ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags17d08 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AB040769.1| Hordeum vulgare mRNA for endo-1,4-beta-glucanase Cel1, complete cds Length = 2442 Score = 1172 bits (591), Expect = 0.0 Identities = 605/607 (99%), Gaps = 2/607 (0%) Strand = Plus / Plus Query: 1 aactatggnagtgttcacctgggnatgacaagcttccaggatctcaggttcttctcagca 60 |||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 1291 aactatgg-agtgttcacctggg-atgacaagcttccaggatctcaggttcttctcagca 1348 Query: 61 ggttgcggctcttcctaagcccagggtatccttatgaagaaatattaaggacattccaca 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1349 ggttgcggctcttcctaagcccagggtatccttatgaagaaatattaaggacattccaca 1408 Query: 121 accaaactgacaatgtcatgtgctcatatttaccagtattcaattcattcaacttcacta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1409 accaaactgacaatgtcatgtgctcatatttaccagtattcaattcattcaacttcacta 1468 Query: 181 aaggaggactgatacaactcaaccatggagggcctcaaccacttcagtacgtcgtcaatg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1469 aaggaggactgatacaactcaaccatggagggcctcaaccacttcagtacgtcgtcaatg 1528 Query: 241 cagcattccttgcctctctgtatgctgattatctggacactgcagatacaccagggtggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1529 cagcattccttgcctctctgtatgctgattatctggacactgcagatacaccagggtggt 1588 Query: 301 attgtggacctaatttctataccacagatgtcctccgcaagtttgcaaagtcacagcttg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1589 attgtggacctaatttctataccacagatgtcctccgcaagtttgcaaagtcacagcttg 1648 Query: 361 attacattctaggcaagaacccacaaaagatgagctacgtcgtgggttttggaaagaagt 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1649 attacattctaggcaagaacccacaaaagatgagctacgtcgtgggttttggaaagaagt 1708 Query: 421 accccaagcgtgttcatcacagaggggcatcaatccctcataacggtgtcaaatatggat 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1709 accccaagcgtgttcatcacagaggggcatcaatccctcataacggtgtcaaatatggat 1768 Query: 481 gcaaaggaggttttaaatggagagagtctaagaaagcaaaccctaatatcctcgtcggag 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1769 gcaaaggaggttttaaatggagagagtctaagaaagcaaaccctaatatcctcgtcggag 1828 Query: 541 caatggttgctgggcctgacaagcatgatggcttcaaagatatccgcacaaattacaatt 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1829 caatggttgctgggcctgacaagcatgatggcttcaaagatatccgcacaaattacaatt 1888 Query: 601 acacaga 607 ||||||| Sbjct: 1889 acacaga 1895
>gb|AY091512.1| Triticum aestivum endo-1,4-beta-glucanase mRNA, complete cds Length = 2196 Score = 1053 bits (531), Expect = 0.0 Identities = 590/607 (97%), Gaps = 2/607 (0%) Strand = Plus / Plus Query: 1 aactatggnagtgttcacctgggnatgacaagcttccaggatctcaggttcttctcagca 60 |||||||| |||||| ||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 1105 aactatgg-agtgtttacctggg-atgacaagcttccaggatctcaggttcttctcagca 1162 Query: 61 ggttgcggctcttcctaagcccagggtatccttatgaagaaatattaaggacattccaca 120 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 1163 ggttgcggctcttcctaagtccagggtatccttatgaagaaatattaaggacattccaca 1222 Query: 121 accaaactgacaatgtcatgtgctcatatttaccagtattcaattcattcaacttcacta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1223 accaaactgacaatgtcatgtgctcatatttaccagtattcaattcattcaacttcacta 1282 Query: 181 aaggaggactgatacaactcaaccatggagggcctcaaccacttcagtacgtcgtcaatg 240 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1283 aaggaggattgatacaactcaaccatggagggcctcaaccacttcagtacgtcgtcaatg 1342 Query: 241 cagcattccttgcctctctgtatgctgattatctggacactgcagatacaccagggtggt 300 |||| |||||||||||| |||||||||||||||||||||| |||||||||||| |||||| Sbjct: 1343 cagctttccttgcctctttgtatgctgattatctggacaccgcagatacaccaaggtggt 1402 Query: 301 attgtggacctaatttctataccacagatgtcctccgcaagtttgcaaagtcacagcttg 360 ||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 1403 attgtagacctaatttctataccacagatgtcctccgtaagtttgcaaagtcacagcttg 1462 Query: 361 attacattctaggcaagaacccacaaaagatgagctacgtcgtgggttttggaaagaagt 420 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1463 attacatcctaggcaagaacccacaaaagatgagctacgtcgtgggttttggaaagaagt 1522 Query: 421 accccaagcgtgttcatcacagaggggcatcaatccctcataacggtgtcaaatatggat 480 |||| ||||||||||||||||||||||||||||||||||||||||||||||| || |||| Sbjct: 1523 acccgaagcgtgttcatcacagaggggcatcaatccctcataacggtgtcaagtacggat 1582 Query: 481 gcaaaggaggttttaaatggagagagtctaagaaagcaaaccctaatatcctcgtcggag 540 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 1583 gcaaaggaggttttaaatggagagagtttaagaaagcaaaccctaatatcctcgtcggag 1642 Query: 541 caatggttgctgggcctgacaagcatgatggcttcaaagatatccgcacaaattacaatt 600 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1643 caatggttgctggccctgacaagcatgatggcttcaaagatatccgcacaaattacaatt 1702 Query: 601 acacaga 607 ||||||| Sbjct: 1703 acacaga 1709
>ref|XM_469632.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2313 Score = 555 bits (280), Expect = e-155 Identities = 505/580 (87%) Strand = Plus / Plus Query: 25 atgacaagcttccaggatctcaggttcttctcagcaggttgcggctcttcctaagcccag 84 ||||||||||||||||| ||||||||||||| |||||||||||||| |||||||| || | Sbjct: 1234 atgacaagcttccaggagctcaggttcttctgagcaggttgcggcttttcctaagtcctg 1293 Query: 85 ggtatccttatgaagaaatattaaggacattccacaaccaaactgacaatgtcatgtgct 144 | |||||||| ||||||||| | || ||||| ||||||||||| |||||||| ||||||| Sbjct: 1294 gatatccttacgaagaaatactgagaacatttcacaaccaaacagacaatgttatgtgct 1353 Query: 145 catatttaccagtattcaattcattcaacttcactaaaggaggactgatacaactcaacc 204 | ||| | || | | ||||||||||||||| || ||||||||| ||||||| ||||||| Sbjct: 1354 cgtatctgccgatgtacaattcattcaactttaccaaaggaggaatgatacagctcaacc 1413 Query: 205 atggagggcctcaaccacttcagtacgtcgtcaatgcagcattccttgcctctctgtatg 264 | ||| ||||||| ||||||||||| || |||||||| || |||||||||||||| || Sbjct: 1414 acggaaggcctcagccacttcagtatgttgtcaatgcggctttccttgcctctctataca 1473 Query: 265 ctgattatctggacactgcagatacaccagggtggtattgtggacctaatttctatacca 324 ||||| ||||| ||||||||||||| ||||||||||||||||||| |||||| || | Sbjct: 1474 gcgattacctggatgctgcagatacacctgggtggtattgtggacctactttctacacta 1533 Query: 325 cagatgtcctccgcaagtttgcaaagtcacagcttgattacattctaggcaagaacccac 384 |||| ||||||||||| ||||||| ||||||||| ||||| | ||||| |||||||||| Sbjct: 1534 cagaagtcctccgcaaatttgcaaggtcacagctcgattatgtcctaggtaagaacccac 1593 Query: 385 aaaagatgagctacgtcgtgggttttggaaagaagtaccccaagcgtgttcatcacagag 444 |||||||||||||| |||||||||||||| |||||||||||||| | ||||||||||| Sbjct: 1594 tgaagatgagctacgttgtgggttttggaaacaagtaccccaagcgcgctcatcacagag 1653 Query: 445 gggcatcaatccctcataacggtgtcaaatatggatgcaaaggaggttttaaatggagag 504 | ||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| | Sbjct: 1654 gtgcatcaatccctcataatggtgtcaaatatggatgcaaaggaggctttaaatggaggg 1713 Query: 505 agtctaagaaagcaaaccctaatatcctcgtcggagcaatggttgctgggcctgacaagc 564 || ||||||| |||| ||||||||||| | |||||| |||||||||| ||||| | || Sbjct: 1714 agactaagaagccaaatcctaatatccttattggagcactggttgctggccctgataggc 1773 Query: 565 atgatggcttcaaagatatccgcacaaattacaattacac 604 ||||||||||||||||| |||| ||||| ||||||||||| Sbjct: 1774 atgatggcttcaaagatgtccgtacaaactacaattacac 1813
