ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags16o08
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK065376.1| Oryza sativa (japonica cultivar-group) cDNA clon... 684 0.0
2dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 125 2e-25
3dbj|AP003568.3| Oryza sativa (japonica cultivar-group) genomic D... 125 2e-25
4dbj|AP003523.3| Oryza sativa (japonica cultivar-group) genomic D... 125 2e-25
5ref|XM_481456.1| Oryza sativa (japonica cultivar-group), mRNA 88 4e-14
6dbj|AK063295.1| Oryza sativa (japonica cultivar-group) cDNA clon... 88 4e-14
7gb|AY360391.1| Oryza sativa (japonica cultivar-group) chromosome... 76 2e-10
8gb|AY360390.1| Oryza sativa (japonica cultivar-group) chromosome... 76 2e-10
9dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 76 2e-10
10dbj|AP005166.2| Oryza sativa (japonica cultivar-group) genomic D... 76 2e-10
11dbj|AP005162.2| Oryza sativa (japonica cultivar-group) genomic D... 76 2e-10
12gb|AF154643.1| Nicotiana tabacum clone PR19 mRNA sequence 68 4e-08
13ref|NM_179467.1| Arabidopsis thaliana ATMMH-1 (FORMAMIDOPYRIMIDI... 66 2e-07
14ref|NM_104128.2| Arabidopsis thaliana ATMMH-1 (FORMAMIDOPYRIMIDI... 66 2e-07
15emb|BX816179.1|CNS0ABR0 Arabidopsis thaliana Full-length cDNA Co... 66 2e-07
16gb|AF099971.1| Arabidopsis thaliana putative formamidopyrimidine... 66 2e-07
17gb|AF099970.1| Arabidopsis thaliana putative formamidopyrimidine... 66 2e-07
18ref|XM_572248.1| Cryptococcus neoformans var. neoformans JEC21 h... 46 0.14
19ref|XM_572249.1| Cryptococcus neoformans var. neoformans JEC21 h... 46 0.14
20dbj|AB010690.1| Arabidopsis thaliana mutM homologue gene, comple... 44 0.57
21gb|AC008016.2|F6D8 Arabidopsis thaliana chromosome 1 BAC F6D8 se... 44 0.57
22ref|XM_542077.2| PREDICTED: Canis familiaris similar to Compleme... 42 2.2
23emb|AL356288.15| Human DNA sequence from clone RP11-6E3 on chrom... 42 2.2
24gb|AC167816.4| Mus musculus BAC clone RP23-317F20 from chromosom... 40 8.8
25gb|AC170188.2| Mus musculus BAC clone RP24-195M20 from chromosom... 40 8.8
26ref|XM_424388.1| PREDICTED: Gallus gallus similar to BAG-family ... 40 8.8
27gb|AC133504.2| Mus musculus BAC clone RP24-174N6 from chromosome... 40 8.8
28gb|AC124675.9| Mus musculus chromosome 15, clone RP24-88M7, comp... 40 8.8
29gb|CP000352.1| Ralstonia metallidurans CH34, complete genome 40 8.8
30gb|AC134452.4| Mus musculus BAC clone RP24-252M6 from chromosome... 40 8.8
31gb|AC122049.2| Mus musculus BAC clone RP24-456N19 from 16, compl... 40 8.8
32emb|AL596217.6| Human DNA sequence from clone RP11-13J14 on chro... 40 8.8
33emb|CR931808.2| Medicago truncatula chromosome 5 clone mth2-144o... 40 8.8
34gb|AC149070.3| Xenopus tropicalis clone ISB1-185H2, complete seq... 40 8.8
35gb|AC093560.2| Homo sapiens chromosome 1 clone RP11-398H19, comp... 40 8.8
36gb|AC098685.7| Mus musculus clone ct7-393l21, complete sequence 40 8.8
37gb|AC011260.8| Homo sapiens, clone RP11-1E21, complete sequence 40 8.8
38gb|AC162374.4| Mus musculus BAC clone RP24-370I14 from chromosom... 40 8.8
39emb|CR390590.1| Gallus gallus finished cDNA, clone ChEST48k7 40 8.8
40dbj|AP006878.1| Thermococcus kodakarensis KOD1 DNA, complete genome 40 8.8
41dbj|BA000022.2| Synechocystis sp. PCC 6803 DNA, complete genome 40 8.8
42gb|AE017220.1| Salmonella enterica subsp. enterica serovar Chole... 40 8.8
43gb|AE017126.1| Prochlorococcus marinus subsp. marinus str. CCMP1... 40 8.8
44gb|AC165261.3| Mus musculus BAC clone RP23-103O7 from chromosome... 40 8.8
45gb|AC139381.4| Mus musculus BAC clone RP23-171D1 from 13, comple... 40 8.8
46gb|AC002070.1|HSAC002070 Human BAC clone 7E17 from 12q, complete... 40 8.8
47emb|AJ296970.1|MMU296970 Mus musculus SDS-stable vimentin-bound ... 40 8.8
48emb|AL844180.6| Mouse DNA sequence from clone RP23-403A4 on chro... 40 8.8
49emb|AL669959.22| Mouse DNA sequence from clone RP23-221H6 on chr... 40 8.8 
>dbj|AK065376.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013005H14, full
           insert sequence
          Length = 1650

 Score =  684 bits (345), Expect = 0.0
 Identities = 544/609 (89%), Gaps = 1/609 (0%)
 Strand = Plus / Plus

                                                                       
Query: 11  gggatggcaggtgcgatctacataaagggcgttgccgtcacaaagtacaagagatcagct 70
           ||||||||||||||||||||||| ||||| ||| | || || |||||||||||||||| |
Sbjct: 271 gggatggcaggtgcgatctacattaagggagttcctgtgaccaagtacaagagatcagtt 330

                                                                       
Query: 71  gtcaactccgcggacgactggccgtccaagtactccaagtttttcgtcgagcttgatgat 130
           ||||  ||  | ||||| ||||| |||||||||||||| ||||| ||  | |||||||||
Sbjct: 331 gtcagttctacagacgagtggccctccaagtactccaaattttttgttcaacttgatgat 390

