LV V NV G GD +++++KG+RTGW  MS NWG ++Q+ 
Sbjct: 154 RVACKKIGGIRFKFEGNGYWLLVYVMNVGGPGDIKTMAVKGSRTGWINMSHNWGASYQAF 213

Query: 437 TFLDGQCLSFRVTSSDGR-TVTSNAAAPAGWQFG 535
           + L GQ LSFR+TS   R T+ +  AAPA W  G
Sbjct: 214 SSLYGQSLSFRLTSYTTRQTIYAYNAAPASWSAG 247

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>EXPB2_ARATH (Q9SHY6) Putative beta-expansin 2 precursor (AtEXPB2) (At-EXPB2)|
           (Ath-ExpBeta-1.4)
          Length = 273

 Score = 41.6 bits (96), Expect = 0.001
 Identities = 27/75 (36%), Positives = 40/75 (53%), Gaps = 4/75 (5%)
 Frame = +2

Query: 323 VLVTNVAGAGDARSVSIKGTRTG--WQAMSRNWGMNWQSNTFLDGQC-LSFRVTSSD-GR 490
           VLV  V G G+   + +K       W +MS++WG  W+ +     +  LS RVTS + G+
Sbjct: 190 VLVAYVNGDGEIGRIELKQALDSDKWLSMSQSWGAVWKLDVSSPLRAPLSLRVTSLESGK 249

Query: 491 TVTSNAAAPAGWQFG 535
           TV ++   PA WQ G
Sbjct: 250 TVVASNVIPANWQPG 264

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>MPAO1_ORYSA (Q40638) Major pollen allergen Ory s 1 precursor (Ory s I)|
          Length = 263

 Score = 34.7 bits (78), Expect = 0.17
 Identities = 25/68 (36%), Positives = 35/68 (51%), Gaps = 3/68 (4%)
 Frame = +2

Query: 323 VLVTNVAGAGDARSVSIKGTRTG-WQAMSRNWGMNWQSNT--FLDGQCLSFRVTSSDGRT 493
           +LV  VAG GD   V IK   +  W+A+  +WG  W+ +T   L G   S RVT+   R 
Sbjct: 182 LLVKYVAGDGDVVEVEIKEKGSEEWKALKESWGAIWRIDTPKPLKGP-FSVRVTTEGARR 240

Query: 494 VTSNAAAP 517
            ++  A P
Sbjct: 241 SSAEDAIP 248

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>EXPB1_ARATH (Q9SKU2) Beta-expansin 1 precursor (AtEXPB1) (At-EXPB1)|
           (Ath-ExpBeta-1.5)
          Length = 271

 Score = 33.1 bits (74), Expect = 0.50
 Identities = 27/98 (27%), Positives = 47/98 (47%), Gaps = 8/98 (8%)
 Frame = +2

Query: 257 RVPCVKKG-GIRFTINGHS--YFNLVLVTNVAGAGDARSVSIKGTRTG-WQAMSRNWGMN 424
           R  C  +G  I F +N  S  Y+  +L+    G GD  S+ I+   +  W +M   WG N
Sbjct: 161 RTACKYRGKNIAFHVNAGSTDYWLSLLIEYEDGEGDIGSMHIRQAGSKEWISMKHIWGAN 220

Query: 425 WQSNTFLDGQC---LSFRVTS-SDGRTVTSNAAAPAGW 526
           W     ++G      S ++T+ S+ +T+++    P+ W
Sbjct: 221 W---CIVEGPLKGPFSVKLTTLSNNKTLSATDVIPSNW 255

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>EXPL3_ARATH (Q9LZT5) Expansin-like 3 precursor (AtEXPL3) (At-EXPL3)|
           (Ath-ExpBeta-2.3)
          Length = 263

 Score = 33.1 bits (74), Expect = 0.50
 Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 3/51 (5%)
 Frame = +2

Query: 392 WQAMSRNWGMNWQSNTFLDGQCLSFRVTSS---DGRTVTSNAAAPAGWQFG 535
           W  MSR+ G  W ++    G  L F+ T +   DG+TV S    PA W  G
Sbjct: 189 WSYMSRSHGAVWATDKVPTG-ALQFKFTVTGGYDGKTVWSKRVLPANWNSG 238

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>EXPL2_ARATH (Q9SVE5) Expansin-like 2 precursor (AtEXPL2) (At-EXPL2)|
           (Ath-ExpBeta-2.2)
          Length = 265

 Score = 32.3 bits (72), Expect = 0.86
 Identities = 31/102 (30%), Positives = 47/102 (46%), Gaps = 9/102 (8%)
 Frame = +2