>dbj|AK104929.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-044-D09, full insert sequence Length = 1963 Score = 555 bits (280), Expect = e-155 Identities = 505/580 (87%) Strand = Plus / Plus Query: 25 atgacaagcttccaggatctcaggttcttctcagcaggttgcggctcttcctaagcccag 84 ||||||||||||||||| ||||||||||||| |||||||||||||| |||||||| || | Sbjct: 910 atgacaagcttccaggagctcaggttcttctgagcaggttgcggcttttcctaagtcctg 969 Query: 85 ggtatccttatgaagaaatattaaggacattccacaaccaaactgacaatgtcatgtgct 144 | |||||||| ||||||||| | || ||||| ||||||||||| |||||||| ||||||| Sbjct: 970 gatatccttacgaagaaatactgagaacatttcacaaccaaacagacaatgttatgtgct 1029 Query: 145 catatttaccagtattcaattcattcaacttcactaaaggaggactgatacaactcaacc 204 | ||| | || | | ||||||||||||||| || ||||||||| ||||||| ||||||| Sbjct: 1030 cgtatctgccgatgtacaattcattcaactttaccaaaggaggaatgatacagctcaacc 1089 Query: 205 atggagggcctcaaccacttcagtacgtcgtcaatgcagcattccttgcctctctgtatg 264 | ||| ||||||| ||||||||||| || |||||||| || |||||||||||||| || Sbjct: 1090 acggaaggcctcagccacttcagtatgttgtcaatgcggctttccttgcctctctataca 1149 Query: 265 ctgattatctggacactgcagatacaccagggtggtattgtggacctaatttctatacca 324 ||||| ||||| ||||||||||||| ||||||||||||||||||| |||||| || | Sbjct: 1150 gcgattacctggatgctgcagatacacctgggtggtattgtggacctactttctacacta 1209 Query: 325 cagatgtcctccgcaagtttgcaaagtcacagcttgattacattctaggcaagaacccac 384 |||| ||||||||||| ||||||| ||||||||| ||||| | ||||| |||||||||| Sbjct: 1210 cagaagtcctccgcaaatttgcaaggtcacagctcgattatgtcctaggtaagaacccac 1269 Query: 385 aaaagatgagctacgtcgtgggttttggaaagaagtaccccaagcgtgttcatcacagag 444 |||||||||||||| |||||||||||||| |||||||||||||| | ||||||||||| Sbjct: 1270 tgaagatgagctacgttgtgggttttggaaacaagtaccccaagcgcgctcatcacagag 1329 Query: 445 gggcatcaatccctcataacggtgtcaaatatggatgcaaaggaggttttaaatggagag 504 | ||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| | Sbjct: 1330 gtgcatcaatccctcataatggtgtcaaatatggatgcaaaggaggctttaaatggaggg 1389 Query: 505 agtctaagaaagcaaaccctaatatcctcgtcggagcaatggttgctgggcctgacaagc 564 || ||||||| |||| ||||||||||| | |||||| |||||||||| ||||| | || Sbjct: 1390 agactaagaagccaaatcctaatatccttattggagcactggttgctggccctgataggc 1449 Query: 565 atgatggcttcaaagatatccgcacaaattacaattacac 604 ||||||||||||||||| |||| ||||| ||||||||||| Sbjct: 1450 atgatggcttcaaagatgtccgtacaaactacaattacac 1489
>dbj|AK070408.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023054M04, full insert sequence Length = 2397 Score = 555 bits (280), Expect = e-155 Identities = 505/580 (87%) Strand = Plus / Plus Query: 25 atgacaagcttccaggatctcaggttcttctcagcaggttgcggctcttcctaagcccag 84 ||||||||||||||||| ||||||||||||| |||||||||||||| |||||||| || | Sbjct: 1335 atgacaagcttccaggagctcaggttcttctgagcaggttgcggcttttcctaagtcctg 1394 Query: 85 ggtatccttatgaagaaatattaaggacattccacaaccaaactgacaatgtcatgtgct 144 | |||||||| ||||||||| | || ||||| ||||||||||| |||||||| ||||||| Sbjct: 1395 gatatccttacgaagaaatactgagaacatttcacaaccaaacagacaatgttatgtgct 1454 Query: 145 catatttaccagtattcaattcattcaacttcactaaaggaggactgatacaactcaacc 204 | ||| | || | | ||||||||||||||| || ||||||||| ||||||| ||||||| Sbjct: 1455 cgtatctgccgatgtacaattcattcaactttaccaaaggaggaatgatacagctcaacc 1514 Query: 205 atggagggcctcaaccacttcagtacgtcgtcaatgcagcattccttgcctctctgtatg 264 | ||| ||||||| ||||||||||| || |||||||| || |||||||||||||| || Sbjct: 1515 acggaaggcctcagccacttcagtatgttgtcaatgcggctttccttgcctctctataca 1574 Query: 265 ctgattatctggacactgcagatacaccagggtggtattgtggacctaatttctatacca 324 ||||| ||||| ||||||||||||| ||||||||||||||||||| |||||| || | Sbjct: 1575 gcgattacctggatgctgcagatacacctgggtggtattgtggacctactttctacacta 1634 Query: 325 cagatgtcctccgcaagtttgcaaagtcacagcttgattacattctaggcaagaacccac 384 |||| ||||||||||| ||||||| ||||||||| ||||| | ||||| |||||||||| Sbjct: 1635 cagaagtcctccgcaaatttgcaaggtcacagctcgattatgtcctaggtaagaacccac 1694 Query: 385 aaaagatgagctacgtcgtgggttttggaaagaagtaccccaagcgtgttcatcacagag 444 |||||||||||||| |||||||||||||| |||||||||||||| | ||||||||||| Sbjct: 1695 tgaagatgagctacgttgtgggttttggaaacaagtaccccaagcgcgctcatcacagag 1754 Query: 445 gggcatcaatccctcataacggtgtcaaatatggatgcaaaggaggttttaaatggagag 504 | ||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| | Sbjct: 1755 gtgcatcaatccctcataatggtgtcaaatatggatgcaaaggaggctttaaatggaggg 1814 Query: 505 agtctaagaaagcaaaccctaatatcctcgtcggagcaatggttgctgggcctgacaagc 564 || ||||||| |||| ||||||||||| | |||||| |||||||||| ||||| | || Sbjct: 1815 agactaagaagccaaatcctaatatccttattggagcactggttgctggccctgataggc 1874 Query: 565 atgatggcttcaaagatatccgcacaaattacaattacac 604 ||||||||||||||||| |||| ||||| ||||||||||| Sbjct: 1875 atgatggcttcaaagatgtccgtacaaactacaattacac 1914
>gb|BT023982.1| Zea mays clone EL01N0414A03 mRNA sequence Length = 1870 Score = 460 bits (232), Expect = e-126 Identities = 493/580 (85%) Strand = Plus / Plus Query: 25 atgacaagcttccaggatctcaggttcttctcagcaggttgcggctcttcctaagcccag 84 ||||||| ||||||||| ||||||||||||||||||||||| | ||||||||||| |||| Sbjct: 818 atgacaaacttccaggagctcaggttcttctcagcaggttgagactcttcctaagtccag 877 Query: 85 ggtatccttatgaagaaatattaaggacattccacaaccaaactgacaatgtcatgtgct 144 |||| ||||| ||||||||| | ||||||||||||||||| || |||||||| ||||||| Sbjct: 878 ggtacccttacgaagaaatactgaggacattccacaaccagaccgacaatgttatgtgct 937 Query: 145 catatttaccagtattcaattcattcaacttcactaaaggaggactgatacaactcaacc 204 ||||| | || |||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 938 catatctgcctctattcaattcattcaacttcactaaaggaggactaatacaactcaacc 997 Query: 205 atggagggcctcaaccacttcagtacgtcgtcaatgcagcattccttgcctctctgtatg 264 ||||| ||||||| ||||||||||| | ||||| ||||| |||||||| ||||| || Sbjct: 998 atggaaggcctcagccacttcagtatgctgtcaacgcagctttccttgcttctctataca 1057 Query: 265 ctgattatctggacactgcagatacaccagggtggtattgtggacctaatttctatacca 324 || ||||| || ||||||| || || |||||||| || |||||||| ||||| |||| Sbjct: 1058 gcgactatcttgaagctgcagacacgcctgggtggtactgcggacctaacttctacacca 1117 Query: 325 cagatgtcctccgcaagtttgcaaagtcacagcttgattacattctaggcaagaacccac 384 |||| ||||||||||||||||| | ||||||||| || ||||| || |||||||||||| Sbjct: 1118 cagaagtcctccgcaagtttgccaggtcacagctcgactacatccttggcaagaacccat 1177 Query: 385 aaaagatgagctacgtcgtgggttttggaaagaagtaccccaagcgtgttcatcacagag 444 |||||||||||||| |||||||| ||||| |||||||| ||||| ||||||||||| Sbjct: 1178 tgaagatgagctacgttgtgggtttcggaaacaagtacccgaagcgccctcatcacagag 1237 Query: 445 gggcatcaatccctcataacggtgtcaaatatggatgcaaaggaggttttaaatggagag 504 | || || || ||||| ||||| ||||| ||||| ||||||||||||| || ||||| | Sbjct: 1238 gcgcgtcgatacctcacaacggcgtcaagtatgggtgcaaaggaggttacaagtggaggg 1297 Query: 505 agtctaagaaagcaaaccctaatatcctcgtcggagcaatggttgctgggcctgacaagc 564 | | ||||| ||||||||||| ||||| |||||||||||||| ||||| || |||| || Sbjct: 1298 acacaaagaaggcaaaccctaacatccttgtcggagcaatggtggctggccccgacaggc 1357 Query: 565 atgatggcttcaaagatatccgcacaaattacaattacac 604 ||||||| ||||||| ||||||| || ||||| ||||| Sbjct: 1358 gcgatggctacaaagatgtccgcacgaactacaactacac 1397
>gb|AY104195.1| Zea mays PCO094435 mRNA sequence Length = 2019 Score = 460 bits (232), Expect = e-126 Identities = 493/580 (85%) Strand = Plus / Plus Query: 25 atgacaagcttccaggatctcaggttcttctcagcaggttgcggctcttcctaagcccag 84 ||||||| ||||||||| ||||||||||||||||||||||||| ||||||||||| |||| Sbjct: 884 atgacaaacttccaggagctcaggttcttctcagcaggttgcgactcttcctaagtccag 943 Query: 85 ggtatccttatgaagaaatattaaggacattccacaaccaaactgacaatgtcatgtgct 144 |||| ||||| ||||||||| | |||||||||||||||||||| |||||||| ||||||| Sbjct: 944 ggtacccttacgaagaaatactgaggacattccacaaccaaaccgacaatgttatgtgct 1003 Query: 145 catatttaccagtattcaattcattcaacttcactaaaggaggactgatacaactcaacc 204 ||||| | || |||||||||||||||||||||||||||||||| | ||||||||||||| Sbjct: 1004 catatctgcctctattcaattcattcaacttcactaaaggaggattaatacaactcaacc 1063 Query: 205 atggagggcctcaaccacttcagtacgtcgtcaatgcagcattccttgcctctctgtatg 264 ||||| ||||||| ||||||||||| | ||||| ||||| |||||||| ||||| || Sbjct: 1064 atggaaggcctcagccacttcagtatgctgtcaacgcagctttccttgcttctctataca 1123 Query: 265 ctgattatctggacactgcagatacaccagggtggtattgtggacctaatttctatacca 324 || ||||| || ||||||| || || |||||||| || |||||||| ||||| |||| Sbjct: 1124 gcgactatcttgaagctgcagacacgcctgggtggtactgcggacctaacttctacacca 1183 Query: 325 cagatgtcctccgcaagtttgcaaagtcacagcttgattacattctaggcaagaacccac 384 |||| ||||||||||||||||| | ||||||||| || ||||| || || ||||||||| Sbjct: 1184 cagaagtcctccgcaagtttgccaggtcacagctcgactacatccttggaaagaacccat 1243 Query: 385 aaaagatgagctacgtcgtgggttttggaaagaagtaccccaagcgtgttcatcacagag 444 |||||||||||||| |||||||| ||||| |||||||| ||||| ||||||||||| Sbjct: 1244 tgaagatgagctacgttgtgggtttcggaaacaagtacccgaagcgccctcatcacagag 1303 Query: 445 gggcatcaatccctcataacggtgtcaaatatggatgcaaaggaggttttaaatggagag 504 | || || || ||||| ||||| ||||| ||||| ||||||||||||| || ||||| | Sbjct: 1304 gcgcgtcgatacctcacaacggcgtcaagtatgggtgcaaaggaggttacaagtggaggg 1363 Query: 505 agtctaagaaagcaaaccctaatatcctcgtcggagcaatggttgctgggcctgacaagc 564 | | ||||| ||||||||||| ||||| |||||||||||||| ||||| || |||| || Sbjct: 1364 acacaaagaaggcaaaccctaacatccttgtcggagcaatggtggctggccccgacaggc 1423 Query: 565 atgatggcttcaaagatatccgcacaaattacaattacac 604 ||||||| ||||||| ||||||| || ||||| ||||| Sbjct: 1424 gcgatggctacaaagatgtccgcacgaactacaactacac 1463