                                                                       
Query: 131 ggcttggagttttccttcactgataagaggcgctttgcaagagttcggttatttgatgat 190
           ||||| |||||||||||||||||||||||||| ||||||||||||||||| ||||| |||
Sbjct: 391 ggcttagagttttccttcactgataagaggcggtttgcaagagttcggttgtttgaagat 450

                                                                       
Query: 191 cctgaaactgtacctccaatttctgagctaggtccggatgctctctttgagccgatgtcc 250
           || ||||||||||| || ||||||||| |||| || ||||||||||||||||||||||| 
Sbjct: 451 cccgaaactgtacccccgatttctgagttaggaccagatgctctctttgagccgatgtct 510

                                                                       
Query: 251 gttgacaattttgtggactcactgagcaagaagaagattggaataaaagctcttttgcta 310
             ||||| ||||| |||||| |||||||  |||||||||||||||||||||||| | || 
Sbjct: 511 tctgacagttttgcggactcgctgagcagaaagaagattggaataaaagctcttctactc 570

                                                                       
Query: 311 gatcagagcttcatatcaggcattggtaattggattgcagatgaggtactttaccagtcg 370
           |||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||
Sbjct: 571 gatcagagcttcatatcaggaattggtaattggattgcagatgaggtgctttaccagtcg 630

                                                                       
Query: 371 aaaacccatccattgcagattgcttcaagcctaacaagggagagttgtgaagcactacat 430
           | |||||||||||| |||||||||||||| ||| | ||||||||||||||||||||||| 
Sbjct: 631 agaacccatccattacagattgcttcaagtctatccagggagagttgtgaagcactacac 690

                                                                       
Query: 431 caaagcatccaagaggttgtgaaatatgctgtcgatgttgacgctgattgtgatcgcttt 490
           |||||||||||||||||||||||||||||||| || ||||| |||||||||||  |||||
Sbjct: 691 caaagcatccaagaggttgtgaaatatgctgttgaagttgatgctgattgtgactgcttt 750

                                                                       
Query: 491 cctgtggaatggttgtttcatcatcgctggggcaagaagcctggtaaagtcgatggaaag 550
           |||||||||||||| || ||||| || |||||||||||||||||||||||| ||||| ||
Sbjct: 751 cctgtggaatggttattccatcaccgatggggcaagaagcctggtaaagtcaatggacag 810

                                                                       
Query: 551 aaaattgaattcataacagctggtggcaggaccacagccctatgtgccagaactgcagaa 610
           |||||||| ||||||||||||||||||||||| |||| | || |||||| ||||||||||
Sbjct: 811 aaaattgagttcataacagctggtggcaggactacag-catacgtgccacaactgcagaa 869

                    
Query: 611 gctgactgg 619
           |||||||||
Sbjct: 870 gctgactgg 878
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score =  125 bits (63), Expect = 2e-25
 Identities = 81/87 (93%)
 Strand = Plus / Minus

                                                                            
Query: 365      cagtcgaaaacccatccattgcagattgcttcaagcctaacaagggagagttgtgaagca 424
                ||||||| |||||||||||| |||||||||||||| ||| | ||||||||||||||||||
Sbjct: 25847556 cagtcgagaacccatccattacagattgcttcaagtctatccagggagagttgtgaagca 25847497

                                           
Query: 425      ctacatcaaagcatccaagaggttgtg 451
                ||||| |||||||||||||||||||||
Sbjct: 25847496 ctacaccaaagcatccaagaggttgtg 25847470



 Score =  125 bits (63), Expect = 2e-25
 Identities = 93/103 (90%)
 Strand = Plus / Minus

                                                                            
Query: 444      aggttgtgaaatatgctgtcgatgttgacgctgattgtgatcgctttcctgtggaatggt 503
                ||||||||||||||||||| || ||||| |||||||||||  ||||||||||||||||||
Sbjct: 25847384 aggttgtgaaatatgctgttgaagttgatgctgattgtgactgctttcctgtggaatggt 25847325

                                                           
Query: 504      tgtttcatcatcgctggggcaagaagcctggtaaagtcgatgg 546
                | || ||||| || |||||||||||||||||||||||| ||||
Sbjct: 25847324 tattccatcaccgatggggcaagaagcctggtaaagtcaatgg 25847282



 Score =  117 bits (59), Expect = 5e-23
 Identities = 98/111 (88%)
 Strand = Plus / Minus

                                                                            
Query: 194      gaaactgtacctccaatttctgagctaggtccggatgctctctttgagccgatgtccgtt 253
                ||||||||||| || ||||||||| |||| || |||||||||||||||||||||||   |
Sbjct: 25847926 gaaactgtacccccgatttctgagttaggaccagatgctctctttgagccgatgtcttct 25847867

                                                                   
Query: 254      gacaattttgtggactcactgagcaagaagaagattggaataaaagctctt 304
                |||| ||||| |||||| |||||||  ||||||||||||||||||||||||
Sbjct: 25847866 gacagttttgcggactcgctgagcagaaagaagattggaataaaagctctt 25847816



 Score =  109 bits (55), Expect = 1e-20
 Identities = 64/67 (95%)
 Strand = Plus / Minus

                                                                            
Query: 120      agcttgatgatggcttggagttttccttcactgataagaggcgctttgcaagagttcggt 179
                |||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 25848091 agcttgatgatggcttagagttttccttcactgataagaggcggtttgcaagagttcggt 25848032

                       
Query: 180      tatttga 186
                | |||||
Sbjct: 25848031 tgtttga 25848025



 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 52/54 (96%)
 Strand = Plus / Minus

                                                                      
Query: 314      cagagcttcatatcaggcattggtaattggattgcagatgaggtactttaccag 367
                ||||||||||||||||| |||||||||||||||||||||||||| |||||||||
Sbjct: 25847681 cagagcttcatatcaggaattggtaattggattgcagatgaggtgctttaccag 25847628



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 47/53 (88%)
 Strand = Plus / Minus