Query: 257 RVPCV---KKGGIRFTINGHSYFNLVLVTNVAGAGDARSVSIKGTRTG---WQAMSRNWG 418
           RVPC    KK  +R   +  +  N + +  +   G    V+I   + G   W  M+R+ G
Sbjct: 140 RVPCDYGNKKMNVRVEESSKNP-NYLAIKLLYQGGQTEVVAIYIAQVGSSHWSYMTRSHG 198

Query: 419 MNWQSNTFLDGQCLSFR--VTSS-DGRTVTSNAAAPAGWQFG 535
             W ++   +G  L FR  VT+  DG+ V S    PA W+ G
Sbjct: 199 AVWVTDKVPNG-ALQFRFVVTAGYDGKMVWSQRVLPANWEAG 239

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>NELF_RAT (Q9EPI6) Nasal embryonic luteinizing hormone-releasing hormone|
           factor (Nasal embryonic LHRH factor) (Juxtasynaptic
           attractor of caldendrin on dendritic boutons protein)
           (Jacob protein)
          Length = 532

 Score = 31.6 bits (70), Expect = 1.5
 Identities = 17/45 (37%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
 Frame = +1

Query: 202 TVCMLPLLTDASRVELIEQGAV---REEGGHPVHHQRPLLLQPGA 327
           T+   P L   S  E IE   V   R+   HP HH +PL   PG+
Sbjct: 103 TISREPALLPGSEAEAIELAVVKGRRQRERHPHHHSQPLRASPGS 147

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>NELF_MOUSE (Q99NF2) Nasal embryonic luteinizing hormone-releasing hormone|
           factor (Nasal embryonic LHRH factor) (Juxtasynaptic
           attractor of caldendrin on dendritic boutons protein)
           (Jacob protein)
          Length = 532

 Score = 31.6 bits (70), Expect = 1.5
 Identities = 17/45 (37%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
 Frame = +1

Query: 202 TVCMLPLLTDASRVELIEQGAV---REEGGHPVHHQRPLLLQPGA 327
           T+   P L   S  E IE   V   R+   HP HH +PL   PG+
Sbjct: 103 TISREPALLPGSEAEAIELAVVKGRRQRERHPHHHSQPLRASPGS 147

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>EXPB3_ARATH (Q9M0I2) Beta-expansin 3 precursor (AtEXPB3) (At-EXPB3)|
           (Ath-ExpBeta-1.6)
          Length = 264

 Score = 31.6 bits (70), Expect = 1.5
 Identities = 30/96 (31%), Positives = 41/96 (42%), Gaps = 6/96 (6%)
 Frame = +2

Query: 257 RVPCVKKG-GIRFTINGHS--YFNLVLVTNVAGAGDARSVSIK--GTRTGWQAMSRNWGM 421
           R  C  +G  I F +N  S  ++  +LV    G GD  S+ I+  G R  W  M   WG 
Sbjct: 154 RTACKYRGKNIAFHVNEGSTDFWLSLLVEFEDGEGDIGSMHIRQAGARE-WLEMKHVWGA 212

Query: 422 NW-QSNTFLDGQCLSFRVTSSDGRTVTSNAAAPAGW 526
           NW      L G       T S G+T+++    P  W
Sbjct: 213 NWCIIGGPLKGPFSIKLTTLSAGKTLSATDVVPRNW 248

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>RLUD_NITEU (Q82WZ5) Ribosomal large subunit pseudouridine synthase D (EC|
           5.4.99.-) (rRNA-uridine isomerase D) (rRNA
           pseudouridylate synthase D)
          Length = 344

 Score = 30.8 bits (68), Expect = 2.5
 Identities = 17/69 (24%), Positives = 28/69 (40%), Gaps = 8/69 (11%)
 Frame = +1

Query: 277 GGHPVHHQRPLLLQPGAG--------DQXXXXXXXXXXVHQGHAHRLAGHVPQLGHELAE 432
           G HP+H  R  ++Q G          ++          +  G  H++  H+  +GH LA 
Sbjct: 215 GRHPIHRTRMAVVQNGKPARTHYRVLEKFTASTLLHCSLETGRTHQIRVHLLSIGHPLAG 274

Query: 433 QHLPGRPVP 459
             + GR  P
Sbjct: 275 DPVYGRTSP 283

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>REXO3_SCHPO (Q9P7H2) RNA exonuclease 3 (EC 3.1.-.-)|
          Length = 540

 Score = 30.8 bits (68), Expect = 2.5
 Identities = 16/54 (29%), Positives = 22/54 (40%), Gaps = 5/54 (9%)
 Frame = +3

Query: 18  GLKNEDTPGTAVGSVHKFRWGHAADLIRCTPIG-----TATTPLEHCRLQCSAC 164
           G+K  D+ G  +   H F++ H   L    P       T +  L HC L C  C
Sbjct: 337 GVKEGDSSGCIIEDNHVFKYRHLPYLASVHPFSYLPDSTNSKQLSHCALDCELC 390