>gb|BT017857.1| Zea mays clone EL01N0511D04.c mRNA sequence Length = 894 Score = 323 bits (163), Expect = 4e-85 Identities = 397/475 (83%) Strand = Plus / Plus Query: 130 acaatgtcatgtgctcatatttaccagtattcaattcattcaacttcactaaaggaggac 189 ||||||| |||||||||||| | || ||||||| | ||||||||||||||||||||||| Sbjct: 12 acaatgttatgtgctcatatctgcctctattcaacttattcaacttcactaaaggaggac 71 Query: 190 tgatacaactcaaccatggagggcctcaaccacttcagtacgtcgtcaatgcagcattcc 249 | |||||||||||||||||| ||||||| ||||||||||| | ||||| ||||| |||| Sbjct: 72 taatacaactcaaccatggaaggcctcagccacttcagtatgctgtcaacgcagctttcc 131 Query: 250 ttgcctctctgtatgctgattatctggacactgcagatacaccagggtggtattgtggac 309 |||| ||||| || || ||||| || ||||||| || || |||||||| || |||| Sbjct: 132 ttgcttctctatacagcgactatcttgaagctgcagacacgcctgggtggtactgcggac 191 Query: 310 ctaatttctataccacagatgtcctccgcaagtttgcaaagtcacagcttgattacattc 369 |||| ||||| |||||||| ||||||||||||||||| | ||||||||| || ||||| | Sbjct: 192 ctaacttctacaccacagaagtcctccgcaagtttgccaggtcacagctcgactacatcc 251 Query: 370 taggcaagaacccacaaaagatgagctacgtcgtgggttttggaaagaagtaccccaagc 429 | |||||||||||| |||||||||||||| |||||||| ||||| |||||||| |||| Sbjct: 252 ttggcaagaacccattgaagatgagctacgttgtgggtttcggaaacaagtacccgaagc 311 Query: 430 gtgttcatcacagaggggcatcaatccctcataacggtgtcaaatatggatgcaaaggag 489 | |||||||||||| || || || ||||| ||||| ||||| ||||| |||||||||| Sbjct: 312 gccctcatcacagaggcgcgtcgatacctcacaacggcgtcaagtatgggtgcaaaggag 371 Query: 490 gttttaaatggagagagtctaagaaagcaaaccctaatatcctcgtcggagcaatggttg 549 ||| || ||||| || | ||||| ||||||||||| ||||| |||||||||||||| | Sbjct: 372 gttacaagtggagggacacaaagaaggcaaaccctaacatccttgtcggagcaatggtgg 431 Query: 550 ctgggcctgacaagcatgatggcttcaaagatatccgcacaaattacaattacac 604 |||| || |||| || ||||||| ||||||| ||||||| || ||||| ||||| Sbjct: 432 ctggccccgacaggcgcgatggctacaaagatgtccgcacgaactacaactacac 486
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 270 bits (136), Expect = 5e-69 Identities = 211/236 (89%) Strand = Plus / Minus Query: 369 ctaggcaagaacccacaaaagatgagctacgtcgtgggttttggaaagaagtaccccaag 428 ||||| |||||||||| |||||||||||||| |||||||||||||| |||||||||||| Sbjct: 29890112 ctaggtaagaacccactgaagatgagctacgttgtgggttttggaaacaagtaccccaag 29890053 Query: 429 cgtgttcatcacagaggggcatcaatccctcataacggtgtcaaatatggatgcaaagga 488 || | |||||||||||| ||||||||||||||||| |||||||||||||||||||||||| Sbjct: 29890052 cgcgctcatcacagaggtgcatcaatccctcataatggtgtcaaatatggatgcaaagga 29889993 Query: 489 ggttttaaatggagagagtctaagaaagcaaaccctaatatcctcgtcggagcaatggtt 548 || ||||||||||| ||| ||||||| |||| ||||||||||| | |||||| ||||| Sbjct: 29889992 ggctttaaatggagggagactaagaagccaaatcctaatatccttattggagcactggtt 29889933 Query: 549 gctgggcctgacaagcatgatggcttcaaagatatccgcacaaattacaattacac 604 ||||| ||||| | ||||||||||||||||||| |||| ||||| ||||||||||| Sbjct: 29889932 gctggccctgataggcatgatggcttcaaagatgtccgtacaaactacaattacac 29889877 Score = 157 bits (79), Expect = 5e-35 Identities = 151/175 (86%) Strand = Plus / Minus Query: 182 aggaggactgatacaactcaaccatggagggcctcaaccacttcagtacgtcgtcaatgc 241 ||||||| ||||||| |||||||| ||| ||||||| ||||||||||| || |||||||| Sbjct: 29890389 aggaggaatgatacagctcaaccacggaaggcctcagccacttcagtatgttgtcaatgc 29890330 Query: 242 agcattccttgcctctctgtatgctgattatctggacactgcagatacaccagggtggta 301 || |||||||||||||| || ||||| ||||| ||||||||||||| |||||||| Sbjct: 29890329 ggctttccttgcctctctatacagcgattacctggatgctgcagatacacctgggtggta 29890270 Query: 302 ttgtggacctaatttctataccacagatgtcctccgcaagtttgcaaagtcacag 356 ||||||||||| |||||| || ||||| ||||||||||| ||||||| ||||||| Sbjct: 29890269 ttgtggacctactttctacactacagaagtcctccgcaaatttgcaaggtcacag 29890215 Score = 113 bits (57), Expect = 7e-22 Identities = 120/141 (85%) Strand = Plus / Minus Query: 44 tcaggttcttctcagcaggttgcggctcttcctaagcccagggtatccttatgaagaaat 103 |||||||||||| |||||||||||||| |||||||| || || |||||||| |||||||| Sbjct: 29890604 tcaggttcttctgagcaggttgcggcttttcctaagtcctggatatccttacgaagaaat 29890545 Query: 104 attaaggacattccacaaccaaactgacaatgtcatgtgctcatatttaccagtattcaa 163 | | || ||||| ||||||||||| |||||||| |||||||| ||| | || | | ||| Sbjct: 29890544 actgagaacatttcacaaccaaacagacaatgttatgtgctcgtatctgccgatgtacaa 29890485 Query: 164 ttcattcaacttcactaaagg 184 |||||||||||| || ||||| Sbjct: 29890484 ttcattcaactttaccaaagg 29890464 Score = 63.9 bits (32), Expect = 6e-07 Identities = 68/80 (85%) Strand = Plus / Minus Query: 480 tgcaaaggaggttttaaatggagagagtctaagaaagcaaaccctaatatcctcgtcgga 539 ||||||||||||| || |||||||| | |||||| |||||||||| ||| |||||||| Sbjct: 12077729 tgcaaaggaggttggaagtggagagaaaccaagaaaccaaaccctaacatcatcgtcgga 12077670 Query: 540 gcaatggttgctgggcctga 559 || ||||| ||||| ||||| Sbjct: 12077669 gcgatggtagctggccctga 12077650 Score = 50.1 bits (25), Expect = 0.009 Identities = 79/97 (81%) Strand = Plus / Minus Query: 211 ggcctcaaccacttcagtacgtcgtcaatgcagcattccttgcctctctgtatgctgatt 270 |||| ||||| |||||||| || || || || ||||||||||| ||| |||| | ||| | Sbjct: 12078081 ggccacaacctcttcagtatgtggtgaacgctgcattccttgcttctttgtacggtgact 12078022 Query: 271 atctggacactgcagatacaccagggtggtattgtgg 307 |||| || |||||||||| || || ||||||||||| Sbjct: 12078021 atcttgaggctgcagatacccctggctggtattgtgg 12077985 Score = 46.1 bits (23), Expect = 0.13 Identities = 68/83 (81%) Strand = Plus / Minus Query: 45 caggttcttctcagcaggttgcggctcttcctaagcccagggtatccttatgaagaaata 104 ||||||||| | ||| |||| |||||||| |||| || || ||||| |||||||| || Sbjct: 12078674 caggttcttttgagccggttaaggctcttcttaagtcctggttatccatatgaagagatc 12078615 Query: 105 ttaaggacattccacaaccaaac 127 | |||||||||||||| ||||| Sbjct: 12078614 ctcaggacattccacaatcaaac 12078592 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Minus Query: 25 atgacaagcttccaggatctcaggtt 50 ||||||||||||||||| |||||||| Sbjct: 29890863 atgacaagcttccaggagctcaggtt 29890838
>gb|AY387483.1| Oryza sativa (japonica cultivar-group) BAC OSJNBa0084L17, complete sequence Length = 159661 Score = 270 bits (136), Expect = 5e-69 Identities = 211/236 (89%) Strand = Plus / Plus Query: 369 ctaggcaagaacccacaaaagatgagctacgtcgtgggttttggaaagaagtaccccaag 428 ||||| |||||||||| |||||||||||||| |||||||||||||| |||||||||||| Sbjct: 120494 ctaggtaagaacccactgaagatgagctacgttgtgggttttggaaacaagtaccccaag 120553 Query: 429 cgtgttcatcacagaggggcatcaatccctcataacggtgtcaaatatggatgcaaagga 488 || | |||||||||||| ||||||||||||||||| |||||||||||||||||||||||| Sbjct: 120554 cgcgctcatcacagaggtgcatcaatccctcataatggtgtcaaatatggatgcaaagga 120613 Query: 489 ggttttaaatggagagagtctaagaaagcaaaccctaatatcctcgtcggagcaatggtt 548 || ||||||||||| ||| ||||||| |||| ||||||||||| | |||||| ||||| Sbjct: 120614 ggctttaaatggagggagactaagaagccaaatcctaatatccttattggagcactggtt 120673 Query: 549 gctgggcctgacaagcatgatggcttcaaagatatccgcacaaattacaattacac 604 ||||| ||||| | ||||||||||||||||||| |||| ||||| ||||||||||| Sbjct: 120674 gctggccctgataggcatgatggcttcaaagatgtccgtacaaactacaattacac 120729 Score = 157 bits (79), Expect = 5e-35 Identities = 151/175 (86%) Strand = Plus / Plus Query: 182 aggaggactgatacaactcaaccatggagggcctcaaccacttcagtacgtcgtcaatgc 241 ||||||| ||||||| |||||||| ||| ||||||| ||||||||||| || |||||||| Sbjct: 120217 aggaggaatgatacagctcaaccacggaaggcctcagccacttcagtatgttgtcaatgc 120276 Query: 242 agcattccttgcctctctgtatgctgattatctggacactgcagatacaccagggtggta 301 || |||||||||||||| || ||||| ||||| ||||||||||||| |||||||| Sbjct: 120277 ggctttccttgcctctctatacagcgattacctggatgctgcagatacacctgggtggta 120336 Query: 302 ttgtggacctaatttctataccacagatgtcctccgcaagtttgcaaagtcacag 356 ||||||||||| |||||| || ||||| ||||||||||| ||||||| ||||||| Sbjct: 120337 ttgtggacctactttctacactacagaagtcctccgcaaatttgcaaggtcacag 120391 Score = 113 bits (57), Expect = 7e-22 Identities = 120/141 (85%) Strand = Plus / Plus Query: 44 tcaggttcttctcagcaggttgcggctcttcctaagcccagggtatccttatgaagaaat 103 |||||||||||| |||||||||||||| |||||||| || || |||||||| |||||||| Sbjct: 120002 tcaggttcttctgagcaggttgcggcttttcctaagtcctggatatccttacgaagaaat 120061 Query: 104 attaaggacattccacaaccaaactgacaatgtcatgtgctcatatttaccagtattcaa 163 | | || ||||| ||||||||||| |||||||| |||||||| ||| | || | | ||| Sbjct: 120062 actgagaacatttcacaaccaaacagacaatgttatgtgctcgtatctgccgatgtacaa 120121 Query: 164 ttcattcaacttcactaaagg 184 |||||||||||| || ||||| Sbjct: 120122 ttcattcaactttaccaaagg 120142 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Plus Query: 25 atgacaagcttccaggatctcaggtt 50 ||||||||||||||||| |||||||| Sbjct: 119743 atgacaagcttccaggagctcaggtt 119768