                                                                     
Query: 11       gggatggcaggtgcgatctacataaagggcgttgccgtcacaaagtacaagag 63
                ||||||||||||||||||||||| ||||| ||| | || || |||||||||||
Sbjct: 25848818 gggatggcaggtgcgatctacattaagggagttcctgtgaccaagtacaagag 25848766



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 31/32 (96%)
 Strand = Plus / Minus

                                                
Query: 549      agaaaattgaattcataacagctggtggcagg 580
                |||||||||| |||||||||||||||||||||
Sbjct: 25847136 agaaaattgagttcataacagctggtggcagg 25847105



 Score = 44.1 bits (22), Expect = 0.57
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                          
Query: 594      gtgccagaactgcagaagctgactgg 619
                |||||| |||||||||||||||||||
Sbjct: 25847002 gtgccacaactgcagaagctgactgg 25846977



 Score = 40.1 bits (20), Expect = 8.8
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                                
Query: 83       gacgactggccgtccaagtactccaagttttt 114
                ||||| ||||| |||||||||||||| |||||
Sbjct: 25848672 gacgagtggccctccaagtactccaaattttt 25848641
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>dbj|AP003568.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
            clone:P0017B12
          Length = 157424

 Score =  125 bits (63), Expect = 2e-25
 Identities = 81/87 (93%)
 Strand = Plus / Minus

                                                                        
Query: 365  cagtcgaaaacccatccattgcagattgcttcaagcctaacaagggagagttgtgaagca 424
            ||||||| |||||||||||| |||||||||||||| ||| | ||||||||||||||||||
Sbjct: 2654 cagtcgagaacccatccattacagattgcttcaagtctatccagggagagttgtgaagca 2595

                                       
Query: 425  ctacatcaaagcatccaagaggttgtg 451
            ||||| |||||||||||||||||||||
Sbjct: 2594 ctacaccaaagcatccaagaggttgtg 2568



 Score =  125 bits (63), Expect = 2e-25
 Identities = 93/103 (90%)
 Strand = Plus / Minus

                                                                        
Query: 444  aggttgtgaaatatgctgtcgatgttgacgctgattgtgatcgctttcctgtggaatggt 503
            ||||||||||||||||||| || ||||| |||||||||||  ||||||||||||||||||
Sbjct: 2482 aggttgtgaaatatgctgttgaagttgatgctgattgtgactgctttcctgtggaatggt 2423

                                                       
Query: 504  tgtttcatcatcgctggggcaagaagcctggtaaagtcgatgg 546
            | || ||||| || |||||||||||||||||||||||| ||||
Sbjct: 2422 tattccatcaccgatggggcaagaagcctggtaaagtcaatgg 2380



 Score =  117 bits (59), Expect = 5e-23
 Identities = 98/111 (88%)
 Strand = Plus / Minus

                                                                        
Query: 194  gaaactgtacctccaatttctgagctaggtccggatgctctctttgagccgatgtccgtt 253
            ||||||||||| || ||||||||| |||| || |||||||||||||||||||||||   |
Sbjct: 3024 gaaactgtacccccgatttctgagttaggaccagatgctctctttgagccgatgtcttct 2965

                                                               
Query: 254  gacaattttgtggactcactgagcaagaagaagattggaataaaagctctt 304
            |||| ||||| |||||| |||||||  ||||||||||||||||||||||||
Sbjct: 2964 gacagttttgcggactcgctgagcagaaagaagattggaataaaagctctt 2914



 Score =  109 bits (55), Expect = 1e-20
 Identities = 64/67 (95%)
 Strand = Plus / Minus

                                                                        
Query: 120  agcttgatgatggcttggagttttccttcactgataagaggcgctttgcaagagttcggt 179
            |||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 3189 agcttgatgatggcttagagttttccttcactgataagaggcggtttgcaagagttcggt 3130

                   
Query: 180  tatttga 186
            | |||||
Sbjct: 3129 tgtttga 3123



 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 52/54 (96%)
 Strand = Plus / Minus

                                                                  
Query: 314  cagagcttcatatcaggcattggtaattggattgcagatgaggtactttaccag 367
            ||||||||||||||||| |||||||||||||||||||||||||| |||||||||
Sbjct: 2779 cagagcttcatatcaggaattggtaattggattgcagatgaggtgctttaccag 2726



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 47/53 (88%)
 Strand = Plus / Minus

                                                                 
Query: 11   gggatggcaggtgcgatctacataaagggcgttgccgtcacaaagtacaagag 63
            ||||||||||||||||||||||| ||||| ||| | || || |||||||||||
Sbjct: 3916 gggatggcaggtgcgatctacattaagggagttcctgtgaccaagtacaagag 3864



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 31/32 (96%)
 Strand = Plus / Minus

                                            
Query: 549  agaaaattgaattcataacagctggtggcagg 580
            |||||||||| |||||||||||||||||||||
Sbjct: 2234 agaaaattgagttcataacagctggtggcagg 2203



 Score = 44.1 bits (22), Expect = 0.57
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 594  gtgccagaactgcagaagctgactgg 619
            |||||| |||||||||||||||||||
Sbjct: 2100 gtgccacaactgcagaagctgactgg 2075



 Score = 40.1 bits (20), Expect = 8.8
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 83   gacgactggccgtccaagtactccaagttttt 114
            ||||| ||||| |||||||||||||| |||||
Sbjct: 3770 gacgagtggccctccaagtactccaaattttt 3739
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>dbj|AP003523.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0416A11
          Length = 171519

 Score =  125 bits (63), Expect = 2e-25
 Identities = 81/87 (93%)
 Strand = Plus / Minus

                                                                          
Query: 365    cagtcgaaaacccatccattgcagattgcttcaagcctaacaagggagagttgtgaagca 424
              ||||||| |||||||||||| |||||||||||||| ||| | ||||||||||||||||||
Sbjct: 129760 cagtcgagaacccatccattacagattgcttcaagtctatccagggagagttgtgaagca 129701

                                         
Query: 425    ctacatcaaagcatccaagaggttgtg 451
              ||||| |||||||||||||||||||||
Sbjct: 129700 ctacaccaaagcatccaagaggttgtg 129674