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>YR24_CAEEL (Q09341) Hypothetical protein W02B3.4 in chromosome III|
          Length = 387

 Score = 30.4 bits (67), Expect = 3.3
 Identities = 20/66 (30%), Positives = 33/66 (50%)
 Frame = -3

Query: 450 PSRKVLLCQFMPQLRDMACQPVRVPLMDTERASPAPATLVTSTRLK*EWPLMVNRMPPFF 271
           P+   L  +F  + + + C  + +P   ++   PA  +    +RL+ E  L+ NRM PF 
Sbjct: 153 PADIKLFVEFWKRAKFVNCMNLHIPRAGSKVRMPARPSSEVLSRLRDE--LIENRMFPFL 210

Query: 270 THGTLL 253
             GTLL
Sbjct: 211 NGGTLL 216

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>IMP1_YEAST (P28627) Mitochondrial inner membrane protease subunit 1 (EC|
           3.4.99.-)
          Length = 189

 Score = 29.3 bits (64), Expect = 7.3
 Identities = 13/25 (52%), Positives = 14/25 (56%), Gaps = 1/25 (4%)
 Frame = +2

Query: 392 WQAMSRN-WGMNWQSNTFLDGQCLS 463
           W    RN WG  W +NTFLD Q  S
Sbjct: 164 WDGSIRNIWGFKWINNTFLDVQAKS 188

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>MMPL7_MYCTU (P65370) Putative membrane protein mmpL7|
          Length = 920

 Score = 29.3 bits (64), Expect = 7.3
 Identities = 16/35 (45%), Positives = 21/35 (60%)
 Frame = -2

Query: 160 ALHCRRQCSSGVVAVPIGVHRIKSAAWPHRNLWTE 56
           AL    Q S  +V VP GV +++SAAWP    WT+
Sbjct: 448 ALIAINQVSHRLVEVP-GVRKVESAAWPAGVPWTD 481

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>MMPL7_MYCBO (P65371) Putative membrane protein mmpL7|
          Length = 920

 Score = 29.3 bits (64), Expect = 7.3
 Identities = 16/35 (45%), Positives = 21/35 (60%)
 Frame = -2

Query: 160 ALHCRRQCSSGVVAVPIGVHRIKSAAWPHRNLWTE 56
           AL    Q S  +V VP GV +++SAAWP    WT+
Sbjct: 448 ALIAINQVSHRLVEVP-GVRKVESAAWPAGVPWTD 481

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>EXPL1_ARATH (Q9LZT4) Expansin-like 1 precursor (AtEXPL1) (At-EXPL1)|
           (Ath-ExpBeta-2.1)
          Length = 265

 Score = 28.9 bits (63), Expect = 9.5
 Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
 Frame = +2

Query: 377 GTRTGWQAMSRNWGMNWQSNTFLDGQC-LSFRVTSS-DGRTVTSNAAAPAGWQFG 535
           G+   W  M+R+ G  W ++    G     F VT   DG+ + S +  P+ W+ G
Sbjct: 185 GSSPNWGYMTRSHGAVWVTDKVPTGAIQFRFVVTGGYDGKMIWSQSVLPSNWEAG 239

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>SPTB1_HUMAN (P11277) Spectrin beta chain, erythrocyte (Beta-I spectrin)|
          Length = 2136

 Score = 28.9 bits (63), Expect = 9.5
 Identities = 13/40 (32%), Positives = 20/40 (50%)
 Frame = +2

Query: 371  IKGTRTGWQAMSRNWGMNWQSNTFLDGQCLSFRVTSSDGR 490
            ++G  TGW A+    G  W+S +    QCL F+    D +
Sbjct: 1142 LEGLDTGWDAL----GRMWESRSHTLAQCLGFQEFQKDAK 1177

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>VP4_ROTGI (P15155) Outer capsid protein VP4 (Hemagglutinin) (Outer layer|
           protein VP4)
          Length = 751

 Score = 28.9 bits (63), Expect = 9.5
 Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
 Frame = -3

Query: 354 SPAPAT-LVTSTRLK*EWPLMVNRMPPFFTHGTLLDQFNTRRVSEKR*HAHGESEVAT 184
           SP  AT ++  T L+     ++NRMP  +  G + +   TR++ ++R H      VAT
Sbjct: 552 SPIGATKIIDKTTLETPQLSVINRMPEEYELGIIYNSMRTRKLIDERKHDFDTFAVAT 609


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 69,462,505
Number of Sequences: 219361
Number of extensions: 1440628
Number of successful extensions: 4341
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 4211
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4335
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4200495993
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result