>gb|AC118133.4| Oryza sativa chromosome 3 BAC OSJNBb0016H12 genomic sequence, complete sequence Length = 139946 Score = 270 bits (136), Expect = 5e-69 Identities = 211/236 (89%) Strand = Plus / Minus Query: 369 ctaggcaagaacccacaaaagatgagctacgtcgtgggttttggaaagaagtaccccaag 428 ||||| |||||||||| |||||||||||||| |||||||||||||| |||||||||||| Sbjct: 56053 ctaggtaagaacccactgaagatgagctacgttgtgggttttggaaacaagtaccccaag 55994 Query: 429 cgtgttcatcacagaggggcatcaatccctcataacggtgtcaaatatggatgcaaagga 488 || | |||||||||||| ||||||||||||||||| |||||||||||||||||||||||| Sbjct: 55993 cgcgctcatcacagaggtgcatcaatccctcataatggtgtcaaatatggatgcaaagga 55934 Query: 489 ggttttaaatggagagagtctaagaaagcaaaccctaatatcctcgtcggagcaatggtt 548 || ||||||||||| ||| ||||||| |||| ||||||||||| | |||||| ||||| Sbjct: 55933 ggctttaaatggagggagactaagaagccaaatcctaatatccttattggagcactggtt 55874 Query: 549 gctgggcctgacaagcatgatggcttcaaagatatccgcacaaattacaattacac 604 ||||| ||||| | ||||||||||||||||||| |||| ||||| ||||||||||| Sbjct: 55873 gctggccctgataggcatgatggcttcaaagatgtccgtacaaactacaattacac 55818 Score = 157 bits (79), Expect = 5e-35 Identities = 151/175 (86%) Strand = Plus / Minus Query: 182 aggaggactgatacaactcaaccatggagggcctcaaccacttcagtacgtcgtcaatgc 241 ||||||| ||||||| |||||||| ||| ||||||| ||||||||||| || |||||||| Sbjct: 56330 aggaggaatgatacagctcaaccacggaaggcctcagccacttcagtatgttgtcaatgc 56271 Query: 242 agcattccttgcctctctgtatgctgattatctggacactgcagatacaccagggtggta 301 || |||||||||||||| || ||||| ||||| ||||||||||||| |||||||| Sbjct: 56270 ggctttccttgcctctctatacagcgattacctggatgctgcagatacacctgggtggta 56211 Query: 302 ttgtggacctaatttctataccacagatgtcctccgcaagtttgcaaagtcacag 356 ||||||||||| |||||| || ||||| ||||||||||| ||||||| ||||||| Sbjct: 56210 ttgtggacctactttctacactacagaagtcctccgcaaatttgcaaggtcacag 56156 Score = 113 bits (57), Expect = 7e-22 Identities = 120/141 (85%) Strand = Plus / Minus Query: 44 tcaggttcttctcagcaggttgcggctcttcctaagcccagggtatccttatgaagaaat 103 |||||||||||| |||||||||||||| |||||||| || || |||||||| |||||||| Sbjct: 56545 tcaggttcttctgagcaggttgcggcttttcctaagtcctggatatccttacgaagaaat 56486 Query: 104 attaaggacattccacaaccaaactgacaatgtcatgtgctcatatttaccagtattcaa 163 | | || ||||| ||||||||||| |||||||| |||||||| ||| | || | | ||| Sbjct: 56485 actgagaacatttcacaaccaaacagacaatgttatgtgctcgtatctgccgatgtacaa 56426 Query: 164 ttcattcaacttcactaaagg 184 |||||||||||| || ||||| Sbjct: 56425 ttcattcaactttaccaaagg 56405 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Minus Query: 25 atgacaagcttccaggatctcaggtt 50 ||||||||||||||||| |||||||| Sbjct: 56804 atgacaagcttccaggagctcaggtt 56779
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 270 bits (136), Expect = 5e-69 Identities = 211/236 (89%) Strand = Plus / Minus Query: 369 ctaggcaagaacccacaaaagatgagctacgtcgtgggttttggaaagaagtaccccaag 428 ||||| |||||||||| |||||||||||||| |||||||||||||| |||||||||||| Sbjct: 29981534 ctaggtaagaacccactgaagatgagctacgttgtgggttttggaaacaagtaccccaag 29981475 Query: 429 cgtgttcatcacagaggggcatcaatccctcataacggtgtcaaatatggatgcaaagga 488 || | |||||||||||| ||||||||||||||||| |||||||||||||||||||||||| Sbjct: 29981474 cgcgctcatcacagaggtgcatcaatccctcataatggtgtcaaatatggatgcaaagga 29981415 Query: 489 ggttttaaatggagagagtctaagaaagcaaaccctaatatcctcgtcggagcaatggtt 548 || ||||||||||| ||| ||||||| |||| ||||||||||| | |||||| ||||| Sbjct: 29981414 ggctttaaatggagggagactaagaagccaaatcctaatatccttattggagcactggtt 29981355 Query: 549 gctgggcctgacaagcatgatggcttcaaagatatccgcacaaattacaattacac 604 ||||| ||||| | ||||||||||||||||||| |||| ||||| ||||||||||| Sbjct: 29981354 gctggccctgataggcatgatggcttcaaagatgtccgtacaaactacaattacac 29981299 Score = 157 bits (79), Expect = 5e-35 Identities = 151/175 (86%) Strand = Plus / Minus Query: 182 aggaggactgatacaactcaaccatggagggcctcaaccacttcagtacgtcgtcaatgc 241 ||||||| ||||||| |||||||| ||| ||||||| ||||||||||| || |||||||| Sbjct: 29981811 aggaggaatgatacagctcaaccacggaaggcctcagccacttcagtatgttgtcaatgc 29981752 Query: 242 agcattccttgcctctctgtatgctgattatctggacactgcagatacaccagggtggta 301 || |||||||||||||| || ||||| ||||| ||||||||||||| |||||||| Sbjct: 29981751 ggctttccttgcctctctatacagcgattacctggatgctgcagatacacctgggtggta 29981692 Query: 302 ttgtggacctaatttctataccacagatgtcctccgcaagtttgcaaagtcacag 356 ||||||||||| |||||| || ||||| ||||||||||| ||||||| ||||||| Sbjct: 29981691 ttgtggacctactttctacactacagaagtcctccgcaaatttgcaaggtcacag 29981637 Score = 113 bits (57), Expect = 7e-22 Identities = 120/141 (85%) Strand = Plus / Minus Query: 44 tcaggttcttctcagcaggttgcggctcttcctaagcccagggtatccttatgaagaaat 103 |||||||||||| |||||||||||||| |||||||| || || |||||||| |||||||| Sbjct: 29982026 tcaggttcttctgagcaggttgcggcttttcctaagtcctggatatccttacgaagaaat 29981967 Query: 104 attaaggacattccacaaccaaactgacaatgtcatgtgctcatatttaccagtattcaa 163 | | || ||||| ||||||||||| |||||||| |||||||| ||| | || | | ||| Sbjct: 29981966 actgagaacatttcacaaccaaacagacaatgttatgtgctcgtatctgccgatgtacaa 29981907 Query: 164 ttcattcaacttcactaaagg 184 |||||||||||| || ||||| Sbjct: 29981906 ttcattcaactttaccaaagg 29981886 Score = 63.9 bits (32), Expect = 6e-07 Identities = 68/80 (85%) Strand = Plus / Minus Query: 480 tgcaaaggaggttttaaatggagagagtctaagaaagcaaaccctaatatcctcgtcgga 539 ||||||||||||| || |||||||| | |||||| |||||||||| ||| |||||||| Sbjct: 12074492 tgcaaaggaggttggaagtggagagaaaccaagaaaccaaaccctaacatcatcgtcgga 12074433 Query: 540 gcaatggttgctgggcctga 559 || ||||| ||||| ||||| Sbjct: 12074432 gcgatggtagctggccctga 12074413 Score = 50.1 bits (25), Expect = 0.009 Identities = 79/97 (81%) Strand = Plus / Minus Query: 211 ggcctcaaccacttcagtacgtcgtcaatgcagcattccttgcctctctgtatgctgatt 270 |||| ||||| |||||||| || || || || ||||||||||| ||| |||| | ||| | Sbjct: 12074844 ggccacaacctcttcagtatgtggtgaacgctgcattccttgcttctttgtacggtgact 12074785 Query: 271 atctggacactgcagatacaccagggtggtattgtgg 307 |||| || |||||||||| || || ||||||||||| Sbjct: 12074784 atcttgaggctgcagatacccctggctggtattgtgg 12074748 Score = 46.1 bits (23), Expect = 0.13 Identities = 68/83 (81%) Strand = Plus / Minus Query: 45 caggttcttctcagcaggttgcggctcttcctaagcccagggtatccttatgaagaaata 104 ||||||||| | ||| |||| |||||||| |||| || || ||||| |||||||| || Sbjct: 12075437 caggttcttttgagccggttaaggctcttcttaagtcctggttatccatatgaagagatc 12075378 Query: 105 ttaaggacattccacaaccaaac 127 | |||||||||||||| ||||| Sbjct: 12075377 ctcaggacattccacaatcaaac 12075355 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Minus Query: 25 atgacaagcttccaggatctcaggtt 50 ||||||||||||||||| |||||||| Sbjct: 29982285 atgacaagcttccaggagctcaggtt 29982260