 Score =  125 bits (63), Expect = 2e-25
 Identities = 93/103 (90%)
 Strand = Plus / Minus

                                                                          
Query: 444    aggttgtgaaatatgctgtcgatgttgacgctgattgtgatcgctttcctgtggaatggt 503
              ||||||||||||||||||| || ||||| |||||||||||  ||||||||||||||||||
Sbjct: 129588 aggttgtgaaatatgctgttgaagttgatgctgattgtgactgctttcctgtggaatggt 129529

                                                         
Query: 504    tgtttcatcatcgctggggcaagaagcctggtaaagtcgatgg 546
              | || ||||| || |||||||||||||||||||||||| ||||
Sbjct: 129528 tattccatcaccgatggggcaagaagcctggtaaagtcaatgg 129486



 Score =  117 bits (59), Expect = 5e-23
 Identities = 98/111 (88%)
 Strand = Plus / Minus

                                                                          
Query: 194    gaaactgtacctccaatttctgagctaggtccggatgctctctttgagccgatgtccgtt 253
              ||||||||||| || ||||||||| |||| || |||||||||||||||||||||||   |
Sbjct: 130130 gaaactgtacccccgatttctgagttaggaccagatgctctctttgagccgatgtcttct 130071

                                                                 
Query: 254    gacaattttgtggactcactgagcaagaagaagattggaataaaagctctt 304
              |||| ||||| |||||| |||||||  ||||||||||||||||||||||||
Sbjct: 130070 gacagttttgcggactcgctgagcagaaagaagattggaataaaagctctt 130020



 Score =  109 bits (55), Expect = 1e-20
 Identities = 64/67 (95%)
 Strand = Plus / Minus

                                                                          
Query: 120    agcttgatgatggcttggagttttccttcactgataagaggcgctttgcaagagttcggt 179
              |||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 130295 agcttgatgatggcttagagttttccttcactgataagaggcggtttgcaagagttcggt 130236

                     
Query: 180    tatttga 186
              | |||||
Sbjct: 130235 tgtttga 130229



 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 52/54 (96%)
 Strand = Plus / Minus

                                                                    
Query: 314    cagagcttcatatcaggcattggtaattggattgcagatgaggtactttaccag 367
              ||||||||||||||||| |||||||||||||||||||||||||| |||||||||
Sbjct: 129885 cagagcttcatatcaggaattggtaattggattgcagatgaggtgctttaccag 129832



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 47/53 (88%)
 Strand = Plus / Minus

                                                                   
Query: 11     gggatggcaggtgcgatctacataaagggcgttgccgtcacaaagtacaagag 63
              ||||||||||||||||||||||| ||||| ||| | || || |||||||||||
Sbjct: 131022 gggatggcaggtgcgatctacattaagggagttcctgtgaccaagtacaagag 130970



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 31/32 (96%)
 Strand = Plus / Minus

                                              
Query: 549    agaaaattgaattcataacagctggtggcagg 580
              |||||||||| |||||||||||||||||||||
Sbjct: 129340 agaaaattgagttcataacagctggtggcagg 129309



 Score = 44.1 bits (22), Expect = 0.57
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 594    gtgccagaactgcagaagctgactgg 619
              |||||| |||||||||||||||||||
Sbjct: 129206 gtgccacaactgcagaagctgactgg 129181



 Score = 40.1 bits (20), Expect = 8.8
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                              
Query: 83     gacgactggccgtccaagtactccaagttttt 114
              ||||| ||||| |||||||||||||| |||||
Sbjct: 130876 gacgagtggccctccaagtactccaaattttt 130845
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>ref|XM_481456.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 909

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 65/72 (90%)
 Strand = Plus / Plus

                                                                       
Query: 292 aataaaagctcttttgctagatcagagcttcatatcaggcattggtaattggattgcaga 351
           ||||||||| |||||||| ||||||||||| |||||||| ||||| ||||||||||||||
Sbjct: 171 aataaaagcccttttgcttgatcagagctttatatcaggaattggcaattggattgcaga 230

                       
Query: 352 tgaggtacttta 363
           ||| || |||||
Sbjct: 231 tgaagtgcttta 242



 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 82/95 (86%)
 Strand = Plus / Plus

                                                                       
Query: 125 gatgatggcttggagttttccttcactgataagaggcgctttgcaagagttcggttattt 184
           |||||||| ||||||||||||||||||||||||||||| ||||||| | |||| ||  ||
Sbjct: 4   gatgatggtttggagttttccttcactgataagaggcgttttgcaaaaattcgctttctt 63

                                              
Query: 185 gatgatcctgaaactgtacctccaatttctgagct 219
           ||  |||| ||| |||| || ||||||||||||||
Sbjct: 64  gacaatccagaagctgtcccaccaatttctgagct 98



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 58/67 (86%), Gaps = 1/67 (1%)
 Strand = Plus / Plus

                                                                       
Query: 548 aagaaaattgaattcataacagctggtggcaggaccacagccctatgtgccagaactgca 607
           ||||||||||| ||||| |||| ||||||||||||  ||| | |||||||||||  ||||
Sbjct: 430 aagaaaattgacttcattacagttggtggcaggacttcag-catatgtgccagagttgca 488

                  
Query: 608 gaagctg 614
           |||||||
Sbjct: 489 gaagctg 495
to top
>dbj|AK063295.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-113-E09, full
           insert sequence
          Length = 1574

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 65/72 (90%)
 Strand = Plus / Plus

                                                                       
Query: 292 aataaaagctcttttgctagatcagagcttcatatcaggcattggtaattggattgcaga 351
           ||||||||| |||||||| ||||||||||| |||||||| ||||| ||||||||||||||
Sbjct: 525 aataaaagcccttttgcttgatcagagctttatatcaggaattggcaattggattgcaga 584

                       
Query: 352 tgaggtacttta 363
           ||| || |||||
Sbjct: 585 tgaagtgcttta 596



 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 82/95 (86%)
 Strand = Plus / Plus

                                                                       
Query: 125 gatgatggcttggagttttccttcactgataagaggcgctttgcaagagttcggttattt 184
           |||||||| ||||||||||||||||||||||||||||| ||||||| | |||| ||  ||
Sbjct: 358 gatgatggtttggagttttccttcactgataagaggcgttttgcaaaaattcgctttctt 417

                                              
Query: 185 gatgatcctgaaactgtacctccaatttctgagct 219
           ||  |||| ||| |||| || ||||||||||||||
Sbjct: 418 gacaatccagaagctgtcccaccaatttctgagct 452



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 58/67 (86%), Gaps = 1/67 (1%)
 Strand = Plus / Plus

                                                                       
Query: 548 aagaaaattgaattcataacagctggtggcaggaccacagccctatgtgccagaactgca 607
           ||||||||||| ||||| |||| ||||||||||||  ||| | |||||||||||  ||||
Sbjct: 766 aagaaaattgacttcattacagttggtggcaggacttcag-catatgtgccagagttgca 824

                  
Query: 608 gaagctg 614
           |||||||
Sbjct: 825 gaagctg 831
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>gb|AY360391.1| Oryza sativa (japonica cultivar-group) chromosome 8 BAC OSJNBa0023H09,
             complete sequence
          Length = 178320

 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 44/46 (95%)
 Strand = Plus / Minus

                                                           
Query: 125   gatgatggcttggagttttccttcactgataagaggcgctttgcaa 170
             |||||||| ||||||||||||||||||||||||||||| |||||||
Sbjct: 32149 gatgatggtttggagttttccttcactgataagaggcgttttgcaa 32104



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 46/51 (90%)
 Strand = Plus / Minus

                                                                
Query: 313   tcagagcttcatatcaggcattggtaattggattgcagatgaggtacttta 363
             ||||||||| |||||||| ||||| ||||||||||||||||| || |||||
Sbjct: 31554 tcagagctttatatcaggaattggcaattggattgcagatgaagtgcttta 31504



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                              
Query: 548   aagaaaattgaattcataacagctggtggcagg 580
             ||||||||||| ||||| |||| ||||||||||
Sbjct: 28960 aagaaaattgacttcattacagttggtggcagg 28928
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>gb|AY360390.1| Oryza sativa (japonica cultivar-group) chromosome 8 BAC OSJNBa0074N12,
             complete sequence
          Length = 187972

 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 44/46 (95%)
 Strand = Plus / Plus

                                                           
Query: 125   gatgatggcttggagttttccttcactgataagaggcgctttgcaa 170
             |||||||| ||||||||||||||||||||||||||||| |||||||
Sbjct: 44786 gatgatggtttggagttttccttcactgataagaggcgttttgcaa 44831



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 46/51 (90%)
 Strand = Plus / Plus

                                                                
Query: 313   tcagagcttcatatcaggcattggtaattggattgcagatgaggtacttta 363
             ||||||||| |||||||| ||||| ||||||||||||||||| || |||||
Sbjct: 45381 tcagagctttatatcaggaattggcaattggattgcagatgaagtgcttta 45431



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                              
Query: 548   aagaaaattgaattcataacagctggtggcagg 580
             ||||||||||| ||||| |||| ||||||||||
Sbjct: 47975 aagaaaattgacttcattacagttggtggcagg 48007
to top
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 44/46 (95%)
 Strand = Plus / Plus

                                                              
Query: 125      gatgatggcttggagttttccttcactgataagaggcgctttgcaa 170
                |||||||| ||||||||||||||||||||||||||||| |||||||
Sbjct: 12707607 gatgatggtttggagttttccttcactgataagaggcgttttgcaa 12707652



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 46/51 (90%)
 Strand = Plus / Plus

                                                                   
Query: 313      tcagagcttcatatcaggcattggtaattggattgcagatgaggtacttta 363
                ||||||||| |||||||| ||||| ||||||||||||||||| || |||||
Sbjct: 12708202 tcagagctttatatcaggaattggcaattggattgcagatgaagtgcttta 12708252



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                                 
Query: 548      aagaaaattgaattcataacagctggtggcagg 580
                ||||||||||| ||||| |||| ||||||||||
Sbjct: 12710796 aagaaaattgacttcattacagttggtggcagg 12710828
to top
>dbj|AP005166.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBa0058D03
          Length = 184235

 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 44/46 (95%)
 Strand = Plus / Plus

                                                           
Query: 125   gatgatggcttggagttttccttcactgataagaggcgctttgcaa 170
             |||||||| ||||||||||||||||||||||||||||| |||||||
Sbjct: 51602 gatgatggtttggagttttccttcactgataagaggcgttttgcaa 51647



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 46/51 (90%)
 Strand = Plus / Plus

                                                                
Query: 313   tcagagcttcatatcaggcattggtaattggattgcagatgaggtacttta 363
             ||||||||| |||||||| ||||| ||||||||||||||||| || |||||
Sbjct: 52197 tcagagctttatatcaggaattggcaattggattgcagatgaagtgcttta 52247



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                              
Query: 548   aagaaaattgaattcataacagctggtggcagg 580
             ||||||||||| ||||| |||| ||||||||||
Sbjct: 54791 aagaaaattgacttcattacagttggtggcagg 54823
to top
>dbj|AP005162.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBa0051M20
          Length = 152702

 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 44/46 (95%)
 Strand = Plus / Plus

                                                           
Query: 125   gatgatggcttggagttttccttcactgataagaggcgctttgcaa 170
             |||||||| ||||||||||||||||||||||||||||| |||||||
Sbjct: 93576 gatgatggtttggagttttccttcactgataagaggcgttttgcaa 93621



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 46/51 (90%)
 Strand = Plus / Plus

                                                                
Query: 313   tcagagcttcatatcaggcattggtaattggattgcagatgaggtacttta 363
             ||||||||| |||||||| ||||| ||||||||||||||||| || |||||
Sbjct: 94171 tcagagctttatatcaggaattggcaattggattgcagatgaagtgcttta 94221



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                              
Query: 548   aagaaaattgaattcataacagctggtggcagg 580
             ||||||||||| ||||| |||| ||||||||||
Sbjct: 96765 aagaaaattgacttcattacagttggtggcagg 96797
to top
>gb|AF154643.1| Nicotiana tabacum clone PR19 mRNA sequence
          Length = 1035