>gb|AY253447.1| Gossypium hirsutum endo-1,4-beta-glucanase mRNA, complete cds Length = 2031 Score = 91.7 bits (46), Expect = 3e-15 Identities = 205/258 (79%) Strand = Plus / Plus Query: 201 aaccatggagggcctcaaccacttcagtacgtcgtcaatgcagcattccttgcctctctg 260 ||||||||| ||||||| ||||| || ||||| ||||||||||| ||| | ||| | || Sbjct: 1349 aaccatggaaggcctcagccactgcaatacgtagtcaatgcagccttcttagccgcccta 1408 Query: 261 tatgctgattatctggacactgcagatacaccagggtggtattgtggacctaatttctat 320 ||| ||||||||| || ||||| |||||||| || ||||||||||| || ||||||||| Sbjct: 1409 tatagtgattatcttgatactgctgatacacctggatggtattgtggtcccaatttctat 1468 Query: 321 accacagatgtcctccgcaagtttgcaaagtcacagcttgattacattctaggcaagaac 380 | || |||||||| || | ||||| || | ||| ||||||| || || ||||| || Sbjct: 1469 tcaactgatgtcctgcgtgaatttgccaaaacccagattgattatatccttggcaaaaat 1528 Query: 381 ccacaaaagatgagctacgtcgtgggttttggaaagaagtaccccaagcgtgttcatcac 440 || | ||| |||||||| || ||||| ||||| || | || || |||| |||||| || Sbjct: 1529 cctcgaaaaatgagctatgttgtgggctttggtaaccattatccaaagcatgttcaccat 1588 Query: 441 agaggggcatcaatccct 458 ||||||||||| |||||| Sbjct: 1589 agaggggcatctatccct 1606 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Plus Query: 537 ggagcaatggttgctgggcctgacaagcatgatgg 571 ||||| ||||| ||||| ||||||||||||||||| Sbjct: 1685 ggagccatggtagctggacctgacaagcatgatgg 1719
>gb|AY574906.1| Gossypium hirsutum membrane-anchored endo-1,4-beta-glucanase (CEL) mRNA, complete cds Length = 2293 Score = 83.8 bits (42), Expect = 6e-13 Identities = 204/258 (79%) Strand = Plus / Plus Query: 201 aaccatggagggcctcaaccacttcagtacgtcgtcaatgcagcattccttgcctctctg 260 ||||||||| ||||||| ||||| || ||||| ||||||||||| ||| | ||| | || Sbjct: 1363 aaccatggaaggcctcagccactgcaatacgtagtcaatgcagccttcttagccgcccta 1422 Query: 261 tatgctgattatctggacactgcagatacaccagggtggtattgtggacctaatttctat 320 ||| ||||||||| || |||| |||||||| || ||||||||||| || ||||||||| Sbjct: 1423 tatagtgattatcttgatgctgctgatacacctggatggtattgtggtcccaatttctat 1482 Query: 321 accacagatgtcctccgcaagtttgcaaagtcacagcttgattacattctaggcaagaac 380 | || |||||||| || | ||||| || | ||| ||||||| || || ||||| || Sbjct: 1483 tcaactgatgtcctgcgtgaatttgccaaaacccagattgattatatccttggcaaaaat 1542 Query: 381 ccacaaaagatgagctacgtcgtgggttttggaaagaagtaccccaagcgtgttcatcac 440 || | ||| |||||||| || ||||| ||||| || | || || |||| |||||| || Sbjct: 1543 cctcgaaaaatgagctatgttgtgggctttggtaaccattatccaaagcatgttcaccat 1602 Query: 441 agaggggcatcaatccct 458 ||||||||||| |||||| Sbjct: 1603 agaggggcatctatccct 1620
>gb|AF511408.1| Gossypium hirsutum endo-1,4-beta-glucanase mRNA, complete cds Length = 2282 Score = 75.8 bits (38), Expect = 1e-10 Identities = 110/134 (82%) Strand = Plus / Plus Query: 201 aaccatggagggcctcaaccacttcagtacgtcgtcaatgcagcattccttgcctctctg 260 ||||||||| ||||||| ||||| || ||||| ||||||||||| ||| | ||| | || Sbjct: 1382 aaccatggaaggcctcagccactgcaatacgtagtcaatgcagccttcttagccgcccta 1441 Query: 261 tatgctgattatctggacactgcagatacaccagggtggtattgtggacctaatttctat 320 ||| ||||||||| || |||| |||||||| || ||||||||||| || ||||||||| Sbjct: 1442 tatagtgattatcttgatgctgctgatacacctggatggtattgtggtcccaatttctat 1501 Query: 321 accacagatgtcct 334 | || |||||||| Sbjct: 1502 tcaactgatgtcct 1515 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Plus Query: 537 ggagcaatggttgctgggcctgacaagcatgatgg 571 ||||| ||||| ||||| ||||||||||||||||| Sbjct: 1718 ggagccatggtagctggacctgacaagcatgatgg 1752
>emb|AJ621355.1| Pisum sativum partial mRNA for endo-1,4-beta-D-glucanase KORRIGAN (kor-1 gene) Length = 688 Score = 67.9 bits (34), Expect = 4e-08 Identities = 100/122 (81%) Strand = Plus / Plus Query: 294 gggtggtattgtggacctaatttctataccacagatgtcctccgcaagtttgcaaagtca 353 ||||||||||||||||||||||||||| | || ||| |||||| ||||||| | | || Sbjct: 248 gggtggtattgtggacctaatttctattcaaccgataaactccgcgagtttgccaggaca 307 Query: 354 cagcttgattacattctaggcaagaacccacaaaagatgagctacgtcgtgggttttgga 413 ||| |||||||||| || || ||||| |||| || |||||||| | || ||||||||| Sbjct: 308 cagattgattacatccttgggaagaatccacggaaaatgagctatattgtaggttttgga 367 Query: 414 aa 415 || Sbjct: 368 aa 369 Score = 44.1 bits (22), Expect = 0.53 Identities = 34/38 (89%) Strand = Plus / Plus Query: 84 gggtatccttatgaagaaatattaaggacattccacaa 121 |||||||| ||||||||||| ||||||| |||||||| Sbjct: 38 gggtatccatatgaagaaattctaaggaccttccacaa 75
>gb|DQ382354.1| Glycine max clone pSC12a endo-1,4-beta-glucancase precursor (Cel12) mRNA, partial cds Length = 1841 Score = 65.9 bits (33), Expect = 1e-07 Identities = 57/65 (87%) Strand = Plus / Plus Query: 543 atggttgctgggcctgacaagcatgatggcttcaaagatatccgcacaaattacaattac 602 |||||||| || ||||||||||||||||||||| | ||| | || ||||| ||||||||| Sbjct: 1672 atggttgccggtcctgacaagcatgatggcttccatgatgttcgtacaaactacaattac 1731 Query: 603 acaga 607 ||||| Sbjct: 1732 acaga 1736 Score = 61.9 bits (31), Expect = 2e-06 Identities = 118/147 (80%) Strand = Plus / Plus Query: 266 tgattatctggacactgcagatacaccagggtggtattgtggacctaatttctataccac 325 ||||||||| || |||| |||||||| || |||||||||||||||||||||| | | || Sbjct: 1395 tgattatcttgatgctgctgatacacctggatggtattgtggacctaatttcttttcaac 1454 Query: 326 agatgtcctccgcaagtttgcaaagtcacagcttgattacattctaggcaagaacccaca 385 || || ||||| | ||||| ||||| ||| |||||||||| || || || |||||| Sbjct: 1455 cgacgtgctccgtagctttgccaagtcccagattgattacatccttggaaataacccaag 1514 Query: 386 aaagatgagctacgtcgtgggttttgg 412 || ||||| || ||||| |||||||| Sbjct: 1515 gaaaatgagttatgtcgtaggttttgg 1541
>gb|AC137547.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0052J20, complete sequence Length = 144969 Score = 63.9 bits (32), Expect = 6e-07 Identities = 68/80 (85%) Strand = Plus / Minus Query: 480 tgcaaaggaggttttaaatggagagagtctaagaaagcaaaccctaatatcctcgtcgga 539 ||||||||||||| || |||||||| | |||||| |||||||||| ||| |||||||| Sbjct: 98309 tgcaaaggaggttggaagtggagagaaaccaagaaaccaaaccctaacatcatcgtcgga 98250 Query: 540 gcaatggttgctgggcctga 559 || ||||| ||||| ||||| Sbjct: 98249 gcgatggtagctggccctga 98230 Score = 50.1 bits (25), Expect = 0.009 Identities = 79/97 (81%) Strand = Plus / Minus Query: 211 ggcctcaaccacttcagtacgtcgtcaatgcagcattccttgcctctctgtatgctgatt 270 |||| ||||| |||||||| || || || || ||||||||||| ||| |||| | ||| | Sbjct: 98661 ggccacaacctcttcagtatgtggtgaacgctgcattccttgcttctttgtacggtgact 98602 Query: 271 atctggacactgcagatacaccagggtggtattgtgg 307 |||| || |||||||||| || || ||||||||||| Sbjct: 98601 atcttgaggctgcagatacccctggctggtattgtgg 98565 Score = 46.1 bits (23), Expect = 0.13 Identities = 68/83 (81%) Strand = Plus / Minus Query: 45 caggttcttctcagcaggttgcggctcttcctaagcccagggtatccttatgaagaaata 104 ||||||||| | ||| |||| |||||||| |||| || || ||||| |||||||| || Sbjct: 99254 caggttcttttgagccggttaaggctcttcttaagtcctggttatccatatgaagagatc 99195 Query: 105 ttaaggacattccacaaccaaac 127 | |||||||||||||| ||||| Sbjct: 99194 ctcaggacattccacaatcaaac 99172
>dbj|AK102748.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033106K04, full insert sequence Length = 2189 Score = 63.9 bits (32), Expect = 6e-07 Identities = 68/80 (85%) Strand = Plus / Plus Query: 480 tgcaaaggaggttttaaatggagagagtctaagaaagcaaaccctaatatcctcgtcgga 539 ||||||||||||| || |||||||| | |||||| |||||||||| ||| |||||||| Sbjct: 1693 tgcaaaggaggttggaagtggagagaaaccaagaaaccaaaccctaacatcatcgtcgga 1752 Query: 540 gcaatggttgctgggcctga 559 || ||||| ||||| ||||| Sbjct: 1753 gcgatggtagctggccctga 1772 Score = 50.1 bits (25), Expect = 0.009 Identities = 79/97 (81%) Strand = Plus / Plus Query: 211 ggcctcaaccacttcagtacgtcgtcaatgcagcattccttgcctctctgtatgctgatt 270 |||| ||||| |||||||| || || || || ||||||||||| ||| |||| | ||| | Sbjct: 1424 ggccacaacctcttcagtatgtggtgaacgctgcattccttgcttctttgtacggtgact 1483 Query: 271 atctggacactgcagatacaccagggtggtattgtgg 307 |||| || |||||||||| || || ||||||||||| Sbjct: 1484 atcttgaggctgcagatacccctggctggtattgtgg 1520 Score = 46.1 bits (23), Expect = 0.13 Identities = 68/83 (81%) Strand = Plus / Plus Query: 45 caggttcttctcagcaggttgcggctcttcctaagcccagggtatccttatgaagaaata 104 ||||||||| | ||| |||| |||||||| |||| || || ||||| |||||||| || Sbjct: 1258 caggttcttttgagccggttaaggctcttcttaagtcctggttatccatatgaagagatc 1317 Query: 105 ttaaggacattccacaaccaaac 127 | |||||||||||||| ||||| Sbjct: 1318 ctcaggacattccacaatcaaac 1340