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 73/86 (84%)
 Strand = Plus / Plus

                                                                       
Query: 497 gaatggttgtttcatcatcgctggggcaagaagcctggtaaagtcgatggaaagaaaatt 556
           ||||||||||||||| | || |||||||| |||||||| |||||  |||| |||||||| 
Sbjct: 487 gaatggttgtttcattaccgatggggcaaaaagcctggaaaagttaatgggaagaaaata 546

                                     
Query: 557 gaattcataacagctggtggcaggac 582
           || || || || ||||||||||||||
Sbjct: 547 gagtttatcacggctggtggcaggac 572
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>ref|NM_179467.1| Arabidopsis thaliana ATMMH-1 (FORMAMIDOPYRIMIDINE-DNA GLYCOSYLASE
           1) AT1G52500 (ATMMH-1) transcript variant AT1G52500.1
           mRNA, complete cds
          Length = 1701

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 75/89 (84%)
 Strand = Plus / Plus

                                                                       
Query: 89  tggccgtccaagtactccaagtttttcgtcgagcttgatgatggcttggagttttccttc 148
           ||||| || ||||| || ||||| ||||||||||||||||||||  ||||| |||| || 
Sbjct: 367 tggccatctaagtattcaaagttcttcgtcgagcttgatgatggtctggagctttcattt 426

                                        
Query: 149 actgataagaggcgctttgcaagagttcg 177
           |||||||||||| | ||||| | ||||||
Sbjct: 427 actgataagaggagatttgccaaagttcg 455



 Score = 46.1 bits (23), Expect = 0.14
 Identities = 54/63 (85%), Gaps = 1/63 (1%)
 Strand = Plus / Plus

                                                                        
Query: 548  aagaaaattgaattcataacagctggtggcaggaccacagccctatgtgccagaactgca 607
            ||||| ||||| ||||| || |||||||| ||||| |||||  ||||| |||||||||||
Sbjct: 1179 aagaagattgatttcattactgctggtggaaggacaacagct-tatgttccagaactgca 1237

               
Query: 608  gaa 610
            |||
Sbjct: 1238 gaa 1240



 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 488 tttcctgtggaatggttgtttcat 511
           |||||||| |||||||||||||||
Sbjct: 766 tttcctgttgaatggttgtttcat 789
to top
>ref|NM_104128.2| Arabidopsis thaliana ATMMH-1 (FORMAMIDOPYRIMIDINE-DNA GLYCOSYLASE
           1) AT1G52500 (ATMMH-1) transcript variant AT1G52500.2
           mRNA, complete cds
          Length = 1491

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 75/89 (84%)
 Strand = Plus / Plus

                                                                       
Query: 89  tggccgtccaagtactccaagtttttcgtcgagcttgatgatggcttggagttttccttc 148
           ||||| || ||||| || ||||| ||||||||||||||||||||  ||||| |||| || 
Sbjct: 367 tggccatctaagtattcaaagttcttcgtcgagcttgatgatggtctggagctttcattt 426

                                        
Query: 149 actgataagaggcgctttgcaagagttcg 177
           |||||||||||| | ||||| | ||||||
Sbjct: 427 actgataagaggagatttgccaaagttcg 455



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 59/69 (85%), Gaps = 1/69 (1%)
 Strand = Plus / Plus

                                                                       
Query: 542 gatggaaagaaaattgaattcataacagctggtggcaggaccacagccctatgtgccaga 601
           ||||| ||||| ||||| ||||| || |||||||| ||||| |||||  ||||| |||||
Sbjct: 823 gatgggaagaagattgatttcattactgctggtggaaggacaacagct-tatgttccaga 881

                    
Query: 602 actgcagaa 610
           |||||||||
Sbjct: 882 actgcagaa 890
to top
>emb|BX816179.1|CNS0ABR0 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH32ZD06 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1444

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 75/89 (84%)
 Strand = Plus / Plus

                                                                       
Query: 89  tggccgtccaagtactccaagtttttcgtcgagcttgatgatggcttggagttttccttc 148
           ||||| || ||||| || ||||| ||||||||||||||||||||  ||||| |||| || 
Sbjct: 358 tggccatctaagtattcaaagttcttcgtcgagcttgatgatggtctggagctttcattt 417

                                        
Query: 149 actgataagaggcgctttgcaagagttcg 177
           |||||||||||| | ||||| | ||||||
Sbjct: 418 actgataagaggagatttgccaaagttcg 446



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 59/69 (85%), Gaps = 1/69 (1%)
 Strand = Plus / Plus

                                                                       
Query: 542 gatggaaagaaaattgaattcataacagctggtggcaggaccacagccctatgtgccaga 601
           ||||| ||||| ||||| ||||| || |||||||| ||||| |||||  ||||| |||||
Sbjct: 814 gatgggaagaagattgatttcattactgctggtggaaggacaacagct-tatgttccaga 872

                    
Query: 602 actgcagaa 610
           |||||||||
Sbjct: 873 actgcagaa 881
to top
>gb|AF099971.1| Arabidopsis thaliana putative formamidopyrimidine-DNA glycosylase 2
           (fpg2) mRNA, complete cds
          Length = 1294

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 75/89 (84%)
 Strand = Plus / Plus

                                                                       
Query: 89  tggccgtccaagtactccaagtttttcgtcgagcttgatgatggcttggagttttccttc 148
           ||||| || ||||| || ||||| ||||||||||||||||||||  ||||| |||| || 
Sbjct: 357 tggccatctaagtattcaaagttcttcgtcgagcttgatgatggtctggagctttcattt 416

                                        
Query: 149 actgataagaggcgctttgcaagagttcg 177
           |||||||||||| | ||||| | ||||||
Sbjct: 417 actgataagaggagatttgccaaagttcg 445



 Score = 40.1 bits (20), Expect = 8.8
 Identities = 53/63 (84%), Gaps = 1/63 (1%)
 Strand = Plus / Plus

                                                                        
Query: 548  aagaaaattgaattcataacagctggtggcaggaccacagccctatgtgccagaactgca 607
            ||||| ||||| ||||| || |||||||| ||||| |||||  ||||| ||| |||||||
Sbjct: 1169 aagaagattgatttcattactgctggtggaaggacaacagct-tatgttccanaactgca 1227

               
Query: 608  gaa 610
            |||
Sbjct: 1228 gaa 1230



 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 488 tttcctgtggaatggttgtttcat 511
           |||||||| |||||||||||||||
Sbjct: 756 tttcctgttgaatggttgtttcat 779
to top
>gb|AF099970.1| Arabidopsis thaliana putative formamidopyrimidine-DNA glycosylase 1
           (fpg1) mRNA, complete cds
          Length = 1481

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 75/89 (84%)
 Strand = Plus / Plus

                                                                       
Query: 89  tggccgtccaagtactccaagtttttcgtcgagcttgatgatggcttggagttttccttc 148
           ||||| || ||||| || ||||| ||||||||||||||||||||  ||||| |||| || 
Sbjct: 357 tggccatctaagtattcaaagttcttcgtcgagcttgatgatggtctggagctttcattt 416

                                        
Query: 149 actgataagaggcgctttgcaagagttcg 177
           |||||||||||| | ||||| | ||||||
Sbjct: 417 actgataagaggagatttgccaaagttcg 445



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 59/69 (85%), Gaps = 1/69 (1%)
 Strand = Plus / Plus

                                                                       
Query: 542 gatggaaagaaaattgaattcataacagctggtggcaggaccacagccctatgtgccaga 601
           ||||| ||||| ||||| ||||| || |||||||| ||||| |||||  ||||| |||||
Sbjct: 813 gatgggaagaagattgatttcattactgctggtggaaggacaacagct-tatgttccaga 871

                    
Query: 602 actgcagaa 610
           |||||||||
Sbjct: 872 actgcagaa 880
to top
>ref|XM_572248.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein
           (CNH00550) partial mRNA
          Length = 1719

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 333 ttggtaattggattgcagatgaggtactttaccag 367
           |||| |||||| ||||||| |||||||||||||||
Sbjct: 605 ttggcaattgggttgcagacgaggtactttaccag 639
to top
>ref|XM_572249.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein
           (CNH00550) partial mRNA
          Length = 1559

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 333 ttggtaattggattgcagatgaggtactttaccag 367
           |||| |||||| ||||||| |||||||||||||||
Sbjct: 605 ttggcaattgggttgcagacgaggtactttaccag 639
to top
>dbj|AB010690.1| Arabidopsis thaliana mutM homologue gene, complete cds
          Length = 3921

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 49/58 (84%)
 Strand = Plus / Plus

                                                                      
Query: 120  agcttgatgatggcttggagttttccttcactgataagaggcgctttgcaagagttcg 177
            |||||||||||||  ||||| |||| || |||||||||||| | ||||| | ||||||
Sbjct: 1038 agcttgatgatggtctggagctttcatttactgataagaggagatttgccaaagttcg 1095



 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 488  tttcctgtggaatggttgtttcat 511
            |||||||| |||||||||||||||
Sbjct: 1998 tttcctgttgaatggttgtttcat 2021
to top
>gb|AC008016.2|F6D8 Arabidopsis thaliana chromosome 1 BAC F6D8 sequence, complete sequence
          Length = 117737

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 49/58 (84%)
 Strand = Plus / Minus

                                                                       
Query: 120   agcttgatgatggcttggagttttccttcactgataagaggcgctttgcaagagttcg 177
             |||||||||||||  ||||| |||| || |||||||||||| | ||||| | ||||||
Sbjct: 84833 agcttgatgatggtctggagctttcatttactgataagaggagatttgccaaagttcg 84776



 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 488   tttcctgtggaatggttgtttcat 511
             |||||||| |||||||||||||||
Sbjct: 83873 tttcctgttgaatggttgtttcat 83850
to top
>ref|XM_542077.2| PREDICTED: Canis familiaris similar to Complement C3 precursor
            (LOC484960), mRNA
          Length = 5634

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 122  cttgatgatggcttggagttt 142
            |||||||||||||||||||||
Sbjct: 4332 cttgatgatggcttggagttt 4312
to top
>emb|AL356288.15| Human DNA sequence from clone RP11-6E3 on chromosome 1, complete sequence
          Length = 184469

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 282    agaagattggaataaaagctc 302
              |||||||||||||||||||||
Sbjct: 166256 agaagattggaataaaagctc 166276
to top
>gb|AC167816.4| Mus musculus BAC clone RP23-317F20 from chromosome 9, complete sequence
          Length = 198915

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 304    tttgctagatcagagcttca 323
              ||||||||||||||||||||
Sbjct: 130325 tttgctagatcagagcttca 130344
to top
>gb|AC170188.2| Mus musculus BAC clone RP24-195M20 from chromosome 13, complete
             sequence
          Length = 165687

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 433   aagcatccaagaggttgtga 452
             ||||||||||||||||||||
Sbjct: 73703 aagcatccaagaggttgtga 73722
to top
>ref|XM_424388.1| PREDICTED: Gallus gallus similar to BAG-family molecular chaperone
            regulator-4 (Silencer of death domains) (LOC426776), mRNA
          Length = 1787

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 269  tcactgagcaagaagaagat 288
            ||||||||||||||||||||
Sbjct: 1253 tcactgagcaagaagaagat 1272
to top
>gb|AC133504.2| Mus musculus BAC clone RP24-174N6 from chromosome 15, complete sequence
          Length = 145186

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 489   ttcctgtggaatggttgttt 508
             ||||||||||||||||||||
Sbjct: 43430 ttcctgtggaatggttgttt 43411
to top
>gb|AC124675.9| Mus musculus chromosome 15, clone RP24-88M7, complete sequence
          Length = 207904

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 489    ttcctgtggaatggttgttt 508
              ||||||||||||||||||||
Sbjct: 146601 ttcctgtggaatggttgttt 146582
to top
>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome
          Length = 3928089