>gb|AY660967.1| Populus tremula x Populus tremuloides Cel9A mRNA, complete cds Length = 1860 Score = 61.9 bits (31), Expect = 2e-06 Identities = 97/119 (81%) Strand = Plus / Plus Query: 201 aaccatggagggcctcaaccacttcagtacgtcgtcaatgcagcattccttgcctctctg 260 ||||||||| ||||||| || |||||||| ||||||||||| || ||||| || | || Sbjct: 1303 aaccatggaaggcctcagccccttcagtatgtcgtcaatgctgccttcctagcaacccta 1362 Query: 261 tatgctgattatctggacactgcagatacaccagggtggtattgtggacctaatttcta 319 | | ||||||||| || |||| |||||||| || ||||| |||||||| |||||||| Sbjct: 1363 tttagtgattatcttgaagctgctgatacacctggatggtactgtggaccaaatttcta 1421 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Plus Query: 537 ggagcaatggttgctgggcctgacaagcatgatgg 571 ||||| ||||||||||| ||||||| ||||||||| Sbjct: 1639 ggagccatggttgctggccctgacaggcatgatgg 1673
>gb|AY535003.1| Populus tremuloides endo-1,4-beta-glucanase (Kor1) mRNA, complete cds Length = 2562 Score = 61.9 bits (31), Expect = 2e-06 Identities = 97/119 (81%) Strand = Plus / Plus Query: 201 aaccatggagggcctcaaccacttcagtacgtcgtcaatgcagcattccttgcctctctg 260 ||||||||| ||||||| || |||||||| ||||||||||| || ||||| || | || Sbjct: 1565 aaccatggaaggcctcagccccttcagtatgtcgtcaatgctgccttcctagcaacccta 1624 Query: 261 tatgctgattatctggacactgcagatacaccagggtggtattgtggacctaatttcta 319 | | ||||||||| || |||| |||||||| || ||||| |||||||| |||||||| Sbjct: 1625 tttagtgattatcttgaagctgctgatacacctggatggtactgtggaccaaatttcta 1683 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Plus Query: 537 ggagcaatggttgctgggcctgacaagcatgatgg 571 ||||| ||||||||||| ||||||| ||||||||| Sbjct: 1901 ggagccatggttgctggccctgacaggcatgatgg 1935
>dbj|AB084463.1| Pyrus communis PC-EG1 mRNA for endo-1,4-beta-D-glucanase, encodes membrane-spanning domain, complete cds Length = 2242 Score = 60.0 bits (30), Expect = 9e-06 Identities = 189/242 (78%) Strand = Plus / Plus Query: 78 agcccagggtatccttatgaagaaatattaaggacattccacaaccaaactgacaatgtc 137 ||||| |||||||| ||||||||||| || |||||||| |||||||| ||| || || Sbjct: 1260 agccctgggtatccgtatgaagaaattttgaggacatttcacaaccagactagcataatc 1319 Query: 138 atgtgctcatatttaccagtattcaattcattcaacttcactaaaggaggactgatacaa 197 ||||||||||| | ||||| || | | |||||| || |||||||| |||| || Sbjct: 1320 atgtgctcatacctgccagtttttacaaccttcaacagaaccaaaggaggcttgatccag 1379 Query: 198 ctcaaccatggagggcctcaaccacttcagtacgtcgtcaatgcagcattccttgcctct 257 | || |||||| |||| ||||| |||||||| || ||||||||||| ||| | || | Sbjct: 1380 ttgaatcatggaaggccacaacctcttcagtatgtagtcaatgcagccttcttagctaca 1439 Query: 258 ctgtatgctgattatctggacactgcagatacaccagggtggtattgtggacctaatttc 317 ||||| ||| ||||| || |||| |||||||| ||||||||||||||||| || ||| Sbjct: 1440 ttgtatagtgagtatcttgatgctgctgatacacctgggtggtattgtggacccaacttc 1499 Query: 318 ta 319 || Sbjct: 1500 ta 1501 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 543 atggttgctgggcctgacaagcatgatgg 571 ||||||||||| |||||||| |||||||| Sbjct: 1725 atggttgctggtcctgacaaacatgatgg 1753
>gb|BT013492.1| Lycopersicon esculentum clone 132176F, mRNA sequence Length = 2314 Score = 58.0 bits (29), Expect = 4e-05 Identities = 137/173 (79%) Strand = Plus / Plus Query: 78 agcccagggtatccttatgaagaaatattaaggacattccacaaccaaactgacaatgtc 137 ||||| || ||||||||||||||||| ||||||||||| || ||||| ||| || || Sbjct: 1332 agccctggatatccttatgaagaaattttaaggacatttcataaccagactagcataatc 1391 Query: 138 atgtgctcatatttaccagtattcaattcattcaacttcactaaaggaggactgatacaa 197 |||||||| || | ||| | |||| ||| || || ||| |||||||| || || ||| Sbjct: 1392 atgtgctcctacctgccaatcttcacttcttttaatcgcacaaaaggagggctaatccaa 1451 Query: 198 ctcaaccatggagggcctcaaccacttcagtacgtcgtcaatgcagcattcct 250 | ||||||||| ||||||| || || ||||| || ||||||||||| ||||| Sbjct: 1452 ttaaaccatggaaggcctcagcctctccagtatgtagtcaatgcagccttcct 1504 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Plus Query: 537 ggagcaatggttgctgggcctgacaagcatgatgg 571 ||||| ||||||||||| || |||||||||||||| Sbjct: 1791 ggagccatggttgctggaccagacaagcatgatgg 1825
>gb|U78526.1|LEU78526 Lycopersicon esculentum endo-1,4-beta-glucanase (Cel3) mRNA, complete cds Length = 2286 Score = 58.0 bits (29), Expect = 4e-05 Identities = 137/173 (79%) Strand = Plus / Plus Query: 78 agcccagggtatccttatgaagaaatattaaggacattccacaaccaaactgacaatgtc 137 ||||| || ||||||||||||||||| ||||||||||| || ||||| ||| || || Sbjct: 1322 agccctggatatccttatgaagaaattttaaggacatttcataaccagactagcataatc 1381 Query: 138 atgtgctcatatttaccagtattcaattcattcaacttcactaaaggaggactgatacaa 197 |||||||| || | ||| | |||| ||| || || ||| |||||||| || || ||| Sbjct: 1382 atgtgctcctacctgccaatcttcacttcttttaatcgcacaaaaggagggctaatccaa 1441 Query: 198 ctcaaccatggagggcctcaaccacttcagtacgtcgtcaatgcagcattcct 250 | ||||||||| ||||||| || || ||||| || ||||||||||| ||||| Sbjct: 1442 ttaaaccatggaaggcctcagcctctccagtatgtagtcaatgcagccttcct 1494 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Plus Query: 537 ggagcaatggttgctgggcctgacaagcatgatgg 571 ||||| ||||||||||| || |||||||||||||| Sbjct: 1781 ggagccatggttgctggaccagacaagcatgatgg 1815
>ref|NM_124350.2| Arabidopsis thaliana KOR1 (KORRIGAN); hydrolase, hydrolyzing O-glycosyl compounds AT5G49720 (KOR1) mRNA, complete cds Length = 2360 Score = 54.0 bits (27), Expect = 5e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 266 tgattatctggacactgcagatacaccagggtggtattgtggacctaatttctat 320 |||||||||||| |||| ||||| || || ||||| |||||||||||||||||| Sbjct: 1488 tgattatctggatgctgctgatactcctggatggtactgtggacctaatttctat 1542 Score = 40.1 bits (20), Expect = 8.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 537 ggagcaatggttgctgggcctgacaagc 564 ||||| ||||||||||| |||||||||| Sbjct: 1759 ggagccatggttgctggtcctgacaagc 1786
>ref|NM_118559.1| Arabidopsis thaliana hydrolase, hydrolyzing O-glycosyl compounds AT4G24260 mRNA, complete cds Length = 1863 Score = 54.0 bits (27), Expect = 5e-04 Identities = 60/71 (84%) Strand = Plus / Plus Query: 537 ggagcaatggttgctgggcctgacaagcatgatggcttcaaagatatccgcacaaattac 596 ||||||||||||||||| || ||||||||||| || ||| | || || || ||||||||| Sbjct: 1639 ggagcaatggttgctggaccagacaagcatgacggattccacgacatacgaacaaattac 1698 Query: 597 aattacacaga 607 || || ||||| Sbjct: 1699 aactatacaga 1709
>gb|BT013449.1| Lycopersicon esculentum clone 132105F, mRNA sequence Length = 2203 Score = 54.0 bits (27), Expect = 5e-04 Identities = 60/71 (84%) Strand = Plus / Plus Query: 180 aaaggaggactgatacaactcaaccatggagggcctcaaccacttcagtacgtcgtcaat 239 ||||| || |||||| || | ||||||||| ||||||| ||||||||||| || |||||| Sbjct: 1341 aaaggtgggctgatagaattaaaccatggaaggcctcagccacttcagtatgtagtcaat 1400 Query: 240 gcagcattcct 250 || || ||||| Sbjct: 1401 gctgccttcct 1411 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 297 tggtattgtggacctaatttctataccacagatgtcct 334 ||||||||||||||||||||||| |||| |||||||| Sbjct: 1458 tggtattgtggacctaatttctactccaccgatgtcct 1495
>emb|AL078637.1|ATT22A6 Arabidopsis thaliana DNA chromosome 4, BAC clone T22A6 (ESSA project) Length = 108459 Score = 54.0 bits (27), Expect = 5e-04 Identities = 60/71 (84%) Strand = Plus / Minus Query: 537 ggagcaatggttgctgggcctgacaagcatgatggcttcaaagatatccgcacaaattac 596 ||||||||||||||||| || ||||||||||| || ||| | || || || ||||||||| Sbjct: 29146 ggagcaatggttgctggaccagacaagcatgacggattccacgacatacgaacaaattac 29087 Query: 597 aattacacaga 607 || || ||||| Sbjct: 29086 aactatacaga 29076
>emb|AL161561.2|ATCHRIV61 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 61 Length = 198402 Score = 54.0 bits (27), Expect = 5e-04 Identities = 60/71 (84%) Strand = Plus / Minus Query: 537 ggagcaatggttgctgggcctgacaagcatgatggcttcaaagatatccgcacaaattac 596 ||||||||||||||||| || ||||||||||| || ||| | || || || ||||||||| Sbjct: 45803 ggagcaatggttgctggaccagacaagcatgacggattccacgacatacgaacaaattac 45744 Query: 597 aattacacaga 607 || || ||||| Sbjct: 45743 aactatacaga 45733
>dbj|AK222193.1| Arabidopsis thaliana mRNA for cellulase homolog OR16pep precursor, partial cds, clone: RAFL24-21-F09 Length = 1102 Score = 54.0 bits (27), Expect = 5e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 266 tgattatctggacactgcagatacaccagggtggtattgtggacctaatttctat 320 |||||||||||| |||| ||||| || || ||||| |||||||||||||||||| Sbjct: 274 tgattatctggatgctgctgatactcctggatggtactgtggacctaatttctat 328 Score = 40.1 bits (20), Expect = 8.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 537 ggagcaatggttgctgggcctgacaagc 564 ||||| ||||||||||| |||||||||| Sbjct: 545 ggagccatggttgctggtcctgacaagc 572