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 114     tcgtcgagcttgatgatggcttgg 137
               |||| |||||||||||||||||||
Sbjct: 2368383 tcgtagagcttgatgatggcttgg 2368360
to top
>gb|AC134452.4| Mus musculus BAC clone RP24-252M6 from chromosome 16, complete sequence
          Length = 149607

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 495    tggaatggttgtttcatcat 514
              ||||||||||||||||||||
Sbjct: 140260 tggaatggttgtttcatcat 140279
to top
>gb|AC122049.2| Mus musculus BAC clone RP24-456N19 from 16, complete sequence
          Length = 167576

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 495   tggaatggttgtttcatcat 514
             ||||||||||||||||||||
Sbjct: 81227 tggaatggttgtttcatcat 81208
to top
>emb|AL596217.6| Human DNA sequence from clone RP11-13J14 on chromosome 1 Contains a CpG
              island, complete sequence
          Length = 183774

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 437    atccaagaggttgtgaaata 456
              ||||||||||||||||||||
Sbjct: 182013 atccaagaggttgtgaaata 181994
to top
>emb|CR931808.2| Medicago truncatula chromosome 5 clone mth2-144o15, COMPLETE SEQUENCE
          Length = 124859

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 549   agaaaattgaattcataaca 568
             ||||||||||||||||||||
Sbjct: 82516 agaaaattgaattcataaca 82497
to top
>gb|AC149070.3| Xenopus tropicalis clone ISB1-185H2, complete sequence
          Length = 99046

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 140  ttttccttcactgataagag 159
            ||||||||||||||||||||
Sbjct: 9758 ttttccttcactgataagag 9777
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>gb|AC093560.2| Homo sapiens chromosome 1 clone RP11-398H19, complete sequence
          Length = 199594

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 547    aaagaaaattgaattcataa 566
              ||||||||||||||||||||
Sbjct: 190872 aaagaaaattgaattcataa 190853
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>gb|AC098685.7| Mus musculus clone ct7-393l21, complete sequence
          Length = 73632

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 383   ttgcagattgcttcaagcct 402
             ||||||||||||||||||||
Sbjct: 37228 ttgcagattgcttcaagcct 37247
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>gb|AC011260.8| Homo sapiens, clone RP11-1E21, complete sequence
          Length = 168476

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 547   aaagaaaattgaattcataa 566
             ||||||||||||||||||||
Sbjct: 56365 aaagaaaattgaattcataa 56346
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>gb|AC162374.4| Mus musculus BAC clone RP24-370I14 from chromosome 16, complete
             sequence
          Length = 157491

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 495   tggaatggttgtttcatcat 514
             ||||||||||||||||||||
Sbjct: 62178 tggaatggttgtttcatcat 62197
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>emb|CR390590.1| Gallus gallus finished cDNA, clone ChEST48k7
          Length = 606

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 269 tcactgagcaagaagaagat 288
           ||||||||||||||||||||
Sbjct: 68  tcactgagcaagaagaagat 87
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>dbj|AP006878.1| Thermococcus kodakarensis KOD1 DNA, complete genome
          Length = 2088737

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 542     gatggaaagaaaattgaattcata 565
               ||||||||||| ||||||||||||
Sbjct: 1160327 gatggaaagaatattgaattcata 1160304
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>dbj|BA000022.2| Synechocystis sp. PCC 6803 DNA, complete genome
          Length = 3573470

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 331    cattggtaattggattgcagatga 354
              |||||||||||||||||| |||||
Sbjct: 527295 cattggtaattggattgccgatga 527272
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>gb|AE017220.1| Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67,
               complete genome
          Length = 4755700

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 597     ccagaactgcagaagctgac 616
               ||||||||||||||||||||
Sbjct: 4463115 ccagaactgcagaagctgac 4463096
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>gb|AE017126.1| Prochlorococcus marinus subsp. marinus str. CCMP1375 complete genome
          Length = 1751080

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 290    ggaataaaagctcttttgctagat 313
              |||||||||||||||||| |||||
Sbjct: 789370 ggaataaaagctcttttgatagat 789347
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>gb|AC165261.3| Mus musculus BAC clone RP23-103O7 from chromosome 9, complete sequence
          Length = 201058

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 304   tttgctagatcagagcttca 323
             ||||||||||||||||||||
Sbjct: 92745 tttgctagatcagagcttca 92726
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>gb|AC139381.4| Mus musculus BAC clone RP23-171D1 from 13, complete sequence
          Length = 242105

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 433    aagcatccaagaggttgtga 452
              ||||||||||||||||||||
Sbjct: 197899 aagcatccaagaggttgtga 197880
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>gb|AC002070.1|HSAC002070 Human BAC clone 7E17 from 12q, complete sequence
          Length = 165197

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 200    gtacctccaatttctgagct 219
              ||||||||||||||||||||
Sbjct: 138699 gtacctccaatttctgagct 138680
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>emb|AJ296970.1|MMU296970 Mus musculus SDS-stable vimentin-bound DNA fragment MEF10VIMA4
          Length = 695

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 495 tggaatggttgtttcatcat 514
           ||||||||||||||||||||
Sbjct: 585 tggaatggttgtttcatcat 604
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>emb|AL844180.6| Mouse DNA sequence from clone RP23-403A4 on chromosome 4, complete
              sequence
          Length = 213870

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 383    ttgcagattgcttcaagcct 402
              ||||||||||||||||||||
Sbjct: 150087 ttgcagattgcttcaagcct 150106
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>emb|AL669959.22| Mouse DNA sequence from clone RP23-221H6 on chromosome 4, complete
              sequence
          Length = 213801

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 404    acaagggagagttgtgaagc 423
              ||||||||||||||||||||
Sbjct: 124093 acaagggagagttgtgaagc 124112


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,452,842
Number of Sequences: 3902068
Number of extensions: 5452842
Number of successful extensions: 100040
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 99732
Number of HSP's gapped (non-prelim): 304
length of query: 648
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 625
effective length of database: 17,143,297,704
effective search space: 10714561065000
effective search space used: 10714561065000
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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