>gb|AY037218.1| Arabidopsis thaliana AT5g49720/K2I5_8 mRNA, complete cds Length = 2307 Score = 54.0 bits (27), Expect = 5e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 266 tgattatctggacactgcagatacaccagggtggtattgtggacctaatttctat 320 |||||||||||| |||| ||||| || || ||||| |||||||||||||||||| Sbjct: 1488 tgattatctggatgctgctgatactcctggatggtactgtggacctaatttctat 1542 Score = 40.1 bits (20), Expect = 8.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 537 ggagcaatggttgctgggcctgacaagc 564 ||||| ||||||||||| |||||||||| Sbjct: 1759 ggagccatggttgctggtcctgacaagc 1786
>gb|AY086165.1| Arabidopsis thaliana clone 21922 mRNA, complete sequence Length = 2303 Score = 54.0 bits (27), Expect = 5e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 266 tgattatctggacactgcagatacaccagggtggtattgtggacctaatttctat 320 |||||||||||| |||| ||||| || || ||||| |||||||||||||||||| Sbjct: 1488 tgattatctggatgctgctgatactcctggatggtactgtggacctaatttctat 1542 Score = 40.1 bits (20), Expect = 8.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 537 ggagcaatggttgctgggcctgacaagc 564 ||||| ||||||||||| |||||||||| Sbjct: 1759 ggagccatggttgctggtcctgacaagc 1786
>dbj|AB025613.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K2I5 Length = 71807 Score = 54.0 bits (27), Expect = 5e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 266 tgattatctggacactgcagatacaccagggtggtattgtggacctaatttctat 320 |||||||||||| |||| ||||| || || ||||| |||||||||||||||||| Sbjct: 35438 tgattatctggatgctgctgatactcctggatggtactgtggacctaatttctat 35384 Score = 40.1 bits (20), Expect = 8.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 537 ggagcaatggttgctgggcctgacaagc 564 ||||| ||||||||||| |||||||||| Sbjct: 34997 ggagccatggttgctggtcctgacaagc 34970
>gb|BT002221.1| Arabidopsis thaliana At5g49720/K2I5_8 mRNA, complete cds Length = 1866 Score = 54.0 bits (27), Expect = 5e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 266 tgattatctggacactgcagatacaccagggtggtattgtggacctaatttctat 320 |||||||||||| |||| ||||| || || ||||| |||||||||||||||||| Sbjct: 1368 tgattatctggatgctgctgatactcctggatggtactgtggacctaatttctat 1422 Score = 40.1 bits (20), Expect = 8.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 537 ggagcaatggttgctgggcctgacaagc 564 ||||| ||||||||||| |||||||||| Sbjct: 1639 ggagccatggttgctggtcctgacaagc 1666
>gb|U37702.1|ATU37702 Arabidopsis thaliana cellulase (OR16pep) mRNA, complete cds Length = 2257 Score = 54.0 bits (27), Expect = 5e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 266 tgattatctggacactgcagatacaccagggtggtattgtggacctaatttctat 320 |||||||||||| |||| ||||| || || ||||| |||||||||||||||||| Sbjct: 1438 tgattatctggatgctgctgatactcctggatggtactgtggacctaatttctat 1492 Score = 40.1 bits (20), Expect = 8.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 537 ggagcaatggttgctgggcctgacaagc 564 ||||| ||||||||||| |||||||||| Sbjct: 1709 ggagccatggttgctggtcctgacaagc 1736
>gb|AF073875.1|AF073875 Arabidopsis thaliana endo-1,4-beta-D-glucanase KORRIGAN (KOR) gene, KOR-1 allele, complete cds Length = 2873 Score = 54.0 bits (27), Expect = 5e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 266 tgattatctggacactgcagatacaccagggtggtattgtggacctaatttctat 320 |||||||||||| |||| ||||| || || ||||| |||||||||||||||||| Sbjct: 1884 tgattatctggatgctgctgatactcctggatggtactgtggacctaatttctat 1938 Score = 40.1 bits (20), Expect = 8.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 537 ggagcaatggttgctgggcctgacaagc 564 ||||| ||||||||||| |||||||||| Sbjct: 2325 ggagccatggttgctggtcctgacaagc 2352
>gb|AF074375.1|AF074375 Arabidopsis thaliana cellulase (DEC) mRNA, complete cds Length = 2179 Score = 54.0 bits (27), Expect = 5e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 266 tgattatctggacactgcagatacaccagggtggtattgtggacctaatttctat 320 |||||||||||| |||| ||||| || || ||||| |||||||||||||||||| Sbjct: 1431 tgattatctggatgctgctgatactcctggatggtactgtggacctaatttctat 1485 Score = 40.1 bits (20), Expect = 8.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 537 ggagcaatggttgctgggcctgacaagc 564 ||||| ||||||||||| |||||||||| Sbjct: 1702 ggagccatggttgctggtcctgacaagc 1729
>gb|AF074092.1|AF074092 Arabidopsis thaliana cellulase (DEC) gene, complete cds Length = 4033 Score = 54.0 bits (27), Expect = 5e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 266 tgattatctggacactgcagatacaccagggtggtattgtggacctaatttctat 320 |||||||||||| |||| ||||| || || ||||| |||||||||||||||||| Sbjct: 2723 tgattatctggatgctgctgatactcctggatggtactgtggacctaatttctat 2777 Score = 40.1 bits (20), Expect = 8.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 537 ggagcaatggttgctgggcctgacaagc 564 ||||| ||||||||||| |||||||||| Sbjct: 3164 ggagccatggttgctggtcctgacaagc 3191
>gb|AC114689.4| Homo sapiens chromosome 18, clone RP11-638L3, complete sequence Length = 177781 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Minus Query: 355 agcttgattacattctaggcaa 376 |||||||||||||||||||||| Sbjct: 3171 agcttgattacattctaggcaa 3150
>gb|AC079239.6| Homo sapiens BAC clone RP11-722M1 from 4, complete sequence Length = 182406 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Plus Query: 132 aatgtcatgtgctcatatttac 153 |||||||||||||||||||||| Sbjct: 83192 aatgtcatgtgctcatatttac 83213
>ref|NM_179018.1| Arabidopsis thaliana hydrolase, hydrolyzing O-glycosyl compounds AT4G09740 mRNA, complete cds Length = 1437 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 342 tttgcaaagtcacagcttgattacattct 370 ||||| ||||||||| ||||||||||||| Sbjct: 1099 tttgccaagtcacaggttgattacattct 1127
>emb|CR381708.8| Zebrafish DNA sequence from clone DKEYP-10H11 in linkage group 1, complete sequence Length = 161310 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 136 tcatgtgctcatatttaccagtatt 160 |||||||||||||||||||| |||| Sbjct: 69199 tcatgtgctcatatttaccaatatt 69175
>emb|AJ242807.1|BNA242807 Brassica napus Cel16 gene for endo-1,4-beta-D-glucanase (cellulase) Length = 5454 Score = 42.1 bits (21), Expect = 2.1 Identities = 36/41 (87%) Strand = Plus / Plus Query: 280 ctgcagatacaccagggtggtattgtggacctaatttctat 320 |||| ||||| || || ||||| |||||||||||||||||| Sbjct: 3694 ctgctgatactcctggatggtactgtggacctaatttctat 3734 Score = 40.1 bits (20), Expect = 8.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 537 ggagcaatggttgctgggcctgacaagc 564 ||||| ||||||||||| |||||||||| Sbjct: 4225 ggagccatggttgctggtcctgacaagc 4252
>gb|AC069359.5| Homo sapiens chromosome 8, clone CTD-2003P13, complete sequence Length = 86991 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 314 tttctataccacagatgtcct 334 ||||||||||||||||||||| Sbjct: 60177 tttctataccacagatgtcct 60157
>ref|XM_629076.1| Dictyostelium discoideum hypothetical protein (DDB0192074), partial mRNA Length = 3399 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 159 ttcaattcattcaacttcac 178 |||||||||||||||||||| Sbjct: 1086 ttcaattcattcaacttcac 1105
>emb|BX511137.14| Zebrafish DNA sequence from clone DKEY-192A11 in linkage group 7, complete sequence Length = 214145 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 96 gaagaaatattaaggacatt 115 |||||||||||||||||||| Sbjct: 23166 gaagaaatattaaggacatt 23147
>emb|AL773535.8| Human DNA sequence from clone DAQB-170I5 on chromosome 6 Contains the 5'end of the HCG18 gene for HLA complex group 18, the TRIM39 gene for tripartite motif-containing 39, the RPP21 gene for ribonuclease P 21kDa subunit, the HLA-N pseudogene for major histocompatibility complex, class I, N (pseudogene), the HCG19P pseudogene for HLA complex group 19, the UBQLN1P pseudogene for ubiquilin 1, and 2 CpG islands, complete sequence Length = 88074 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 70 tcttcctaagcccagggtat 89 |||||||||||||||||||| Sbjct: 2846 tcttcctaagcccagggtat 2827
>emb|BX248580.4| Human DNA sequence from clone DASS-179M10 on chromosome 6, complete sequence Length = 57170 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 70 tcttcctaagcccagggtat 89 |||||||||||||||||||| Sbjct: 21970 tcttcctaagcccagggtat 21951
>emb|AL662832.5| Human DNA sequence from clone XXbac-141O14 on chromosome 6 contains the 5' end of the TRIM26 gene for tripartite motif containing 26, two putative novel transcript, a tripartite motif containing 26 (TRIM26) pseudogene, a MHC class 1 pseudogene, the TRIM39 gene for tripartite motif containing 39, the RPP21 gene for ribonuclease p subunit and four CpG islands, complete sequence Length = 161348 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 70 tcttcctaagcccagggtat 89 |||||||||||||||||||| Sbjct: 118137 tcttcctaagcccagggtat 118118
>emb|AL662795.5| Human DNA sequence from clone XXbac-283O16 on chromosome 6 contains the TRIM39 gene for tripartite motif containing 39, the RPP21 gene for ribonuclease P subunit, a putative novel transcript and two CpG islands, complete sequence Length = 115104 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 70 tcttcctaagcccagggtat 89 |||||||||||||||||||| Sbjct: 41062 tcttcctaagcccagggtat 41043
>gb|DQ424856.1| Vitis vinifera cultivar Maxxa chloroplast, complete genome Length = 160928 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 157 tattcaattcattcaacttc 176 |||||||||||||||||||| Sbjct: 127503 tattcaattcattcaacttc 127522
>emb|AL606690.3|OSJN00080 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0060D06, complete sequence Length = 151506 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 466 gtgtcaaatatggatgcaaa 485 |||||||||||||||||||| Sbjct: 8515 gtgtcaaatatggatgcaaa 8534
>emb|AJ505579.1|LLU505579 Lupinus luteus mRNA for putative acid phosphatase (acpase2 gene) Length = 1701 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 249 cttgcctctctgtatgctga 268 |||||||||||||||||||| Sbjct: 1285 cttgcctctctgtatgctga 1266
>emb|CR759281.4| Human DNA sequence from clone DADB-50B12 on chromosome 6, complete sequence Length = 107020 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 70 tcttcctaagcccagggtat 89 |||||||||||||||||||| Sbjct: 39437 tcttcctaagcccagggtat 39418
>gb|AC092994.4| Homo sapiens 3 BAC RP11-656A15 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 159445 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 346 caaagtcacagcttgattac 365 |||||||||||||||||||| Sbjct: 24268 caaagtcacagcttgattac 24249
>dbj|AK081831.1| Mus musculus 16 days embryo head cDNA, RIKEN full-length enriched library, clone:C130080K17 product:hypothetical protein, full insert sequence Length = 1228 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 370 taggcaagaacccacaaaagatga 393 |||||||||||||| ||||||||| Sbjct: 808 taggcaagaacccagaaaagatga 785
>gb|AC148683.1| Macaca mulatta Major Histocompatibility Complex BAC MMU162B17, complete sequence Length = 181079 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 70 tcttcctaagcccagggtat 89 |||||||||||||||||||| Sbjct: 135624 tcttcctaagcccagggtat 135605
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 466 gtgtcaaatatggatgcaaa 485 |||||||||||||||||||| Sbjct: 33236254 gtgtcaaatatggatgcaaa 33236273
>emb|BX927189.6| Human DNA sequence from clone DAMA-83L10 on chromosome 6, complete sequence Length = 124330 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 70 tcttcctaagcccagggtat 89 |||||||||||||||||||| Sbjct: 113741 tcttcctaagcccagggtat 113722
>dbj|AB128049.1| Macaca mulatta genes, MHC class I region, partial and complete cds Length = 3284914 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 70 tcttcctaagcccagggtat 89 |||||||||||||||||||| Sbjct: 2086512 tcttcctaagcccagggtat 2086531
>emb|AL929240.18| Mouse DNA sequence from clone RP23-245A10 on chromosome 2, complete sequence Length = 180092 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 370 taggcaagaacccacaaaagatga 393 |||||||||||||| ||||||||| Sbjct: 173299 taggcaagaacccagaaaagatga 173322
>dbj|BA000025.2| Homo sapiens genomic DNA, chromosome 6p21.3, HLA Class I region Length = 2229817 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 70 tcttcctaagcccagggtat 89 |||||||||||||||||||| Sbjct: 1634491 tcttcctaagcccagggtat 1634510
>dbj|BA000041.2| Pan troglodytes DNA, major histocompatibility complex class I region Length = 1750601 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 70 tcttcctaagcccagggtat 89 |||||||||||||||||||| Sbjct: 1176330 tcttcctaagcccagggtat 1176349
>gb|AC154522.3| Mus musculus BAC clone RP23-480O9 from 13, complete sequence Length = 176876 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 340 agtttgcaaagtcacagctt 359 |||||||||||||||||||| Sbjct: 59351 agtttgcaaagtcacagctt 59370
>emb|BX470238.6| Zebrafish DNA sequence from clone DKEY-11F14 in linkage group 19, complete sequence Length = 145503 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 53 tctcagcaggttgcggctcttcct 76 |||||||||||||| ||||||||| Sbjct: 38799 tctcagcaggttgccgctcttcct 38822
>gb|DQ119551.1| Opisthorchis viverrini NADH dehydrogenase subunit 1 gene, partial cds; tRNA-Asn, tRNA-Pro, tRNA-Ile, and tRNA-Lys genes, complete sequence; and NADH dehydrogenase subunit 3 gene, complete cds; mitochondrial Length = 1357 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 586 gcacaaattacaattacaca 605 |||||||||||||||||||| Sbjct: 265 gcacaaattacaattacaca 246
>gb|AC115761.12| Mus musculus chromosome 7, clone RP23-62N10, complete sequence Length = 215013 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 100 aaatattaaggacattccacaacc 123 |||||||||| ||||||||||||| Sbjct: 77487 aaatattaagaacattccacaacc 77510
>emb|AL954672.9| Zebrafish DNA sequence from clone CH211-237K3 in linkage group 7, complete sequence Length = 180588 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 96 gaagaaatattaaggacatt 115 |||||||||||||||||||| Sbjct: 127029 gaagaaatattaaggacatt 127048
>gb|AC004188.1|AC004188 Homo sapiens clone UWGC:y17c090 from 6p21, complete sequence Length = 40057 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 70 tcttcctaagcccagggtat 89 |||||||||||||||||||| Sbjct: 29163 tcttcctaagcccagggtat 29182
>emb|AL606692.3|OSJN00105 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0059K02, complete sequence Length = 165745 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 466 gtgtcaaatatggatgcaaa 485 |||||||||||||||||||| Sbjct: 118903 gtgtcaaatatggatgcaaa 118922
>dbj|AB014087.1| Homo sapiens genomic DNA, chromosome 6p21.3, HLA class I region, Cosmid clone:TY6D9, complete sequence Length = 27356 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 70 tcttcctaagcccagggtat 89 |||||||||||||||||||| Sbjct: 2921 tcttcctaagcccagggtat 2940
>emb|AJ297524.1|MCI297524 Mucor circinelloides cigB gene, exons 1-7 Length = 4341 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 116 ccacaaccaaactgacaatg 135 |||||||||||||||||||| Sbjct: 2916 ccacaaccaaactgacaatg 2935
>emb|AL731554.13| Mouse DNA sequence from clone RP23-337H1 on chromosome 5, complete sequence Length = 159200 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 tccaggatctcaggttcttc 54 |||||||||||||||||||| Sbjct: 86629 tccaggatctcaggttcttc 86610 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,291,888 Number of Sequences: 3902068 Number of extensions: 5291888 Number of successful extensions: 96584 Number of sequences better than 10.0: 73 Number of HSP's better than 10.0 without gapping: 75 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 96162 Number of HSP's gapped (non-prelim): 404 length of query: 607 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 584 effective length of database: 17,143,297,704 effective search space: 10011685859136 effective search space used: 10011685859136 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
